		Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		HISTOLOGICAL.TYPE		PATHOLOGY.T		PATHOLOGY.N		PATHOLOGICSPREAD(M)		TUMOR.STAGE		RADIATIONS.RADIATION.REGIMENINDICATION		NUMBERPACKYEARSSMOKED		STOPPEDSMOKINGYEAR		TOBACCOSMOKINGHISTORYINDICATOR		YEAROFTOBACCOSMOKINGONSET	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q
Amp Peak  1(1p34.3)	95 (29%)	232	0.91053	1	0.0092728	1	0.80805	1	0.42075	1	0.49788	1	0.73037	1	0.21929	1	0.8546	1	0.58322	1	0.45206	1	0.88833	1	0.60006	1	0.056488	1	0.80238	1
Amp Peak  2(1p22.3)	92 (28%)	235	0.75476	1	0.00065965	0.703	1	1	0.6086	1	0.11993	1	0.88588	1	0.058509	1	0.43169	1	0.28389	1	0.45354	1	0.40311	1	0.38785	1	0.54668	1	0.44436	1
Amp Peak  3(1q21.3)	239 (73%)	88	0.33392	1	0.28166	1	0.060141	1	0.31141	1	0.025465	1	0.69577	1	0.84533	1	0.85201	1	0.90038	1	0.30012	1	0.62619	1	0.56975	1	0.23705	1	0.29501	1
Amp Peak  4(3q26.2)	118 (36%)	209	0.89167	1	0.44423	1	1	1	0.72596	1	0.84472	1	0.75488	1	0.23758	1	0.38434	1	0.56716	1	0.34375	1	0.14223	1	0.024351	1	0.01662	1	0.092192	1
Amp Peak  5(4q12)	66 (20%)	261	0.2248	1	0.0098058	1	0.78305	1	0.90175	1	0.29394	1	0.087614	1	0.43875	1	0.48045	1	0.59584	1	0.77492	1	0.98713	1	0.59476	1	0.96494	1	0.24601	1
Amp Peak  6(5p15.33)	215 (66%)	112	0.19429	1	0.0044919	1	0.0099457	1	0.026303	1	0.15844	1	0.12673	1	0.54527	1	0.4508	1	0.49338	1	0.46964	1	0.19451	1	0.026345	1	0.13912	1	0.19916	1
Amp Peak  7(5p13.1)	193 (59%)	134	0.11117	1	0.012104	1	0.041963	1	0.86666	1	0.28228	1	0.17807	1	0.34879	1	0.82362	1	0.52184	1	1	1	0.035764	1	0.025092	1	0.30528	1	0.55694	1
Amp Peak  8(5q35.1)	79 (24%)	248	0.10176	1	0.28962	1	0.02726	1	0.97064	1	0.50642	1	0.39153	1	0.58632	1	0.76969	1	0.64045	1	0.58985	1	0.55293	1	0.4505	1	0.061025	1	0.14803	1
Amp Peak  9(6p25.3)	130 (40%)	197	0.51869	1	0.20595	1	0.42727	1	0.86285	1	0.44359	1	0.57008	1	0.017786	1	0.33117	1	0.094332	1	0.35347	1	0.52652	1	0.57094	1	0.096891	1	0.40737	1
Amp Peak 10(6p21.1)	120 (37%)	207	0.64771	1	0.41716	1	0.24952	1	0.92355	1	0.77909	1	0.52414	1	0.097267	1	0.2035	1	0.54104	1	0.6356	1	0.78625	1	0.60828	1	0.030872	1	0.62355	1
Amp Peak 11(7p21.1)	179 (55%)	148	0.75995	1	0.33733	1	0.26714	1	0.90794	1	0.38885	1	0.17929	1	0.052615	1	0.71352	1	0.28118	1	1	1	0.64113	1	0.60068	1	0.024286	1	0.6819	1
