Clinical Features Time to Death AGE GENDER HISTOLOGICAL.TYPE PATHOLOGY.T PATHOLOGY.N PATHOLOGICSPREAD(M) TUMOR.STAGE RADIATIONS.RADIATION.REGIMENINDICATION nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Amp Peak 1(1q21.3) 48 (30%) 114 0.53763 1 0.95137 1 0.86308 1 1 1 0.11685 1 0.4429 1 0.10201 1 0.84323 1 0.0639 1 Amp Peak 2(1q32.2) 48 (30%) 114 0.049247 1 0.64541 1 1 1 1 1 0.029124 1 0.25149 1 0.36038 1 0.61383 1 0.3625 1 Amp Peak 3(5q22.3) 19 (12%) 143 0.52851 1 0.38341 1 0.80979 1 0.36988 1 0.88134 1 0.75323 1 0.743 1 0.81182 1 1 1 Amp Peak 4(6p21.1) 52 (32%) 110 0.17813 1 0.52847 1 0.40025 1 0.062648 1 0.44107 1 0.0079925 1 0.0068432 1 0.029521 1 0.084393 1 Amp Peak 5(8p11.23) 52 (32%) 110 0.085242 1 0.26445 1 0.063516 1 0.22174 1 0.21919 1 0.4487 1 0.2989 1 0.22279 1 1 1 Amp Peak 6(8p11.21) 69 (43%) 93 0.47794 1 0.54079 1 0.63656 1 0.15414 1 0.41111 1 0.82842 1 0.19471 1 0.073144 1 0.24117 1 Amp Peak 7(8q24.21) 107 (66%) 55 0.69343 1 0.22849 1 0.86792 1 0.032634 1 0.49925 1 0.70179 1 0.53772 1 0.29005 1 0.66477 1 Amp Peak 8(10q22.2) 11 (7%) 151 0.30639 1 0.68634 1 0.55096 1 0.59242 1 0.93512 1 0.91433 1 0.74317 1 0.96943 1 0.34871 1 Amp Peak 9(11p15.5) 43 (27%) 119 0.60654 1 0.96912 1 1 1 0.18754 1 0.916 1 0.191 1 0.85198 1 0.26872 1 0.65646 1 Amp Peak 10(11q13.3) 26 (16%) 136 0.45575 1 0.057688 1 1 1 0.69657 1 0.49883 1 0.37658 1 0.28757 1 0.10328 1 0.59063 1 Amp Peak 11(12p13.33) 41 (25%) 121 0.98382 1 0.24645 1 0.58873 1 0.30777 1 0.42541 1 0.54786 1 0.10174 1 0.65301 1 0.17061 1 Amp Peak 12(12p12.1) 40 (25%) 122 0.70177 1 0.33391 1 0.71597 1 0.19084 1 0.37552 1 0.54218 1 0.087871 1 0.4485 1 0.16079 1 Amp Peak 13(13q12.13) 121 (75%) 41 0.041729 1 0.11278 1 0.71783 1 0.0038732 1 0.06662 1 0.017821 1 0.23928 1 0.26872 1 0.17061 1 Amp Peak 14(13q12.2) 120 (74%) 42 0.051957 1 0.051397 1 0.36925 1 0.0046658 1 0.062897 1 0.027632 1 0.30324 1 0.30737 1 0.18069 1 Amp Peak 15(13q22.1) 117 (72%) 45 0.20206 1 0.33704 1 0.48154 1 0.0013229 0.732 0.20095 1 0.13431 1 0.27898 1 0.44067 1 0.67018 1 Amp Peak 16(15q26.1) 15 (9%) 147 0.85361 1 0.94409 1 0.10618 1 0.36218 1 0.22129 1 0.42292 1 0.44619 1 0.56813 1 0.096746 1 Amp Peak 17(16p11.2) 45 (28%) 117 0.18315 1 0.32271 1 0.8622 1 0.020477 1 0.62369 1 0.14641 1 0.079585 1 0.36702 1 0.67018 1 Amp Peak 18(17q12) 43 (27%) 119 0.65269 1 0.67556 1 0.2149 1 0.51715 1 0.7454 1 0.35702 1 0.34784 1 0.43671 1 0.3428 1 Amp Peak 19(17q24.1) 37 (23%) 125 0.65945 1 0.42342 1 1 1 0.040059 1 0.25502 1 0.2653 1 0.18455 1 0.19613 1 0.33806 1 Amp Peak 20(19p13.2) 32 (20%) 130 0.024451 1 