Clinical Features	Time to Death		AGE		PRIMARY.SITE.OF.DISEASE		KARNOFSKY.PERFORMANCE.SCORE		TUMOR.STAGE		RADIATIONS.RADIATION.REGIMENINDICATION	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
Amp Peak  1(1p34.3)	275 (50%)	277	0.033313	1	0.0096236	1	1	1	0.98496	1	0.87734	1	0.12297	1
Amp Peak  2(1q21.3)	347 (63%)	205	0.29131	1	4.2406e-06	0.00176	0.12802	1	0.40756	1	0.76844	1	1	1
Amp Peak  3(1q42.2)	298 (54%)	254	0.29	1	0.00064267	0.262	0.25227	1	0.7365	1	0.17217	1	0.59684	1
Amp Peak  4(2p23.2)	231 (42%)	321	0.91467	1	0.085478	1	0.7623	1	0.98836	1	0.36922	1	1	1
Amp Peak  5(2q31.2)	243 (44%)	309	0.17671	1	0.013208	1	0.75624	1	0.69254	1	0.0063296	1	0.08472	1
Amp Peak  6(3q26.2)	458 (83%)	94	0.95512	1	0.00083603	0.34	0.52714	1	0.001308	0.531	0.055076	1	1	1
Amp Peak  7(4p16.3)	151 (27%)	401	0.45578	1	0.64352	1	0.72265	1	0.07285	1	0.83866	1	1	1
Amp Peak  8(4q13.3)	105 (19%)	447	0.20359	1	0.208	1	0.5711	1	0.41975	1	0.39906	1	1	1
Amp Peak  9(5p15.33)	292 (53%)	260	0.053791	1	0.0027435	1	0.75078	1	0.79795	1	0.29471	1	0.6038	1
Amp Peak 10(6p22.3)	281 (51%)	271	0.13208	1	0.0054343	1	1	1	0.5448	1	0.048744	1	0.61761	1
Amp Peak 11(7q36.3)	296 (54%)	256	0.2909	1	0.85755	1	1	1	0.10005	1	0.74276	1	0.59911	1
Amp Peak 12(8p11.21)	196 (36%)	356	0.33456	1	0.00053439	0.219	0.12077	1	0.66216	1	0.31536	1	0.28833	1
Amp Peak 13(8q24.21)	433 (78%)	119	0.54702	1	0.099473	1	1	1	0.62757	1	0.18383	1	0.51806	1
Amp Peak 14(10p15.3)	237 (43%)	315	0.12977	1	0.00043227	0.178	0.15397	1	0.92261	1	0.22822	1	0.57961	1
Amp Peak 15(10q22.3)	173 (31%)	379	0.52312	1	0.22108	1	0.093412	1	0.98882	1	0.75529	1	1	1
Amp Peak 16(11q14.1)	244 (44%)	308	0.29847	1	0.33529	1	0.25584	1	0.47437	1	0.049586	1	1	1
Amp Peak 17(12p13.33)	308 (56%)	244	0.77242	1	3.537e-07	0.000148	0.75581	1	0.73474	1	0.09376	1	1	1
Amp Peak 18(12p12.1)	293 (53%)	259	0.091797	1	1.2252e-08	5.15e-06	0.25099	1	0.33477	1	0.031214	1	0.60261	1
Amp Peak 19(14q11.2)	140 (25%)	412	0.75193	1	0.065146	1	0.12396	1	0.37817	1	0.097671	1	1	1
Amp Peak 20(15q26.3)	153 (28%)	399	0.071603	1	0.28433	1	0.72816	1	0.41962	1	0.14409	1	0.56427	1
Amp Peak 21(17q25.3)	202 (37%)	350	0.021687	1	0.78279	1	1	1	0.68542	1	0.38058	1	1	1
Amp Peak 22(18q11.2)	134 (24%)	418	0.97888	1	0.044053	1	0.11384	1	0.17994	1	0.85448	1	0.56654	1
