Clinical Features Time to Death AGE GENDER HISTOLOGICAL.TYPE PATHOLOGY.T PATHOLOGY.N PATHOLOGICSPREAD(M) TUMOR.STAGE RADIATIONS.RADIATION.REGIMENINDICATION nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Amp Peak 1(1p36.22) 22 (14%) 139 0.14933 1 0.65829 1 0.033474 1 0.087353 1 0.16414 1 0.72531 1 0.22043 1 0.24385 1 0.52512 1 Amp Peak 2(1q21.3) 50 (31%) 111 0.71265 1 0.29044 1 1 1 0.1324 1 0.27631 1 0.52696 1 0.56576 1 0.72839 1 0.032695 1 Amp Peak 3(1q42.3) 47 (29%) 114 0.57151 1 0.96377 1 0.37729 1 0.029635 1 0.77154 1 0.55329 1 0.46507 1 0.43343 1 0.14918 1 Amp Peak 4(3q26.31) 48 (30%) 113 0.98014 1 0.51814 1 0.034596 1 0.062225 1 0.38872 1 0.51045 1 0.44193 1 0.55633 1 1 1 Amp Peak 5(5p13.1) 44 (27%) 117 0.89864 1 0.34548 1 0.047386 1 0.75171 1 0.39202 1 0.36206 1 0.69554 1 0.051831 1 0.12619 1 Amp Peak 6(6p21.1) 45 (28%) 116 0.013449 1 0.38404 1 0.15487 1 0.60415 1 0.046155 1 0.43837 1 0.051748 1 0.14503 1 0.13364 1 Amp Peak 7(6q12) 33 (20%) 128 0.37232 1 0.68811 1 1 1 0.77325 1 0.47764 1 0.92832 1 0.85899 1 0.86368 1 0.27173 1 Amp Peak 8(7p11.2) 69 (43%) 92 0.8814 1 0.017031 1 0.14429 1 0.41692 1 0.060932 1 0.93751 1 0.18023 1 0.19063 1 0.393 1 Amp Peak 9(7q21.2) 71 (44%) 90 0.72335 1 0.055117 1 0.07651 1 0.7292 1 0.073091 1 0.36 1 0.062235 1 0.20274 1 1 1 Amp Peak 10(8p23.1) 59 (37%) 102 0.54105 1 0.34638 1 0.18445 1 0.8204 1 0.41544 1 0.8885 1 0.59033 1 0.52433 1 0.060742 1 Amp Peak 11(8q24.21) 102 (63%) 59 0.67608 1 0.027387 1 0.50721 1 0.2955 1 0.0021251 1 0.43081 1 0.65719 1 0.49625 1 1 1 Amp Peak 12(9p24.1) 22 (14%) 139 0.87813 1 0.78508 1 0.81628 1 0.84103 1 0.15787 1 0.32648 1 1 1 0.044348 1 0.13817 1 Amp Peak 13(9q34.3) 39 (24%) 122 0.33523 1 0.029239 1 1 1 0.15954 1 0.29777 1 0.56682 1 0.71699 1 0.17974 1 0.092202 1 Amp Peak 14(10q26.13) 33 (20%) 128 0.17626 1 0.50808 1 0.55331 1 0.78564 1 0.63709 1 0.98129 1 0.59498 1 0.66034 1 0.27173 1 Amp Peak 15(11p13) 25 (16%) 136 0.99107 1 0.82114 1 0.38491 1 0.60687 1 0.67512 1 0.037463 1 0.83785 1 0.27277 1 0.57489 1 Amp Peak 16(11q13.3) 28 (17%) 133 0.12391 1 0.52797 1 0.089822 1 0.49022 1 0.57243 1 0.4956 1 0.84672 1 0.35892 1 1 1 Amp Peak 17(12p12.1) 37 (23%) 124 0.67641 1 0.89381 1 0.56754 1 0.26582 1 0.040248 1 0.0084308 1 