Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE HISTOLOGICAL.TYPE PATHOLOGY.T PATHOLOGY.N PATHOLOGICSPREAD(M) TUMOR.STAGE RADIATIONS.RADIATION.REGIMENINDICATION NUMBERPACKYEARSSMOKED STOPPEDSMOKINGYEAR TOBACCOSMOKINGHISTORYINDICATOR YEAROFTOBACCOSMOKINGONSET nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q 1p gain 21 (6%) 304 0.76675 1 0.30605 1 0.071365 1 NA NA 3.7874e-06 0.0041 0.067498 1 1 1 0.26829 1 0.15078 1 0.52609 1 0.44874 1 0.35934 1 0.40812 1 0.24488 1 1q gain 69 (21%) 256 0.62396 1 0.49869 1 0.87782 1 0.3579 1 0.0045343 1 0.105 1 0.74013 1 0.2669 1 0.52895 1 1 1 0.27183 1 0.90917 1 0.86585 1 0.69277 1 2p gain 76 (23%) 249 0.81202 1 0.89843 1 0.070594 1 0.12597 1 0.010599 1 0.12476 1 0.24692 1 0.17264 1 0.16935 1 0.29118 1 0.057986 1 0.28384 1 0.72581 1 0.024319 1 2q gain 35 (11%) 290 0.51126 1 0.99554 1 0.83833 1 0.61082 1 5.7778e-05 0.0625 0.086521 1 0.66094 1 0.19847 1 0.0063081 1 0.33588 1 0.52841 1 0.18492 1 0.94366 1 0.72274 1 3p gain 35 (11%) 290 0.39284 1 0.13731 1 0.14937 1 0.19686 1 0.97797 1 0.056409 1 0.87066 1 0.50698 1 0.51092 1 1 1 0.35598 1 0.25557 1 0.1133 1 0.056065 1 3q gain 148 (46%) 177 0.63278 1 0.25112 1 0.70223 1 0.33369 1 0.35421 1 0.56846 1 0.88738 1 0.43723 1 0.6675 1 1 1 0.79716 1 0.77391 1 0.047371 1 0.01595 1 4p gain 14 (4%) 311 0.33008 1 0.63565 1 0.024769 1 0.7119 1 0.7632 1 0.13091 1 1 1 0.69225 1 0.63184 1 1 1 0.35385 1 0.94136 1 0.75761 1 0.40403 1 4q gain 6 (2%) 319 0.88845 1 0.44204 1 0.34396 1 NA NA 0.18818 1 0.089019 1 0.66324 1 1 1 0.066887 1 1 1 0.17223 1 0.28566 1 0.12195 1 NA NA 5p gain 149 (46%) 176 0.46389 1 0.065179 1 0.44705 1 0.66304 1 0.31445 1 0.061046 1 0.40168 1 0.46577 1 0.62625 1 1 1 0.52943 1 0.76088 1 0.057726 1 0.74019 1 5q gain 32 (10%) 293 0.64238 1 0.35107 1 0.67588 1 0.4533 1 0.97513 1 0.92788 1 0.53483 1 0.83544 1 0.68946 1 0.29596 1 0.70641 1 0.78527 1 0.78503 1 0.31962 1 6p gain 30 (9%) 295 0.75549 1 0.34301 1 0.82955 1 0.28646 1 0.029537 1 0.11762 1 0.91513 1 0.45152 1 0.17836 1 0.26935 1 0.27922 1 0.15006 1 0.78671 1 0.01309 1 6q gain 17 (5%) 308 0.77924 1 0.45487 1 1 1 0.4632 1 0.00092943 1 0.6113 1 0.74027 1 0.73527 1 1 1 0.45148 1 0.1644 1 0.73317 1 0.86956 1 0.1894 1 7p gain 88 (27%) 237 0.1885 1 0.11518 1 0.56732 1 0.74284 1 0.73611 1 0.0094464 1 0.78324 1 0.31911 1 0.58337 1 0.7335 1 0.054031 1 0.29395 1 0.5834 1 0.24456 1 7q gain 84 (26%) 241 0.39843 1 0.28421 1 0.38367 1 0.47981 1 0.46341 1 0.010228 1 0.67752 1 0.11743 1 0.27897 1 0.73491 1 0.74143 1 0.037238 1 0.81159 1 0.39719 1 8p gain 46 (14%) 279 0.89024 1 