
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_TopgenesforCluster.35.3911/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_TopgenesforCluster.35.3911/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/LGG-TP/2401732/0.GDAC_MethylationPreprocess.Finished/LGG-TP.meth.for_clustering.filtered_data.txt", "-u8481", "-ooutputprefix")
Cluster size 8481 broken into 4448 4033 
Cluster size 4448 broken into 3067 1381 
Cluster size 3067 broken into 1311 1756 
Done cluster 1311 
Cluster size 1756 broken into 1074 682 
Done cluster 1074 
Done cluster 682 
Done cluster 1756 
Done cluster 3067 
Done cluster 1381 
Done cluster 4448 
Cluster size 4033 broken into 1884 2149 
Cluster size 1884 broken into 1269 615 
Done cluster 1269 
Done cluster 615 
Done cluster 1884 
Cluster size 2149 broken into 905 1244 
Done cluster 905 
Done cluster 1244 
Done cluster 2149 
Done cluster 4033 
> q(save="no")
