
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.84.4098/Clusters2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.84.4098/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/BRCA-TP/2710031/1.GDAC_mergedClustering.Finished/BRCA-TP.mergedcluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/BRCA-TP/2587649/1.GDAC_clinicalDataPicker.Finished/BRCA-TP.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ALL", "-oT=", "-nV=Nozzle.R1", "-OP=AGGREGRATED_CLUSTER", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"  "-oT="
[1] "opt"                     "-OP=AGGREGRATED_CLUSTER"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"                 "AGGREGRATED_CLUSTER"
[1] "dx" ""  

nPatients in clinical file=869, in cluster file=914, common to both=869
[1]  10 869
[1] "MRNA_CNMF"
[1] 3
  1   2   3 
268  93 166 
  1   2   3 
268  93 166 
[1] "MRNA_CHIERARCHICAL"
[1] 3
  1   2   3 
127 264 136 
  1   2   3 
127 264 136 
[1] "CN_CNMF"
[1] 3
  1   2   3   4   5 
318  73 196 204  55 
  1   2   3   4   5 
318  73 196 204  55 
[1] "METHLYATION_CNMF"
[1] 3
  1   2   3   4   5   6 
 96 139  80 125  33  82 
  1   2   3   4   5   6 
 96 139  80 125  33  82 
[1] "RPPA_CNMF"
[1] 3
  1   2   3 
152 136 120 
  1   2   3 
152 136 120 
[1] "RPPA_CHIERARCHICAL"
[1] 3
  1   2   3 
163 115 130 
  1   2   3 
163 115 130 
[1] "MRNASEQ_CNMF"
[1] 3
  1   2   3 
239 156 441 
  1   2   3 
239 156 441 
[1] "MRNASEQ_CHIERARCHICAL"
[1] 3
  1   2   3 
418 219 199 
  1   2   3 
418 219 199 
[1] "MIRSEQ_CNMF"
[1] 3
  1   2   3 
173 431 243 
  1   2   3 
173 431 243 
[1] "MIRSEQ_CHIERARCHICAL"
[1] 3
  1   2   3 
194 594  59 
  1   2   3 
194 594  59 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "VITALSTATUS"                           
 [5] "DCCUPLOADDATE"                         
 [6] "PRIMARYSITEOFDESEASE"                  
 [7] "GENDER"                                
 [8] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
 [9] "DAYSTOLASTKNOWNALIVE"                  
[10] "RADIATIONTHERAPY"                      
[11] "RADIATIONS.RADIATION.REGIMENINDICATION"
[12] "DISTANT.METASTASIS"                    
[13] "LYMPH.NODE.METASTASIS"                 
[14] "NUMBER.OF.LYMPH.NODES"                 
[15] "TUMOR.STAGECODE"                       
[16] "NEOPLASM.DISEASESTAGE"                 
[17] "BATCHNUMBER"                           

Input Data has 17 rows and 869 columns.

[1] "Batch" "17"   
[1] "Last Follow UP"
TCGA-A1-A0SB TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SH 
         259          437         1320         1463          433         1437 
TCGA-A1-A0SI TCGA-A1-A0SJ TCGA-A1-A0SK TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SO 
         634          426           NA          242         1196          852 
TCGA-A1-A0SP TCGA-A1-A0SQ TCGA-A2-A04N TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04R 
         583          553         3153           NA         1275         2364 
TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04V TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A04Y 
        1950          670           NA         1918         1349          763 
TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CP TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT 
        1827           NA         2495         2392         2298         1917 
TCGA-A2-A0CU TCGA-A2-A0CV TCGA-A2-A0CW TCGA-A2-A0CX TCGA-A2-A0CY TCGA-A2-A0CZ 
          NA         1870         1750         1303         1288         1338 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM 
         643          786          761          736          496         2757 
TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0EQ TCGA-A2-A0ER TCGA-A2-A0ES TCGA-A2-A0ET 
        2515         2181         2053         1902         1001          807 
TCGA-A2-A0EU TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0EY TCGA-A2-A0ST 
         733          545          770          549          485         1643 
TCGA-A2-A0SU TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0SX TCGA-A2-A0SY TCGA-A2-A0T0 
        1351           NA           NA         1288         1154          337 
TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T5 TCGA-A2-A0T6 
         322           NA          456          395          321          344 
TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YE TCGA-A2-A0YF TCGA-A2-A0YG 
         397          643          550          252          289          404 
TCGA-A2-A0YH TCGA-A2-A0YI TCGA-A2-A0YJ TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A0YM 
         379          358          326          334          268          661 
TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW TCGA-A2-A1FX TCGA-A2-A1FZ TCGA-A2-A1G0 
          NA          460          221          935          409          380 
TCGA-A2-A1G1 TCGA-A2-A1G4 TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25B 
         371          372          132         1285         2968          258 
TCGA-A2-A25C TCGA-A2-A25D TCGA-A2-A25E TCGA-A2-A25F TCGA-A2-A3KC TCGA-A2-A3KD 
         285          243         2511          113          363          803 
TCGA-A7-A0CD TCGA-A7-A0CE TCGA-A7-A0CG TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0D9 
         170          253          166          161          188          159 
TCGA-A7-A0DA TCGA-A7-A0DB TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A13F TCGA-A7-A13G 
         373          140          267          287          196          208 
TCGA-A7-A26E TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26H TCGA-A7-A26I TCGA-A7-A26J 
         421          257          209           64          122           67 
TCGA-A7-A2KD TCGA-A7-A3IY TCGA-A7-A3IZ TCGA-A7-A3J0 TCGA-A7-A3J1 TCGA-A7-A3RF 
         181          151          148           76           75           54 
TCGA-A8-A06N TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06R TCGA-A8-A06T 
          NA          396          396           31          546         1249 
TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A075 TCGA-A8-A076 
          NA           NA          791           31          517         1641 
TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07C TCGA-A8-A07E TCGA-A8-A07F TCGA-A8-A07G 
         274         1004          580          608          576          576 
TCGA-A8-A07I TCGA-A8-A07J TCGA-A8-A07L TCGA-A8-A07O TCGA-A8-A07P TCGA-A8-A07R 
         426          365          517          304          334          273 
TCGA-A8-A07S TCGA-A8-A07U TCGA-A8-A07W TCGA-A8-A07Z TCGA-A8-A081 TCGA-A8-A082 
         242          303          304          853           NA          549 
TCGA-A8-A083 TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08B 
          NA          458         1124          396           30          702 
TCGA-A8-A08C TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08H TCGA-A8-A08I TCGA-A8-A08J 
         607          549          606           NA          365           NA 
TCGA-A8-A08L TCGA-A8-A08O TCGA-A8-A08P TCGA-A8-A08R TCGA-A8-A08S TCGA-A8-A08T 
          NA          942          942           30          580         2830 
TCGA-A8-A08X TCGA-A8-A08Z TCGA-A8-A090 TCGA-A8-A091 TCGA-A8-A092 TCGA-A8-A093 
        1034         1217           NA          580          518          545 
TCGA-A8-A094 TCGA-A8-A095 TCGA-A8-A096 TCGA-A8-A097 TCGA-A8-A099 TCGA-A8-A09A 
          NA         1276           NA          365          304          304 
TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09D TCGA-A8-A09E TCGA-A8-A09G TCGA-A8-A09I 
         365           31          396          942           NA         1006 
TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A09T 
         911          457           31          761          273          578 
TCGA-A8-A09V TCGA-A8-A09W TCGA-A8-A09X TCGA-A8-A09Z TCGA-A8-A0A1 TCGA-A8-A0A2 
         457           30           NA           NA          365          578 
TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-A8-A0A7 TCGA-A8-A0A9 TCGA-A8-A0AB TCGA-A8-A0AD 
         396          640           30          396          517         1157 
TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A23G TCGA-AC-A23H TCGA-AC-A2B8 TCGA-AC-A2BK 
          29           72          329           81           44         1172 
TCGA-AC-A2BM TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FM 
        1162           44         1685         1125         1180           NA 
TCGA-AC-A2FO TCGA-AC-A2QH TCGA-AC-A2QI TCGA-AC-A2QJ TCGA-AC-A3BB TCGA-AC-A3HN 
        1542           31           28           69           30           21 
TCGA-AC-A3OD TCGA-AC-A3TN TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A046 
          35           34           10           10            7           10 
TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AJ TCGA-AN-A0AK 
          19           89           54           52          243          223 
TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AS TCGA-AN-A0AT TCGA-AN-A0FD 
         197            5            9            9           10          195 
TCGA-AN-A0FF TCGA-AN-A0FJ TCGA-AN-A0FK TCGA-AN-A0FL TCGA-AN-A0FN TCGA-AN-A0FS 
         140          241          212          230          218          191 
TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0FX TCGA-AN-A0FY TCGA-AN-A0FZ 
         183           10           11           10           10           10 
TCGA-AN-A0G0 TCGA-AN-A0XL TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR 
          16           10           10          375            9           10 
TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AN-A0XU TCGA-AN-A0XV TCGA-AN-A0XW TCGA-AO-A03L 
          10           10           10          162          170         2442 
TCGA-AO-A03M TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A03R TCGA-AO-A03T 
        1455         1645           NA         2576         1707         1187 
