		Clinical Features	Time to Death		AGE		GENDER		PATHOLOGY.T		PATHOLOGY.N		TUMOR.STAGE		RADIATIONS.RADIATION.REGIMENINDICATION		NUMBERPACKYEARSSMOKED		STOPPEDSMOKINGYEAR		TOBACCOSMOKINGHISTORYINDICATOR		YEAROFTOBACCOSMOKINGONSET	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q
1p gain	11 (4%)	294	0.78156	1	0.54637	1	0.077248	1	0.34895	1	0.74682	1	0.88814	1	0.73727	1	0.42636	1	0.11048	1	0.018322	1	0.88533	1
1q gain	38 (12%)	267	0.84325	1	0.691	1	0.56328	1	0.13423	1	0.015393	1	0.092949	1	0.16417	1	0.96032	1	0.22455	1	0.48028	1	0.93951	1
2p gain	30 (10%)	275	0.71964	1	0.9197	1	0.39485	1	0.87209	1	0.79611	1	0.54216	1	0.65801	1	0.018994	1	0.31458	1	0.14776	1	0.83389	1
2q gain	20 (7%)	285	0.7903	1	0.91447	1	0.60598	1	0.83181	1	0.86813	1	0.95225	1	1	1	0.083785	1	0.066456	1	0.055825	1	0.61507	1
3p gain	27 (9%)	278	0.27629	1	0.52353	1	0.3679	1	0.87242	1	0.65427	1	0.91877	1	0.64102	1	0.092768	1	0.18567	1	0.12744	1	0.33132	1
3q gain	102 (33%)	203	0.38705	1	0.3146	1	0.058126	1	0.83377	1	0.63667	1	0.24938	1	0.0047679	1	0.16184	1	0.45351	1	0.98293	1	0.81429	1
4p gain	13 (4%)	292	0.65723	1	0.11291	1	0.75765	1	0.85839	1	0.57399	1	0.41017	1	0.32228	1	0.55551	1	0.14299	1	0.80997	1	0.9899	1
4q gain	9 (3%)	296	0.55789	1	0.78524	1	1	1	0.22563	1	0.58107	1	0.4135	1	1	1	0.61394	1	0.13519	1	0.34016	1	0.50977	1
5p gain	76 (25%)	229	0.60259	1	0.3627	1	0.10252	1	0.97145	1	0.95445	1	0.58625	1	0.36104	1	0.28531	1	0.51492	1	0.51667	1	0.20569	1
5q gain	28 (9%)	277	0.59745	1	0.93571	1	0.51349	1	0.7268	1	0.86985	1	0.080082	1	0.36316	1	0.10057	1	0.5462	1	0.85158	1	0.74155	1
6p gain	26 (9%)	279	0.46596	1	0.105	1	1	1	0.80377	1	0.42811	1	0.55367	1	0.033296	1	0.58619	1	0.47909	1	0.76555	1	0.55118	1
6q gain	19 (6%)	286	0.67847	1	0.41274	1	0.79106	1	0.31225	1	0.25125	1	0.14407	1	0.051985	1	0.7917	1	0.98782	1	0.95685	1	0.36935	1
7p gain	70 (23%)	235	0.30341	1	0.066051	1	0.36247	1	0.81412	1	0.92248	1	0.84235	1	0.87556	1	0.32502	1	0.4455	1	0.73098	1	0.86473	1
7q gain	44 (14%)	261	0.27205	1	0.7492	1	0.58428	1	0.5253	1	0.46288	1	0.53546	1	0.70803	1	0.082455	1	0.41073	1	0.73221	1	0.29255	1
8p gain	47 (15%)	258	0.018814	1	0.68028	1	0.21359	1	0.24515	1	0.48932	1	0.54318	1	0.58724	1	0.79693	1	0.014427	1	0.036988	1	0.84839	1
8q gain	129 (42%)	176	0.097202	1	0.077004	1	0.89767	1	0.13606	1	0.34656	1	0.37813	1	0.78999	1	0.6765	1	0.11966	1	0.084385	1	0.31159	1
9p gain	37 (12%)	268	0.30593	1	0.21596	1	0.16833	1	0.88458	1	0.21238	1	0.53875	1	0.69022	1	0.14535	1	0.65653	1	0.20612	1	0.72175	1
9q gain	44 (14%)	261	0.46442	1	0.1178	1	0.7192	1	0.4041	1	0.81604	1	0.58438	1	0.45396	1	0.51065	1	0.53374	1	0.14192	1	0.31526	1
