Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE PATHOLOGY.T PATHOLOGY.N PATHOLOGICSPREAD(M) TUMOR.STAGE nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1q gain 8 (8%) 93 9.9139e-05 0.0394 0.79585 1 0.25913 1 NA NA 0.0026953 1 0.83583 1 0.10213 1 0.0071598 1 2p gain 11 (11%) 90 0.1906 1 0.35127 1 0.73907 1 0.54013 1 0.81042 1 0.22164 1 0.043558 1 0.037206 1 2q gain 13 (13%) 88 0.34956 1 0.85461 1 0.54362 1 0.49971 1 0.91863 1 0.055025 1 0.053216 1 0.010119 1 3p gain 24 (24%) 77 0.41418 1 0.9304 1 0.082674 1 0.08801 1 0.017537 1 1 1 0.75495 1 0.23176 1 3q gain 26 (26%) 75 0.2878 1 0.87062 1 0.050179 1 0.20751 1 0.050892 1 1 1 0.70686 1 0.38122 1 4p gain 4 (4%) 97 0.070248 1 0.041415 1 1 1 NA NA 0.3488 1 0.33843 1 0.02803 1 0.083155 1 4q gain 3 (3%) 98 0.69449 1 0.040515 1 1 1 NA NA 0.37128 1 NA NA NA NA NA NA 5p gain 9 (9%) 92 0.7601 1 0.2005 1 0.45903 1 0.39521 1 0.055658 1 0.64269 1 0.52909 1 0.074302 1 5q gain 9 (9%) 92 0.3096 1 0.30658 1 0.45903 1 0.39521 1 0.20515 1 0.64269 1 0.43641 1 0.30531 1 6p gain 4 (4%) 97 0.075456 1 0.36221 1 0.30437 1 NA NA 0.1721 1 0.50649 1 0.0073242 1 0.080012 1 6q gain 3 (3%) 98 5.177e-06 0.00206 0.25838 1 0.54952 1 NA NA 0.70429 1 NA NA 0.0070075 1 0.083155 1 7p gain 54 (53%) 47 0.070809 1 0.9246 1 0.033729 1 0.20045 1 0.0020021 0.785 0.45411 1 0.11693 1 0.00064451 0.253 7q gain 55 (54%) 46 0.070809 1 0.9246 1 0.085159 1 0.20045 1 0.0059372 1 0.45411 1 0.14189 1 0.0023269 0.905 8p gain 5 (5%) 96 0.57604 1 0.24208 1 0.65075 1 NA NA 0.053384 1 0.56092 1 0.73369 1 0.16581 1 8q gain 7 (7%) 94 0.0050106 1 0.62423 1 0.67591 1 NA NA 0.010199 1 0.20541 1 0.39929 1 0.0094683 1 10p gain 3 (3%) 98 NA NA NA NA 1 1 NA NA 0.37128 1 NA NA NA NA NA NA 12p gain 30 (30%) 71 0.99098 1 0.85691 1 0.038131 1 0.25977 1 1 1 0.40823 1 0.33342 1 0.40615 1 12q gain 30 (30%) 71 0.99098 1 0.85691 1 0.038131 1 0.25977 1 1 1 0.40823 1 0.33342 1 0.40615 1 13q gain 10 (10%) 91 0.71675 1 0.39316 1 1 1 0.20751 1 0.79809 1 NA NA 1 1 0.931 1 16p gain 43 (43%) 58 0.53692 1 0.33609 1 0.0049349 1 0.53073 1 0.92108 1 0.36609 1 0.73143 1 0.82361 1 16q gain 40 (40%) 61 0.10291 1 0.42815 1 0.016243 1 0.26383 1 0.68087 1 0.18585 1 0.27591 1 0.79286 1 17p gain 51 (50%) 50 0.22201 1 0.071962 1 0.010523 1 0.20094 1 0.00034536 0.136 0.22359 1 0.035041 1 0.00038144 0.15 17q gain 61 (60%) 40 0.76803 1 0.1372 1 0.1901 1 0.55567 1 0.12495 1 0.22617 1 0.06495 1 0.16912 1 18p gain 6 (6%) 95 0.19522 1 0.59383 1 0.66166 1 0.54013 1 0.85625 1 NA NA 0.36271 1 0.46934 1 18q gain 5 (5%) 96 0.60907 1 0.9674 1 1 1 NA NA 0.67804 1 NA NA 1 1 0.65125 1 20p gain 30 (30%) 71 0.43855 1 0.031036 1 0.64035 1 0.6388 1 0.27598 1 1 1 0.41315 1 0.4902 1 20q gain 31 (31%) 70 0.43855 1 0.070002 1 0.48967 1 0.6388 1 0.38548 1 1 1 0.69321 1 0.70245 1 Xq