TCGA-AO-A03U TCGA-AO-A03V TCGA-AO-A0J2 TCGA-AO-A0J3 TCGA-AO-A0J4 TCGA-AO-A0J5 
          NA          886          585          302          294          735 
TCGA-AO-A0J6 TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JA TCGA-AO-A0JB 
         775          260          277         1255          346         1150 
TCGA-AO-A0JC TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JI 
        1547         1813         1965          354          449         1172 
TCGA-AO-A0JJ TCGA-AO-A0JL TCGA-AO-A0JM TCGA-AO-A124 TCGA-AO-A125 TCGA-AO-A126 
        1512         1319         1826         3119         3018         2850 
TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12A TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12D 
        2877         2923         2754         2359         1993         1948 
TCGA-AO-A12E TCGA-AO-A12F TCGA-AO-A12G TCGA-AO-A12H TCGA-AO-A1KO TCGA-AO-A1KP 
        1742         1471         1265          862          448         2513 
TCGA-AO-A1KQ TCGA-AO-A1KR TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A04J 
        1519         2140           16          541          439          159 
TCGA-AQ-A04L TCGA-AQ-A0Y5 TCGA-AQ-A1H2 TCGA-AQ-A1H3 TCGA-AR-A0TP TCGA-AR-A0TQ 
        3344           NA          230          138         2392         1500 
TCGA-AR-A0TR TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TU TCGA-AR-A0TV TCGA-AR-A0TW 
          NA         1138         1679          360          904          739 
TCGA-AR-A0TX TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U2 
          15           NA         1313            8          185           NA 
TCGA-AR-A0U3 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AK 
        2263         1627         2298         1881         1604         1558 
TCGA-AR-A1AL TCGA-AR-A1AN TCGA-AR-A1AO TCGA-AR-A1AP TCGA-AR-A1AQ TCGA-AR-A1AR 
        1485         1329         1324         1215         1309           NA 
TCGA-AR-A1AS TCGA-AR-A1AT TCGA-AR-A1AU TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A1AX 
        1242           NA         1409         1295         1072         1103 
TCGA-AR-A1AY TCGA-AR-A24H TCGA-AR-A24K TCGA-AR-A24L TCGA-AR-A24M TCGA-AR-A24N 
         614         3333         1548         2221         1990         2074 
TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24Q TCGA-AR-A24R TCGA-AR-A24S TCGA-AR-A24T 
        1997           26         2008         1745         1888         1620 
TCGA-AR-A24U TCGA-AR-A24V TCGA-AR-A24W TCGA-AR-A24X TCGA-AR-A24Z TCGA-AR-A250 
        1623         1648         1550         1465         1574         1707 
TCGA-AR-A251 TCGA-AR-A252 TCGA-AR-A254 TCGA-AR-A255 TCGA-AR-A256 TCGA-AR-A2LE 
        1373         1236         1212         1058           NA         3913 
TCGA-AR-A2LH TCGA-AR-A2LK TCGA-AR-A2LL TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
          NA         1303          223         1217          519          633 
TCGA-AR-A2LQ TCGA-AR-A2LR TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I5 TCGA-B6-A0I6 
         516          620           NA         3826         4549           NA 
TCGA-B6-A0I8 TCGA-B6-A0I9 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IE 
          NA           NA         6718           NA           NA           NA 
TCGA-B6-A0IG TCGA-B6-A0IH TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IM TCGA-B6-A0IN 
          NA           NA         5383           NA         3836           NA 
TCGA-B6-A0IO TCGA-B6-A0IP TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RG TCGA-B6-A0RH 
        3350         3374         3871         6434         2082         5748 
TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP 
        6795           NA           NA         5261         4928           NA 
TCGA-B6-A0RQ TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0RV TCGA-B6-A0WS 
          NA           NA         2721         3991         4788           NA 
TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WX TCGA-B6-A0WY TCGA-B6-A0WZ 
        5396           NA          546           NA           NA         3941 
TCGA-B6-A0X0 TCGA-B6-A0X1 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A0X7 TCGA-B6-A1KC 
          NA         5671           NA           NA           NA         1326 
TCGA-B6-A1KF TCGA-B6-A1KI TCGA-B6-A1KN TCGA-B6-A2IU TCGA-BH-A0AU TCGA-BH-A0AV 
        3088         1463         3330         4840          746         1180 
TCGA-BH-A0AW TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B1 TCGA-BH-A0B3 
         622          777          867         1427         1148         1203 
TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0B6 TCGA-BH-A0B7 TCGA-BH-A0B8 TCGA-BH-A0B9 
        1191         1471         1732         1733         1569         1572 
TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BD TCGA-BH-A0BF TCGA-BH-A0BG TCGA-BH-A0BJ 
        1132          974          554          781          756          660 
TCGA-BH-A0BL TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BQ TCGA-BH-A0BR 
        1339         1117         1085         1481          826         1632 
TCGA-BH-A0BS TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0BW TCGA-BH-A0BZ TCGA-BH-A0C0 
        1640         1386         1519          355         1492         1270 
TCGA-BH-A0C1 TCGA-BH-A0C3 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DE TCGA-BH-A0DG 
        1338         1464         1305         1393          948          713 
TCGA-BH-A0DH TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DL TCGA-BH-A0DO TCGA-BH-A0DP 
        1156          673          423         1467          525          476 
TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX TCGA-BH-A0DZ 
          98           77         1170         1374         1442          495 
TCGA-BH-A0E0 TCGA-BH-A0E1 TCGA-BH-A0E2 TCGA-BH-A0E6 TCGA-BH-A0E7 TCGA-BH-A0E9 
         133          477          376          292         1362         1405 
TCGA-BH-A0EA TCGA-BH-A0EB TCGA-BH-A0EE TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0GZ 
          NA          745          943          743          917          328 
TCGA-BH-A0H0 TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0H9 
         461         1149         1080          747          701         1247 
TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HK TCGA-BH-A0HL 
         856          806          727          619          178           72 
TCGA-BH-A0HN TCGA-BH-A0HO TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0HU TCGA-BH-A0HW 
         516           76          414         1121          392         1560 
TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A0W3 TCGA-BH-A0W4 TCGA-BH-A0W5 
         829          867          170          180          175          543 
TCGA-BH-A0W7 TCGA-BH-A0WA TCGA-BH-A18F TCGA-BH-A18G TCGA-BH-A18H TCGA-BH-A18I 
         558          372          268           61           NA          220 
TCGA-BH-A18J TCGA-BH-A18K TCGA-BH-A18L TCGA-BH-A18M TCGA-BH-A18N TCGA-BH-A18P 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A18T TCGA-BH-A18U TCGA-BH-A18V 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1EN TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EV 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1EW TCGA-BH-A1EX TCGA-BH-A1EY TCGA-BH-A1F0 TCGA-BH-A1F2 TCGA-BH-A1F5 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1F6 TCGA-BH-A1F8 TCGA-BH-A1FB TCGA-BH-A1FC TCGA-BH-A1FD TCGA-BH-A1FE 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1FG TCGA-BH-A1FH TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FN 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1FR TCGA-BH-A1FU TCGA-BH-A201 TCGA-BH-A202 TCGA-BH-A203 TCGA-BH-A204 
          NA           NA          209           22           NA           NA 
TCGA-BH-A208 TCGA-BH-A209 TCGA-BH-A28O TCGA-BH-A28Q TCGA-C8-A12K TCGA-C8-A12L 
          NA           NA          323          196           NA           NA 
TCGA-C8-A12M TCGA-C8-A12N TCGA-C8-A12O TCGA-C8-A12P TCGA-C8-A12Q TCGA-C8-A12T 
          NA           NA           NA           NA           NA           NA 
TCGA-C8-A12U TCGA-C8-A12V TCGA-C8-A12W TCGA-C8-A12X TCGA-C8-A12Y TCGA-C8-A12Z 
          NA           NA           NA           NA           NA           NA 
TCGA-C8-A130 TCGA-C8-A131 TCGA-C8-A132 TCGA-C8-A133 TCGA-C8-A134 TCGA-C8-A135 
          NA           NA           NA           NA           NA           NA 
TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HE TCGA-C8-A1HF TCGA-C8-A1HG TCGA-C8-A1HI 
           3            7           NA           NA           NA            2 
TCGA-C8-A1HJ TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A1HN TCGA-C8-A1HO 
           5            7            2            6            2           NA 
TCGA-C8-A26V TCGA-C8-A26W TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A26Z TCGA-C8-A273 
           9            7           11           13            4            6 
TCGA-C8-A274 TCGA-C8-A275 TCGA-C8-A278 TCGA-C8-A27A TCGA-C8-A27B TCGA-D8-A13Y 
           1            1            1          371           30          264 
TCGA-D8-A13Z TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A145 
         210           27          113           61          172           49 
TCGA-D8-A146 TCGA-D8-A147 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JB 
         344            2          256          248           18           NA 
TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JH 
         178          273           57           96          187          284 
TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1JM TCGA-D8-A1JN 
          21          274          109          265          238          217 
TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1JU TCGA-D8-A1X5 TCGA-D8-A1X6 
         167          105          123          106          171          236 
TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XC 