Amp Peak 12(7p11.2)	172 (53%)	155	0.18019	1	0.11256	1	0.43643	1	0.69487	1	0.32227	1	0.12922	1	0.0071224	1	0.77611	1	0.15784	1	0.82176	1	0.60587	1	0.5526	1	0.0496	1	0.10109	1
Amp Peak 13(7q31.2)	136 (42%)	191	0.97639	1	0.055245	1	0.73667	1	0.37565	1	0.55481	1	0.37588	1	0.18555	1	0.39997	1	0.35307	1	0.24492	1	0.42906	1	0.23132	1	0.31265	1	0.98367	1
Amp Peak 14(8p11.21)	100 (31%)	227	0.82956	1	0.15496	1	0.070807	1	0.14262	1	0.12266	1	0.78045	1	0.23547	1	0.28463	1	0.31337	1	0.62563	1	0.78211	1	0.22989	1	0.14172	1	0.65264	1
Amp Peak 15(8q11.1)	148 (45%)	179	0.82991	1	0.026134	1	0.65722	1	0.91286	1	0.15978	1	0.71476	1	0.34292	1	0.61517	1	0.50516	1	1	1	0.2968	1	0.43401	1	0.017149	1	0.11632	1
Amp Peak 16(8q24.21)	204 (62%)	123	0.234	1	0.08928	1	0.64676	1	0.8848	1	0.0735	1	0.45676	1	0.71048	1	0.83592	1	0.85927	1	0.63482	1	0.51575	1	0.58779	1	0.050874	1	0.66943	1
Amp Peak 17(10p15.1)	91 (28%)	236	0.12546	1	0.40697	1	0.062942	1	0.57095	1	0.50147	1	0.70702	1	0.013145	1	0.85659	1	0.48035	1	0.60719	1	0.013411	1	0.00019339	0.207	3.6535e-06	0.00393	0.82683	1
Amp Peak 18(11q13.3)	114 (35%)	213	0.80435	1	2.7431e-05	0.0295	0.24377	1	0.51865	1	0.62269	1	0.69543	1	0.78837	1	0.53554	1	0.14936	1	0.8097	1	0.91244	1	0.079205	1	0.010736	1	0.57608	1
Amp Peak 19(12p12.1)	118 (36%)	209	0.036146	1	0.29952	1	0.81717	1	0.8207	1	0.59826	1	0.56012	1	0.75878	1	0.38227	1	0.86573	1	0.81082	1	0.84881	1	0.24099	1	0.08858	1	0.21838	1
Amp Peak 20(12q14.1)	106 (32%)	221	0.18768	1	0.074418	1	0.6371	1	0.55822	1	0.80618	1	0.56673	1	0.74825	1	0.44524	1	0.37611	1	1	1	0.40792	1	0.00059823	0.638	0.050405	1	0.0010154	1
Amp Peak 21(12q15)	109 (33%)	218	0.44872	1	0.21339	1	0.72453	1	0.32128	1	0.82769	1	0.77696	1	0.53187	1	0.72087	1	0.66779	1	1	1	0.2374	1	0.026026	1	0.029998	1	0.0032645	1
Amp Peak 22(13q33.3)	54 (17%)	273	0.89646	1	0.82053	1	0.13418	1	NA	NA	0.93382	1	0.4232	1	0.49167	1	0.63372	1	0.69533	1	1	1	0.39227	1	0.84501	1	0.66294	1	0.96733	1
Amp Peak 23(14q13.3)	143 (44%)	184	0.37093	1	0.66861	1	0.57638	1	0.53775	1	0.56613	1	0.72597	1	0.93427	1	0.17554	1	0.69868	1	0.49032	1	0.8652	1	0.0886	1	0.27813	1	0.079651	1
Amp Peak 24(17q12)	148 (45%)	179	0.90429	1	0.87942	1	0.82441	1	0.098111	1	0.59245	1	0.49266	1	0.52297	1	0.35303	1	0.55106	1	0.10258	1	0.01592	1	0.073652	1	0.22369	1	0.69189	1