0.45063 1 0.69262 1 0.07167 1 0.24239 1 0.54329 1 0.57765 1 0.72297 1 0.59931 1 Amp Peak 21(20q11.21) 143 (88%) 19 0.20868 1 0.098979 1 1 1 0.0007377 0.409 0.55047 1 0.099109 1 0.54654 1 0.095093 1 0.53286 1 Amp Peak 22(20q11.23) 144 (89%) 18 0.21077 1 0.17924 1 1 1 0.00049829 0.277 0.60282 1 0.030493 1 0.43313 1 0.081492 1 0.51255 1 Amp Peak 23(20q13.31) 145 (90%) 17 0.21694 1 0.23948 1 0.79955 1 0.00049829 0.277 0.61413 1 0.049817 1 0.49311 1 0.13328 1 0.4915 1 Amp Peak 24(Xp22.2) 33 (20%) 129 0.94495 1 0.42702 1 0.077108 1 0.30265 1 0.72167 1 0.67701 1 0.46465 1 0.60216 1 0.3484 1 Amp Peak 25(Xq27.3) 38 (23%) 124 0.45853 1 0.22534 1 0.35604 1 0.29989 1 0.34307 1 0.74872 1 0.688 1 0.65192 1 0.33725 1 Del Peak 1(1p36.11) 71 (44%) 91 0.93895 1 0.61696 1 0.75077 1 0.55998 1 0.098333 1 0.22299 1 0.41177 1 0.63915 1 1 1 Del Peak 2(1p33) 49 (30%) 113 0.52165 1 0.65245 1 1 1 0.10994 1 0.53709 1 0.25273 1 0.77822 1 0.64939 1 0.36791 1 Del Peak 3(1p13.2) 51 (31%) 111 0.9441 1 0.64584 1 0.73506 1 0.34669 1 0.14399 1 0.8072 1 0.51795 1 0.1769 1 0.38004 1 Del Peak 4(2p12) 17 (10%) 145 0.49763 1 0.17498 1 0.79955 1 1 1 0.36422 1 0.6604 1 0.28521 1 0.25079 1 0.4915 1 Del Peak 5(3p14.2) 29 (18%) 133 0.052024 1 0.81137 1 0.012992 1 0.45585 1 0.18635 1 0.96225 1 0.28483 1 0.03898 1 0.29234 1 Del Peak 6(3q26.31) 17 (10%) 145 8.1632e-05 0.0455 0.70503 1 0.0036005 1 0.030292 1 0.21554 1 0.55426 1 0.20027 1 0.0025557 1 0.12103 1 Del Peak 7(4p13) 58 (36%) 104 0.21501 1 0.87683 1 0.099573 1 0.38022 1 0.76909 1 0.3258 1 0.98012 1 0.68469 1 0.0017706 0.977 Del Peak 8(4q22.1) 72 (44%) 90 0.1067 1 0.37838 1 0.15322 1 0.39275 1 0.2884 1 0.72244 1 0.85806 1 0.64194 1 0.089154 1 Del Peak 9(4q35.1) 72 (44%) 90 0.29406 1 0.64462 1 0.42788 1 0.15023 1 0.45466 1 0.57304 1 0.97968 1 0.80698 1 0.089154 1 Del Peak 10(5q11.2) 49 (30%) 113 0.70837 1 0.83597 1 0.23308 1 0.34669 1 0.96574 1 0.8744 1 0.33891 1 0.25326 1 0.010038 1 Del Peak 11(5q22.2) 55 (34%) 107 0.58026 1 0.56014 1 0.40547 1 0.22154 1 0.50996 1 0.43243 1 0.92162 1 0.57823 1 0.017551 1 Del Peak 12(6p25.3) 24 (15%) 138 0.40926 1 0.39101 1 0.82484 1 0.38612 1 0.21582 1 0.38821 1 0.67045 1 0.075205 1 0.21722 1 Del Peak 13(6q26) 30 (19%) 132 0.39963 1 0.85191 1 0.15769 1 0.013793 1 0.39494 1 0.076983 1 0.67723 1 0.52748 1 0.30767 1 Del Peak 14(7q31.1) 4 (2%) 158 NA NA 0.17357 1 1 1 0.29644 1 1 1 0.52827 1 1 1 0.91894 1 1 1 Del Peak 15(8p23.2) 100 (62%) 62 0.71028 1 0.49421 1 0.87184 1 0.56423 1 0.20484 1 0.55676 1 0.82706 1 0.81776 1 0.083141 1 Del Peak 16(8p11.21) 24 (15%) 138 0.84671 1 0.18419 