          85          272          380          274          201           81 
TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XG TCGA-D8-A1XJ TCGA-D8-A1XK TCGA-D8-A1XL 
         155          197          196          352          326          319 
TCGA-D8-A1XM TCGA-D8-A1XO TCGA-D8-A1XQ TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XT 
         218          242          177          168           18          193 
TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XW TCGA-D8-A1XY TCGA-D8-A1XZ TCGA-D8-A1Y0 
         149          146          117           81          120          166 
TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A1Y3 TCGA-D8-A27E TCGA-D8-A27F TCGA-D8-A27G 
         115           72          124          182          227          209 
TCGA-D8-A27H TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L TCGA-D8-A27M TCGA-D8-A27N 
         140          185          118          125          144          145 
TCGA-D8-A27P TCGA-D8-A27R TCGA-D8-A27T TCGA-D8-A27V TCGA-D8-A27W TCGA-E2-A105 
          22           90          135           73           15         1163 
TCGA-E2-A106 TCGA-E2-A107 TCGA-E2-A108 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B 
        1555          763          124         1172          352          748 
TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A14N TCGA-E2-A14O TCGA-E2-A14P 
         853          418          360         1350         1172          487 
TCGA-E2-A14Q TCGA-E2-A14R TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14U TCGA-E2-A14V 
         974          845          834          890          838          748 
TCGA-E2-A14W TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A152 
         833          692          688          518          591          588 
TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A158 TCGA-E2-A159 
         586          325          553          481          450          515 
TCGA-E2-A15A TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15F TCGA-E2-A15G 
         502          496          315          517          468          315 
TCGA-E2-A15H TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15M 
          42          411          463           34          331          234 
TCGA-E2-A15O TCGA-E2-A15P TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1AZ 
         395          315          330          274          267         1964 
TCGA-E2-A1B0 TCGA-E2-A1B1 TCGA-E2-A1B4 TCGA-E2-A1B5 TCGA-E2-A1B6 TCGA-E2-A1BC 
        1271         1361          911          774          338          297 
TCGA-E2-A1BD TCGA-E2-A1IE TCGA-E2-A1IF TCGA-E2-A1IG TCGA-E2-A1IH TCGA-E2-A1II 
         317          983          956          755          658          850 
TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO TCGA-E2-A1IU 
         725          518           14          392          448          127 
TCGA-E2-A1L6 TCGA-E2-A1L7 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E2-A1LB 
        1312          633         1015          388          463          972 
TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK TCGA-E2-A1LL 
          NA          350         2875         2750           NA         1014 
TCGA-E2-A1LS TCGA-E2-A2P5 TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E9-A1N3 TCGA-E9-A1N4 
         239          326          167          217           NA           NA 
TCGA-E9-A1N5 TCGA-E9-A1N6 TCGA-E9-A1N8 TCGA-E9-A1N9 TCGA-E9-A1NA TCGA-E9-A1NC 
          NA           NA           NA           NA           NA           NA 
TCGA-E9-A1ND TCGA-E9-A1NE TCGA-E9-A1NF TCGA-E9-A1NG TCGA-E9-A1NH TCGA-E9-A1NI 
          NA           NA           NA           NA           NA           NA 
TCGA-E9-A1QZ TCGA-E9-A1R0 TCGA-E9-A1R2 TCGA-E9-A1R3 TCGA-E9-A1R4 TCGA-E9-A1R5 
          NA           NA           19           64           29           42 
TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RA TCGA-E9-A1RB TCGA-E9-A1RC TCGA-E9-A1RD 
          84           34           29           21         1228           20 
TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A1RH TCGA-E9-A1RI TCGA-E9-A226 
          47           38           35           14           48           16 
TCGA-E9-A227 TCGA-E9-A228 TCGA-E9-A229 TCGA-E9-A22A TCGA-E9-A22B TCGA-E9-A22D 
          24           NA           NA           NA           NA           NA 
TCGA-E9-A22E TCGA-E9-A22G TCGA-E9-A22H TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A245 
          NA           NA           NA           43           20           25 
TCGA-E9-A247 TCGA-E9-A248 TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A295 TCGA-E9-A2JS 
          12           21           28           10           21           13 
TCGA-E9-A2JT TCGA-E9-A3HO TCGA-EW-A1IW TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1IZ 
          23           19          252         1082          258          260 
TCGA-EW-A1J1 TCGA-EW-A1J2 TCGA-EW-A1J3 TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OV 
         282          139          252          227          595          522 
TCGA-EW-A1OW TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ TCGA-EW-A1P0 TCGA-EW-A1P1 
         463          562          593          941         1121          919 
TCGA-EW-A1P3 TCGA-EW-A1P4 TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1P7 TCGA-EW-A1P8 
         987          501          365          312          635           NA 
TCGA-EW-A1PA TCGA-EW-A1PB TCGA-EW-A1PC TCGA-EW-A1PD TCGA-EW-A1PE TCGA-EW-A1PF 
         267          608          186          174          106          139 
TCGA-EW-A1PG TCGA-EW-A1PH TCGA-EW-A2FR TCGA-EW-A2FS TCGA-EW-A2FV TCGA-EW-A2FW 
         875          139         1120         1173          238          190 
TCGA-GI-A2C8 TCGA-GI-A2C9 TCGA-GM-A2D9 TCGA-GM-A2DA TCGA-GM-A2DB TCGA-GM-A2DC 
         212          703           NA         5909         1615         1628 
TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DH TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL 
        1309         1299         1286         1883         1896         2762 
TCGA-GM-A2DM TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NW TCGA-GM-A3NY 
        2331         2352         1622         2982          743 
Variable 1:'AGE':	nDistinctValues=64,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=94,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=531,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=25,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=16,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 10:'RADIATION.THERAPY':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'DISTANT.METASTASIS':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 13:'LYMPH.NODE.METASTASIS':	nDistinctValues=16,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 14:'NUMBER.OF.LYMPH.NODES':	nDistinctValues=28,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 15:'TUMOR.STAGECODE':	nDistinctValues=12,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 16:'NEOPLASM.DISEASESTAGE':	nDistinctValues=13,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 17:'BATCH.NUMBER':	nDistinctValues=37,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                                   
[2] "GENDER"                                
[3] "RADIATIONS.RADIATION.REGIMENINDICATION"
[4] "DISTANT.METASTASIS"                    
[5] "LYMPH.NODE.METASTASIS"                 
[6] "NUMBER.OF.LYMPH.NODES"                 
[7] "TUMOR.STAGECODE"                       
[8] "NEOPLASM.DISEASESTAGE"                 
[1] "TUMOR.?STAGE" "7"           
[1] "stage2"
vv
 T1 T1A T1B T1C  T2 T2B  T3 T3A  T4 T4B T4D  TX 
 38   1  10 181 508   1  92   1   7  25   2   3 
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 869 columns, 1 survival variables, and 8 non-survival variables.
AGE, nv=64, binary=FALSE, numeric=TRUE
GENDER, nv=2, binary=FALSE, numeric=FALSE
RADIATIONS.RADIATION.REGIMENINDICATION, nv=2, binary=FALSE, numeric=FALSE
DISTANT.METASTASIS, nv=4, binary=FALSE, numeric=FALSE
LYMPH.NODE.METASTASIS, nv=16, binary=FALSE, numeric=FALSE
NUMBER.OF.LYMPH.NODES, nv=28, binary=FALSE, numeric=TRUE
TUMOR.STAGECODE, nv=0, binary=FALSE, numeric=TRUE
NEOPLASM.DISEASESTAGE, nv=13, binary=FALSE, numeric=FALSE

Clustering(1) Variable = MRNA_CNMF
D1V1, survival
          sevent
clus2        0   1
  subtype1 227  30
  subtype2  78  10
  subtype3 125  25
subtype1 subtype2 subtype3 
     257       88      150 
subtype1 subtype2 subtype3 
      30       10       25 
$subtype1
TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SM TCGA-A2-A04N TCGA-A2-A04R TCGA-A2-A04V 
       14.37        43.40         7.96       103.66        77.72        63.12 
TCGA-A2-A04Y TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU TCGA-A2-A0D3 
       25.08        78.64        75.55        63.02         5.16        24.20 
TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0EV 
       16.31        90.64        62.53        26.53        24.10        17.92 
TCGA-A2-A0SU TCGA-A2-A0SY TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T5 TCGA-A2-A0YC 
       44.42        37.94        14.99        12.99        10.55        21.14 
TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YI TCGA-A7-A0CD TCGA-A7-A0CH TCGA-A7-A0D9 
       18.08         9.50        11.77         5.59         5.29         5.23 
TCGA-A7-A0DB TCGA-A7-A13F TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06T 
        4.60         6.44        13.02        13.02         1.02        41.06 
TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07F TCGA-A8-A07G 
       26.01         1.02         9.01        33.01        18.94        18.94 
TCGA-A8-A07I TCGA-A8-A07J TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S TCGA-A8-A07W 
       14.01        12.00        17.00        10.98         7.96         9.99 
TCGA-A8-A07Z TCGA-A8-A082 TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A 
