Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		NUMBERPACKYEARSSMOKED		STOPPEDSMOKINGYEAR		TOBACCOSMOKINGHISTORYINDICATOR	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q
Amp Peak  1(1p34.2)	33 (29%)	81	0.55129	1	0.43872	1	0.17134	1	0.20539	1	0.60093	1	0.82558	1	0.83953	1
Amp Peak  2(1q21.3)	57 (50%)	57	0.35135	1	0.53517	1	1	1	0.31089	1	0.21482	1	0.27583	1	0.30091	1
Amp Peak  3(1q23.3)	61 (54%)	53	0.65042	1	0.55267	1	0.83539	1	0.26093	1	0.70998	1	0.48283	1	0.44432	1
Amp Peak  4(3p25.2)	55 (48%)	59	0.047699	1	0.54474	1	0.13979	1	0.21547	1	0.47081	1	0.27839	1	0.22363	1
Amp Peak  5(3q26.32)	68 (60%)	46	0.016765	1	0.91729	1	0.83365	1	0.60528	1	0.83894	1	0.30341	1	0.50976	1
Amp Peak  6(4p16.3)	26 (23%)	88	0.030271	1	0.63634	1	0.046682	1	0.426	1	0.90433	1	0.40433	1	0.47053	1
Amp Peak  7(4q13.3)	16 (14%)	98	0.44466	1	0.13034	1	0.036139	1	9.4561e-05	0.0364	0.63303	1	0.78525	1	0.95464	1
Amp Peak  8(5p15.33)	53 (46%)	61	0.68157	1	0.35164	1	0.39931	1	0.24079	1	0.40965	1	0.45329	1	0.25573	1
Amp Peak  9(6p22.3)	46 (40%)	68	0.33796	1	0.52374	1	0.5286	1	0.61703	1	0.91341	1	0.30584	1	0.30834	1
Amp Peak 10(6q12)	21 (18%)	93	0.15723	1	0.087671	1	0.056796	1	0.36476	1	0.30932	1	0.42098	1	0.22643	1
Amp Peak 11(7p11.2)	59 (52%)	55	0.67386	1	0.075137	1	0.52799	1	0.59601	1	0.67601	1	0.56517	1	0.2068	1
Amp Peak 12(8p11.23)	39 (34%)	75	0.37073	1	0.90395	1	0.51463	1	0.96759	1	0.15232	1	0.010885	1	0.45456	1
Amp Peak 13(8q22.3)	72 (63%)	42	0.125	1	0.81818	1	0.052565	1	0.49275	1	0.32849	1	0.83966	1	0.84196	1
Amp Peak 14(10p15.1)	51 (45%)	63	0.98437	1	0.10307	1	1	1	0.74723	1	0.78225	1	0.33508	1	0.33385	1
Amp Peak 15(11q13.3)	45 (39%)	69	0.99249	1	0.4529	1	0.83033	1	0.63818	1	0.35596	1	0.9321	1	0.048104	1
Amp Peak 16(12q15)	40 (35%)	74	0.63341	1	0.75963	1	0.50994	1	0.51712	1	0.30515	1	0.44968	1	0.26412	1
Amp Peak 17(13q22.1)	41 (36%)	73	0.43743	1	0.13695	1	1	1	0.76831	1	0.14038	1	0.33226	1	0.42327	1
Amp Peak 18(16p12.1)	32 (28%)	82	0.76669	1	0.71704	1	1	1	0.32819	1	0.61716	1	0.32088	1	0.97452	1
Amp Peak 19(17q11.2)	56 (49%)	58	0.89364	1	0.48954	1	1	1	0.013786	1	0.82946	1	0.084243	1	0.8856	1
Amp Peak 20(17q12)	51 (45%)	63	0.36629	1	0.5297	1	1	1	0.048347	1	0.55739	1	0.4027	1	0.54935	1
Amp Peak 21(19q12)	51 (45%)	63	0.22135	1	0.21571	1	1	1	0.41443	1	0.25433	1	0.087028	1	0.34682	1
Amp Peak 22(19q13.43)	51 (45%)	63	0.14314	1	0.25397	1	0.67572	1	0.39582	1	0.41063	1	0.16011	1	0.69692	1
Amp Peak 23(20q11.21)	83 (73%)	31	0.43368	1	0.46206	1	0.81544	1	0.64375	1	0.0085694	1	0.17595	1	0.87892	1
Amp Peak 24(22q11.23)	29 (25%)	85	0.016862	1	0.47038	1	0.089345	1	0.8086	1	0.4727	1	0.91631	1	0.27571	1
Del Peak  1(1p36.11)	22 (19%)	92	0.31597	1	0.12574	1	0.79075	1	0.88733	1	0.38236	1	0.36989	1	0.47827	1
Del Peak  2(1q32.1)	24 (21%)	90	0.64216	1	0.14901	1	0.020315	1	0.60198	1	0.014462	1	0.071902	1	0.59685	1
Del Peak  3(2q22.1)	37 (32%)	77	0.30075	1	0.76543	1	0.11446	1	0.4606	1	0.91885	1	0.58941	1	0.21816	1