Amp Peak 25(17q23.1)	160 (49%)	167	0.56064	1	0.33467	1	0.65681	1	0.59121	1	0.1768	1	0.31086	1	0.4012	1	0.38824	1	0.61229	1	0.648	1	0.065901	1	0.02611	1	0.13278	1	0.37223	1
Amp Peak 26(18p11.32)	86 (26%)	241	0.17197	1	0.32136	1	0.80187	1	0.88168	1	0.57997	1	0.71926	1	0.36192	1	0.80553	1	0.95143	1	0.30168	1	0.17776	1	0.10517	1	0.37864	1	0.35483	1
Amp Peak 27(18q11.2)	70 (21%)	257	0.97176	1	0.70975	1	0.41702	1	0.75249	1	0.059179	1	0.9056	1	0.48641	1	0.18777	1	0.40257	1	0.26685	1	0.4832	1	0.65737	1	0.096644	1	0.80983	1
Amp Peak 28(19q12)	91 (28%)	236	0.70618	1	0.60085	1	0.10717	1	0.25859	1	0.40857	1	0.43618	1	0.65982	1	0.92553	1	0.57048	1	0.30146	1	0.43495	1	0.013666	1	0.79137	1	0.27798	1
Amp Peak 29(20q11.21)	144 (44%)	183	0.50653	1	0.66091	1	1	1	0.19232	1	0.40748	1	0.017329	1	0.24227	1	0.05869	1	0.21558	1	0.24709	1	0.0073089	1	0.6869	1	0.40014	1	0.17552	1
Amp Peak 30(20q13.33)	160 (49%)	167	0.43978	1	0.41974	1	0.82419	1	0.27394	1	0.11902	1	0.12844	1	0.18595	1	0.099801	1	0.034477	1	0.49182	1	0.36068	1	0.11866	1	0.16503	1	0.86551	1
Amp Peak 31(22q11.22)	54 (17%)	273	0.29893	1	0.48925	1	0.36962	1	NA	NA	0.42376	1	0.44418	1	0.43456	1	0.045676	1	0.23648	1	1	1	0.85535	1	0.62076	1	0.70969	1	0.57446	1
Amp Peak 32(Xq28)	113 (35%)	214	0.19464	1	0.19142	1	0.19894	1	0.28784	1	0.38227	1	0.57725	1	0.33034	1	0.5199	1	0.45968	1	1	1	0.27267	1	0.93012	1	0.050768	1	0.93699	1
Del Peak  1(1p36.13)	77 (24%)	250	0.035597	1	0.59798	1	0.067552	1	0.4475	1	0.6684	1	0.092556	1	0.071205	1	0.47264	1	0.077863	1	0.5857	1	0.94103	1	0.68234	1	0.42604	1	0.7503	1
Del Peak  2(1p13.1)	98 (30%)	229	0.67048	1	0.14287	1	0.46733	1	0.74594	1	0.6528	1	0.37926	1	0.54186	1	0.59276	1	0.11946	1	1	1	0.41154	1	0.47693	1	0.81238	1	0.58055	1
Del Peak  3(2q22.1)	37 (11%)	290	0.8604	1	0.59057	1	1	1	0.90089	1	0.24754	1	0.18101	1	0.63563	1	0.26137	1	0.13746	1	1	1	0.12434	1	0.07744	1	0.086111	1	0.57891	1
Del Peak  4(2q37.3)	54 (17%)	273	0.39728	1	0.88933	1	0.071939	1	0.56077	1	0.099411	1	0.82322	1	0.07397	1	0.25333	1	0.55033	1	0.054854	1	0.84271	1	0.84576	1	0.19538	1	0.40343	1
Del Peak  5(3p26.3)	152 (46%)	175	0.98361	1	0.82072	1	0.22095	1	0.39917	1	0.70479	1	0.0021343	1	0.17719	1	0.081158	1	0.039456	1	0.16581	1	0.45366	1	0.072214	1	0.020658	1	0.0014385	1
Del Peak  6(3p21.31)	163 (50%)	164	0.5695	1	0.40489	1	0.5791	1	0.063787	1	0.57882	1	0.0071183	1	0.030967	1	0.44177	1	0.13998	1	0.24814	1	0.74305	1	0.023299	1	0.015987	1	5.0685e-05	0.0544