Amp Peak 23(19p13.12)	299 (54%)	253	0.19868	1	0.071991	1	0.46097	1	0.59701	1	0.11797	1	0.59573	1
Amp Peak 24(19q12)	305 (55%)	247	0.60233	1	1.1942e-05	0.00493	0.16224	1	0.51038	1	0.10228	1	1	1
Amp Peak 25(19q13.2)	232 (42%)	320	0.020101	1	3.3724e-06	0.00141	0.14987	1	0.98882	1	0.64405	1	0.57529	1
Amp Peak 26(20p13)	299 (54%)	253	0.31744	1	0.0075623	1	0.75258	1	0.10999	1	0.0021292	0.86	1	1
Amp Peak 27(20q11.21)	322 (58%)	230	0.10443	1	7.6161e-08	3.19e-05	1	1	0.26442	1	0.08585	1	1	1
Amp Peak 28(20q13.33)	384 (70%)	168	0.3309	1	9.1025e-06	0.00377	1	1	0.75229	1	0.5452	1	1	1
Amp Peak 29(22q12.2)	88 (16%)	464	0.54524	1	0.024054	1	1	1	0.41922	1	0.43675	1	1	1
Amp Peak 30(Xp11.23)	162 (29%)	390	0.14383	1	0.022273	1	0.078111	1	0.27522	1	0.36096	1	0.55925	1
Amp Peak 31(Xq28)	219 (40%)	333	0.35482	1	0.9702	1	0.77011	1	0.65424	1	0.0015487	0.627	0.061931	1
Del Peak  1(1p36.11)	260 (47%)	292	0.16907	1	0.18717	1	0.75078	1	0.42681	1	0.49431	1	1	1
Del Peak  2(1q32.3)	89 (16%)	463	0.96047	1	0.54407	1	1	1	0.287	1	0.41952	1	0.41052	1
Del Peak  3(2p25.3)	117 (21%)	435	0.92194	1	0.42454	1	0.61547	1	0.87498	1	0.057746	1	0.51133	1
Del Peak  4(2q22.1)	129 (23%)	423	0.24992	1	0.38461	1	0.65632	1	0.59544	1	0.3515	1	1	1
Del Peak  5(2q37.3)	169 (31%)	383	0.55466	1	0.10225	1	0.35905	1	0.43156	1	0.81639	1	0.22336	1
Del Peak  6(3p26.2)	203 (37%)	349	0.79206	1	0.0024558	0.99	0.12641	1	0.24583	1	0.13666	1	0.049271	1
Del Peak  7(4q22.1)	369 (67%)	183	0.51011	1	0.95024	1	1	1	0.92539	1	0.042268	1	1	1
Del Peak  8(4q34.3)	399 (72%)	153	0.79733	1	0.36029	1	0.72816	1	0.1711	1	0.8065	1	0.56427	1
Del Peak  9(5q11.2)	329 (60%)	223	0.7374	1	0.62823	1	0.76732	1	0.32514	1	0.23928	1	0.56844	1
Del Peak 10(5q13.2)	392 (71%)	160	0.26056	1	0.92228	1	0.74681	1	0.21637	1	0.88575	1	0.20287	1
Del Peak 11(6q27)	356 (64%)	196	0.30099	1	0.00046058	0.189	1	1	0.454	1	0.51174	1	1	1
Del Peak 12(7p22.1)	240 (43%)	312	0.089961	1	0.029139	1	0.75759	1	0.49672	1	0.97102	1	1	1
Del Peak 13(8p23.3)	371 (67%)	181	0.27091	1	0.063888	1	1	1	0.95041	1	0.90093	1	1	1
Del Peak 14(8p21.2)	386 (70%)	166	0.67227	1	0.064513	1	1	1	0.64693	1	0.52837	1	1	1
Del Peak 15(9p24.3)	245 (44%)	307	0.94348	1	0.024992	1	0.44966	1	0.92791	1	0.39933	1	0.58724	1
