Clinical Features	Time to Death		AGE		PRIMARY.SITE.OF.DISEASE		KARNOFSKY.PERFORMANCE.SCORE		TUMOR.STAGE		RADIATIONS.RADIATION.REGIMENINDICATION		NEOADJUVANT.THERAPY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
Amp Peak  1(1p34.3)	277 (50%)	277	0.038781	1	0.011986	1	1	1	0.98496	1	0.88847	1	0.24864	1	0.74424	1
Amp Peak  2(1q21.3)	348 (63%)	206	0.27687	1	5.853e-06	0.00284	0.12822	1	0.40756	1	0.76682	1	1	1	0.73676	1
Amp Peak  3(1q42.2)	298 (54%)	256	0.32223	1	0.00050514	0.242	0.25197	1	0.7365	1	0.17546	1	0.59806	1	1	1
Amp Peak  4(2p23.2)	231 (42%)	323	0.94835	1	0.07605	1	0.76279	1	0.98836	1	0.38412	1	1	1	1	1
Amp Peak  5(2q31.2)	244 (44%)	310	0.19151	1	0.010971	1	0.75619	1	0.69254	1	0.0063844	1	0.084847	1	0.8269	1
Amp Peak  6(3q26.2)	460 (83%)	94	0.97815	1	0.0009315	0.444	0.52573	1	0.001308	0.623	0.053439	1	1	1	0.77189	1
Amp Peak  7(4p16.3)	152 (27%)	402	0.47417	1	0.60659	1	0.72389	1	0.07285	1	0.83353	1	1	1	0.32924	1
Amp Peak  8(4q13.3)	105 (19%)	449	0.21224	1	0.1963	1	0.56963	1	0.41975	1	0.39471	1	1	1	0.49086	1
Amp Peak  9(5p15.33)	293 (53%)	261	0.047896	1	0.0021485	1	0.75077	1	0.79795	1	0.29537	1	0.60387	1	0.44564	1
Amp Peak 10(6p22.3)	283 (51%)	271	0.14682	1	0.0068185	1	1	1	0.5448	1	0.051305	1	0.61634	1	1	1
Amp Peak 11(7q36.3)	297 (54%)	257	0.31362	1	0.80122	1	1	1	0.10005	1	0.73953	1	0.5992	1	0.74389	1
Amp Peak 12(8p11.21)	197 (36%)	357	0.35256	1	0.00043284	0.208	0.121	1	0.66216	1	0.31398	1	0.28906	1	0.90959	1
Amp Peak 13(8q24.21)	435 (79%)	119	0.52618	1	0.092707	1	1	1	0.62757	1	0.18238	1	0.51662	1	0.50815	1
Amp Peak 14(10p15.3)	238 (43%)	316	0.14006	1	0.00034088	0.164	0.15408	1	0.92261	1	0.22806	1	0.57974	1	0.12388	1
Amp Peak 15(10q22.3)	173 (31%)	381	0.49867	1	0.20514	1	0.092504	1	0.98882	1	0.73603	1	1	1	0.5588	1
Amp Peak 16(11q14.1)	245 (44%)	309	0.32209	1	0.38203	1	0.25579	1	0.47437	1	0.050344	1	1	1	0.19094	1
Amp Peak 17(12p13.33)	309 (56%)	245	0.73952	1	5.4058e-07	0.000264	0.75577	1	0.73474	1	0.094423	1	1	1	0.049632	1
Amp Peak 18(12p12.1)	294 (53%)	260	0.083622	1	2.0766e-08	1.02e-05	0.25098	1	0.33477	1	0.031574	1	0.60268	1	0.063742	1
Amp Peak 19(14q11.2)	140 (25%)	414	0.77771	1	0.059561	1	0.12309	1	0.37817	1	0.091845	1	1	1	0.3811	1
Amp Peak 20(15q26.3)	153 (28%)	401	0.066952	1	0.30394	1	0.72664	1	0.41962	1	0.14279	1	0.56465	1	0.010279	1
Amp Peak 21(17q25.3)	203 (37%)	351	0.025442	1	0.86113	1	1	1	0.68542	1	0.38172	1	1	1	0.17718	1
Amp Peak 22(18q11.2)	134 (24%)	420	0.99671	1	0.040143	1	0.11304	1	0.17994	1	0.85414	1	0.56502	1	0.25253	1