10p gain	13 (4%)	292	0.97567	1	0.99597	1	0.52615	1	0.81411	1	0.28801	1	0.96066	1	0.74296	1	0.19153	1	0.55166	1	0.53853	1	0.30151	1
10q gain	7 (2%)	298	0.10108	1	0.90282	1	0.67806	1	0.30634	1	0.66649	1	0.37174	1	0.067519	1	0.25337	1	0.58429	1	0.87225	1	0.57406	1
11p gain	16 (5%)	289	0.66437	1	0.17055	1	1	1	0.16238	1	0.47811	1	0.29241	1	0.55706	1	0.96221	1	0.033971	1	0.36122	1	0.72256	1
11q gain	16 (5%)	289	0.7387	1	0.21589	1	0.39165	1	0.63026	1	0.93169	1	0.48369	1	0.55706	1	0.90687	1	0.0085291	1	0.032352	1	0.87605	1
12p gain	60 (20%)	245	0.18782	1	0.3624	1	0.19645	1	0.5372	1	0.66117	1	0.91927	1	0.4056	1	0.30604	1	0.24427	1	0.44577	1	0.70427	1
12q gain	25 (8%)	280	0.26432	1	0.96115	1	0.099556	1	0.84995	1	0.77853	1	0.697	1	0.46842	1	0.22499	1	0.63869	1	0.08289	1	0.27179	1
13q gain	17 (6%)	288	0.69963	1	0.93395	1	0.78757	1	0.46784	1	0.066898	1	0.27796	1	1	1	0.5217	1	0.55887	1	0.72715	1	0.80456	1
14q gain	51 (17%)	254	0.81443	1	0.90724	1	0.30796	1	1	1	0.34433	1	0.57997	1	0.21742	1	0.17572	1	0.0075754	1	0.42184	1	0.61769	1
15q gain	13 (4%)	292	0.84485	1	0.78897	1	0.75765	1	0.053499	1	0.69267	1	0.25135	1	0.19724	1	0.19803	1	0.32635	1	0.54013	1	0.1285	1
16p gain	21 (7%)	284	0.69016	1	0.0040018	1	0.80438	1	0.95205	1	0.017947	1	0.27457	1	0.61123	1	0.73116	1	0.67407	1	0.55168	1	0.35641	1
16q gain	25 (8%)	280	0.83383	1	0.142	1	1	1	0.70818	1	0.10174	1	0.49882	1	1	1	0.40711	1	0.67011	1	0.71899	1	0.8428	1
17p gain	18 (6%)	287	0.70623	1	0.78115	1	0.17112	1	0.23844	1	0.81625	1	0.32066	1	0.78096	1	0.84916	1	0.13713	1	0.56317	1	0.26663	1
17q gain	20 (7%)	285	0.98784	1	0.79051	1	0.29943	1	0.010517	1	0.12142	1	0.096781	1	1	1	0.34912	1	0.78656	1	0.026383	1	0.70003	1
18p gain	51 (17%)	254	0.21851	1	0.43091	1	0.00026336	0.228	0.0064427	1	0.53071	1	0.034875	1	0.3799	1	0.19547	1	0.27163	1	0.36328	1	0.77502	1
18q gain	20 (7%)	285	0.043728	1	0.73773	1	0.074744	1	0.7264	1	0.71694	1	0.85528	1	1	1	0.369	1	0.51925	1	0.2643	1	0.47164	1
19p gain	11 (4%)	294	0.033684	1	0.1628	1	1	1	0.39961	1	0.64299	1	0.46069	1	1	1	0.827	1	0.89276	1	0.6791	1	0.56925	1
19q gain	21 (7%)	284	0.22664	1	0.66463	1	0.80438	1	0.10806	1	0.24115	1	0.31738	1	0.61123	1	0.73667	1	0.10636	1	0.26573	1	0.82033	1
20p gain	63 (21%)	242	0.12258	1	0.19005	1	0.52806	1	0.50472	1	0.20351	1	0.26733	1	0.0088496	1	0.25862	1	0.13239	1	0.43258	1	0.97731	1
20q gain	68 (22%)	237	0.53937	1	0.026101	1	0.16718	1	0.50254	1	0.42706	1	0.58625	1	0.0064392	1	0.44088	1	0.1321	1	0.28742	1	0.46682	1
21q gain	8 (3%)	297	0.92	1	0.080485	1	1	1	0.91158	1	0.86557	1	0.4731	1	1	1	0.93997	1	0.99842	1	0.0039044	1	0.44703	1