gain 4 (4%) 97 0.41567 1 0.35969 1 0.09263 1 NA NA 0.78274 1 NA NA 0.62396 1 0.36561 1 1p loss 10 (10%) 91 0.72064 1 0.62015 1 1 1 0.34866 1 0.89103 1 NA NA 1 1 0.39306 1 1q loss 6 (6%) 95 0.64606 1 0.82084 1 1 1 0.34866 1 0.71522 1 NA NA 0.52147 1 0.65125 1 3p loss 6 (6%) 95 0.21136 1 0.051221 1 0.66166 1 NA NA 0.078658 1 0.54998 1 0.42968 1 0.097795 1 3q loss 3 (3%) 98 2.8858e-06 0.00115 0.32379 1 1 1 NA NA 0.072667 1 0.50649 1 0.1994 1 0.10254 1 4p loss 8 (8%) 93 0.13054 1 0.12965 1 0.011721 1 NA NA 0.13492 1 0.7605 1 0.66812 1 0.054527 1 4q loss 8 (8%) 93 0.69937 1 0.47593 1 0.1053 1 NA NA 0.385 1 1 1 0.66812 1 0.25392 1 5p loss 4 (4%) 97 0.00021704 0.0859 0.065705 1 0.09263 1 NA NA 0.015147 1 0.087853 1 0.62396 1 0.10254 1 5q loss 4 (4%) 97 0.027527 1 0.22879 1 0.09263 1 NA NA 0.1721 1 NA NA 0.62396 1 0.57312 1 6p loss 9 (9%) 92 0.031177 1 0.99186 1 0.45903 1 0.25977 1 0.24057 1 0.20397 1 1 1 0.3454 1 6q loss 10 (10%) 91 0.27935 1 0.36423 1 0.069042 1 0.39207 1 0.13806 1 0.30873 1 0.68884 1 0.49277 1 8p loss 3 (3%) 98 0.74752 1 0.40211 1 0.029763 1 NA NA 0.23149 1 NA NA 1 1 0.27575 1 9p loss 12 (12%) 89 0.057575 1 0.52862 1 0.01639 1 0.42366 1 0.12645 1 0.83583 1 0.51762 1 0.28637 1 9q loss 12 (12%) 89 0.098474 1 0.50082 1 0.048123 1 0.42366 1 0.07827 1 0.83583 1 0.64553 1 0.43595 1 10p loss 5 (5%) 96 0.12881 1 0.94748 1 0.65075 1 NA NA 0.53245 1 NA NA 0.13352 1 0.68631 1 10q loss 5 (5%) 96 0.0066996 1 0.74043 1 1 1 NA NA 0.40709 1 0.50649 1 0.27948 1 0.57496 1 11p loss 8 (8%) 93 0.0051494 1 0.051768 1 0.70579 1 NA NA 0.32088 1 NA NA 0.52909 1 0.18054 1 11q loss 9 (9%) 92 0.022359 1 0.067397 1 1 1 NA NA 0.055658 1 0.56092 1 0.5812 1 0.067825 1 13q loss 9 (9%) 92 0.024952 1 0.42445 1 0.0041421 1 NA NA 0.20515 1 0.48817 1 0.4819 1 0.27541 1 14q loss 17 (17%) 84 0.9743 1 0.47209 1 0.39748 1 0.39553 1 0.60843 1 0.44748 1 0.43678 1 0.25627 1 15q loss 10 (10%) 91 0.065524 1 0.36232 1 0.72147 1 0.65425 1 0.13806 1 1 1 1 1 0.20586 1 16q loss 3 (3%) 98 NA NA NA NA 0.029763 1 NA NA 0.70429 1 NA NA 0.62396 1 0.36561 1 17p loss 5 (5%) 96 2.0197e-07 8.08e-05 0.48881 1 0.033868 1 NA NA 0.15362 1 0.33843 1 0.061265 1 0.045259 1 18p loss 15 (15%) 86 0.0021625 0.846 0.8529 1 1 1 0.34866 1 0.11026 1 0.32903 1 0.6966 1 0.27492 1 18q loss 16 (16%) 85 0.0021625 0.846 0.8529 1 0.57212 1 0.34866 1 0.04565 1 0.32903 1 0.89982 1 0.12762 1 19p loss 4 (4%) 97 0.64606 1 0.58392 1 1 1 NA NA 0.59566 1 NA NA 0.62396 1 0.27575 1 19q loss 3 (3%) 98 0.74752 1 0.87873 1 1 1 NA NA 0.37128 1 NA NA NA NA NA NA 21q loss 11 (11%) 90 0.15084 1 0.43528 1 0.31811 1 NA NA 0.66397 1 1 1 1 1 0.20586 1 22q loss 18 (18%) 83 0.70384 1 0.58304 1 0.092636 1 0.4566 1 0.21166 1 0.5958 1 0.27165 1 0.21936 1 Xq loss 3 (3%) 98 0.74752 1 0.91855 1 1 1 NA NA 1 1 NA NA NA NA 1 1