Del Peak  7(3q11.1)	97 (30%)	230	0.42521	1	0.10669	1	0.39484	1	0.082433	1	0.95943	1	0.81836	1	0.86758	1	0.8843	1	0.55909	1	0.8023	1	0.13734	1	0.70476	1	0.87117	1	0.015903	1
Del Peak  8(3q29)	95 (29%)	232	0.75893	1	0.55849	1	0.80805	1	0.36745	1	0.58741	1	0.46976	1	0.13353	1	0.60095	1	0.12116	1	0.45206	1	0.18919	1	0.69583	1	0.68559	1	0.15325	1
Del Peak  9(4p15.2)	77 (24%)	250	0.89064	1	0.14277	1	0.5133	1	0.87135	1	0.45755	1	0.65986	1	0.35817	1	1	1	0.43777	1	0.27359	1	0.33221	1	0.0013228	1	0.069675	1	0.1913	1
Del Peak 10(4q22.1)	100 (31%)	227	0.46238	1	0.72355	1	0.71814	1	0.18699	1	0.48366	1	0.58265	1	0.034185	1	0.34031	1	0.03274	1	0.33009	1	0.90249	1	0.34844	1	0.063878	1	0.33741	1
Del Peak 11(4q35.1)	120 (37%)	207	0.75625	1	0.14248	1	0.2059	1	0.18823	1	0.089463	1	0.18889	1	0.28691	1	0.19414	1	0.28279	1	0.23407	1	0.47509	1	0.089787	1	0.0015735	1	0.19388	1
Del Peak 12(5q11.2)	116 (35%)	211	0.29754	1	0.033766	1	0.90819	1	0.47026	1	0.43554	1	0.30947	1	0.028346	1	0.48162	1	0.10972	1	0.3479	1	0.12314	1	0.00049359	0.528	0.088905	1	0.28727	1
Del Peak 13(5q34)	113 (35%)	214	0.31802	1	0.00056085	0.599	0.29334	1	0.81712	1	0.2336	1	0.72526	1	0.16666	1	1	1	0.13322	1	0.46907	1	0.15186	1	6.1038e-05	0.0654	5.8223e-07	0.000626	0.015401	1
Del Peak 14(6q12)	116 (35%)	211	0.16955	1	0.77609	1	0.24555	1	0.19239	1	0.3499	1	0.71131	1	0.05703	1	0.44319	1	0.049754	1	0.4697	1	0.019281	1	0.49488	1	0.022572	1	0.09778	1
Del Peak 15(6q22.31)	168 (51%)	159	0.45639	1	0.36524	1	1	1	0.18945	1	0.90776	1	0.6792	1	0.72522	1	0.44047	1	0.41441	1	1	1	0.19028	1	0.086858	1	0.1535	1	0.45201	1
Del Peak 16(6q26)	171 (52%)	156	0.52413	1	0.17133	1	0.73968	1	0.2708	1	0.86835	1	0.96148	1	0.46533	1	0.10219	1	0.15579	1	1	1	0.726	1	0.14616	1	0.37151	1	0.30291	1
Del Peak 17(8p23.2)	164 (50%)	163	0.69172	1	0.29315	1	0.26742	1	0.044627	1	0.011837	1	0.38182	1	0.81835	1	0.93935	1	0.87063	1	0.48973	1	0.76321	1	0.87426	1	0.041052	1	0.23463	1
Del Peak 18(8p21.3)	175 (54%)	152	0.23971	1	0.9776	1	0.11959	1	0.049446	1	0.011426	1	0.58627	1	0.4512	1	0.31852	1	0.9078	1	0.64648	1	0.28035	1	0.2891	1	0.13228	1	0.49532	1
Del Peak 19(9p23)	180 (55%)	147	0.061433	1	0.093606	1	0.73908	1	0.6137	1	0.74983	1	0.85589	1	0.011587	1	0.71352	1	0.35573	1	0.4875	1	0.84774	1	0.035563	1	0.071506	1	0.27674	1
