Clinical Features Time to Death AGE GENDER HISTOLOGICAL.TYPE PATHOLOGY.T PATHOLOGY.N PATHOLOGICSPREAD(M) TUMOR.STAGE RADIATIONS.RADIATION.REGIMENINDICATION nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 6 (4%) 155 NA NA 0.21232 1 0.40261 1 0.7118 1 1 1 0.80897 1 0.44966 1 1 1 1 1 1q gain 19 (12%) 142 0.77013 1 0.52052 1 0.21987 1 0.30035 1 0.42227 1 0.21413 1 0.38446 1 0.33485 1 0.10648 1 2p gain 10 (6%) 151 0.69163 1 0.29242 1 0.74114 1 0.58559 1 0.27167 1 0.29118 1 1 1 0.057839 1 1 1 2q gain 11 (7%) 150 0.40638 1 0.5883 1 0.52749 1 0.60524 1 0.53198 1 0.29118 1 0.83124 1 0.21312 1 1 1 3p gain 4 (2%) 157 NA NA 0.54332 1 0.64825 1 0.86154 1 0.85621 1 0.39444 1 1 1 0.52945 1 1 1 3q gain 13 (8%) 148 0.37695 1 0.027259 1 0.015666 1 0.48355 1 1 1 0.76749 1 0.50337 1 1 1 1 1 4p gain 3 (2%) 158 NA NA 0.1587 1 0.27329 1 NA NA 0.052185 1 0.7286 1 1 1 0.28386 1 1 1 5p gain 26 (16%) 135 0.97518 1 0.7625 1 0.18956 1 0.49423 1 0.93479 1 0.68065 1 0.25276 1 0.10775 1 0.18416 1 5q gain 6 (4%) 155 0.13741 1 0.79228 1 0.40261 1 0.041888 1 0.90071 1 0.87747 1 1 1 0.59378 1 1 1 6p gain 11 (7%) 150 0.78796 1 0.83776 1 0.75755 1 0.79896 1 0.24267 1 0.72661 1 1 1 0.4531 1 1 1 6q gain 10 (6%) 151 0.35022 1 0.89129 1 1 1 0.78005 1 0.35394 1 0.74648 1 0.66128 1 0.71851 1 1 1 7p gain 49 (30%) 112 0.52392 1 0.013629 1 0.11679 1 0.31948 1 0.46378 1 0.55635 1 0.67337 1 0.18128 1 0.64056 1 7q gain 44 (27%) 117 0.73517 1 0.0043242 1 0.36986 1 0.4464 1 0.20406 1 0.64321 1 0.25548 1 0.15689 1 1 1 8p gain 50 (31%) 111 0.5995 1 0.044296 1 0.3863 1 0.48741 1 0.085738 1 0.58537 1 0.093192 1 0.58977 1 0.17402 1 8q gain 68 (42%) 93 0.3018 1 0.029965 1 0.42111 1 0.63534 1 0.012221 1 0.19054 1 0.15279 1 0.25797 1 0.65086 1 9p gain 11 (7%) 150 0.84395 1 0.31948 1 0.35347 1 0.70801 1 0.051022 1 0.12723 1 1 1 0.005968 1 0.30127 1 9q gain 15 (9%) 146 0.85643 1 0.18794 1 0.59462 1 0.94249 1 0.14391 1 0.13399 1 0.87089 1 0.16109 1 0.39073 1 10p gain 23 (14%) 138 0.97591 1 0.33958 1 0.36225 1 0.31462 1 0.53708 1 0.7525 1 0.4101 1 0.071037 1 1 1 10q gain 10 (6%) 151 0.63432 1 0.98735 1 0.74114 1 0.64649 1 0.89438 1 0.74648 1 0.81165 1 0.69557 1 1 1 11p gain 4 (2%) 157 NA NA 0.57245 1 0.64825 1 0.6765 1 0.38547 1 0.18275 1 1 1 0.33542 1 1 1 11q gain 8 (5%) 153 0.23977 1 0.77034 1 1 1 0.80194 1 0.86419 1 0.74334 1 0.77393 1 0.70943 1 1 1 12p gain 15 (9%) 146 0.72575 1 0.27338 1 0.10514 1 0.99756 1 0.37435 1 0.65454 1 0.16261 1 0.67593 1 1 1 12q gain 10 (6%) 151 0.6695 1 0.056345 1 0.74114 1 0.30885 1 0.89438 1 0.15196 1 0.81165 1 0.61 1 0.27734 1 13q gain 30 (19%) 131 0.33136 1 0.73051 1 0.22218 1 0.50103 1 0.67646 