Del Peak  4(2q34)	52 (46%)	62	0.36465	1	0.34151	1	0.67687	1	0.53801	1	0.23634	1	0.91172	1	0.23911	1
Del Peak  5(2q37.1)	62 (54%)	52	0.51355	1	0.46275	1	0.056673	1	0.35123	1	0.10261	1	0.55333	1	0.43829	1
Del Peak  6(3p21.31)	38 (33%)	76	0.85053	1	0.91256	1	0.82473	1	0.73158	1	0.17708	1	0.52765	1	0.08597	1
Del Peak  7(3p14.2)	39 (34%)	75	0.25104	1	0.43472	1	1	1	0.73158	1	0.71106	1	0.53988	1	0.058458	1
Del Peak  8(3p12.3)	35 (31%)	79	0.38986	1	0.10405	1	0.82313	1	0.14385	1	0.54757	1	0.99408	1	0.17174	1
Del Peak  9(4q22.1)	46 (40%)	68	0.79588	1	0.14732	1	0.14121	1	0.80117	1	0.88784	1	0.41376	1	0.11582	1
Del Peak 10(4q34.2)	53 (46%)	61	0.53129	1	0.15759	1	1	1	0.56213	1	0.2147	1	0.073183	1	0.74303	1
Del Peak 11(5q11.2)	57 (50%)	57	0.59064	1	0.011942	1	0.40007	1	0.63686	1	0.20328	1	0.90809	1	0.71949	1
Del Peak 12(6p25.3)	33 (29%)	81	0.26215	1	0.74009	1	0.17134	1	0.1306	1	0.81878	1	0.60895	1	0.28605	1
Del Peak 13(6q21)	48 (42%)	66	0.14603	1	0.27481	1	1	1	0.85983	1	0.29666	1	0.72513	1	0.66402	1
Del Peak 14(6q27)	51 (45%)	63	0.026066	1	0.62119	1	0.5267	1	0.30851	1	0.92633	1	0.84531	1	0.16124	1
Del Peak 15(8p23.3)	60 (53%)	54	0.84705	1	0.74172	1	0.67456	1	0.98179	1	0.58912	1	0.19473	1	0.97046	1
Del Peak 16(8p21.1)	65 (57%)	49	0.57545	1	0.53651	1	0.29172	1	0.64734	1	0.8654	1	0.52243	1	0.30885	1
Del Peak 17(9p21.3)	66 (58%)	48	0.66117	1	0.92525	1	0.52292	1	0.9325	1	0.093501	1	0.28691	1	0.46415	1
Del Peak 18(10p12.1)	24 (21%)	90	0.86913	1	0.34811	1	0.80062	1	0.57117	1	0.42897	1	0.67194	1	0.036532	1
Del Peak 19(10q23.31)	49 (43%)	65	0.99843	1	0.018416	1	0.83316	1	0.070306	1	0.73359	1	0.5944	1	0.37007	1
Del Peak 20(11p15.4)	62 (54%)	52	0.60874	1	0.013614	1	0.83311	1	0.018969	1	0.46621	1	0.12927	1	0.49388	1
Del Peak 21(11q25)	37 (32%)	77	0.9079	1	0.5418	1	1	1	0.89491	1	0.37442	1	0.75506	1	0.1167	1
Del Peak 22(13q14.2)	46 (40%)	68	0.54062	1	0.13863	1	0.39107	1	0.70628	1	0.37425	1	0.51071	1	0.021654	1
Del Peak 23(14q12)	33 (29%)	81	0.3144	1	0.36499	1	0.2456	1	0.43407	1	0.059128	1	0.60413	1	0.8217	1
Del Peak 24(14q32.31)	33 (29%)	81	0.73045	1	0.2226	1	0.10281	1	0.26742	1	0.18647	1	0.31587	1	0.43894	1
Del Peak 25(15q13.1)	42 (37%)	72	0.16881	1	0.30882	1	0.66353	1	0.24414	1	0.30304	1	0.39853	1	0.032163	1
Del Peak 26(16p13.3)	40 (35%)	74	0.54245	1	0.62353	1	0.82632	1	0.99521	1	0.69533	1	0.59131	1	0.49885	1
Del Peak 27(16q23.1)	29 (25%)	85	0.29663	1	0.74169	1	1	1	0.10522	1	0.90517	1	0.22443	1	0.0028636	1
Del Peak 28(17p12)	60 (53%)	54	0.013051	1	0.62777	1	0.67456	1	0.7345	1	0.89396	1	0.79286	1	0.81217	1
Del Peak 29(19p13.3)	44 (39%)	70	0.99159	1	0.58437	1	0.39527	1	0.45887	1	0.59764	1	0.36359	1	0.46849	1
Del Peak 30(22q13.31)	45 (39%)	69	0.99209	1	0.71366	1	0.52016	1	0.078902	1	0.6687	1	0.44557	1	0.10391	1
Del Peak 31(Xq21.33)	28 (25%)	86	0.45965	1	0.88459	1	1	1	0.44869	1	0.88321	1	0.24302	1	0.027912	1