0.39873 1 1 1 0.0063787 1 0.10494 1 0.6027 1 0.48708 1 0.07475 1 0.21621 1 0.19324 1 0.73769 1 0.84291 1 0.63781 1 0.44394 1 8q gain 95 (29%) 230 0.37567 1 0.74469 1 0.57765 1 0.53129 1 0.86918 1 0.2395 1 0.80909 1 0.12291 1 0.10903 1 0.30943 1 0.30924 1 0.72892 1 0.27275 1 0.63455 1 9p gain 19 (6%) 306 0.21401 1 0.71987 1 0.27852 1 NA NA 0.0012662 1 0.5323 1 0.70424 1 1 1 0.79464 1 1 1 0.92763 1 0.20525 1 0.87895 1 0.88244 1 9q gain 27 (8%) 298 0.17107 1 0.50401 1 1 1 0.53685 1 0.39236 1 0.32843 1 0.80559 1 0.21375 1 0.71529 1 0.60897 1 0.67984 1 0.89864 1 0.53682 1 0.73955 1 10p gain 15 (5%) 310 0.8249 1 0.99628 1 0.76794 1 0.93626 1 0.97358 1 0.29871 1 0.077132 1 0.13497 1 0.013217 1 0.41031 1 0.24815 1 0.88081 1 0.48785 1 0.37245 1 10q gain 6 (2%) 319 0.35449 1 0.73352 1 1 1 NA NA 0.99559 1 0.48074 1 0.45189 1 1 1 0.52026 1 0.18798 1 0.58154 1 0.45897 1 0.11153 1 0.77094 1 11p gain 18 (6%) 307 0.54609 1 0.55442 1 0.57824 1 1.9981e-06 0.00217 0.96251 1 0.0089406 1 0.39681 1 1 1 0.5204 1 0.47107 1 0.1481 1 0.8725 1 0.84367 1 0.54105 1 11q gain 21 (6%) 304 0.29341 1 0.73544 1 0.30358 1 0.52069 1 0.92126 1 0.045722 1 0.18565 1 0.77317 1 0.084379 1 0.52609 1 0.56156 1 0.8222 1 0.70139 1 0.98652 1 12p gain 90 (28%) 235 0.86765 1 0.93873 1 0.0043735 1 0.077351 1 0.88447 1 0.14907 1 0.80415 1 0.86176 1 0.90261 1 0.50467 1 0.96494 1 0.34279 1 0.40382 1 0.40419 1 12q gain 40 (12%) 285 0.72205 1 0.8191 1 0.05193 1 0.37758 1 0.97836 1 0.28312 1 0.10811 1 0.3531 1 0.23413 1 0.63175 1 0.6303 1 0.30234 1 0.20594 1 0.83895 1 13q gain 8 (2%) 317 0.27526 1 0.93745 1 0.68489 1 NA NA 0.99223 1 0.26335 1 1 1 0.25167 1 0.6705 1 1 1 0.56564 1 0.84301 1 0.12347 1 0.68135 1 14q gain 31 (10%) 294 0.068263 1 0.0833 1 0.51816 1 0.85798 1 0.97358 1 0.27266 1 0.62948 1 0.55198 1 0.90018 1 1 1 0.60846 1 0.25147 1 0.3581 1 0.65739 1 15q gain 29 (9%) 296 0.68746 1 0.99328 1 1 1 0.38928 1 0.45293 1 0.7327 1 0.3348 1 1 1 0.64391 1 1 1 0.51118 1 0.4412 1 0.012566 1 0.46272 1 16p gain 15 (5%) 310 0.7785 1 0.3108 1 0.37074 1 0.068098 1 0.79923 1 0.015622 1 0.67812 1 1 1 0.61022 1 1 1 0.80567 1 0.68773 1 0.43685 1 0.12113 1 16q gain 19 (6%) 306 0.85637 1 0.10861 1 0.17486 1 0.36575 1 0.95844 1 0.0040728 1 0.22815 1 0.29211 1 0.15327 1 1 1 0.94034 1 0.17387 1 0.92205 1 0.01249 1 17p gain 9 (3%) 316 0.34613 1 0.83903 1 0.11844 1 NA NA 3.7919e-07 0.000413 0.55011 1 0.41862 1 0.29362 1 0.095 1 1 1 0.9482 1 0.58103 1 0.14258 1 0.02319 1 17q gain 35 (11%) 290 0.70397 1 0.3826 1 0.042069 1 0.1205 1 0.60942 1 0.47715 1 0.020607 1 0.168 1 0.050512 1 