22q gain	39 (13%)	266	0.49182	1	0.16647	1	0.34168	1	0.90722	1	0.21876	1	0.93301	1	0.84553	1	0.065509	1	0.25896	1	0.55128	1	0.32076	1
Xq gain	22 (7%)	283	0.063151	1	0.55034	1	0.80489	1	0.72965	1	0.16938	1	0.97395	1	0.61071	1	0.14219	1	0.044134	1	0.92778	1	0.69962	1
1p loss	16 (5%)	289	0.23147	1	0.10136	1	0.56999	1	0.013328	1	0.38807	1	0.30375	1	0.24134	1	0.0056699	1	0.011558	1	0.067465	1	0.52136	1
2p loss	6 (2%)	299	0.20402	1	0.9696	1	0.66864	1	0.52189	1	1	1	0.6754	1	0.64129	1	0.82191	1	0.015792	1	0.23341	1	0.85493	1
2q loss	10 (3%)	295	0.17396	1	0.69347	1	1	1	0.27175	1	0.44389	1	0.14205	1	0.46044	1	0.088085	1	0.57279	1	0.40929	1	0.84153	1
3p loss	117 (38%)	188	0.0048889	1	0.91797	1	0.0082379	1	0.37571	1	0.025786	1	0.75997	1	1	1	0.021288	1	0.55927	1	0.16779	1	0.032631	1
3q loss	21 (7%)	284	0.27213	1	0.39625	1	0.20862	1	0.36289	1	0.14366	1	0.27915	1	0.79373	1	0.7188	1	0.047485	1	0.42597	1	0.21721	1
4p loss	73 (24%)	232	0.11818	1	0.39168	1	0.23347	1	0.32246	1	0.59674	1	0.18904	1	1	1	0.070044	1	0.0021728	1	0.00030927	0.268	0.4117	1
4q loss	50 (16%)	255	0.94404	1	0.64839	1	0.8638	1	0.25859	1	0.62195	1	0.43662	1	0.59385	1	0.20535	1	0.061739	1	0.42606	1	0.62365	1
5p loss	9 (3%)	296	0.45118	1	0.097625	1	0.26605	1	0.85839	1	0.90635	1	0.60408	1	0.11859	1	0.75981	1	0.55874	1	0.42987	1	0.22048	1
5q loss	62 (20%)	243	0.28064	1	0.11095	1	0.42581	1	0.28026	1	0.59592	1	0.32995	1	1	1	0.0058445	1	0.99622	1	0.078358	1	0.80872	1
6p loss	19 (6%)	286	0.33569	1	0.67522	1	0.29733	1	0.0014313	1	0.6141	1	0.12495	1	0.58334	1	0.23645	1	0.30763	1	0.13668	1	0.95387	1
6q loss	21 (7%)	284	0.79386	1	0.16715	1	0.45513	1	0.017831	1	0.56666	1	0.23287	1	1	1	0.82466	1	0.47207	1	0.63731	1	0.78399	1
7p loss	5 (2%)	300	0.77958	1	0.49515	1	1	1	0.71176	1	1	1	1	1	1	1	0.23765	1	0.16029	1	0.032577	1	0.83234	1
7q loss	9 (3%)	296	0.84043	1	0.80659	1	0.71042	1	0.27679	1	0.58107	1	0.77804	1	0.45939	1	0.43661	1	0.54921	1	0.8293	1	0.94283	1
8p loss	62 (20%)	243	0.032374	1	0.76278	1	0.75262	1	0.012385	1	0.90362	1	0.14376	1	0.62358	1	0.064597	1	0.71595	1	0.84282	1	0.97642	1
8q loss	7 (2%)	298	0.24413	1	0.71301	1	0.67806	1	1	1	0.33854	1	0.6754	1	1	1	0.081642	1	NA	NA	0.45659	1	0.46912	1
9p loss	84 (28%)	221	0.33142	1	0.31231	1	0.25429	1	0.81793	1	0.94871	1	0.53516	1	1	1	0.0083147	1	0.015802	1	0.015272	1	0.89586	1
9q loss	29 (10%)	276	0.42202	1	0.31094	1	1	1	0.89353	1	0.8041	1	0.30531	1	0.82149	1	0.083562	1	0.73672	1	0.20899	1	0.60757	1
10p loss	44 (14%)	261	0.26898	1	0.34621	1	0.28033	1	0.062761	1	0.58698	1	0.50394	1	1	1	0.077612	1	0.30265	1	0.35856	1	0.79128	1
10q loss	25 (8%)	280	0.38449	1	0.59261	1	0.099556	1	0.30453	1	0.80343	1	0.3714	1	0.80932	1	0.51538	1	0.45048	1	0.26519	1	0.17552	1