0.37962 1 0.0098849 1 0.59004 1 Amp Peak 18(12q15) 35 (22%) 126 0.45875 1 0.73516 1 0.4422 1 0.48805 1 0.73435 1 0.14221 1 0.33461 1 0.39188 1 0.29779 1 Amp Peak 19(13q12.3) 58 (36%) 103 0.17654 1 0.59447 1 0.094009 1 0.51134 1 0.38714 1 0.079391 1 0.52825 1 0.19802 1 1 1 Amp Peak 20(13q22.1) 65 (40%) 96 0.67352 1 0.70467 1 0.021964 1 0.61134 1 0.68083 1 0.77296 1 0.22939 1 0.070054 1 1 1 Amp Peak 21(15q26.1) 40 (25%) 121 0.71596 1 0.18466 1 0.26934 1 0.32489 1 0.2027 1 0.366 1 0.59651 1 0.61744 1 0.59865 1 Amp Peak 22(17q12) 43 (27%) 118 0.61737 1 0.088449 1 0.14652 1 0.16046 1 0.126 1 0.3195 1 0.004268 1 0.38971 1 0.61027 1 Amp Peak 23(18q11.2) 44 (27%) 117 0.078832 1 0.42492 1 0.20874 1 0.148 1 0.26078 1 0.18403 1 0.57315 1 0.47068 1 0.12619 1 Amp Peak 24(19q12) 44 (27%) 117 0.22301 1 0.26242 1 0.59086 1 0.042866 1 0.23181 1 0.14724 1 0.57315 1 0.5641 1 0.020042 1 Amp Peak 25(20q13.2) 99 (61%) 62 0.16838 1 0.33659 1 0.0048137 1 0.24886 1 0.005764 1 0.49618 1 0.69927 1 0.64281 1 1 1 Amp Peak 26(Xq27.3) 32 (20%) 129 0.51462 1 0.20127 1 0.841 1 0.65074 1 0.97196 1 0.69887 1 0.80014 1 0.24413 1 1 1 Del Peak 1(1p36.11) 40 (25%) 121 0.84505 1 0.94184 1 0.46215 1 0.35032 1 0.18126 1 0.96795 1 0.88055 1 0.73605 1 0.59865 1 Del Peak 2(1p31.1) 26 (16%) 135 0.6397 1 0.99621 1 0.66317 1 0.08369 1 0.9496 1 0.96202 1 0.37137 1 0.58555 1 0.59052 1 Del Peak 3(1q44) 12 (7%) 149 0.015245 1 0.061397 1 0.76337 1 0.78581 1 0.19994 1 0.49694 1 0.58699 1 0.79566 1 1 1 Del Peak 4(2q32.1) 19 (12%) 142 0.32279 1 0.62314 1 0.80773 1 0.048273 1 0.38853 1 0.31065 1 0.25894 1 0.57725 1 0.47079 1 Del Peak 5(2q33.3) 16 (10%) 145 0.1852 1 0.41153 1 0.4315 1 0.024382 1 0.1915 1 0.14981 1 0.088935 1 0.79971 1 0.077753 1 Del Peak 6(2q37.2) 22 (14%) 139 0.57062 1 0.13568 1 0.35541 1 0.005288 1 0.61511 1 0.27952 1 0.22043 1 0.38819 1 0.52512 1 Del Peak 7(3p26.1) 38 (24%) 123 0.57518 1 0.50573 1 0.57317 1 0.85564 1 0.42776 1 0.5146 1 0.81799 1 0.9518 1 1 1 Del Peak 8(3p14.2) 51 (32%) 110 0.93364 1 0.63254 1 0.30037 1 0.11296 1 0.15815 1 0.79026 1 0.79698 1 0.4534 1 0.65225 1 Del Peak 9(3q26.31) 13 (8%) 148 0.68268 1 0.59756 1 1 1 0.77955 1 0.4374 1 0.20739 1 0.1446 1 0.83765 1 0.34723 1 Del Peak 10(4p16.3) 49 (30%) 112 0.22778 1 