0.33588 1 0.79118 1 0.4013 1 0.56695 1 0.055767 1 18p gain 51 (16%) 274 0.18319 1 0.13027 1 0.22006 1 0.32139 1 0.83713 1 0.12345 1 0.019572 1 0.097046 1 0.17913 1 0.68531 1 0.34396 1 0.49823 1 0.19121 1 0.63613 1 18q gain 38 (12%) 287 0.42001 1 0.493 1 0.69221 1 0.56696 1 0.67169 1 0.17589 1 0.11934 1 0.32346 1 0.83006 1 0.6244 1 0.079331 1 0.69149 1 0.54356 1 0.24773 1 19p gain 33 (10%) 292 0.43778 1 0.22697 1 0.67541 1 1.7696e-06 0.00192 5.6313e-06 0.00609 0.63371 1 0.37765 1 0.56639 1 0.63024 1 0.30928 1 0.59171 1 0.95401 1 0.65633 1 0.83014 1 19q gain 46 (14%) 279 0.66717 1 0.82024 1 1 1 0.13881 1 0.00056485 0.608 0.85435 1 0.11229 1 0.07475 1 0.05744 1 0.65887 1 0.87866 1 0.74163 1 0.86315 1 0.16175 1 20p gain 91 (28%) 234 0.76505 1 0.063715 1 0.02305 1 0.27865 1 0.17288 1 0.94187 1 0.62227 1 0.040791 1 0.1525 1 0.18993 1 0.74053 1 0.68349 1 0.77885 1 0.19833 1 20q gain 81 (25%) 244 0.64238 1 0.31868 1 0.18775 1 0.76985 1 0.017531 1 0.9911 1 0.52627 1 0.082431 1 0.13991 1 0.14994 1 0.46956 1 0.4298 1 0.82457 1 0.65793 1 21q gain 18 (6%) 307 0.26823 1 0.68199 1 1 1 0.94869 1 5.9588e-05 0.0644 0.23861 1 0.24863 1 0.72039 1 0.19145 1 0.47107 1 0.86516 1 0.51501 1 0.48784 1 0.63058 1 22q gain 77 (24%) 248 0.082608 1 0.36096 1 0.45838 1 0.7815 1 0.90583 1 0.20393 1 0.53007 1 1 1 0.11297 1 0.72613 1 0.93833 1 0.086884 1 0.32832 1 0.60437 1 Xq gain 9 (3%) 316 0.88142 1 0.28663 1 1 1 0.89065 1 0.99021 1 0.48348 1 0.8905 1 0.64229 1 0.6945 1 1 1 0.56306 1 0.75301 1 1 1 0.96441 1 1p loss 48 (15%) 277 0.56611 1 0.76407 1 0.0020956 1 0.44976 1 0.11916 1 0.53666 1 0.49552 1 0.12104 1 0.25787 1 0.21172 1 0.5193 1 0.76028 1 0.51108 1 0.57226 1 1q loss 8 (2%) 317 0.96092 1 0.052562 1 0.68489 1 NA NA 0.99223 1 0.45232 1 0.57068 1 0.59839 1 0.30885 1 0.2431 1 0.18915 1 0.54471 1 0.2702 1 0.25173 1 2q loss 9 (3%) 316 0.051391 1 0.11016 1 1 1 NA NA 0.99021 1 0.66262 1 0.8905 1 1 1 0.76578 1 1 1 0.17613 1 0.55645 1 0.11135 1 0.73132 1 3p loss 139 (43%) 186 0.61777 1 0.3652 1 0.70191 1 0.095008 1 0.40587 1 0.95012 1 0.86615 1 0.74559 1 0.90403 1 0.5387 1 0.56662 1 0.25253 1 0.57395 1 0.41174 1 3q loss 25 (8%) 300 0.10051 1 0.24024 1 0.63658 1 0.65012 1 0.012551 1 0.28754 1 0.061888 1 0.20483 1 0.068673 1 1 1 0.087125 1 0.17817 1 0.89246 1 0.053625 1 4p loss 137 (42%) 188 0.11334 1 0.79408 1 1 1 0.27093 1 0.40554 1 0.3615 1 0.30972 1 0.26427 1 0.052586 1 1 1 0.51173 1 0.96193 1 0.92574 1 0.20213 1 4q loss 118 (36%) 207 0.079679 1 0.56641 1 0.14555 1 0.13836 1 0.2352 1 0.48328 1 0.84553 1 0.33992 1 0.20944 1 0.5362 1 0.5137 1 