Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		NUMBERPACKYEARSSMOKED		STOPPEDSMOKINGYEAR		TOBACCOSMOKINGHISTORYINDICATOR	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q
1p gain	12 (11%)	93	0.13448	1	0.31942	1	1	1	0.29299	1	0.53938	1	0.56231	1	0.17878	1
1q gain	21 (20%)	84	0.024552	1	0.015334	1	1	1	0.14474	1	0.68426	1	0.099797	1	0.024561	1
2p gain	22 (21%)	83	0.34661	1	0.78696	1	0.00076208	0.365	0.34984	1	0.74031	1	0.010855	1	0.62507	1
2q gain	8 (8%)	97	0.59303	1	0.37958	1	0.68166	1	0.56233	1	0.45567	1	0.0023185	1	0.59901	1
3p gain	22 (21%)	83	0.4186	1	0.69747	1	0.29902	1	0.5813	1	0.6563	1	0.79386	1	0.92626	1
3q gain	30 (29%)	75	0.12477	1	0.058442	1	0.22923	1	0.9497	1	0.67746	1	0.34675	1	0.87986	1
4p gain	8 (8%)	97	0.065515	1	0.89898	1	0.43954	1	NA	NA	0.2721	1	0.99824	1	0.63906	1
4q gain	3 (3%)	102	0.28784	1	0.48152	1	1	1	NA	NA	0.22834	1	NA	NA	0.91494	1
5p gain	31 (30%)	74	0.62676	1	0.15098	1	0.63276	1	0.047765	1	0.66988	1	0.50116	1	0.57172	1
5q gain	14 (13%)	91	0.30107	1	0.25613	1	0.34041	1	0.30608	1	0.61634	1	0.53771	1	0.70332	1
6p gain	6 (6%)	99	0.084058	1	0.79458	1	0.66709	1	NA	NA	0.70336	1	0.5875	1	0.6708	1
6q gain	4 (4%)	101	0.088661	1	0.98903	1	0.57351	1	NA	NA	0.87687	1	0.96051	1	0.07141	1
7p gain	31 (30%)	74	0.37578	1	0.54774	1	0.48484	1	0.31129	1	0.76789	1	0.89866	1	0.21015	1
7q gain	32 (30%)	73	0.70541	1	0.70187	1	0.059795	1	0.31194	1	0.2056	1	0.75504	1	0.38855	1
8p gain	14 (13%)	91	0.99326	1	0.21264	1	0.7529	1	0.74542	1	0.14326	1	0.05473	1	0.13871	1
8q gain	31 (30%)	74	0.54406	1	0.41957	1	1	1	0.45207	1	0.36581	1	0.49767	1	0.83103	1
9p gain	13 (12%)	92	0.021978	1	0.030817	1	0.10652	1	0.9067	1	0.053136	1	0.67689	1	0.1023	1
9q gain	10 (10%)	95	0.060755	1	0.14089	1	1	1	0.74522	1	0.12602	1	0.43386	1	0.64333	1
10p gain	22 (21%)	83	0.40992	1	0.88289	1	1	1	0.61955	1	0.51218	1	0.42958	1	0.73389	1
10q gain	6 (6%)	99	0.43489	1	0.2238	1	0.66709	1	NA	NA	NA	NA	0.38303	1	0.96977	1
11p gain	5 (5%)	100	0.094075	1	0.22309	1	0.3191	1	0.11355	1	0.53021	1	NA	NA	0.43721	1
11q gain	6 (6%)	99	0.40568	1	0.48297	1	0.18381	1	0.74522	1	0.87758	1	NA	NA	0.9072	1
12p gain	20 (19%)	85	0.82037	1	0.94221	1	1	1	0.47231	1	0.76069	1	0.43376	1	0.62059	1
12q gain	17 (16%)	88	0.2622	1	0.53893	1	0.14388	1	0.28509	1	0.74126	1	0.38996	1	0.93104	1
13q gain	18 (17%)	87	0.38036	1	0.62604	1	1	1	0.38772	1	0.28233	1	0.91568	1	0.78269	1
14q gain	10 (10%)	95	0.59204	1	0.88225	1	0.45772	1	0.40275	1	0.27918	1	0.58498	1	0.40783	1
15q gain	4 (4%)	101	0.1129	1	0.78822	1	1	1	NA	NA	NA	NA	NA	NA	0.47867	1
16p gain	9 (9%)	96	0.0012499	0.597	0.43393	1	0.25683	1	0.58266	1	0.20646	1	NA	NA	0.31721	1
16q gain	11 (10%)	94	0.028485	1	0.3106	1	0.06758	1	0.44581	1	0.38948	1	0.87343	1	0.2848	1
17p gain	8 (8%)	97	0.52045	1	0.96658	1	0.68166	1	NA	NA	0.77765	1	0.59577	1	0.99757	1
17q gain	18 (17%)	87	0.61574	1	0.45746	1	0.56998	1	0.29299	1	0.46933	1	0.56521	1	0.37659	1
18p gain	20 (19%)	85	0.72845	1	0.82895	1	0.41626	1	0.7123	1	0.26117	1	0.39644	1	0.12895	1
18q gain	7 (7%)	98	0.051909	1	0.86298	1	1	1	NA	NA	0.68096	1	0.54194	1	0.2193	1
19p gain	12 (11%)	93	0.8721	1	0.78952	1	1	1	0.34984	1	0.49255	1	0.68417	1	0.7472	1
19q gain	25 (24%)	80	0.17273	1	0.76466	1	0.61275	1	0.063942	1	0.20442	1	0.52789	1	0.24164	1
20p gain	42 (40%)	63	0.67067	1	0.73251	1	0.18102	1	0.73443	1	0.16736	1	0.29119	1	0.86622	1