       28.04        18.05        15.06        36.95        13.02         0.99 
TCGA-A8-A08C TCGA-A8-A08G TCGA-A8-A08O TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A08Z 
       19.96        19.92        30.97        19.07        93.04        40.01 
TCGA-A8-A091 TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A097 TCGA-A8-A099 TCGA-A8-A09B 
       19.07        17.92        41.95        12.00         9.99        12.00 
TCGA-A8-A09C TCGA-A8-A09D TCGA-A8-A09E TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N 
        1.02        13.02        30.97        29.95        15.02         1.02 
TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A09W TCGA-A8-A0A1 
       25.02         8.98        19.00        15.02         0.99        12.00 
TCGA-A8-A0A2 TCGA-A8-A0A4 TCGA-A8-A0A9 TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AN-A03X 
       19.00        13.02        13.02        17.00        38.04         0.33 
TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A046 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0FD 
        0.33         0.23         0.33         0.62         2.93         6.41 
TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0FS TCGA-AN-A0FT TCGA-AN-A0FW TCGA-AN-A0FY 
        4.60         6.97         6.28         6.02         0.36         0.33 
TCGA-AN-A0FZ TCGA-AN-A0XL TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS 
        0.33         0.33        12.33         0.30         0.33         0.33 
TCGA-AN-A0XT TCGA-AN-A0XV TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03N TCGA-AO-A03P 
        0.33         5.33         5.59        80.28        54.08        84.69 
TCGA-AO-A03T TCGA-AO-A03V TCGA-AO-A0J3 TCGA-AO-A0J5 TCGA-AO-A0J7 TCGA-AO-A0J8 
       39.02        29.13         9.93        24.16         8.55         9.11 
TCGA-AO-A0JA TCGA-AO-A0JF TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A125 TCGA-AO-A126 
       11.38        11.64        38.53        60.03        99.22        93.70 
TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12E TCGA-AO-A12G TCGA-AO-A12H TCGA-AQ-A04H 
       77.56        65.52        57.27        41.59        28.34        14.43 
TCGA-AR-A0TR TCGA-AR-A0TZ TCGA-AR-A0U3 TCGA-AR-A1AL TCGA-AR-A1AP TCGA-AR-A1AS 
        5.26        43.17        74.40        48.82        39.95        40.83 
TCGA-AR-A1AW TCGA-B6-A0I5 TCGA-B6-A0I8 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC 
       35.24       149.56        24.62       220.87       129.57        50.70 
TCGA-B6-A0IE TCGA-B6-A0IG TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0IP 
       65.69       146.50       126.12        84.59       110.14       110.93 
TCGA-B6-A0RG TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO 
       68.45       223.40        81.17        78.02       172.96       162.02 
TCGA-B6-A0RP TCGA-B6-A0RV TCGA-B6-A0WS TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW 
      102.77       157.41        97.48       177.40        79.63        17.95 
TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A0X7 TCGA-BH-A0AU 
      129.57       129.70        28.24        68.94        58.88        24.53 
TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B1 TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0B8 
       25.55        28.50        37.74        39.16        48.36        51.58 
TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BD TCGA-BH-A0BS TCGA-BH-A0BT TCGA-BH-A0BV 
       37.22        32.02        18.21        53.92        45.57        49.94 
TCGA-BH-A0C1 TCGA-BH-A0C3 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DE TCGA-BH-A0DH 
       43.99        48.13        42.90        45.80        31.17        38.01 
TCGA-BH-A0DQ TCGA-BH-A0E1 TCGA-BH-A0E2 TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0EI 
        3.22        15.68        12.36        44.78        24.49        24.43 
TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H3 TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0H9 
       10.78        15.16        37.78        24.56        23.05        41.00 
TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HK TCGA-BH-A0HO TCGA-BH-A0HQ 
       26.50        23.90        20.35         5.85         2.50        36.85 
TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A0W4 
       12.89        51.29        27.25        28.50         5.92         5.75 
TCGA-BH-A0W7 TCGA-BH-A18I TCGA-BH-A18J TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18P 
       18.35         7.23        20.09        26.66        37.74        30.28 
TCGA-BH-A18S TCGA-BH-A18T TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EV 
       66.05         7.36        91.99       113.82        82.85        12.00 
TCGA-BH-A1EW TCGA-C8-A1HI TCGA-C8-A1HL TCGA-C8-A1HN TCGA-D8-A140 TCGA-D8-A146 
       55.69         0.07         0.07         0.07         0.89        11.31 
TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B 
       38.24        51.12        25.08        38.53        11.57        24.59 
TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A14O TCGA-E2-A14Q TCGA-E2-A14S TCGA-E2-A14T 
       13.74        11.84        38.53        32.02        27.42        29.26 
TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 
       24.59        27.39        19.27        10.68        18.18        15.81 
TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15J 
       16.31        10.36        15.39        10.36         1.38        15.22 
TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15M TCGA-E2-A15O TCGA-E2-A15P TCGA-E2-A15R 
        1.12        10.88         7.69        12.99        10.36        10.85 
TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1BC TCGA-E2-A1BD 
        9.01         8.78        29.95         9.76        10.42 

$subtype2
TCGA-A1-A0SH TCGA-A1-A0SJ TCGA-A2-A04Q TCGA-A2-A0CL TCGA-A2-A0CP TCGA-A2-A0CV 
       47.24        14.01        41.92        60.07        82.03        61.48 
TCGA-A2-A0CZ TCGA-A2-A0D2 TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0ES TCGA-A2-A0EW 
       43.99        25.02        82.68        71.70        32.91        25.32 
TCGA-A2-A0EX TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YK 
       18.05        54.02        42.35        11.31        13.05        10.98 
TCGA-A2-A0YL TCGA-A7-A0CG TCGA-A8-A07E TCGA-A8-A09A TCGA-A8-A0A6 TCGA-AN-A0FN 
        8.81         5.46        19.99         9.99        21.04         7.17 
TCGA-AN-A0FX TCGA-AO-A03R TCGA-AO-A03U TCGA-AO-A0J9 TCGA-AO-A0JB TCGA-AO-A0JC 
        0.33        56.12        59.05        41.26        37.81        50.86 
TCGA-AO-A0JG TCGA-AO-A0JJ TCGA-AO-A12A TCGA-AO-A12F TCGA-AQ-A04J TCGA-AR-A1AJ 
       14.76        49.71        90.54        48.36         5.23        52.73 
TCGA-AR-A1AK TCGA-AR-A1AN TCGA-AR-A1AO TCGA-AR-A1AR TCGA-AR-A1AU TCGA-AR-A1AX 
       51.22        43.69        43.53        17.19        46.32        36.26 
TCGA-B6-A0IH TCGA-B6-A0RQ TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX TCGA-B6-A0WY 
      112.37       140.48        89.46       131.21        21.47       113.75 
TCGA-BH-A0AV TCGA-BH-A0B0 TCGA-BH-A0B7 TCGA-BH-A0BF TCGA-BH-A0BJ TCGA-BH-A0BL 
       38.79        46.92        56.98        25.68        21.70        44.02 
TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BQ TCGA-BH-A0BR TCGA-BH-A0DG 
       36.72        35.67        48.69        27.16        53.65        23.44 
TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DO TCGA-BH-A0DP TCGA-BH-A0DS TCGA-BH-A0DT 
       22.13        13.91        17.26        15.65         2.53        38.47 
TCGA-BH-A0DX TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0H5 TCGA-BH-A0HA TCGA-BH-A0HP 
       47.41        46.19        32.65        35.51        28.14        13.61 
TCGA-BH-A0RX TCGA-BH-A0W5 TCGA-BH-A18F TCGA-BH-A18M TCGA-BH-A1EU TCGA-BH-A1F0 
        5.59        17.85         8.81        72.56        42.28        25.81 
TCGA-D8-A141 TCGA-D8-A142 TCGA-D8-A145 TCGA-E2-A108 TCGA-E2-A14Z TCGA-E2-A15E 
        3.72         2.01         1.61         4.08        17.03        17.00 
TCGA-E2-A15I TCGA-E2-A1AZ TCGA-E2-A1B1 TCGA-E2-A1B6 
       13.51        64.57        44.75        11.11 

$subtype3
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U 
       31.79        28.01        19.17        17.98        64.11        22.03 
TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A0CM TCGA-A2-A0CW TCGA-A2-A0CX TCGA-A2-A0CY 
       63.06        44.35        24.79        57.53        42.84        42.35 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0EQ TCGA-A2-A0EY TCGA-A2-A0SV TCGA-A2-A0SW 
       21.14        25.84        67.50        15.95        27.12        44.84 
TCGA-A2-A0T0 TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YG TCGA-A2-A0YH 
       11.08        10.59         7.96         8.28        13.28        12.46 
TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A2-A0YT TCGA-A7-A0CE TCGA-A7-A0CJ TCGA-A7-A0DA 
       10.72        21.73        23.77         8.32         6.18        12.26 
TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A06R TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A075 
        8.78         9.44        17.95        29.00        31.00        17.00 
TCGA-A8-A076 TCGA-A8-A07C TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08B 
       53.95        19.07         9.99         8.98         9.96        23.08 
TCGA-A8-A08F TCGA-A8-A08I TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A08R 
       18.05        12.00        37.05         9.99        30.97         0.99 
TCGA-A8-A08X TCGA-A8-A092 TCGA-A8-A09I TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AN-A04C 
       33.99        17.03        33.07        14.01         0.99         1.78 
TCGA-AN-A04D TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR 
        1.71         7.99         7.33         6.48         0.16         0.30 
TCGA-AN-A0AS TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FV TCGA-AN-A0G0 
