Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE HISTOLOGICAL.TYPE PATHOLOGY.T PATHOLOGY.N PATHOLOGICSPREAD(M) TUMOR.STAGE RADIATIONS.RADIATION.REGIMENINDICATION NEOADJUVANT.THERAPY nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Amp Peak 1(1p34.2) 53 (17%) 254 0.34527 1 0.48563 1 0.016431 1 0.94191 1 0.073633 1 0.30488 1 0.5554 1 0.18683 1 0.18297 1 1 1 0.79748 1 Amp Peak 2(1q21.2) 166 (54%) 141 0.095263 1 0.52587 1 1 1 0.6879 1 0.21543 1 0.23953 1 0.8123 1 0.31193 1 0.55805 1 0.55671 1 0.56008 1 Amp Peak 3(2p16.1) 170 (55%) 137 0.9773 1 0.71986 1 0.11672 1 0.55484 1 0.20487 1 0.045395 1 0.0033491 1 0.35666 1 0.41072 1 0.75993 1 0.32675 1 Amp Peak 4(2q31.2) 107 (35%) 200 0.91508 1 0.56588 1 0.13328 1 0.73209 1 0.20684 1 0.94453 1 0.88381 1 0.87422 1 0.95019 1 0.34018 1 0.53935 1 Amp Peak 5(3p11.1) 62 (20%) 245 0.8897 1 0.38244 1 0.87142 1 0.59653 1 0.91984 1 0.49339 1 0.50092 1 0.43764 1 0.38528 1 0.049089 1 0.33047 1 Amp Peak 6(3q26.33) 280 (91%) 27 0.018767 1 0.66648 1 0.17531 1 0.9582 1 0.024007 1 0.79139 1 0.44804 1 1 1 0.41061 1 0.60743 1 0.15629 1 Amp Peak 7(4q12) 74 (24%) 233 0.23155 1 0.22383 1 1 1 0.36162 1 0.67989 1 0.4564 1 0.53574 1 0.27772 1 0.21851 1 1 1 0.6508 1 Amp Peak 8(5p15.33) 242 (79%) 65 0.62414 1 0.98614 1 0.63379 1 0.92806 1 0.34189 1 0.37618 1 0.0066787 1 0.12915 1 0.73701 1 1 1 1 1 Amp Peak 9(5p12) 203 (66%) 104 0.91956 1 0.063446 1 0.78542 1 0.57456 1 0.34139 1 0.05013 1 0.61361 1 0.57155 1 0.7769 1 0.75535 1 0.21758 1 Amp Peak 10(6q12) 88 (29%) 219 0.642 1 0.32579 1 0.88588 1 0.74995 1 0.19273 1 0.36751 1 0.12796 1 0.68927 1 0.19584 1 0.30529 1 0.39202 1 Amp Peak 11(7p11.2) 156 (51%) 151 0.13869 1 0.6941 1 0.36467 1 0.52857 1 0.37505 1 0.053967 1 0.11834 1 0.65648 1 0.077887 1 0.76711 1 0.69817 1 Amp Peak 12(7q21.2) 168 (55%) 139 0.32669 1 0.94453 1 0.0897 1 0.01539 1 0.51462 1 0.55058 1 0.050167 1 0.68728 1 0.31362 1 0.23389 1 0.55741 1 Amp Peak 13(8p11.23) 152 (50%) 155 0.099387 1 0.48863 1 0.051943 1 0.049201 1 0.53841 1 0.5109 1 0.91119 1 0.54331 1 0.3079 1 0.76845 1 0.010936 1 Amp Peak 14(8q24.21) 217 (71%) 90 0.656 1 0.67976 1 0.32025 1 0.38678 1 0.4036 1 0.018433 1 0.13976 1 0.17589 1 0.22384 1 1 1 0.05609 1 Amp Peak 15(9p24.1) 59 (19%) 248 0.24855 1 0.63439 1 0.62175 1 0.38491 1 0.022708 1 0.40627 1 0.61803 1 0.75495 1 0.35994 1 0.13172 1 0.22319 1 Amp Peak 16(9p13.3) 82 (27%) 225 0.19172 1 0.76049 1 0.46403 1 0.049763 1 0.14249 1 0.46373 1 0.70235 1 0.40952 1 0.9161 1 1 1 1 1 Amp Peak 17(11q13.3) 109 (36%) 198 0.461 1 0.37946 1 0.58733 1 0.3144 1 0.54636 1 0.11947 1 0.60731 1 0.81535 1 0.82248 1 0.33889 1 1 1 Amp Peak 18(12p13.33) 159 (52%) 148 0.85827 1 0.65769 1 0.068199 1 0.13816 1 0.53139 