Del Peak 20(9p21.3)	187 (57%)	140	0.37358	1	0.032687	1	0.11604	1	0.8207	1	0.83082	1	0.94066	1	0.002825	1	0.75623	1	0.087354	1	1	1	0.45973	1	0.0042678	1	0.15198	1	0.18937	1
Del Peak 21(9q21.11)	160 (49%)	167	0.22246	1	0.71387	1	0.65681	1	0.90804	1	0.047121	1	0.38572	1	0.38514	1	0.73018	1	0.43018	1	0.10584	1	0.065564	1	0.90091	1	0.32418	1	0.76921	1
Del Peak 22(10p15.3)	81 (25%)	246	0.15444	1	0.53656	1	5.8073e-05	0.0623	0.85084	1	0.46332	1	0.3932	1	0.66245	1	0.37054	1	0.8304	1	0.79122	1	0.53897	1	0.58015	1	0.0044639	1	0.75052	1
Del Peak 23(10q26.3)	90 (28%)	237	0.66495	1	0.89731	1	0.034516	1	0.23586	1	0.66634	1	0.06392	1	0.45475	1	0.97475	1	0.19757	1	0.075482	1	0.026927	1	0.83992	1	0.025692	1	0.066835	1
Del Peak 24(11p15.5)	88 (27%)	239	0.51817	1	0.072155	1	0.31782	1	0.31815	1	0.28697	1	1	1	1	1	0.061391	1	0.32555	1	1	1	0.32507	1	0.71495	1	0.014911	1	0.13066	1
Del Peak 25(11q25)	73 (22%)	254	0.26009	1	0.52263	1	0.50495	1	0.53452	1	0.72225	1	0.74192	1	0.21492	1	0.44112	1	0.73276	1	0.58228	1	0.34907	1	0.90147	1	0.34736	1	0.15229	1
Del Peak 26(12p13.2)	91 (28%)	236	0.28224	1	0.82263	1	0.0012294	1	0.78816	1	0.69989	1	0.82531	1	0.90584	1	0.35059	1	0.51817	1	0.80045	1	0.014125	1	0.62896	1	0.29937	1	0.05224	1
Del Peak 27(12q12)	60 (18%)	267	0.2296	1	0.085894	1	0.25331	1	0.69255	1	0.25708	1	0.48139	1	0.5047	1	0.13679	1	0.52777	1	1	1	0.057367	1	0.62225	1	0.9542	1	0.29289	1
Del Peak 28(12q24.33)	80 (24%)	247	0.48798	1	0.83039	1	0.19746	1	0.39223	1	0.085086	1	0.06646	1	0.8985	1	0.4132	1	0.69208	1	0.17806	1	0.18965	1	0.86087	1	0.015358	1	0.37566	1
Del Peak 29(13q12.11)	180 (55%)	147	0.60623	1	0.13071	1	0.010504	1	0.025228	1	0.026143	1	0.56194	1	0.98658	1	0.34254	1	0.83926	1	0.36446	1	0.031831	1	0.20635	1	0.01346	1	0.18024	1
Del Peak 30(13q12.13)	181 (55%)	146	0.72162	1	0.30977	1	0.045041	1	0.039932	1	0.010766	1	0.72359	1	0.885	1	0.34254	1	0.85812	1	0.16998	1	0.12704	1	0.65767	1	0.055182	1	0.17612	1
Del Peak 31(13q34)	147 (45%)	180	0.77075	1	0.10316	1	0.82332	1	0.66855	1	0.29945	1	0.63605	1	0.98658	1	0.11929	1	0.30568	1	1	1	0.49717	1	0.27535	1	0.082221	1	0.12108	1
Del Peak 32(14q32.33)	99 (30%)	228	0.41087	1	0.95788	1	1	1	0.78616	1	0.35145	1	0.40245	1	0.26987	1	0.52438	1	0.54391	1	0.62234	1	0.14782	1	0.90534	1	0.24943	1	0.049904	1