        0.30         0.33         7.92         7.56         0.33         0.53 
TCGA-AN-A0XN TCGA-AN-A0XU TCGA-AO-A03M TCGA-AO-A03O TCGA-AO-A0J2 TCGA-AO-A0J4 
        0.33         0.33        47.84        81.63        19.23         9.67 
TCGA-AO-A0J6 TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A128 
       25.48        59.61        64.60        43.36       102.54        94.59 
TCGA-AO-A129 TCGA-AO-A12D TCGA-AQ-A04L TCGA-AR-A0TP TCGA-AR-A0TQ TCGA-AR-A0TS 
       96.10        64.04       109.94        78.64        49.32        37.41 
TCGA-AR-A0TT TCGA-AR-A0TU TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TX TCGA-AR-A0TY 
       55.20        11.84        29.72        24.30         0.49        55.86 
TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U2 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI 
        0.26         6.08        83.87        53.49        75.55        61.84 
TCGA-AR-A1AQ TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A1AY TCGA-B6-A0I2 TCGA-B6-A0I6 
       43.04        41.82        42.58        20.19       125.79        32.58 
TCGA-B6-A0I9 TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RH 
       12.13       176.98        18.77       127.27       211.53       188.98 
TCGA-B6-A0RS TCGA-B6-A0X1 TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0BG 
      100.67       186.44        20.45        39.55        51.68        24.85 
TCGA-BH-A0BW TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0DL TCGA-BH-A0DZ TCGA-BH-A0E0 
       11.67        49.05        41.75        48.23        16.27         4.37 
TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A0GY TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18K 
        9.60        31.00        30.15        12.23         2.01        90.81 
TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18U TCGA-BH-A18V TCGA-C8-A137 TCGA-C8-A138 
       55.63        37.51        51.39        51.12         0.10         0.23 
TCGA-C8-A1HM TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A143 TCGA-D8-A147 TCGA-E2-A10C 
        0.20         8.68         6.90         5.65         0.07        28.04 
TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A150 
       44.38        16.01        27.78        22.75        22.62        19.43 
TCGA-E2-A152 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A15A TCGA-E2-A1B0 TCGA-E2-A1B5 
       19.33        14.79        16.93        16.50        41.79        25.45 

subtype1 subtype2 subtype3 
    0.07     0.33     0.07 
subtype1 subtype2 subtype3 
  223.40   140.48   211.53 
subtype1 subtype2 subtype3 
  20.350   35.590   22.325 
[1] "0.1 - 223.4 (20.4)" "0.3 - 140.5 (35.6)" "0.1 - 211.5 (22.3)"
  [1] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
  [7] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
 [13] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [19] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [25] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
 [31] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [37] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [43] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
 [49] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
 [55] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [61] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [67] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
 [73] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [79] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [85] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [91] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [97] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[109] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[115] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[121] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[127] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[133] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[139] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[157] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[169] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[175] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[181] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[187] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[199] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[205] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[217] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[223] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[229] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[235] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[241] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[247] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[259] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[265] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[271] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[277] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[283] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[289] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[295] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[301] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[319] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[325] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[331] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[343] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[349] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[361] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[373] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[379] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[385] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[391] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[397] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[403] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[409] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[415] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[421] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[427] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[433] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[439] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[445] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[451] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[457] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[463] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[469] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[475] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[481] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[487] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[493] "subtype2" "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
  [7] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
 [13] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [19] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [25] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
 [31] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [37] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [43] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
 [49] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
 [55] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [61] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [67] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
 [73] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [79] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [85] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [91] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [97] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[109] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[115] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[121] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[127] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[133] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[139] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[157] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[169] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[175] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[181] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[187] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[199] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[205] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[217] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[223] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[229] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[235] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[241] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[247] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[259] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[265] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[271] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[277] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[283] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[289] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[295] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[301] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[319] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[325] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[331] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[343] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[349] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[361] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[373] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[379] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[385] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[391] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[397] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[403] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[409] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[415] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[421] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[427] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[433] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[439] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[445] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[451] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[457] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[463] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[469] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[475] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[481] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[487] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[493] "subtype2" "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