1 0.29934 1 0.12693 1 0.4738 1 0.43819 1 0.76372 1 0.077371 1 Amp Peak 19(12q15) 116 (38%) 191 0.6715 1 0.5754 1 0.060669 1 0.69551 1 0.53751 1 0.54748 1 0.71448 1 0.82726 1 0.42845 1 0.54357 1 0.42635 1 Amp Peak 20(13q34) 53 (17%) 254 0.23228 1 0.11069 1 0.085841 1 0.57707 1 0.010089 1 0.073458 1 0.25865 1 0.90148 1 0.61505 1 1 1 0.12646 1 Amp Peak 21(14q13.3) 98 (32%) 209 0.13647 1 0.00091691 0.756 1 1 0.91114 1 0.39339 1 0.11191 1 0.43491 1 0.28511 1 0.2232 1 1 1 0.53079 1 Amp Peak 22(15q26.3) 111 (36%) 196 0.84636 1 0.11397 1 0.3438 1 0.87731 1 0.5517 1 0.2855 1 0.66293 1 0.27776 1 0.75267 1 0.75168 1 0.5476 1 Amp Peak 23(17q25.1) 148 (48%) 159 0.89929 1 0.52649 1 0.027579 1 0.39528 1 0.5536 1 0.27751 1 0.093084 1 1 1 0.45008 1 0.12745 1 0.70142 1 Amp Peak 24(18p11.32) 107 (35%) 200 0.42596 1 0.27746 1 0.13328 1 0.60258 1 0.34198 1 0.38805 1 0.51415 1 0.71025 1 0.93711 1 0.52379 1 1 1 Amp Peak 25(18q11.2) 104 (34%) 203 0.91564 1 0.64163 1 0.68043 1 0.80604 1 0.51942 1 0.27506 1 0.31786 1 0.93296 1 0.47262 1 1 1 0.53946 1 Amp Peak 26(19q12) 131 (43%) 176 0.20849 1 0.53992 1 1 1 0.60621 1 0.26355 1 0.65764 1 0.047982 1 0.88447 1 0.54702 1 0.059687 1 1 1 Amp Peak 27(19q13.2) 138 (45%) 169 0.36218 1 0.38987 1 0.51367 1 0.32557 1 0.35016 1 0.40252 1 0.2591 1 0.78065 1 0.92939 1 0.069969 1 0.55687 1 Amp Peak 28(20q11.21) 182 (59%) 125 0.38557 1 0.2017 1 0.0079243 1 0.65422 1 0.1716 1 0.69518 1 0.043652 1 0.29579 1 0.86132 1 0.53453 1 0.4295 1 Amp Peak 29(22q11.21) 153 (50%) 154 0.76498 1 0.29556 1 0.2421 1 0.47474 1 0.15544 1 0.43253 1 0.10763 1 0.23708 1 0.063585 1 0.54133 1 0.5649 1 Amp Peak 30(Xq28) 83 (27%) 224 0.30192 1 0.28148 1 0.66374 1 0.1921 1 0.48556 1 0.015835 1 0.29315 1 0.85074 1 0.62213 1 0.29942 1 0.66121 1 Del Peak 1(1p36.32) 136 (44%) 171 0.64646 1 0.25736 1 0.066549 1 0.45388 1 0.4321 1 0.50716 1 0.3058 1 0.17056 1 0.96508 1 0.54625 1 0.69703 1 Del Peak 2(1p13.2) 134 (44%) 173 0.9519 1 0.10004 1 0.23814 1 0.25021 1 0.5843 1 0.30725 1 0.76622 1 0.15636 1 0.9259 1 0.35908 1 0.84618 1 Del Peak 3(2q22.1) 80 (26%) 227 0.96926 1 0.0024705 1 0.30073 1 0.55831 1 0.074863 1 0.66844 1 0.19832 1 0.62522 1 0.37882 1 0.29944 1 0.37334 1 Del Peak 4(2q36.2) 99 (32%) 208 0.24132 1 0.0076093 1 0.33146 1 0.72852 1 0.54172 1 0.97822 1 0.60026 1 0.80852 1 0.86164 1 0.34136 1 0.67878 1 Del Peak 5(3p25.3) 244 (79%) 63 0.45014 1 0.42083 1 0.52056 1 0.48905 1 0.33592 1 0.15033 1 0.16736 1 0.55191 1 0.045484 1 0.47124 1 0.33594 1 Del Peak 6(3p13) 262 (85%) 45 0.81999 1 0.2633 1 1 1 0.10211 1 0.18651 1 0.07149 1 0.88989 1 0.20798 1 0.0033326 1 0.37765 1 0.16277 1 Del Peak 7(3p12.1) 234 (76%) 73 0.5713 1 0.31077 1 0.13031 1 0.16841 1 0.41621 1 0.12374 