Broad GDAC Analyses Status
analyses__2013_01_16__laml Run for Tumor Type: LAML
Tumor
BCR
Clinical
CN
LowP
Methylation
mRNA
mRNAseq
miR
miRseq
RPPA
MAF
LAML
202
200
0
0
194
0
179
0
187
0
199
Note that the links below require Broad internal Firehose login credentials.
Pipeline
NotRunnable
Runnable
InProcess
Successful
Unsuccessful
1
TB-Aggregate_Clusters
0
0
0
1
0
2
TB-Aggregate_Gene_Status
0
0
0
1
0
3
TB-CoMut2.0
0
0
0
1
0
4
TB-CopyNumber_Clustering_CNMF
1
0
0
0
0
5
TB-CopyNumber_GeneBySample
1
0
0
0
0
6
TB-CopyNumber_Gistic2
1
0
0
0
0
7
TB-CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
8
TB-Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
9
TB-Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
10
TB-Correlate_Clinical_vs_Methylation
0
0
0
1
0
11
TB-Correlate_Clinical_vs_miR
1
0
0
0
0
12
TB-Correlate_Clinical_vs_miRseq
0
0
0
1
0
13
TB-Correlate_Clinical_vs_Molecular_Signatures
0
0
0
1
0
14
TB-Correlate_Clinical_vs_mRNA
1
0
0
0
0
15
TB-Correlate_Clinical_vs_mRNAseq
0
0
0
1
0
16
TB-Correlate_Clinical_vs_Mutation
0
0
0
1
0
17
TB-Correlate_Clinical_vs_RPPA
1
0
0
0
0
18
TB-Correlate_CopyNumber_vs_miR
1
0
0
0
0
19
TB-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
20
TB-Correlate_CopyNumber_vs_mRNAseq
1
0
0
0
0
21
TB-Correlate_Methylation_vs_mRNA
0
0
0
1
0
22
TB-GenerateStickFigures2.0
0
0
0
1
0
23
TB-GenerateStickFiguresS2N
0
0
0
1
0
24
TB-Hotnet
1
0
0
0
0
25
TB-Hotnet_nozzleReport
1
0
0
0
0
26
TB-Hotnet_preprocess
1
0
0
0
0
27
TB-Methylation_Clustering_CNMF
0
0
0
1
0
28
TB-Methylation_Preprocess
0
0
0
1
0
29
TB-miRseq_Clustering_CNMF
0
0
0
1
0
30
TB-miRseq_Clustering_Consensus
0
0
0
1
0
31
TB-miRseq_Preprocess
0
0
0
1
0
32
TB-miR_Clustering_CNMF
1
0
0
0
0
33
TB-miR_Clustering_Consensus
1
0
0
0
0
34
TB-miR_FindDirectTargets
1
0
0
0
0
35
TB-miR_Preprocess
1
0
0
0
0
36
TB-mRNAseq_Clustering_CNMF
0
0
0
1
0
37
TB-mRNAseq_Clustering_Consensus
0
0
0
1
0
38
TB-mRNA_Clustering_CNMF
1
0
0
0
0
39
TB-mRNA_Clustering_Consensus
1
0
0
0
0
40
TB-mRNA_Preprocess_Median
1
0
0
0
0
41
TB-Mutation_Assessor
0
0
0
1
0
42
TB-MutSigNozzleReport2.0
0
0
0
1
0
43
TB-MutSigNozzleReportS2N
0
0
0
1
0
44
TB-MutSigPreprocess2.0
0
0
0
1
0
45
TB-MutSigRun2.0
0
0
0
1
0
46
TB-MutSigRunS2N
0
0
0
1
0
47
TB-Paradigm
1
0
0
0
0
48
TB-ParadigmPrepare
1
0
0
0
0
49
TB-ParadigmPrepareWithCopyNumber
1
0
0
0
0
50
TB-ParadigmPrepareWithRNASeq
0
0
0
1
0
51
TB-ParadigmPrepareWithRNASeqAndCopyNumber
1
0
0
0
0
52
TB-ParadigmPreprocess
1
0
0
0
0
53
TB-ParadigmPreprocessExpression
1
0
0
0
0
54
TB-ParadigmPreprocessRNASeq
0
0
0
1
0
55
TB-ParadigmPreprocessWithCopyNumber
1
0
0
0
0
56
TB-ParadigmPreprocessWithRNASeq
0
0
0
1
0
57
TB-ParadigmPreprocessWithRNASeqAndCopyNumber
1
0
0
0
0
58
TB-ParadigmReport
1
0
0
0
0
59
TB-ParadigmReportPreprocess
1
0
0
0
0
60
TB-ParadigmReportPreprocessWithCopyNumber
1
0
0
0
0
61
TB-ParadigmReportPreprocessWithRNASeq
0
0
0
1
0
62
TB-ParadigmReportPreprocessWithRNASeqAndCopyNumber
1
0
0
0
0
63
TB-ParadigmReportWithCopyNumber
1
0
0
0
0
64
TB-ParadigmReportWithRNASeq
0
0
0
1
0
65
TB-ParadigmReportWithRNASeqAndCopyNumber
1
0
0
0
0
66
TB-ParadigmWithCopyNumber
1
0
0
0
0
67
TB-ParadigmWithRNASeq
0
0
0
1
0
68
TB-ParadigmWithRNASeqAndCopyNumber
1
0
0
0
0
69
TB-Pathway_FindEnrichedGenes
1
0
0
0
0
70
TB-ProcessCoverageForMutSig2.0
0
0
0
1
0
71
TB-RPPA_Clustering_CNMF
1
0
0
0
0
72
TB-RPPA_Clustering_Consensus
1
0
0
0
0
Total
41
0
0
31
0
This table generated on Tue Feb 12 11:59:43 2013