Clinical Features	Time to Death		AGE		GENDER		PATHOLOGY.T		PATHOLOGY.N		TUMOR.STAGE		RADIATIONS.RADIATION.REGIMENINDICATION		NUMBERPACKYEARSSMOKED		STOPPEDSMOKINGYEAR		TOBACCOSMOKINGHISTORYINDICATOR		YEAROFTOBACCOSMOKINGONSET	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q
Amp Peak  1(1q21.2)	70 (23%)	235	0.40283	1	0.11081	1	0.64804	1	0.88185	1	0.17988	1	0.77178	1	0.15904	1	0.38238	1	0.13672	1	0.054778	1	0.95414	1
Amp Peak  2(2q11.2)	67 (22%)	238	0.46521	1	0.57138	1	0.35326	1	0.0067569	1	0.71653	1	0.10783	1	0.8743	1	0.26413	1	0.15008	1	0.18687	1	0.40419	1
Amp Peak  3(2q31.2)	65 (21%)	240	0.1631	1	0.93813	1	0.87602	1	0.36974	1	0.40726	1	0.8491	1	0.74906	1	0.062643	1	0.68572	1	0.0050809	1	0.34212	1
Amp Peak  4(2q32.2)	56 (18%)	249	0.43106	1	0.87654	1	0.74133	1	0.71528	1	0.55057	1	1	1	0.86464	1	0.062164	1	0.11707	1	0.024657	1	0.45353	1
Amp Peak  5(3q26.33)	228 (75%)	77	0.10434	1	0.077856	1	0.026773	1	0.48482	1	0.18432	1	0.086848	1	0.36407	1	0.0074533	1	0.029855	1	0.2156	1	0.25201	1
Amp Peak  6(5p15.33)	138 (45%)	167	0.46022	1	0.076824	1	0.073363	1	0.31	1	0.26561	1	0.37526	1	0.046847	1	0.88598	1	0.035588	1	0.306	1	0.1388	1
Amp Peak  7(5p12)	115 (38%)	190	0.59781	1	0.27181	1	0.23592	1	0.52715	1	0.41192	1	0.82002	1	0.013766	1	0.709	1	0.30923	1	0.40854	1	0.87647	1
Amp Peak  8(6p12.1)	61 (20%)	244	0.51931	1	0.29505	1	0.87349	1	0.64233	1	0.98942	1	0.53661	1	0.098666	1	0.52534	1	0.20497	1	0.65178	1	0.50037	1
Amp Peak  9(6q12)	58 (19%)	247	0.40922	1	0.69239	1	0.74556	1	0.79333	1	1	1	0.60021	1	0.02913	1	0.83032	1	0.089829	1	0.51434	1	0.014776	1
Amp Peak 10(7p11.2)	131 (43%)	174	0.034143	1	0.099059	1	0.89705	1	0.02519	1	0.35618	1	0.5178	1	0.78935	1	0.53584	1	0.10151	1	0.19366	1	0.12275	1
Amp Peak 11(7q22.1)	106 (35%)	199	0.02948	1	0.57635	1	0.4216	1	0.032262	1	0.27651	1	0.25527	1	0.21315	1	0.012957	1	0.02371	1	0.00030825	0.233	0.76709	1
Amp Peak 12(8p11.23)	98 (32%)	207	0.23708	1	0.99407	1	0.89093	1	0.17656	1	0.42799	1	0.25428	1	0.88784	1	0.45266	1	0.74125	1	0.70272	1	0.49767	1
Amp Peak 13(8q11.21)	175 (57%)	130	0.68369	1	0.43998	1	0.60524	1	1	1	0.56009	1	0.59219	1	0.50549	1	0.95973	1	0.12	1	0.081214	1	0.32266	1
Amp Peak 14(8q24.21)	217 (71%)	88	0.33208	1	0.29446	1	0.4799	1	0.5651	1	0.00072577	0.545	0.27419	1	0.66172	1	0.60884	1	0.63343	1	0.8344	1	0.11562	1
Amp Peak 15(9p23)	73 (24%)	232	0.68226	1	0.49342	1	0.17593	1	0.70009	1	0.29913	1	0.42429	1	0.75861	1	0.19652	1	0.99503	1	0.40518	1	0.91836	1
Amp Peak 16(9p13.3)	85 (28%)	220	0.8673	1	0.80178	1	0.47676	1	0.28543	1	0.46049	1	0.29409	1	0.88272	1	0.39621	1	0.70842	1	0.33388	1	0.8486	1