20q gain	43 (41%)	62	0.4603	1	0.62638	1	1	1	0.60254	1	0.077072	1	0.28053	1	0.10619	1
21q gain	20 (19%)	85	0.3147	1	0.14335	1	0.7862	1	0.75319	1	0.37215	1	0.56044	1	0.91441	1
22q gain	10 (10%)	95	0.066328	1	0.48254	1	0.72309	1	0.7123	1	0.26012	1	0.068075	1	0.011512	1
Xq gain	6 (6%)	99	0.60007	1	0.61762	1	0.66709	1	NA	NA	0.34897	1	NA	NA	0.5043	1
2p loss	6 (6%)	99	0.65157	1	0.80139	1	1	1	0.80587	1	0.24403	1	0.93575	1	0.42454	1
2q loss	13 (12%)	92	0.03967	1	0.7119	1	0.50783	1	0.80587	1	0.21453	1	0.89029	1	0.52988	1
3p loss	7 (7%)	98	0.97497	1	0.66697	1	0.3919	1	NA	NA	0.083218	1	0.89012	1	0.013165	1
4p loss	18 (17%)	87	0.54245	1	0.94195	1	0.56998	1	0.038058	1	0.66118	1	0.86416	1	0.99621	1
4q loss	17 (16%)	88	0.74697	1	0.63189	1	1	1	0.038058	1	0.78519	1	0.23763	1	0.91457	1
5p loss	11 (10%)	94	0.31229	1	0.18219	1	0.17178	1	0.0019039	0.902	0.9662	1	0.1996	1	0.17391	1
5q loss	25 (24%)	80	0.55095	1	0.44945	1	0.79926	1	0.53392	1	0.070744	1	0.52637	1	0.11389	1
6p loss	14 (13%)	91	0.98429	1	0.80697	1	0.52481	1	0.0019039	0.902	0.7584	1	0.89565	1	0.42025	1
6q loss	23 (22%)	82	0.31198	1	0.66308	1	0.79366	1	0.0016458	0.785	0.19947	1	0.23094	1	0.01016	1
8p loss	34 (32%)	71	0.083	1	0.96931	1	0.64254	1	0.23185	1	0.46951	1	0.24769	1	0.75249	1
8q loss	4 (4%)	101	0.5458	1	0.12542	1	0.30512	1	NA	NA	0.87026	1	0.64913	1	0.85243	1
9p loss	34 (32%)	71	0.75394	1	0.51021	1	0.16157	1	0.82172	1	0.377	1	0.30739	1	0.30225	1
9q loss	31 (30%)	74	0.6507	1	0.82706	1	0.099988	1	0.70128	1	0.17793	1	0.79338	1	0.3181	1
10p loss	15 (14%)	90	0.547	1	0.96677	1	1	1	0.038058	1	0.51442	1	0.80817	1	0.036099	1
10q loss	19 (18%)	86	0.53284	1	0.13621	1	1	1	0.0018244	0.868	0.36542	1	0.87495	1	0.11487	1
11p loss	35 (33%)	70	0.44544	1	0.21022	1	0.64412	1	0.058588	1	0.7366	1	0.5785	1	0.71317	1
11q loss	26 (25%)	79	0.8434	1	0.61774	1	1	1	0.48146	1	0.25373	1	0.84415	1	0.73635	1
12p loss	4 (4%)	101	0.97543	1	0.50011	1	0.57351	1	NA	NA	0.71687	1	NA	NA	0.042163	1
12q loss	6 (6%)	99	0.13246	1	0.35112	1	0.18381	1	NA	NA	0.98805	1	0.90176	1	0.33982	1
13q loss	15 (14%)	90	0.79413	1	0.66268	1	0.22673	1	0.0019776	0.933	0.67712	1	0.46099	1	0.015452	1
14q loss	16 (15%)	89	0.22755	1	0.26092	1	0.54744	1	0.9067	1	0.040078	1	0.038221	1	0.75907	1
15q loss	14 (13%)	91	0.19063	1	0.78864	1	0.52481	1	0.88291	1	0.75357	1	0.89315	1	0.25152	1
16p loss	12 (11%)	93	0.38216	1	0.29536	1	0.1722	1	0.14474	1	0.58056	1	0.87792	1	0.019595	1
16q loss	13 (12%)	92	0.8172	1	0.45469	1	0.50783	1	0.28768	1	0.78229	1	0.23632	1	0.00051557	0.247
17p loss	32 (30%)	73	0.22337	1	0.72145	1	1	1	0.43856	1	0.27788	1	0.72244	1	0.72545	1
17q loss	4 (4%)	101	0.80347	1	0.58758	1	1	1	NA	NA	NA	NA	NA	NA	0.66336	1
18p loss	15 (14%)	90	0.11278	1	0.059067	1	0.75562	1	0.66807	1	0.54813	1	0.25077	1	0.57481	1
18q loss	29 (28%)	76	0.017821	1	0.066295	1	0.15251	1	0.78959	1	0.60501	1	0.12723	1	0.21498	1
19p loss	7 (7%)	98	0.9469	1	0.78116	1	1	1	NA	NA	0.30439	1	0.19334	1	0.48338	1
19q loss	4 (4%)	101	0.3453	1	0.71004	1	0.57351	1	NA	NA	NA	NA	NA	NA	0.3797	1
20p loss	4 (4%)	101	0.90635	1	0.22115	1	1	1	NA	NA	0.034779	1	0.10217	1	0.6678	1
21q loss	11 (10%)	94	0.59287	1	0.00039265	0.189	1	1	0.0018244	0.868	0.82297	1	0.19134	1	0.71955	1
22q loss	22 (21%)	83	0.20338	1	0.89445	1	0.60287	1	0.29794	1	0.70669	1	0.8831	1	0.1228	1