
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_TopgenesforCluster.35.3911/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_TopgenesforCluster.35.3911/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/KICH-TP/2299589/0.GDAC_MethylationPreprocess.Finished/KICH-TP.meth.for_clustering.filtered_data.txt", "-u11501", "-ooutputprefix")
Cluster size 11501 broken into 6198 5303 
Cluster size 6198 broken into 2984 3214 
Cluster size 2984 broken into 1202 1782 
Done cluster 1202 
Cluster size 1782 broken into 1059 723 
Done cluster 1059 
Done cluster 723 
Done cluster 1782 
Done cluster 2984 
Cluster size 3214 broken into 1597 1617 
Cluster size 1597 broken into 757 840 
Done cluster 757 
Done cluster 840 
Done cluster 1597 
Cluster size 1617 broken into 807 810 
Done cluster 807 
Done cluster 810 
Done cluster 1617 
Done cluster 3214 
Done cluster 6198 
Cluster size 5303 broken into 1937 3366 
Cluster size 1937 broken into 1092 845 
Done cluster 1092 
Done cluster 845 
Done cluster 1937 
Cluster size 3366 broken into 2023 1343 
Cluster size 2023 broken into 642 1381 
Done cluster 642 
Done cluster 1381 
Done cluster 2023 
Done cluster 1343 
Done cluster 3366 
Done cluster 5303 
> q(save="no")