0.67044 1 0.38466 1 0.32412 1 0.16127 1 0.89648 1 0.090669 1 0.95314 1 0.64056 1 Del Peak 11(4q22.1) 60 (37%) 101 0.25798 1 0.35328 1 0.74114 1 0.12383 1 0.053451 1 0.21376 1 0.85851 1 0.45371 1 0.06462 1 Del Peak 12(4q35.1) 59 (37%) 102 0.14583 1 0.27538 1 0.40577 1 0.066195 1 0.14499 1 0.3877 1 0.69561 1 0.11002 1 0.35689 1 Del Peak 13(5q11.2) 45 (28%) 116 0.36139 1 0.17918 1 0.723 1 0.0043923 1 0.0031048 1 0.68883 1 0.17568 1 0.52935 1 0.61944 1 Del Peak 14(6p25.3) 34 (21%) 127 0.16129 1 0.60754 1 0.23878 1 0.0052003 1 0.076711 1 0.34635 1 0.2811 1 0.95753 1 1 1 Del Peak 15(6q26) 35 (22%) 126 0.34737 1 0.50005 1 1 1 0.5437 1 0.72658 1 0.4676 1 1 1 0.60924 1 0.29779 1 Del Peak 16(6q27) 34 (21%) 127 0.60239 1 0.32787 1 0.8455 1 0.26525 1 0.77798 1 0.53116 1 0.86261 1 0.7982 1 0.28472 1 Del Peak 17(7q31.1) 19 (12%) 142 0.080252 1 0.65691 1 0.21987 1 0.20071 1 0.78028 1 0.0013427 0.867 0.56073 1 0.48837 1 1 1 Del Peak 18(7q36.3) 29 (18%) 132 0.2568 1 0.39323 1 0.30052 1 0.16045 1 0.18362 1 0.0048619 1 0.92046 1 0.021764 1 1 1 Del Peak 19(8p23.2) 40 (25%) 121 0.53143 1 0.055977 1 0.26934 1 0.60648 1 0.36824 1 0.20755 1 0.88055 1 0.35617 1 1 1 Del Peak 20(9p23) 63 (39%) 98 0.012137 1 0.85474 1 1 1 0.11533 1 0.30551 1 0.12352 1 0.41604 1 0.013821 1 0.38038 1 Del Peak 21(9p21.3) 59 (37%) 102 0.2003 1 0.87909 1 0.61805 1 0.37775 1 0.097276 1 0.35695 1 0.59033 1 0.76023 1 0.35689 1 Del Peak 22(9q21.11) 31 (19%) 130 0.15025 1 0.24791 1 1 1 0.10223 1 0.24428 1 0.89281 1 0.061106 1 0.13591 1 0.24603 1 Del Peak 23(10p14) 21 (13%) 140 0.15464 1 0.69736 1 1 1 0.15972 1 0.13232 1 0.20166 1 0.37042 1 1 1 0.50753 1 Del Peak 24(10q22.3) 24 (15%) 137 0.88054 1 0.18798 1 0.5051 1 0.46615 1 0.024302 1 0.48884 1 0.38325 1 0.97325 1 0.55879 1 Del Peak 25(10q23.31) 37 (23%) 124 0.31614 1 0.21565 1 0.34021 1 0.37816 1 0.00059167 0.383 0.9229 1 0.5088 1 0.62119 1 1 1 Del Peak 26(11p15.5) 37 (23%) 124 0.88088 1 0.71333 1 0.84895 1 0.0020895 1 0.029813 1 0.65665 1 0.93369 1 0.81953 1 0.32412 1 Del Peak 27(11q23.2) 34 (21%) 127 0.32038 1 0.89879 1 0.32878 1 0.17003 1 0.50775 1 0.82242 1 0.26004 1 0.87089 1 0.28472 1 Del Peak 28(12p13.2) 24 (15%) 137 0.51817 1 0.41914 1 0.65313 1 0.22807 1 0.2982 1 0.86858 1 0.82877 1 0.19529 