Del Peak 33(15q11.2)	171 (52%)	156	0.32414	1	0.089758	1	0.045182	1	0.24143	1	0.11574	1	0.24616	1	0.96055	1	0.97906	1	0.56226	1	1	1	0.37293	1	0.20704	1	0.25358	1	0.18844	1
Del Peak 34(15q15.3)	177 (54%)	150	0.4337	1	0.12877	1	0.11983	1	0.24143	1	0.01834	1	0.39741	1	0.9866	1	0.95856	1	0.89825	1	0.64876	1	0.80068	1	0.16729	1	0.11428	1	0.24683	1
Del Peak 35(16q23.3)	118 (36%)	209	0.95434	1	0.76875	1	0.72974	1	0.62212	1	0.40361	1	0.50328	1	0.20782	1	0.70896	1	0.5059	1	1	1	0.20488	1	0.31843	1	0.13359	1	0.86996	1
Del Peak 36(17p13.3)	188 (57%)	139	0.64174	1	0.15994	1	0.17925	1	0.77821	1	0.049334	1	0.23721	1	0.90828	1	0.70629	1	0.82626	1	0.25345	1	0.41774	1	0.48193	1	0.12109	1	0.0086888	1
Del Peak 37(18q21.32)	170 (52%)	157	0.24412	1	0.33993	1	0.095222	1	0.30054	1	0.70336	1	0.26603	1	0.16891	1	0.069941	1	0.045826	1	1	1	0.4942	1	0.85518	1	0.25026	1	0.15158	1
Del Peak 38(18q23)	164 (50%)	163	0.32912	1	0.11979	1	0.075842	1	0.31777	1	0.40962	1	0.073755	1	0.064473	1	0.30514	1	0.0027625	1	1	1	0.35577	1	0.41935	1	0.29294	1	0.040745	1
Del Peak 39(19p13.3)	184 (56%)	143	0.048902	1	0.28295	1	0.0024852	1	0.80204	1	0.46935	1	0.241	1	0.15716	1	0.46292	1	0.017413	1	0.81851	1	0.50134	1	0.58391	1	0.15163	1	0.24516	1
Del Peak 40(19p13.2)	177 (54%)	150	0.36071	1	0.041068	1	0.0011931	1	0.92285	1	0.59487	1	0.26415	1	0.093047	1	0.13881	1	0.030566	1	0.81789	1	0.45881	1	0.46976	1	0.037205	1	0.22816	1
Del Peak 41(19q11)	95 (29%)	232	0.0062231	1	0.011164	1	1	1	0.53952	1	0.84937	1	0.39377	1	0.08598	1	0.27509	1	0.0038388	1	0.80302	1	0.0588	1	0.31409	1	0.0068908	1	0.065122	1
Del Peak 42(19q13.33)	123 (38%)	204	0.038427	1	0.19303	1	0.35929	1	0.46539	1	0.18701	1	0.55722	1	0.5908	1	0.16727	1	0.14564	1	0.81573	1	0.45034	1	0.90176	1	0.25784	1	0.5128	1
Del Peak 43(21q11.2)	116 (35%)	211	0.61898	1	0.0607	1	0.90819	1	0.75054	1	0.39067	1	0.70472	1	0.91638	1	0.9132	1	0.78043	1	0.4697	1	0.13337	1	0.050186	1	0.015808	1	0.013118	1
Del Peak 44(22q13.32)	160 (49%)	167	0.47493	1	0.019961	1	0.22347	1	0.53651	1	0.36235	1	0.76244	1	0.67746	1	0.71428	1	0.72092	1	0.81904	1	0.502	1	0.11166	1	0.0010858	1	0.0059115	1
Del Peak 45(Xp22.2)	96 (29%)	231	0.55994	1	0.66573	1	0.039013	1	0.93062	1	0.6531	1	0.91252	1	0.42827	1	0.79482	1	0.89404	1	0.80256	1	0.64037	1	0.65054	1	0.62427	1	0.16993	1