1 0.47443 1 0.61678 1 0.68973 1 1 1 15q gain 7 (4%) 154 0.17805 1 0.4137 1 0.24304 1 0.36376 1 0.56947 1 0.067357 1 1 1 0.43909 1 1 1 16p gain 12 (7%) 149 0.57506 1 0.61428 1 0.76337 1 0.6101 1 0.34105 1 0.067536 1 0.11786 1 0.0078678 1 0.32456 1 16q gain 8 (5%) 153 0.67109 1 0.86367 1 1 1 0.86202 1 0.071915 1 0.35397 1 0.19462 1 0.016717 1 1 1 17p gain 6 (4%) 155 0.15987 1 0.54989 1 1 1 0.80466 1 0.81187 1 0.081825 1 0.026758 1 0.1425 1 1 1 17q gain 9 (6%) 152 0.17381 1 0.66586 1 0.74057 1 0.8792 1 0.82933 1 0.11784 1 0.022532 1 0.19725 1 1 1 18p gain 13 (8%) 148 0.60965 1 0.56401 1 1 1 0.81302 1 1 1 0.095641 1 0.61351 1 0.63246 1 0.34723 1 18q gain 7 (4%) 154 0.59843 1 0.61937 1 0.44149 1 0.31349 1 0.56254 1 0.77733 1 0.14597 1 0.89009 1 1 1 19p gain 10 (6%) 151 0.9651 1 0.42917 1 0.015484 1 0.5358 1 0.80647 1 0.047506 1 0.042968 1 0.045508 1 1 1 19q gain 17 (11%) 144 0.30901 1 0.21367 1 0.12061 1 0.50871 1 0.40424 1 0.10457 1 0.21884 1 0.024666 1 0.43189 1 20p gain 61 (38%) 100 0.069266 1 0.20685 1 0.00012762 0.0831 0.68522 1 0.051468 1 0.69124 1 0.14903 1 0.1905 1 0.6505 1 20q gain 75 (47%) 86 0.052363 1 0.13432 1 0.0003704 0.24 0.39887 1 0.00074542 0.481 0.26443 1 0.053179 1 0.18868 1 0.66458 1 22q gain 3 (2%) 158 0.76548 1 0.26606 1 1 1 0.92711 1 0.81654 1 0.38182 1 1 1 0.28386 1 1 1 1p loss 6 (4%) 155 0.0048914 1 0.68808 1 0.22213 1 0.88523 1 0.33487 1 0.31311 1 0.00011134 0.0726 0.00034502 0.224 1 1 2p loss 3 (2%) 158 NA NA NA NA 0.5658 1 NA NA 0.81654 1 0.43682 1 0.22318 1 0.33649 1 0.090853 1 2q loss 4 (2%) 157 NA NA 0.86702 1 1 1 0.30831 1 0.614 1 0.091691 1 0.14895 1 0.15954 1 0.11962 1 3p loss 10 (6%) 151 0.63265 1 0.56131 1 1 1 0.86529 1 0.72851 1 0.74648 1 1 1 0.67705 1 1 1 3q loss 6 (4%) 155 0.72695 1 0.63881 1 0.40261 1 0.85167 1 1 1 0.87747 1 1 1 0.73398 1 1 1 4p loss 24 (15%) 137 0.70443 1 0.12857 1 0.82448 1 0.081187 1 0.036701 1 1 1 0.5651 1 0.068199 1 0.1607 1 4q loss 20 (12%) 141 0.74813 1 0.33791 1 0.46572 1 0.027888 1 0.024302 1 0.83741 1 1 1 0.30103 1 0.11674 1 5p loss 7 (4%) 154 0.41456 1 0.60682 1 1 1 0.022007 1 0.61369 1 0.37499 1 1 1 0.39676 1 1 1 5q loss 15 (9%) 146 0.12023 1 0.50013 1 0.28598 1 0.0004027 0.26 0.052164 1 0.90258 1 0.24208 1 0.18074 1 0.39073 1 6p loss 8 (5%) 153 0.95775 1 0.047388 1 0.71546 1 0.01364 1 0.1341 1 0.16601 1 0.57768 1 0.22934 1 1 1 6q loss 12 (7%) 149 0.61126 1 0.2185 1 0.76337 1 0.19079 1 0.20241 1 0.42793 1 0.85026 1 0.036766 1 1 1 7p loss 3 (2%) 158 0.21328 1 0.19217 1 0.27329 1 0.721 1 0.091611 1 0.080606 1 1 1 0.4558 1 1 1 7q loss 5 (3%) 156 0.20802 1 0.13976 1 0.081948 1 0.45399 1 0.37881 1 0.47744 1 1 