Del Peak 16(9q21.11)	266 (48%)	286	0.59529	1	4.0871e-06	0.0017	0.053292	1	0.6337	1	0.0046023	1	1	1
Del Peak 17(9q34.13)	329 (60%)	223	0.78553	1	0.04016	1	0.76732	1	0.62301	1	0.8537	1	0.27635	1
Del Peak 18(10p15.3)	115 (21%)	437	0.33559	1	0.82996	1	0.60833	1	0.72035	1	0.39632	1	0.50455	1
Del Peak 19(10q23.31)	214 (39%)	338	0.32831	1	0.97238	1	1	1	0.39299	1	0.63127	1	0.56285	1
Del Peak 20(10q26.3)	186 (34%)	366	0.082942	1	0.84166	1	0.79979	1	0.77021	1	0.34177	1	1	1
Del Peak 21(11p15.5)	328 (59%)	224	0.050938	1	0.56255	1	0.026685	1	0.26732	1	0.68129	1	1	1
Del Peak 22(11q25)	191 (35%)	361	0.59812	1	0.079734	1	0.22459	1	0.6305	1	0.074931	1	0.27594	1
Del Peak 23(12q23.1)	188 (34%)	364	0.27125	1	0.014726	1	0.79768	1	0.3997	1	0.25709	1	1	1
Del Peak 24(12q24.33)	207 (38%)	345	0.65459	1	0.1121	1	0.12963	1	0.65197	1	0.54616	1	0.2956	1
Del Peak 25(13q14.2)	342 (62%)	210	0.071376	1	0.56101	1	0.77706	1	0.59232	1	0.75528	1	0.56079	1
Del Peak 26(14q23.2)	290 (53%)	262	0.67006	1	0.45605	1	0.47495	1	0.04232	1	0.31679	1	0.10628	1
Del Peak 27(15q15.1)	347 (63%)	205	0.66395	1	0.005794	1	0.41147	1	0.25272	1	0.029059	1	0.29836	1
Del Peak 28(16p13.3)	293 (53%)	259	0.88619	1	0.8832	1	0.751	1	0.57764	1	0.21674	1	0.60261	1
Del Peak 29(16q22.1)	437 (79%)	115	0.64492	1	0.004972	1	0.19319	1	0.27537	1	0.54444	1	1	1
Del Peak 30(16q23.1)	429 (78%)	123	0.16107	1	7.723e-05	0.0318	0.63633	1	0.077815	1	0.12535	1	1	1
Del Peak 31(17p12)	466 (84%)	86	0.79703	1	0.98203	1	0.49311	1	0.73023	1	0.011306	1	1	1
Del Peak 32(17q11.2)	450 (82%)	102	0.70816	1	0.033118	1	0.066632	1	0.68639	1	0.25377	1	1	1
Del Peak 33(18q23)	359 (65%)	193	0.66862	1	0.79539	1	0.22902	1	0.54379	1	0.6972	1	1	1
Del Peak 34(19p13.3)	485 (88%)	67	0.19029	1	0.016439	1	1	1	0.008327	1	0.05913	1	1	1
Del Peak 35(19q13.33)	286 (52%)	266	0.60345	1	0.35487	1	1	1	0.31129	1	0.37819	1	0.24963	1
Del Peak 36(19q13.43)	273 (49%)	279	0.45631	1	0.0261	1	1	1	0.28294	1	0.26365	1	1	1
Del Peak 37(21q22.3)	214 (39%)	338	0.58418	1	0.34995	1	0.77386	1	0.66531	1	0.12269	1	1	1
Del Peak 38(22q13.32)	477 (86%)	75	0.84311	1	0.90109	1	0.44336	1	0.75231	1	0.55177	1	1	1
Del Peak 39(Xp21.1)	352 (64%)	200	0.83809	1	0.36742	1	1	1	0.98653	1	0.67801	1	0.55685	1