Amp Peak 17(11p13)	59 (19%)	246	0.45922	1	0.056173	1	0.51936	1	0.54198	1	0.36546	1	0.78804	1	0.73764	1	0.009502	1	0.74985	1	0.37079	1	0.073688	1
Amp Peak 18(11p11.2)	59 (19%)	246	0.1941	1	0.75488	1	0.33303	1	0.85345	1	0.089184	1	0.87877	1	0.61901	1	0.12132	1	0.24327	1	0.28848	1	0.64486	1
Amp Peak 19(11q13.3)	139 (46%)	166	0.0042868	1	0.22614	1	0.79737	1	0.26415	1	0.10034	1	0.14615	1	0.18387	1	0.01289	1	0.060306	1	0.011526	1	0.39748	1
Amp Peak 20(12p13.33)	108 (35%)	197	0.82358	1	0.36821	1	0.34978	1	0.61095	1	0.62278	1	0.97077	1	0.48941	1	0.28134	1	0.1363	1	0.24297	1	0.10725	1
Amp Peak 21(12q15)	63 (21%)	242	0.44234	1	0.31049	1	1	1	0.53563	1	0.64028	1	0.19889	1	0.51319	1	0.098632	1	0.20471	1	0.38886	1	0.48641	1
Amp Peak 22(13q22.1)	67 (22%)	238	0.11387	1	0.081883	1	0.53635	1	0.63133	1	0.49515	1	0.70254	1	0.52262	1	0.061023	1	0.88751	1	0.28825	1	0.069032	1
Amp Peak 23(14q11.2)	86 (28%)	219	0.83836	1	0.7086	1	1	1	0.9105	1	0.93878	1	0.86817	1	0.55684	1	0.30616	1	0.16447	1	0.95086	1	0.43923	1
Amp Peak 24(15q26.3)	66 (22%)	239	0.0057976	1	0.3873	1	1	1	0.43804	1	0.97943	1	0.99404	1	0.52093	1	0.57186	1	0.90857	1	0.32947	1	0.75092	1
Amp Peak 25(17q12)	52 (17%)	253	0.060657	1	0.17313	1	0.1732	1	0.38671	1	0.4313	1	0.17046	1	0.37925	1	0.32869	1	0.88839	1	0.020901	1	0.38433	1
Amp Peak 26(18p11.31)	97 (32%)	208	0.12936	1	0.086434	1	0.001437	1	0.26492	1	0.67503	1	0.042572	1	0.57244	1	0.053639	1	0.079677	1	0.048686	1	0.33395	1
Amp Peak 27(18q11.2)	70 (23%)	235	0.92472	1	0.016987	1	0.032297	1	0.31714	1	0.82362	1	0.88004	1	0.34526	1	0.20419	1	0.23009	1	0.1504	1	0.77622	1
Amp Peak 28(20q11.22)	139 (46%)	166	0.82368	1	0.18308	1	0.3041	1	0.77416	1	0.4839	1	0.89228	1	0.59534	1	0.45901	1	0.23174	1	0.86016	1	0.090002	1
Amp Peak 29(Xq28)	95 (31%)	210	0.37162	1	0.67533	1	0.78347	1	0.16099	1	0.37454	1	0.97559	1	0.08607	1	0.48184	1	0.089265	1	0.35188	1	0.25406	1
Del Peak  1(1p36.13)	64 (21%)	241	0.10864	1	0.035877	1	0.27501	1	0.23448	1	0.57613	1	0.53061	1	0.19612	1	0.025258	1	0.33174	1	0.10262	1	0.17573	1
Del Peak  2(1p13.2)	75 (25%)	230	0.21698	1	0.1702	1	1	1	0.33182	1	0.27639	1	0.29409	1	0.64768	1	0.015766	1	0.43664	1	0.12183	1	0.44999	1
Del Peak  3(2q21.2)	38 (12%)	267	0.65268	1	0.2411	1	0.083844	1	0.35368	1	0.095725	1	0.81505	1	0.4234	1	0.57464	1	0.42076	1	0.55084	1	0.85284	1
Del Peak  4(2q22.1)	62 (20%)	243	0.44163	1	0.44492	1	0.26449	1	0.10763	1	0.17014	1	0.30379	1	0.41344	1	0.065892	1	0.55239	1	0.35645	1	0.85723	1
Del Peak  5(2q36.2)	93 (30%)	212	0.16419	1	0.85139	1	0.40362	1	0.020159	1	0.45577	1	0.38921	1	0.77541	1	0.015998	1	0.015387	1	0.2138	1	0.26886	1