1 0.92941 1 1 1 8p loss 10 (6%) 151 0.26995 1 0.43917 1 0.74114 1 0.038527 1 0.59236 1 0.39953 1 0.81165 1 0.62531 1 1 1 8q loss 3 (2%) 158 NA NA 0.6069 1 1 1 0.0044784 1 NA NA NA NA 1 1 NA NA 1 1 9p loss 26 (16%) 135 0.05512 1 0.51302 1 0.66317 1 0.41377 1 0.052648 1 0.3568 1 1 1 0.62474 1 0.59052 1 9q loss 11 (7%) 150 0.19936 1 0.36788 1 1 1 0.67533 1 0.18707 1 0.21226 1 0.83124 1 0.96846 1 0.30127 1 10p loss 10 (6%) 151 0.20279 1 0.35494 1 0.31819 1 0.019142 1 0.066323 1 0.45179 1 0.66128 1 0.34225 1 0.031538 1 10q loss 9 (6%) 152 0.26302 1 0.67563 1 0.74057 1 0.024806 1 0.3024 1 0.65154 1 0.79221 1 0.24987 1 0.25276 1 11p loss 12 (7%) 149 0.3471 1 0.23739 1 0.54758 1 0.29728 1 0.16792 1 0.83423 1 0.08062 1 0.4886 1 1 1 11q loss 9 (6%) 152 0.35646 1 0.46566 1 0.3147 1 0.46939 1 0.24021 1 0.71323 1 0.3599 1 0.50603 1 1 1 12p loss 11 (7%) 150 0.17386 1 0.7049 1 0.52749 1 0.36139 1 0.056387 1 0.00024278 0.158 0.4597 1 0.00022771 0.148 0.30127 1 12q loss 6 (4%) 155 0.33466 1 0.21025 1 0.081885 1 0.70458 1 0.19131 1 0.033278 1 1 1 0.085225 1 1 1 13q loss 5 (3%) 156 NA NA 0.86584 1 1 1 0.32474 1 0.70166 1 0.35562 1 0.63467 1 0.57689 1 0.14766 1 14q loss 10 (6%) 151 0.20828 1 0.077562 1 1 1 0.90509 1 0.87919 1 0.519 1 0.41638 1 0.81611 1 1 1 15q loss 10 (6%) 151 0.58029 1 0.32846 1 1 1 0.11736 1 0.10906 1 0.42665 1 0.81165 1 0.64063 1 0.031538 1 16p loss 9 (6%) 152 0.60552 1 0.39559 1 0.0853 1 0.38574 1 0.19221 1 0.80964 1 1 1 0.86243 1 1 1 16q loss 14 (9%) 147 0.53858 1 0.94105 1 0.40568 1 0.46396 1 0.12369 1 0.26444 1 1 1 0.84906 1 0.36928 1 17p loss 32 (20%) 129 0.46323 1 0.35069 1 0.54699 1 0.022016 1 0.068289 1 0.28605 1 0.9265 1 0.43552 1 0.054082 1 17q loss 9 (6%) 152 0.85811 1 0.66653 1 0.48672 1 0.031598 1 0.93618 1 0.36827 1 0.24687 1 0.40692 1 0.25276 1 18p loss 12 (7%) 149 0.27794 1 0.87206 1 1 1 0.95191 1 0.55346 1 0.36232 1 0.58699 1 0.38048 1 1 1 18q loss 24 (15%) 137 0.21262 1 0.45982 1 0.5051 1 0.83594 1 0.57928 1 0.22423 1 0.24859 1 0.43819 1 1 1 19p loss 16 (10%) 145 0.67097 1 0.90453 1 0.28303 1 0.54352 1 0.5405 1 0.28388 1 0.75946 1 0.51103 1 1 1 19q loss 12 (7%) 149 0.87876 1 0.18165 1 0.36353 1 0.55857 1 0.42097 1 0.23257 1 0.70175 1 0.14092 1 1 1 20p loss 4 (2%) 157 0.28647 1 0.87261 1 0.30382 1 0.86154 1 0.25336 1 0.72626 1 0.085463 1 0.30703 1 1 1 21q loss 29 (18%) 132 0.99647 1 0.66822 1 1 1 0.64665 1 0.41315 1 0.97731 1 0.85174 1 0.69138 1 1 1 22q loss 22 (14%) 139 0.65543 1 0.46533 1 1 1 0.20815 1 0.66999 1 0.69354 1 0.73123 1 0.55084 1 0.52512 1 Xq loss 7 (4%) 154 0.13912 1 0.28924 1 0.70232 1 0.20691 1 0.087351 1 0.37352 1 1 1 0.16566 1 0.20159 1