0.60053 1 0.68505 1 0.52218 1 5p loss 23 (7%) 302 0.051364 1 0.34812 1 0.46096 1 0.49071 1 0.0078923 1 0.40516 1 0.31318 1 0.35809 1 0.85766 1 0.17842 1 0.85072 1 0.4815 1 0.67454 1 0.28344 1 5q loss 120 (37%) 205 0.15436 1 0.74935 1 0.51249 1 0.68351 1 0.23547 1 0.026292 1 0.26788 1 0.17332 1 0.014076 1 0.54241 1 0.47166 1 0.8421 1 0.30968 1 0.025102 1 6p loss 34 (10%) 291 0.73072 1 0.45705 1 0.14859 1 0.81777 1 0.022679 1 0.076646 1 0.17579 1 0.7123 1 0.078109 1 0.6132 1 0.70015 1 0.89621 1 0.6812 1 0.97595 1 6q loss 37 (11%) 288 0.79416 1 0.62613 1 0.84217 1 0.78876 1 0.0372 1 0.067535 1 0.19551 1 0.85728 1 0.17123 1 0.62113 1 0.26385 1 0.65344 1 0.51385 1 0.14381 1 7p loss 20 (6%) 305 0.73855 1 0.46724 1 0.79159 1 0.79553 1 0.95419 1 0.29422 1 0.21383 1 1 1 0.54684 1 0.50835 1 0.10311 1 0.019144 1 0.42131 1 0.39421 1 7q loss 10 (3%) 315 0.48542 1 0.81816 1 0.46191 1 NA NA 0.98797 1 0.12365 1 0.42309 1 1 1 0.92335 1 0.2948 1 0.16455 1 0.89299 1 0.38647 1 0.59585 1 8p loss 96 (30%) 229 0.58073 1 0.18115 1 0.57728 1 0.29751 1 0.86566 1 0.21754 1 0.65643 1 0.50308 1 0.5772 1 0.18472 1 0.046404 1 0.08317 1 0.065125 1 0.4593 1 8q loss 11 (3%) 314 0.48168 1 0.6681 1 0.30109 1 0.4632 1 0.61072 1 0.64079 1 1 1 0.65988 1 0.9277 1 1 1 0.30495 1 8.7243e-07 0.000948 0.32826 1 0.17061 1 9p loss 134 (41%) 191 0.804 1 0.35286 1 0.43979 1 0.30009 1 0.40391 1 0.79816 1 0.48246 1 0.65367 1 0.68536 1 0.76567 1 0.13654 1 0.86919 1 0.7356 1 0.3636 1 9q loss 84 (26%) 241 0.87988 1 0.0038675 1 0.77174 1 0.76794 1 0.15997 1 0.292 1 0.71254 1 0.1726 1 0.87891 1 1 1 0.75317 1 0.97663 1 0.60891 1 0.091134 1 10p loss 71 (22%) 254 0.43064 1 0.59207 1 0.22177 1 0.96319 1 0.36265 1 0.79653 1 0.32687 1 0.44108 1 0.32705 1 0.13031 1 0.92865 1 0.048402 1 0.42115 1 0.55641 1 10q loss 70 (22%) 255 0.37805 1 0.99838 1 0.8775 1 0.83239 1 0.35333 1 0.97999 1 0.87659 1 0.21075 1 0.33889 1 0.12959 1 0.18558 1 0.080974 1 0.73361 1 0.079694 1 11p loss 50 (15%) 275 0.34871 1 0.76941 1 0.60026 1 0.71223 1 0.20865 1 0.58086 1 0.3946 1 0.31789 1 0.88297 1 0.38495 1 0.4528 1 0.75881 1 0.44388 1 0.72331 1 11q loss 32 (10%) 293 0.66319 1 0.033787 1 0.40214 1 0.96339 1 0.88999 1 0.69293 1 0.10631 1 1 1 0.50905 1 0.29596 1 0.8636 1 0.6387 1 0.40619 1 0.7918 1 12p loss 5 (2%) 320 0.5049 1 0.0021638 1 0.60509 1 NA NA 3.6298e-13 3.95e-10 0.18507 1 0.78853 1 0.43294 1 0.31617 1 1 1 0.22951 1 0.91634 1 0.37826 1 0.2729 1 12q loss 4 (1%) 321 0.8638 1 0.18489 1 0.27022 1 NA NA 1.3235e-16 1.44e-13 0.18507 1 0.54253 1 0.36433 1 0.34958 1 1 1 NA NA NA NA 0.19538 1 0.32651 