Amp Peak 23(19p13.12)	301 (54%)	253	0.21872	1	0.083276	1	0.45963	1	0.59701	1	0.11536	1	0.59472	1	0.18984	1
Amp Peak 24(19q12)	307 (55%)	247	0.56573	1	1.6598e-05	0.00802	0.1615	1	0.51038	1	0.10183	1	1	1	0.028318	1
Amp Peak 25(19q13.2)	233 (42%)	321	0.017225	1	5.7439e-06	0.0028	0.15	1	0.98882	1	0.64567	1	0.57542	1	0.077927	1
Amp Peak 26(20p13)	300 (54%)	254	0.29936	1	0.0095331	1	0.75255	1	0.10999	1	0.0021234	1	1	1	1	1
Amp Peak 27(20q11.21)	324 (58%)	230	0.095447	1	1.1191e-07	5.47e-05	1	1	0.26442	1	0.080869	1	1	1	0.027214	1
Amp Peak 28(20q13.33)	385 (69%)	169	0.31907	1	1.2093e-05	0.00585	1	1	0.75229	1	0.53771	1	1	1	0.19471	1
Amp Peak 29(22q12.2)	89 (16%)	465	0.53887	1	0.021525	1	1	1	0.41922	1	0.43775	1	1	1	0.88345	1
Amp Peak 30(Xp11.23)	162 (29%)	392	0.15374	1	0.019884	1	0.077344	1	0.27522	1	0.36176	1	0.55952	1	0.72046	1
Amp Peak 31(Xq28)	221 (40%)	333	0.39332	1	0.96234	1	0.76926	1	0.65424	1	0.0018401	0.874	0.062963	1	0.65694	1
Del Peak  1(1p36.11)	261 (47%)	293	0.18564	1	0.16238	1	0.75077	1	0.42681	1	0.49352	1	1	1	0.91326	1
Del Peak  2(1q32.3)	89 (16%)	465	0.94305	1	0.56421	1	1	1	0.287	1	0.41457	1	0.40929	1	0.46272	1
Del Peak  3(2p25.3)	117 (21%)	437	0.89646	1	0.40359	1	0.61397	1	0.87498	1	0.056598	1	0.5099	1	0.6897	1
Del Peak  4(2q22.1)	130 (23%)	424	0.21109	1	0.46354	1	0.65804	1	0.59544	1	0.34503	1	1	1	0.054985	1
Del Peak  5(2q37.3)	171 (31%)	383	0.61891	1	0.084298	1	0.36349	1	0.43156	1	0.8056	1	0.22656	1	0.40971	1
Del Peak  6(3p26.2)	204 (37%)	350	0.83782	1	0.0035664	1	0.12662	1	0.24583	1	0.13248	1	0.049466	1	0.7355	1
Del Peak  7(4q22.1)	370 (67%)	184	0.46828	1	0.96692	1	1	1	0.92539	1	0.044309	1	1	1	0.16538	1
Del Peak  8(4q34.3)	401 (72%)	153	0.82671	1	0.3389	1	0.72664	1	0.1711	1	0.80864	1	0.56465	1	0.3304	1
Del Peak  9(5q11.2)	330 (60%)	224	0.76405	1	0.67637	1	0.76719	1	0.32514	1	0.23583	1	0.56858	1	0.096027	1
Del Peak 10(5q13.2)	393 (71%)	161	0.27249	1	0.96539	1	0.74789	1	0.21637	1	0.86611	1	0.20381	1	0.11923	1
Del Peak 11(6q27)	367 (66%)	187	0.32228	1	0.00058078	0.278	1	1	0.50848	1	0.37201	1	1	1	0.73009	1
Del Peak 12(7p22.1)	241 (44%)	313	0.083302	1	0.035049	1	0.75753	1	0.49672	1	0.97104	1	1	1	1	1
Del Peak 13(8p23.3)	372 (67%)	182	0.24306	1	0.051229	1	1	1	0.95041	1	0.90112	1	1	1	0.48923	1
Del Peak 14(8p21.2)	388 (70%)	166	0.64737	1	0.071595	1	1	1	0.64693	1	0.53461	1	1	1	1	1
Del Peak 15(9p24.3)	246 (44%)	308	0.98203	1	0.021043	1	0.44981	1	0.92791	1	0.40028	1	0.58736	1	0.32471	1