  [7] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
 [13] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [19] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [25] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
 [31] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [37] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [43] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
 [49] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
 [55] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [61] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [67] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
 [73] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [79] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [85] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [91] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [97] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[109] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[115] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[121] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[127] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[133] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[139] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[157] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[169] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[175] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[181] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[187] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[199] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[205] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[217] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[223] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[229] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[235] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[241] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[247] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[259] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[265] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[271] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[277] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[283] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[289] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[295] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[301] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[319] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[325] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[331] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[343] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[349] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[361] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[373] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[379] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[385] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[391] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[397] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[403] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[409] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[415] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[421] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[427] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[433] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[439] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[445] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[451] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[457] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[463] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[469] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[475] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[481] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[487] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[493] "subtype2" "subtype1" "subtype1"
D1V2, continuous
D1V3, binary
          cls
clus         0   1
  subtype1 263   5
  subtype2  93   0
  subtype3 165   1
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  263    5
  subtype2   93    0
  subtype3  165    1
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      263       93      165
  MALE          5        0        1
D1V4, binary
          cls
clus         0   1
  subtype1  70 198
  subtype2  27  66
  subtype3  51 115
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   70  198
  subtype2   27   66
  subtype3   51  115
     clus
vv    subtype1 subtype2 subtype3
  NO        70       27       51
  YES      198       66      115
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        2 248   7  11
  subtype2        0  92   0   1
  subtype3        0 157   7   2
D1V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3C NX
  subtype1 67       9      48 27  43  14   1   10 17  11  5   7   0  9
  subtype2 24       6      20  7  17   3   1    1  3   6  1   3   0  1
  subtype3 47       1      33 25  17   3   0    2 12  12  4   8   1  1
D1V6, multiclass
D1V7, continuous
D1V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1      21       26        5        88        56         38         11
  subtype2      16        6        1        30        18         16          0
  subtype3       5        9        0        67        37         23          4
          vv
clus       STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1          5        7         1      10
  subtype2          3        0         0       3
  subtype3         11        7         0       3
D1V9, multiclass

Clustering(2) Variable = MRNA_CHIERARCHICAL
D2V1, survival
          sevent
clus2        0   1
  subtype1 101  15
  subtype2 209  36
  subtype3 120  14
subtype1 subtype2 subtype3 
     116      245      134 
subtype1 subtype2 subtype3 
      15       36       14 
$subtype1
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T 
       31.79        28.01        19.17        17.98        41.92        64.11 
TCGA-A2-A04U TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0CY TCGA-A2-A0D0 TCGA-A2-A0D1 
       22.03        24.79        42.84        42.35        21.14        25.84 
TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T1 
       25.02        67.50        54.02        42.35        11.08        10.59 
TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A7-A0CE TCGA-A7-A0DA 
        7.96         8.28        10.72        21.73         8.32        12.26 
TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A07C TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U 
        8.78         9.44        19.07         9.99         8.98         9.96 
TCGA-A8-A08L TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AN-A04C 
        9.99         0.99        33.99        14.01         0.99         1.78 
TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AR TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL 
        1.71         6.48         0.30         0.33         7.92         7.56 
TCGA-AN-A0FX TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A0J2 TCGA-AO-A0J4 TCGA-AO-A0J6 
        0.33         0.53         0.33        19.23         9.67        25.48 
TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12D 
       64.60        43.36       102.54        94.59        96.10        64.04 
TCGA-AO-A12F TCGA-AQ-A04J TCGA-AR-A0TP TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0TX 
       48.36         5.23        78.64        37.41        11.84         0.49 
TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ 
        0.26         6.08        53.49        75.55        61.84        52.73 
TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AT TCGA-AR-A1AY TCGA-B6-A0I2 TCGA-B6-A0I6 
       43.04        17.19        41.82        20.19       125.79        32.58 
TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT 
      176.98        18.77       127.27       211.53       100.67        89.46 
TCGA-B6-A0RU TCGA-B6-A0WX TCGA-B6-A0X1 TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 
      131.21        21.47       186.44        38.79        20.45        39.55 
TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BG TCGA-BH-A0BL TCGA-BH-A0BR TCGA-BH-A0BW 
       56.98        51.68        24.85        44.02        53.65        11.67 
TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A0RX TCGA-BH-A0WA 
       48.23         4.37         9.60        31.00         5.59        12.23 
TCGA-BH-A18G TCGA-BH-A18K TCGA-BH-A18Q TCGA-BH-A18V TCGA-D8-A13Y TCGA-D8-A13Z 
        2.01        90.81        55.63        51.12         8.68         6.90 
TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R 
        2.01         5.65         0.07        44.38        16.01        27.78 
TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ 
       22.75        22.62        19.43        14.79        16.93        64.57 