1 0.55879 1 Del Peak 29(14q21.1) 36 (22%) 125 0.71193 1 0.32807 1 0.24718 1 0.13956 1 0.019774 1 0.27133 1 0.10507 1 0.40317 1 0.31093 1 Del Peak 30(14q32.33) 40 (25%) 121 0.060681 1 0.31852 1 0.85283 1 0.4353 1 0.074466 1 0.14585 1 0.0037216 1 0.096008 1 0.098556 1 Del Peak 31(15q11.2) 39 (24%) 122 0.22851 1 0.28896 1 0.3515 1 0.0035693 1 0.017855 1 0.046251 1 0.76629 1 0.4588 1 0.092202 1 Del Peak 32(15q15.1) 40 (25%) 121 0.22876 1 0.86425 1 0.26934 1 0.011819 1 0.010312 1 0.0021305 1 0.21337 1 0.084757 1 0.098556 1 Del Peak 33(16p13.3) 20 (12%) 141 0.58677 1 0.03311 1 0.34287 1 0.0067613 1 0.28893 1 0.6813 1 0.39976 1 0.86251 1 0.48942 1 Del Peak 34(16q23.1) 56 (35%) 105 0.060524 1 0.90437 1 0.029138 1 0.10116 1 0.05651 1 0.24032 1 0.056742 1 0.19629 1 0.34287 1 Del Peak 35(17p12) 55 (34%) 106 0.015501 1 0.622 1 0.50087 1 0.047867 1 0.00070301 0.455 0.20282 1 0.52621 1 0.26013 1 0.046807 1 Del Peak 36(17q24.3) 23 (14%) 138 0.73982 1 0.072437 1 0.64954 1 0.047644 1 0.80889 1 0.019554 1 0.4996 1 0.73557 1 1 1 Del Peak 37(18q21.2) 63 (39%) 98 0.30583 1 0.50022 1 1 1 0.54756 1 0.04831 1 0.008713 1 0.77566 1 0.26502 1 1 1 Del Peak 38(18q22.3) 59 (37%) 102 0.39135 1 0.65029 1 1 1 0.93989 1 0.067922 1 0.011755 1 0.77418 1 0.42774 1 0.35689 1 Del Peak 39(19p13.3) 49 (30%) 112 0.14256 1 0.81064 1 0.054853 1 0.32264 1 0.13792 1 0.38778 1 0.67337 1 0.98228 1 0.030279 1 Del Peak 40(19q13.11) 21 (13%) 140 0.36656 1 0.51002 1 1 1 0.014904 1 0.46629 1 0.28195 1 0.46923 1 0.93281 1 0.50753 1 Del Peak 41(20p12.1) 24 (15%) 137 0.21843 1 0.86848 1 1 1 0.7835 1 0.66476 1 0.72014 1 0.46738 1 0.81526 1 0.1607 1 Del Peak 42(21q11.2) 50 (31%) 111 0.91125 1 0.3067 1 0.60333 1 0.30559 1 0.026665 1 0.71074 1 0.56576 1 0.98838 1 0.64632 1 Del Peak 43(22q13.31) 49 (30%) 112 0.52056 1 0.50992 1 0.7282 1 0.028495 1 0.033748 1 0.56127 1 0.89129 1 0.96545 1 0.16554 1 Del Peak 44(Xp22.2) 27 (17%) 134 0.36378 1 0.61291 1 0.83054 1 0.003443 1 0.35414 1 0.52391 1 0.91963 1 0.89867 1 1 1 Del Peak 45(Xp21.1) 27 (17%) 134 0.38194 1 0.97729 1 0.13166 1 0.014188 1 0.40437 1 0.25755 1 0.70521 1 0.82804 1 0.59052 1 Del Peak 46(Xq21.33) 21 (13%) 140 0.29537 1 0.94012 1 1 1 0.34206 1 0.22375 1 0.46115 1 0.72592 1 0.15976 1 0.50753 1