Del Peak  6(3p24.1)	226 (74%)	79	0.00037049	0.28	0.6199	1	0.019318	1	0.0041531	1	0.012637	1	0.0089921	1	0.88099	1	0.0014625	1	0.001668	1	0.0020592	1	0.94615	1
Del Peak  7(3p14.2)	231 (76%)	74	0.00022178	0.168	0.50634	1	0.02563	1	0.047725	1	0.031049	1	0.015489	1	0.53745	1	0.0053483	1	0.0053079	1	0.00040307	0.304	0.89405	1
Del Peak  8(3p12.2)	217 (71%)	88	0.00016667	0.126	0.63798	1	0.32254	1	0.15458	1	0.12107	1	0.060449	1	0.88407	1	9.117e-05	0.0692	0.013506	1	0.01141	1	0.6092	1
Del Peak  9(4p15.2)	131 (43%)	174	0.074984	1	0.14142	1	0.44041	1	0.56409	1	0.57442	1	0.2944	1	0.4227	1	0.064281	1	0.021616	1	0.00096551	0.723	0.60971	1
Del Peak 10(4q22.1)	98 (32%)	207	0.45115	1	0.90289	1	0.89093	1	0.78696	1	0.9683	1	0.74648	1	0.48068	1	0.29345	1	0.11747	1	0.12626	1	0.29403	1
Del Peak 11(4q35.2)	124 (41%)	181	0.11498	1	0.63232	1	0.089719	1	0.14697	1	0.98791	1	0.56102	1	0.59174	1	0.89638	1	0.012971	1	0.021015	1	0.064642	1
Del Peak 12(5q11.2)	130 (43%)	175	0.34321	1	0.15382	1	0.092116	1	0.21842	1	0.28361	1	0.79952	1	0.35115	1	0.00061859	0.465	0.039577	1	0.015852	1	0.42868	1
Del Peak 13(5q35.3)	121 (40%)	184	0.31948	1	0.20425	1	0.19056	1	0.1493	1	0.40043	1	0.46072	1	0.49904	1	0.052525	1	0.10168	1	0.019107	1	0.44665	1
Del Peak 14(6p25.3)	63 (21%)	242	0.22253	1	0.19269	1	0.34336	1	0.024	1	0.94911	1	0.46047	1	1	1	0.28831	1	0.73743	1	0.20327	1	0.16883	1
Del Peak 15(7q31.1)	48 (16%)	257	0.7084	1	0.016894	1	0.72792	1	0.97221	1	0.32249	1	0.52677	1	0.46987	1	0.7629	1	0.034894	1	0.063595	1	0.0059805	1
Del Peak 16(7q36.1)	78 (26%)	227	0.0216	1	0.67913	1	0.23969	1	0.75973	1	0.13944	1	0.29009	1	1	1	0.97203	1	0.27334	1	0.35624	1	0.20048	1
Del Peak 17(8p23.2)	173 (57%)	132	0.0058123	1	0.069912	1	0.43823	1	0.75524	1	0.59161	1	0.92418	1	0.68895	1	0.038466	1	0.37473	1	0.72144	1	0.62905	1
Del Peak 18(9p23)	142 (47%)	163	0.44138	1	0.22399	1	0.60939	1	0.40689	1	0.89197	1	0.97022	1	0.42632	1	0.021339	1	0.0065346	1	0.0041111	1	0.58989	1
Del Peak 19(9p21.3)	178 (58%)	127	0.011266	1	0.2408	1	0.51584	1	0.57975	1	0.98162	1	0.73747	1	0.42077	1	0.081617	1	0.022072	1	0.00089215	0.669	0.18623	1
Del Peak 20(9q21.11)	57 (19%)	248	0.88585	1	0.68041	1	1	1	0.83555	1	0.73217	1	0.60617	1	1	1	0.16715	1	0.46328	1	0.12006	1	0.29306	1
Del Peak 21(9q34.3)	51 (17%)	254	0.5855	1	0.61166	1	0.30796	1	0.77988	1	0.84946	1	0.89215	1	0.3799	1	0.29005	1	0.3035	1	0.66572	1	0.74394	1
Del Peak 22(10p15.3)	103 (34%)	202	0.11403	1	0.6677	1	0.78679	1	0.21866	1	0.071349	1	0.31851	1	0.092842	1	0.096861	1	0.43274	1	0.72193	1	0.40067	1