TCGA-E2-A1B0 TCGA-E2-A1B5 
       41.79        25.45 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SJ TCGA-A1-A0SM TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A04W 
       14.37        14.01         7.96        77.72        63.12        63.06 
TCGA-A2-A04X TCGA-A2-A04Y TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU 
       44.35        25.08        78.64        75.55        63.02         5.16 
TCGA-A2-A0CW TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0ER TCGA-A2-A0ET 
       57.53        24.20        16.31        90.64        62.53        26.53 
TCGA-A2-A0EU TCGA-A2-A0EY TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0T5 TCGA-A2-A0T7 
       24.10        15.95        27.12        44.84        10.55        13.05 
TCGA-A2-A0YC TCGA-A2-A0YF TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A7-A0CD 
       21.14         9.50        13.28        12.46        23.77         5.59 
TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A13F TCGA-A8-A06O TCGA-A8-A06P 
        5.29         6.18         5.23         6.44        13.02        13.02 
TCGA-A8-A06Q TCGA-A8-A06R TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y 
        1.02        17.95        41.06        29.00        31.00        26.01 
TCGA-A8-A06Z TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07F 
        1.02        17.00        53.95         9.01        33.01        18.94 
TCGA-A8-A07I TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S TCGA-A8-A07W TCGA-A8-A07Z 
       14.01        17.00        10.98         7.96         9.99        28.04 
TCGA-A8-A082 TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08B 
       18.05        15.06        36.95        13.02         0.99        23.08 
TCGA-A8-A08C TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08I TCGA-A8-A08J TCGA-A8-A08P 
       19.96        18.05        19.92        12.00        37.05        30.97 
TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A091 TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A095 
       19.07        93.04        19.07        17.03        17.92        41.95 
TCGA-A8-A097 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09D TCGA-A8-A09E 
       12.00         9.99        12.00         1.02        13.02        30.97 
TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N TCGA-A8-A09Q TCGA-A8-A09R 
       33.07        29.95        15.02         1.02        25.02         8.98 
TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A09W TCGA-A8-A0A9 TCGA-A8-A0AD TCGA-AN-A03X 
       19.00        15.02         0.99        13.02        38.04         0.33 
TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AJ TCGA-AN-A0AK 
        0.33         0.23         0.62         2.93         7.99         7.33 
TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0FT 
        0.16         0.30         6.41         4.60         6.97         6.02 
TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XN TCGA-AN-A0XO 
        0.33         0.36         0.33         0.33         0.33        12.33 
TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XT TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03N 
        0.30         0.33         0.33         5.59        80.28        54.08 
TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A03V TCGA-AO-A0J3 TCGA-AO-A0J5 TCGA-AO-A0J7 
       81.63        84.69        29.13         9.93        24.16         8.55 
TCGA-AO-A0J8 TCGA-AO-A0JD TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A125 TCGA-AO-A12B 
        9.11        59.61        38.53        60.03        99.22        77.56 
TCGA-AO-A12C TCGA-AO-A12H TCGA-AQ-A04H TCGA-AQ-A04L TCGA-AR-A0TQ TCGA-AR-A0TR 
       65.52        28.34        14.43       109.94        49.32         5.26 
TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 
       29.72        24.30        55.86        43.17        83.87        74.40 
TCGA-AR-A1AS TCGA-AR-A1AW TCGA-B6-A0I5 TCGA-B6-A0I8 TCGA-B6-A0I9 TCGA-B6-A0IA 
       40.83        35.24       149.56        24.62        12.13       220.87 
TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IG TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IO 
      129.57        50.70       146.50       126.12        84.59       110.14 
TCGA-B6-A0RG TCGA-B6-A0RH TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN 
       68.45       188.98       223.40        81.17        78.02       172.96 
TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WZ 
      162.02       102.77       177.40        79.63        17.95       129.57 
TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-BH-A0B1 TCGA-BH-A0B4 TCGA-BH-A0B8 
      129.70        28.24        68.94        37.74        39.16        51.58 
TCGA-BH-A0BA TCGA-BH-A0BS TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0BZ TCGA-BH-A0C0 
       37.22        53.92        45.57        49.94        49.05        41.75 
TCGA-BH-A0C1 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DZ TCGA-BH-A0E1 
       43.99        42.90        45.80        38.01        16.27        15.68 
TCGA-BH-A0E2 TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0GY TCGA-BH-A0GZ TCGA-BH-A0H0 
       12.36        44.78        24.49        30.15        10.78        15.16 
TCGA-BH-A0H3 TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0H9 TCGA-BH-A0HB TCGA-BH-A0HI 
       37.78        24.56        23.05        41.00        26.50        20.35 
TCGA-BH-A0HO TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 
        2.50        12.89        51.29        27.25        28.50         5.92 
TCGA-BH-A18J TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18R TCGA-BH-A18S 
       20.09        26.66        37.74        30.28        37.51        66.05 
TCGA-BH-A18T TCGA-BH-A18U TCGA-BH-A1ES TCGA-BH-A1EV TCGA-C8-A137 TCGA-C8-A138 
        7.36        51.39       113.82        12.00         0.10         0.23 
TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A1HN TCGA-D8-A140 TCGA-E2-A105 TCGA-E2-A106 
        0.07         0.20         0.07         0.89        38.24        51.12 
TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10C TCGA-E2-A10E 
       25.08        38.53        11.57        24.59        28.04        13.74 
TCGA-E2-A14O TCGA-E2-A14Q TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14V TCGA-E2-A14W 
       38.53        32.02        27.42        29.26        24.59        27.39 
TCGA-E2-A152 TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A 
       19.33        19.27        10.68        18.18        15.81        16.50 
TCGA-E2-A15D TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15J TCGA-E2-A15L 
       10.36        15.39        10.36         1.38        15.22        10.88 
TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1BD 
       12.99        10.85         9.01         8.78        10.42 

$subtype3
TCGA-A1-A0SE TCGA-A1-A0SH TCGA-A2-A04N TCGA-A2-A0CL TCGA-A2-A0CP TCGA-A2-A0CV 
       43.40        47.24       103.66        60.07        82.03        61.48 
TCGA-A2-A0CZ TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0ES TCGA-A2-A0EV TCGA-A2-A0EW 
       43.99        82.68        71.70        32.91        17.92        25.32 
TCGA-A2-A0EX TCGA-A2-A0SU TCGA-A2-A0SY TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T6 
       18.05        44.42        37.94        14.99        12.99        11.31 
TCGA-A2-A0YD TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A7-A0CG TCGA-A7-A0DB 
       18.08        11.77        10.98         8.81         5.46         4.60 
TCGA-A8-A07E TCGA-A8-A07G TCGA-A8-A07J TCGA-A8-A08O TCGA-A8-A08Z TCGA-A8-A09A 
       19.99        18.94        12.00        30.97        40.01         9.99 
TCGA-A8-A0A1 TCGA-A8-A0A2 TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-A8-A0AB TCGA-AN-A046 
       12.00        19.00        13.02        21.04        17.00         0.33 
TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0XL TCGA-AN-A0XS TCGA-AN-A0XV TCGA-AO-A03M 
        7.17         6.28         0.33         0.33         5.33        47.84 
TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A03U TCGA-AO-A0J9 TCGA-AO-A0JA TCGA-AO-A0JB 
       56.12        39.02        59.05        41.26        11.38        37.81 
TCGA-AO-A0JC TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JJ TCGA-AO-A126 TCGA-AO-A12A 
       50.86        11.64        14.76        49.71        93.70        90.54 
TCGA-AO-A12E TCGA-AO-A12G TCGA-AR-A0TT TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AN 
       57.27        41.59        55.20        51.22        48.82        43.69 
TCGA-AR-A1AO TCGA-AR-A1AP TCGA-AR-A1AU TCGA-AR-A1AV TCGA-AR-A1AX TCGA-B6-A0IE 
       43.53        39.95        46.32        42.58        36.26        65.69 
TCGA-B6-A0IH TCGA-B6-A0IP TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-B6-A0WS TCGA-B6-A0WY 
      112.37       110.93       140.48       157.41        97.48       113.75 
TCGA-B6-A0X7 TCGA-BH-A0AU TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B5 
       58.88        24.53        25.55        28.50        46.92        48.36 
TCGA-BH-A0BC TCGA-BH-A0BD TCGA-BH-A0BF TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BO 
       32.02        18.21        25.68        21.70        36.72        35.67 
TCGA-BH-A0BP TCGA-BH-A0BQ TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DI 
       48.69        27.16        48.13        31.17        23.44        22.13 
TCGA-BH-A0DK TCGA-BH-A0DO TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0DT 
       13.91        17.26        15.65         3.22         2.53        38.47 
TCGA-BH-A0DX TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0EI TCGA-BH-A0H5 TCGA-BH-A0HA 
       47.41        46.19        32.65        24.43        35.51        28.14 
TCGA-BH-A0HF TCGA-BH-A0HK TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0W4 TCGA-BH-A0W5 
       23.90         5.85        13.61        36.85         5.75        17.85 
