# Created: Tue Jan 29 20:26:20 EST 2013 by cgaadm_deadline
# Job: 303112    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: cnvarms2cluster urn:lsid:broadinstitute.org:cancer.genome.analysis:00499:3
# Parameters: 
#    sample.gene.table.file = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/Gistic2_Pipeline/UCEC-TP/2403803/1.Gistic2_Analysis.Finished/broad_values_by_arm.txt
#    maf.file = 
#    sig.gene.file = 
#    sig.gene.q.cutoff = 0.01
#    output.name = 