1 0.53784 1 0.27772 1 0.39333 1 1 1 0.17066 1 Del Peak 8(4p15.31) 189 (62%) 118 0.16104 1 0.50306 1 0.42341 1 0.53348 1 0.57325 1 0.71735 1 0.79371 1 0.88327 1 0.66273 1 0.54009 1 0.42935 1 Del Peak 9(4q22.1) 175 (57%) 132 0.033907 1 0.30937 1 0.18914 1 0.74456 1 0.49129 1 0.43189 1 0.28368 1 0.49405 1 0.061677 1 0.12316 1 0.23666 1 Del Peak 10(4q32.3) 196 (64%) 111 0.29146 1 0.3431 1 0.2233 1 0.88672 1 0.37171 1 0.17355 1 0.17951 1 0.8192 1 0.089013 1 0.75168 1 0.41713 1 Del Peak 11(4q35.2) 197 (64%) 110 0.69908 1 0.95781 1 0.68609 1 0.71127 1 0.36444 1 0.21433 1 0.11217 1 0.76525 1 0.067659 1 0.75181 1 0.68565 1 Del Peak 12(5q11.2) 224 (73%) 83 0.46586 1 0.14683 1 0.37979 1 0.8769 1 0.21418 1 0.72929 1 0.36374 1 0.58599 1 0.33814 1 0.29942 1 0.51378 1 Del Peak 13(5q31.1) 231 (75%) 76 0.18193 1 0.69326 1 0.45312 1 0.65333 1 0.2903 1 0.97698 1 0.66276 1 0.77596 1 0.23492 1 0.30381 1 0.1797 1 Del Peak 14(6p25.3) 82 (27%) 225 0.12283 1 0.91181 1 0.077352 1 0.44213 1 0.47985 1 0.81562 1 0.61132 1 0.72942 1 0.14992 1 0.7334 1 1 1 Del Peak 15(6q26) 84 (27%) 223 0.281 1 0.41426 1 0.6625 1 0.23685 1 0.491 1 0.94436 1 0.74924 1 0.21315 1 0.78779 1 0.50009 1 0.38446 1 Del Peak 16(7q11.22) 31 (10%) 276 0.32563 1 0.67421 1 0.67053 1 0.53819 1 0.97615 1 0.87187 1 0.68172 1 0.56751 1 0.50737 1 0.30685 1 0.33326 1 Del Peak 17(7q36.1) 66 (21%) 241 0.33359 1 0.04629 1 1 1 0.30975 1 0.90529 1 0.73824 1 0.42066 1 0.62597 1 0.29771 1 0.25872 1 0.47502 1 Del Peak 18(8p23.2) 213 (69%) 94 0.96083 1 0.064683 1 0.88861 1 0.15061 1 0.23743 1 0.281 1 0.22688 1 0.0082396 1 0.13435 1 1 1 0.83366 1 Del Peak 19(9p23) 193 (63%) 114 0.54329 1 0.18338 1 0.10647 1 0.39397 1 0.26235 1 0.34759 1 0.60223 1 0.93898 1 0.52245 1 1 1 0.22654 1 Del Peak 20(9p21.3) 227 (74%) 80 0.54026 1 0.25954 1 0.038752 1 0.23486 1 0.045062 1 0.56859 1 0.25699 1 1 1 0.5754 1 0.48548 1 1 1 Del Peak 21(9q21.11) 143 (47%) 164 0.92525 1 0.013153 1 0.15237 1 0.63707 1 0.56866 1 0.6715 1 0.82334 1 0.2903 1 0.90384 1 0.23034 1 0.17817 1 Del Peak 22(10p15.3) 138 (45%) 169 0.34065 1 0.81425 1 0.23945 1 0.68688 1 0.30071 1 0.95918 1 0.96694 1 0.22413 1 0.37768 1 0.55091 1 1 1 Del Peak 23(10q23.31) 155 (50%) 152 0.35676 1 0.48647 1 0.19351 1 0.77976 1 0.53841 1 0.47159 1 0.59667 1 0.090959 1 0.054711 1 0.37502 1 0.43625 1 Del Peak 24(11p15.5) 143 (47%) 164 0.22593 1 0.71014 1 0.29811 1 0.12635 1 0.47728 1 0.083314 1 0.68708 1 0.075126 1 0.10346 1 0.35759 1 0.3369 1 Del Peak 25(11q22.1) 88 (29%) 219 0.65964 1 0.28545 1 0.31446 1 0.57434 1 0.4056 1 0.85631 1 0.098417 1 0.78816 1 0.88967 1 0.51794 1 1 1 Del Peak 26(11q25) 115 (37%) 192 0.71043 1 0.88334 1 0.50209 1 0.55854 1 0.39958 1 0.71227 1 0.20773 1 0.47226 