1 0.50625 1 1 1 0.75468 1 0.83674 1 0.082902 1 0.33865 1 0.21722 1 Del Peak 17(10q21.1) 37 (23%) 125 0.49757 1 0.2611 1 0.57382 1 0.17905 1 0.85833 1 0.57921 1 0.10178 1 0.19389 1 0.024875 1 Del Peak 18(10q25.2) 47 (29%) 115 0.42204 1 0.36901 1 0.86383 1 0.053486 1 0.14006 1 0.89508 1 0.59905 1 0.30253 1 0.0081863 1 Del Peak 19(11q22.3) 37 (23%) 125 0.29813 1 0.4534 1 0.71026 1 0.03219 1 0.64657 1 0.96738 1 0.059735 1 0.27269 1 0.13288 1 Del Peak 20(12p13.1) 33 (20%) 129 0.086254 1 0.89446 1 0.84504 1 0.4648 1 0.93579 1 0.14198 1 0.28047 1 0.76336 1 1 1 Del Peak 21(12q21.33) 28 (17%) 134 0.62557 1 0.29208 1 1 1 0.46895 1 0.73529 1 0.88827 1 0.67749 1 0.25432 1 0.27709 1 Del Peak 22(14q11.2) 67 (41%) 95 0.23018 1 0.42678 1 0.42723 1 0.074562 1 0.61499 1 0.27783 1 0.71353 1 0.33206 1 0.23222 1 Del Peak 23(14q31.1) 69 (43%) 93 0.60728 1 0.83991 1 0.2699 1 0.0078662 1 0.16578 1 0.055731 1 0.6217 1 0.26889 1 1 1 Del Peak 24(15q22.33) 75 (46%) 87 0.5582 1 0.86006 1 0.3441 1 1 1 0.010777 1 0.26809 1 0.76673 1 0.073064 1 0.096583 1 Del Peak 25(16p13.3) 13 (8%) 149 0.0033751 1 0.43328 1 1 1 0.26254 1 0.78799 1 0.18096 1 0.79668 1 0.13384 1 1 1 Del Peak 26(16q23.1) 23 (14%) 139 0.92529 1 0.58452 1 0.82563 1 1 1 0.60586 1 0.014554 1 0.84071 1 0.33775 1 1 1 Del Peak 27(17p12) 110 (68%) 52 0.39954 1 0.09432 1 0.86649 1 0.1216 1 0.014549 1 0.92374 1 0.91846 1 0.20625 1 1 1 Del Peak 28(17p11.2) 102 (63%) 60 0.77529 1 0.20052 1 0.51401 1 0.078336 1 0.084484 1 0.70518 1 0.37214 1 0.61724 1 0.67097 1 Del Peak 29(17q25.3) 24 (15%) 138 0.10289 1 0.69641 1 0.11892 1 1 1 0.3663 1 0.87404 1 0.13007 1 0.36089 1 0.21722 1 Del Peak 30(18q21.2) 143 (88%) 19 0.65334 1 0.44326 1 1 1 1 1 0.0058948 1 0.060677 1 0.20836 1 0.019828 1 1 1 Del Peak 31(18q22.1) 138 (85%) 24 0.65334 1 0.22686 1 0.82484 1 0.39718 1 0.04872 1 0.35344 1 0.56679 1 0.12251 1 0.59307 1 Del Peak 32(19p13.3) 38 (23%) 124 0.81617 1 0.79461 1 1 1 0.73377 1 0.29506 1 0.56659 1 0.24916 1 0.75068 1 1 1 Del Peak 33(20p12.1) 60 (37%) 102 0.13091 1 0.23048 1 0.25694 1 1 1 0.83999 1 0.88547 1 0.46803 1 0.85318 1 0.085462 1 Del Peak 34(20p12.1) 60 (37%) 102 0.13091 1 0.23048 1 0.25694 1 1 1 0.83999 1 0.88547 1 0.46803 1 0.85318 1 0.085462 1 Del Peak 35(21q11.2) 70 (43%) 92 0.99566 1 0.45392 1 0.63311 1 0.24007 1 0.13901 1 0.33193 1 0.7776 1 0.60214 1 1 1 Del Peak 36(22q13.31) 66 (41%) 96 0.057165 1 0.25461 1 0.33875 1 0.56325 1 0.27769 1 0.0084884 1 0.20924 1 0.33099 1 0.6883 1 Del Peak 37(Xp22.33) 33 (20%) 129 0.62644 1 0.6809 1 0.84504 1 0.71608 1 0.72167 1 0.86949 1 0.5962 1 0.90202 1 1 1