Broad GDAC analyses__2013_01_16__pancan12 Run Status : PANCAN12

Tumor	BCR	Clinical	CN	LowP	Methylation	mRNA	mRNAseq	miR	miRseq	RPPA	MAF
PANCAN12	5345	4847	4809	406	4905	2179	3351	1061	4154	2785	2819

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	Pipeline	NotRunnable	Runnable	Successful	Unsuccessful
1	TP-Aggregate_Clusters	0	1	0	0
2	TP-Aggregate_Gene_Status	0	1	0	0
3	TP-CoMut2.0	1	0	0	0
4	TP-CopyNumber_Clustering_CNMF	0	0	0	1
5	TP-CopyNumber_GeneBySample	0	0	0	1
6	TP-CopyNumber_Gistic2	0	0	1	0
7	TP-CopyNumber_Gistic2_Postprocess_Focal	0	0	1	0
8	TP-Correlate_Clinical_vs_CopyNumber_Arm	0	0	0	1
9	TP-Correlate_Clinical_vs_CopyNumber_Focal	0	0	0	1
10	TP-Correlate_Clinical_vs_Methylation	0	0	1	0
11	TP-Correlate_Clinical_vs_miR	0	0	1	0
12	TP-Correlate_Clinical_vs_miRseq	1	0	0	0
13	TP-Correlate_Clinical_vs_Molecular_Signatures	1	0	0	0
14	TP-Correlate_Clinical_vs_mRNA	0	0	1	0
15	TP-Correlate_Clinical_vs_mRNAseq	1	0	0	0
16	TP-Correlate_Clinical_vs_Mutation	1	0	0	0
17	TP-Correlate_Clinical_vs_RPPA	1	0	0	0
18	TP-Correlate_CopyNumber_vs_miR	1	0	0	0
19	TP-Correlate_CopyNumber_vs_mRNA	1	0	0	0
20	TP-Correlate_CopyNumber_vs_mRNAseq	1	0	0	0
21	TP-Correlate_Methylation_vs_mRNA	0	0	1	0
22	TP-GenerateStickFigures2.0	1	0	0	0
23	TP-GenerateStickFiguresS2N	1	0	0	0
24	TP-Hotnet	1	0	0	0
25	TP-Hotnet_nozzleReport	1	0	0	0
26	TP-Hotnet_preprocess	1	0	0	0
27	TP-Methylation_Clustering_CNMF	0	0	0	1
28	TP-Methylation_Preprocess	0	0	1	0
29	TP-miRseq_Clustering_CNMF	1	0	0	0
30	TP-miRseq_Clustering_Consensus	1	0	0	0
31	TP-miRseq_Preprocess	1	0	0	0
32	TP-miR_Clustering_CNMF	0	0	1	0
33	TP-miR_Clustering_Consensus	0	0	1	0
34	TP-miR_FindDirectTargets	0	0	1	0
35	TP-miR_Preprocess	0	0	1	0
36	TP-mRNAseq_Clustering_CNMF	1	0	0	0
37	TP-mRNAseq_Clustering_Consensus	1	0	0	0
38	TP-mRNA_Clustering_CNMF	0	0	1	0
39	TP-mRNA_Clustering_Consensus	0	0	0	1
40	TP-mRNA_Preprocess_Median	0	0	1	0
41	TP-Mutation_Assessor	1	0	0	0
42	TP-MutSigNozzleReport2.0	1	0	0	0
43	TP-MutSigNozzleReportS2N	1	0	0	0
44	TP-MutSigPreprocess2.0	1	0	0	0
45	TP-MutSigRun2.0	1	0	0	0
46	TP-MutSigRunS2N	0	0	0	1
47	TP-Paradigm	1	0	0	0
48	TP-ParadigmPrepare	1	0	0	0
49	TP-ParadigmPrepareWithCopyNumber	1	0	0	0
50	TP-ParadigmPrepareWithRNASeq	1	0	0	0
51	TP-ParadigmPrepareWithRNASeqAndCopyNumber	1	0	0	0
52	TP-ParadigmPreprocess	1	0	0	0
53	TP-ParadigmPreprocessExpression	0	0	0	1
54	TP-ParadigmPreprocessRNASeq	1	0	0	0
55	TP-ParadigmPreprocessWithCopyNumber	1	0	0	0
56	TP-ParadigmPreprocessWithRNASeq	1	0	0	0
57	TP-ParadigmPreprocessWithRNASeqAndCopyNumber	1	0	0	0
58	TP-ParadigmReport	1	0	0	0
59	TP-ParadigmReportPreprocess	1	0	0	0
60	TP-ParadigmReportPreprocessWithCopyNumber	1	0	0	0
61	TP-ParadigmReportPreprocessWithRNASeq	1	0	0	0
62	TP-ParadigmReportPreprocessWithRNASeqAndCopyNumber	1	0	0	0
63	TP-ParadigmReportWithCopyNumber	1	0	0	0
64	TP-ParadigmReportWithRNASeq	1	0	0	0
65	TP-ParadigmReportWithRNASeqAndCopyNumber	1	0	0	0
66	TP-ParadigmWithCopyNumber	1	0	0	0
67	TP-ParadigmWithRNASeq	1	0	0	0
68	TP-ParadigmWithRNASeqAndCopyNumber	1	0	0	0
69	TP-Pathway_FindEnrichedGenes	1	0	0	0
70	TP-ProcessCoverageForMutSig2.0	1	0	0	0
71	TP-RPPA_Clustering_CNMF	1	0	0	0
72	TP-RPPA_Clustering_Consensus	1	0	0	0
	Total	49	2	13	8

This table generated on Tue Feb 12 11:59:49 2013

Broad GDAC Analyses Status analyses__2013_01_16__pancan12 Run for Tumor Type: PANCAN12

Broad GDAC Analyses Status
analyses__2013_01_16__pancan12 Run for Tumor Type: PANCAN12