1 13q loss 123 (38%) 202 0.01329 1 0.5597 1 0.51404 1 0.074447 1 0.33608 1 0.9529 1 0.14004 1 0.41958 1 0.02013 1 0.75331 1 0.72017 1 0.046033 1 0.2296 1 0.014938 1 14q loss 60 (18%) 265 0.19503 1 0.21097 1 0.071892 1 0.22732 1 0.16672 1 0.019306 1 0.1586 1 0.43348 1 0.43434 1 0.43265 1 0.75832 1 0.89874 1 0.42701 1 0.19035 1 15q loss 38 (12%) 287 0.69962 1 0.3133 1 0.046937 1 0.7341 1 0.067795 1 0.039113 1 0.083407 1 0.46163 1 0.02002 1 1 1 0.40582 1 0.27417 1 0.18188 1 0.92102 1 16p loss 49 (15%) 276 0.18803 1 0.75422 1 0.86 1 0.4533 1 0.76667 1 0.73756 1 0.61094 1 0.79291 1 0.95614 1 1 1 0.31258 1 0.63858 1 0.90073 1 0.68431 1 16q loss 60 (18%) 265 0.1332 1 0.16365 1 0.14074 1 1.7696e-06 0.00192 0.67422 1 0.79999 1 0.4344 1 0.13793 1 0.79193 1 0.43265 1 0.075458 1 0.73946 1 0.29919 1 0.58968 1 17p loss 116 (36%) 209 0.20149 1 0.83484 1 0.42587 1 0.040135 1 0.54603 1 0.37633 1 0.19153 1 0.33892 1 0.93431 1 0.53065 1 0.38715 1 0.031402 1 0.28662 1 0.65407 1 17q loss 20 (6%) 305 0.79839 1 0.79292 1 0.05999 1 0.4533 1 0.95419 1 0.59869 1 0.78601 1 0.12951 1 0.28554 1 0.50835 1 0.96741 1 0.35673 1 0.4087 1 0.18454 1 18p loss 36 (11%) 289 0.43416 1 0.87863 1 0.69094 1 0.99688 1 0.86388 1 0.95679 1 0.30196 1 0.20619 1 0.38891 1 0.61816 1 0.075638 1 0.86229 1 0.76615 1 0.42639 1 18q loss 66 (20%) 259 0.49914 1 0.11649 1 0.26921 1 0.76794 1 0.33192 1 0.44553 1 0.92475 1 0.24469 1 0.87781 1 1 1 0.13392 1 0.23123 1 0.32293 1 0.29352 1 19p loss 52 (16%) 273 0.071551 1 0.66899 1 0.86243 1 0.11795 1 0.13733 1 0.59574 1 0.098151 1 0.152 1 0.12477 1 0.018787 1 0.96074 1 0.97513 1 0.1164 1 0.11078 1 19q loss 36 (11%) 289 0.57155 1 0.19745 1 0.83945 1 0.25981 1 0.0018669 1 0.56603 1 0.24846 1 0.59507 1 0.88237 1 0.11049 1 0.1564 1 0.79418 1 0.26137 1 0.034969 1 20p loss 16 (5%) 309 0.060001 1 0.86781 1 1 1 NA NA 0.97008 1 0.38678 1 0.52409 1 0.72039 1 0.066268 1 1 1 0.90946 1 0.0366 1 0.79526 1 0.70501 1 20q loss 17 (5%) 308 0.37598 1 0.90724 1 0.57516 1 NA NA 0.9664 1 0.94495 1 0.40629 1 0.73527 1 0.83891 1 1 1 0.11962 1 0.90612 1 0.89003 1 0.17754 1 21q loss 99 (30%) 226 0.45378 1 0.31419 1 0.012506 1 0.56362 1 0.52966 1 0.50355 1 0.71883 1 0.2902 1 0.10045 1 0.74109 1 0.25257 1 0.10154 1 0.94463 1 0.37408 1 22q loss 33 (10%) 292 0.64801 1 0.12607 1 0.060463 1 0.32705 1 0.0011915 1 0.23478 1 0.0004219 0.455 0.28196 1 0.0029199 1 1 1 0.71452 1 0.067564 1 0.40233 1 0.083572 1 Xq loss 13 (4%) 312 0.8842 1 0.28373 1 0.32904 1 0.94869 1 6.6256e-05 0.0715 0.72876 1 0.15019 1 1 1 0.44914 1 1 1 0.68143 1 0.84149 1 1 1 0.78798 1