11p loss	38 (12%)	267	0.36838	1	0.92968	1	0.43832	1	0.77999	1	0.032668	1	0.1237	1	0.5503	1	0.33889	1	0.022044	1	0.067532	1	0.78879	1
11q loss	58 (19%)	247	0.76292	1	0.43743	1	0.02263	1	1	1	0.28147	1	0.53296	1	0.041767	1	0.6922	1	0.83544	1	0.61616	1	0.30804	1
12p loss	11 (4%)	294	0.1248	1	0.0096893	1	0.30041	1	0.067958	1	0.029259	1	0.12465	1	0.031186	1	0.12871	1	0.63577	1	0.48428	1	0.0067598	1
12q loss	8 (3%)	297	0.64483	1	0.4065	1	0.45264	1	1	1	0.25738	1	1	1	0.41625	1	0.62413	1	NA	NA	0.47839	1	0.42706	1
13q loss	60 (20%)	245	0.70629	1	0.52741	1	0.036786	1	0.60091	1	0.71784	1	0.31981	1	0.61816	1	0.09283	1	0.42373	1	0.11126	1	0.34353	1
14q loss	14 (5%)	291	0.71123	1	0.99682	1	0.36423	1	0.23151	1	0.72346	1	0.28872	1	0.34904	1	0.66452	1	0.60301	1	0.92913	1	0.61915	1
15q loss	23 (8%)	282	0.56101	1	0.60061	1	1	1	0.83071	1	0.45591	1	0.59225	1	1	1	0.86103	1	0.0012364	1	0.50247	1	0.76652	1
16p loss	10 (3%)	295	0.26722	1	0.57371	1	0.73259	1	0.58627	1	0.39041	1	0.81236	1	1	1	0.40142	1	0.34932	1	0.063434	1	0.13489	1
16q loss	23 (8%)	282	0.30676	1	0.92725	1	0.14468	1	0.74368	1	0.87354	1	0.55153	1	0.46215	1	0.43468	1	0.72399	1	0.38651	1	0.42594	1
17p loss	43 (14%)	262	0.54412	1	0.053407	1	0.096515	1	0.1735	1	0.74032	1	0.10123	1	0.34682	1	0.28944	1	0.32242	1	0.30017	1	0.32831	1
17q loss	5 (2%)	300	0.70332	1	0.52818	1	0.32757	1	1	1	0.40416	1	0.43142	1	0.10091	1	0.34483	1	0.002245	1	0.50271	1	0.66597	1
18p loss	28 (9%)	277	0.69909	1	0.53519	1	0.6572	1	0.84712	1	0.42354	1	1	1	0.64914	1	0.72655	1	0.1935	1	0.77729	1	0.31755	1
18q loss	82 (27%)	223	0.076912	1	0.044822	1	0.31618	1	0.75459	1	0.35328	1	0.70752	1	0.88191	1	0.17506	1	0.0028014	1	0.10402	1	0.21023	1
19p loss	26 (9%)	279	0.0099964	1	0.7427	1	0.019821	1	0.16987	1	0.10582	1	0.075667	1	0.63702	1	0.14452	1	0.42103	1	0.36427	1	0.10515	1
19q loss	19 (6%)	286	0.056739	1	0.49016	1	0.11216	1	0.0075801	1	0.13032	1	0.02192	1	1	1	0.16399	1	0.0014612	1	0.034142	1	0.55359	1
20p loss	21 (7%)	284	0.70472	1	0.1175	1	0.20862	1	0.53626	1	0.29364	1	0.48599	1	0.61123	1	0.67667	1	0.29832	1	0.27764	1	0.21887	1
20q loss	10 (3%)	295	0.26052	1	0.50784	1	0.06699	1	0.29344	1	0.73388	1	0.76639	1	1	1	0.54396	1	0.96974	1	0.69476	1	0.45916	1
21q loss	53 (17%)	252	0.7502	1	0.079651	1	0.063796	1	0.3458	1	0.0099388	1	1	1	1	1	0.095044	1	0.18099	1	0.92697	1	0.65912	1
22q loss	24 (8%)	281	0.17209	1	0.95666	1	0.24491	1	0.46773	1	0.16568	1	0.25862	1	0.807	1	0.34094	1	0.71872	1	0.62285	1	0.49024	1
Xq loss	9 (3%)	296	0.54069	1	0.82763	1	0.12109	1	0.3404	1	0.090714	1	0.040717	1	0.69531	1	0.38105	1	0.31265	1	0.54722	1	0.61866	1