1 0.82922 1 0.75245 1 0.84126 1 Del Peak 27(12q24.32) 50 (16%) 257 0.11997 1 0.32519 1 0.37856 1 0.60611 1 0.054186 1 0.69686 1 0.98731 1 0.89044 1 0.54157 1 1 1 0.03342 1 Del Peak 28(13q12.11) 206 (67%) 101 0.24918 1 0.86518 1 0.78265 1 0.57553 1 0.50226 1 0.51676 1 0.70052 1 0.20599 1 0.1862 1 1 1 0.67846 1 Del Peak 29(13q14.2) 215 (70%) 92 0.74704 1 0.37012 1 0.048546 1 0.96859 1 0.22103 1 0.25216 1 0.96553 1 0.15185 1 0.22623 1 1 1 0.53043 1 Del Peak 30(14q11.2) 109 (36%) 198 0.21276 1 0.58926 1 0.34383 1 0.54524 1 0.54358 1 0.4239 1 0.96998 1 0.33761 1 0.31626 1 1 1 0.6863 1 Del Peak 31(15q12) 103 (34%) 204 0.52171 1 0.17354 1 0.09941 1 0.21499 1 0.54616 1 0.4687 1 0.11189 1 0.6136 1 0.14255 1 0.51645 1 0.54073 1 Del Peak 32(16p13.3) 108 (35%) 199 0.10756 1 0.34711 1 0.68318 1 0.8883 1 0.076708 1 0.68571 1 0.44007 1 1 1 0.97525 1 0.75247 1 0.3071 1 Del Peak 33(16q23.1) 120 (39%) 187 0.18528 1 0.33288 1 0.23131 1 0.36817 1 0.7397 1 0.72489 1 0.78211 1 0.11018 1 0.31898 1 0.7562 1 0.16351 1 Del Peak 34(17p11.2) 158 (51%) 149 0.30131 1 0.43723 1 0.43684 1 0.15312 1 0.38084 1 0.74264 1 0.44844 1 0.88022 1 0.9954 1 0.061957 1 0.17108 1 Del Peak 35(17q11.2) 72 (23%) 235 0.83177 1 0.31028 1 0.35772 1 7.0917e-06 0.00585 0.37877 1 0.56932 1 0.079809 1 0.53572 1 0.13027 1 1 1 1 1 Del Peak 36(17q25.3) 57 (19%) 250 0.5033 1 0.34364 1 0.86793 1 0.86115 1 0.88661 1 0.61887 1 0.74065 1 0.31256 1 1 1 0.43442 1 0.80182 1 Del Peak 37(18q23) 138 (45%) 169 0.42577 1 0.037573 1 0.025943 1 0.69244 1 0.23085 1 0.25938 1 0.71816 1 0.94103 1 0.94074 1 1 1 0.84486 1 Del Peak 38(19p13.3) 137 (45%) 170 0.22983 1 0.50957 1 0.36166 1 0.14039 1 0.50886 1 0.95903 1 0.10255 1 0.60244 1 0.13765 1 0.75993 1 0.69872 1 Del Peak 39(19q13.33) 81 (26%) 226 0.40153 1 0.03888 1 0.24181 1 0.43495 1 0.34053 1 1 1 0.45296 1 0.67148 1 0.87788 1 0.4888 1 0.2769 1 Del Peak 40(21q21.1) 152 (50%) 155 0.38472 1 0.54895 1 0.027508 1 0.86466 1 0.53841 1 0.52216 1 0.89306 1 0.50758 1 0.59791 1 0.54153 1 0.049793 1 Del Peak 41(21q22.3) 175 (57%) 132 0.65104 1 0.48915 1 0.012882 1 0.9667 1 0.4037 1 0.73541 1 0.81125 1 0.59741 1 0.17169 1 1 1 0.56022 1 Del Peak 42(22q11.21) 55 (18%) 252 0.89238 1 0.13632 1 0.61183 1 0.8817 1 0.27898 1 0.90591 1 0.30925 1 0.21056 1 0.20025 1 0.42202 1 0.3201 1 Del Peak 43(Xp21.1) 98 (32%) 209 0.26503 1 0.7232 1 0.26439 1 0.039326 1 0.39339 1 0.16168 1 0.030678 1 0.92854 1 0.91725 1 1 1 0.67965 1 Del Peak 44(Xp11.3) 97 (32%) 210 0.76949 1 0.49534 1 0.40302 1 0.014344 1 0.53815 1 0.17784 1 0.10748 1 0.92812 1 0.9032 1 1 1 0.40937 1 Del Peak 45(Xq22.3) 78 (25%) 229 0.84442 1 0.49307 1 0.45632 1 0.1146 1 0.45429 1 0.86216 1 0.2086 1 0.84566 1 0.62104 1 1 1 0.65717 1