Del Peak 23(10p11.21)	98 (32%)	207	0.19075	1	0.68755	1	0.49278	1	0.28898	1	0.72364	1	0.5888	1	0.066791	1	0.44036	1	0.27416	1	0.37709	1	0.34767	1
Del Peak 24(10q23.31)	80 (26%)	225	0.23207	1	0.57647	1	0.30763	1	0.87496	1	0.95838	1	0.83254	1	0.76461	1	0.1435	1	0.94316	1	0.22795	1	0.018871	1
Del Peak 25(11p15.4)	96 (31%)	209	0.049105	1	0.42222	1	0.58135	1	0.67613	1	0.053383	1	0.55287	1	1	1	0.1197	1	0.28034	1	0.059565	1	0.78627	1
Del Peak 26(11q23.1)	148 (49%)	157	0.72881	1	0.334	1	0.0069841	1	0.89793	1	0.091788	1	0.83214	1	0.59823	1	0.066908	1	0.96047	1	0.11201	1	0.16438	1
Del Peak 27(13q12.11)	138 (45%)	167	0.87601	1	0.55633	1	0.24643	1	0.094199	1	0.21189	1	0.043315	1	1	1	0.043325	1	0.30226	1	0.15245	1	0.35496	1
Del Peak 28(13q14.2)	129 (42%)	176	0.018943	1	0.30117	1	0.36785	1	0.65531	1	0.27686	1	0.48755	1	1	1	0.14441	1	0.39912	1	0.65119	1	0.12087	1
Del Peak 29(14q11.2)	44 (14%)	261	0.29925	1	0.19311	1	0.85537	1	0.16214	1	0.50123	1	0.3052	1	1	1	0.016812	1	0.33097	1	0.48714	1	0.251	1
Del Peak 30(14q32.32)	46 (15%)	259	0.30747	1	0.46501	1	0.21388	1	0.1107	1	0.69735	1	0.48157	1	0.35813	1	0.34384	1	0.7539	1	0.46971	1	0.4718	1
Del Peak 31(15q15.1)	76 (25%)	229	0.56234	1	0.64507	1	0.45932	1	0.15402	1	0.20766	1	0.64778	1	0.22338	1	0.61911	1	0.079943	1	0.3138	1	0.60574	1
Del Peak 32(16q12.1)	52 (17%)	253	0.33267	1	0.79401	1	0.49772	1	0.87955	1	0.59074	1	0.63196	1	0.2174	1	0.46942	1	0.28068	1	0.025716	1	0.64401	1
Del Peak 33(16q23.3)	61 (20%)	244	0.23815	1	0.42643	1	0.6327	1	0.75047	1	0.23105	1	0.56717	1	0.74345	1	0.92506	1	0.45742	1	0.039695	1	0.25031	1
Del Peak 34(17q25.3)	40 (13%)	265	0.88814	1	0.96228	1	1	1	0.26378	1	0.16466	1	0.48678	1	0.24285	1	0.99127	1	0.3894	1	0.28909	1	0.97243	1
Del Peak 35(18q21.2)	161 (53%)	144	0.13434	1	0.59603	1	0.020656	1	0.60384	1	0.81708	1	0.43633	1	0.50778	1	0.00055845	0.421	0.0014533	1	0.042887	1	0.69096	1
Del Peak 36(18q23)	172 (56%)	133	0.078134	1	0.22443	1	0.070191	1	0.64629	1	0.72252	1	0.6406	1	0.42575	1	0.0029495	1	0.0020828	1	0.18293	1	0.29345	1
Del Peak 37(19p13.3)	105 (34%)	200	0.022021	1	0.31496	1	0.6861	1	0.81643	1	0.64625	1	0.5624	1	0.48635	1	0.15778	1	0.54163	1	0.70115	1	0.20366	1
Del Peak 38(19q13.43)	59 (19%)	246	0.040459	1	0.3316	1	1	1	0.015216	1	0.91068	1	0.35998	1	0.50271	1	0.99254	1	0.068624	1	0.51856	1	0.025992	1
Del Peak 39(Xq11.2)	51 (17%)	254	0.032221	1	0.46196	1	0.8638	1	0.12911	1	0.81644	1	0.46638	1	0.86107	1	0.23384	1	0.29186	1	0.36616	1	0.40301	1
Del Peak 40(Xp11.3)	103 (34%)	202	0.0011733	0.878	0.90704	1	0.58845	1	0.073449	1	0.053271	1	0.65873	1	0.16154	1	0.03843	1	0.047088	1	0.045417	1	0.41671	1