Del Peak 16(9q21.11)	268 (48%)	286	0.63424	1	6.1721e-06	0.00299	0.054131	1	0.6337	1	0.0039716	1	1	1	0.23206	1
Del Peak 17(9q34.13)	330 (60%)	224	0.82682	1	0.032613	1	0.76719	1	0.62301	1	0.86506	1	0.27615	1	0.91178	1
Del Peak 18(10p15.3)	111 (20%)	443	0.43656	1	0.86538	1	0.59225	1	0.80937	1	0.36238	1	0.48939	1	1	1
Del Peak 19(10q23.31)	214 (39%)	340	0.30865	1	0.92801	1	1	1	0.39299	1	0.62803	1	0.56244	1	0.074185	1
Del Peak 20(10q26.3)	187 (34%)	367	0.078787	1	0.88868	1	0.79944	1	0.77021	1	0.34377	1	1	1	0.25234	1
Del Peak 21(11p15.5)	329 (59%)	225	0.045165	1	0.62801	1	0.026777	1	0.26732	1	0.68449	1	1	1	0.58013	1
Del Peak 22(11q25)	192 (35%)	362	0.55094	1	0.10116	1	0.22527	1	0.6305	1	0.076782	1	0.2767	1	0.56772	1
Del Peak 23(12q23.1)	189 (34%)	365	0.30384	1	0.011258	1	0.79735	1	0.3997	1	0.26517	1	1	1	0.10777	1
Del Peak 24(12q24.33)	208 (38%)	346	0.61358	1	0.092892	1	0.12983	1	0.65197	1	0.54883	1	0.29527	1	0.11742	1
Del Peak 25(13q14.2)	344 (62%)	210	0.077977	1	0.52602	1	0.77769	1	0.59232	1	0.76996	1	0.56044	1	0.21894	1
Del Peak 26(14q23.2)	291 (53%)	263	0.70304	1	0.50296	1	0.47503	1	0.04232	1	0.3191	1	0.10635	1	0.51368	1
Del Peak 27(15q15.1)	348 (63%)	206	0.71228	1	0.0044419	1	0.41161	1	0.25272	1	0.029411	1	0.29801	1	0.43258	1
Del Peak 28(16p13.3)	293 (53%)	261	0.92679	1	0.94069	1	0.75077	1	0.57764	1	0.20914	1	0.60387	1	0.91326	1
Del Peak 29(16q22.1)	439 (79%)	115	0.62454	1	0.0055655	1	0.19202	1	0.27537	1	0.53736	1	1	1	0.78856	1
Del Peak 30(16q23.1)	431 (78%)	123	0.1526	1	9.0591e-05	0.0437	0.63481	1	0.077815	1	0.12367	1	1	1	0.1935	1
Del Peak 31(17p12)	468 (84%)	86	0.81313	1	0.99479	1	0.49175	1	0.73023	1	0.010967	1	1	1	1	1
Del Peak 32(17q11.2)	452 (82%)	102	0.72935	1	0.030727	1	0.066159	1	0.68639	1	0.24642	1	1	1	0.06731	1
Del Peak 33(18q23)	361 (65%)	193	0.70108	1	0.83409	1	0.22748	1	0.54379	1	0.70549	1	1	1	0.1378	1
Del Peak 34(19p13.3)	485 (88%)	69	0.24388	1	0.011087	1	1	1	0.008327	1	0.06725	1	1	1	0.74226	1
Del Peak 35(19q13.33)	288 (52%)	266	0.64146	1	0.39099	1	1	1	0.31129	1	0.35797	1	0.24983	1	0.32717	1
Del Peak 36(19q13.43)	274 (49%)	280	0.41891	1	0.038071	1	1	1	0.28294	1	0.2638	1	1	1	0.23334	1
Del Peak 37(21q22.3)	214 (39%)	340	0.55599	1	0.32313	1	0.77447	1	0.66531	1	0.12648	1	1	1	0.57664	1
Del Peak 38(22q13.32)	478 (86%)	76	0.74737	1	0.74399	1	0.44675	1	0.75231	1	0.5653	1	1	1	0.87431	1
Del Peak 39(Xp21.1)	354 (64%)	200	0.80793	1	0.34215	1	1	1	0.98653	1	0.6711	1	0.55664	1	0.31089	1