TCGA-BH-A0W7 TCGA-BH-A18F TCGA-BH-A18I TCGA-BH-A18M TCGA-BH-A1EO TCGA-BH-A1ET 
       18.35         8.81         7.23        72.56        91.99        82.85 
TCGA-BH-A1EU TCGA-BH-A1EW TCGA-BH-A1F0 TCGA-C8-A1HI TCGA-D8-A141 TCGA-D8-A145 
       42.28        55.69        25.81         0.07         3.72         1.61 
TCGA-D8-A146 TCGA-E2-A108 TCGA-E2-A10F TCGA-E2-A14Z TCGA-E2-A15C TCGA-E2-A15E 
       11.31         4.08        11.84        17.03        16.31        17.00 
TCGA-E2-A15I TCGA-E2-A15K TCGA-E2-A15M TCGA-E2-A15P TCGA-E2-A1B1 TCGA-E2-A1B4 
       13.51         1.12         7.69        10.36        44.75        29.95 
TCGA-E2-A1B6 TCGA-E2-A1BC 
       11.11         9.76 

subtype1 subtype2 subtype3 
    0.07     0.07     0.07 
subtype1 subtype2 subtype3 
  211.53   223.40   157.41 
subtype1 subtype2 subtype3 
  21.880   23.080   26.485 
[1] "0.1 - 211.5 (21.9)" "0.1 - 223.4 (23.1)" "0.1 - 157.4 (26.5)"
  [1] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
  [7] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
 [13] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [19] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [25] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [31] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [37] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [43] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [49] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
 [55] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
 [61] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
 [67] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [73] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
 [79] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
 [85] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [97] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[103] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[127] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[151] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[157] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[175] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[181] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[187] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[193] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[199] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[211] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[217] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[223] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[235] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
[241] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[247] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[253] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[259] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[265] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[277] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[283] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[289] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[295] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[301] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[307] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[313] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[319] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[325] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[331] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[337] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[343] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[349] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[355] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[361] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[367] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[373] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[385] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[391] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[397] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[403] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[409] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[415] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[421] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[427] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[433] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[439] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[445] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[451] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[457] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[463] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[469] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[475] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[481] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[487] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[493] "subtype3" "subtype3" "subtype2"
  [1] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
  [7] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
 [13] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [19] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [25] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [31] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [37] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [43] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [49] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
 [55] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
 [61] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
 [67] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [73] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
 [79] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
 [85] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [97] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[103] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[127] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[151] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[157] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[175] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[181] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[187] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[193] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[199] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[211] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[217] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[223] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[235] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
[241] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[247] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[253] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[259] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[265] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[277] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[283] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[289] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[295] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[301] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[307] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[313] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[319] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[325] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[331] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[337] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[343] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[349] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[355] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[361] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[367] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[373] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[385] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[391] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[397] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[403] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[409] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[415] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[421] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[427] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[433] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[439] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[445] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[451] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[457] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[463] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[469] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[475] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[481] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[487] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[493] "subtype3" "subtype3" "subtype2"
  [1] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
  [7] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
 [13] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [19] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [25] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [31] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [37] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [43] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [49] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
 [55] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
 [61] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
 [67] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [73] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
 [79] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
 [85] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [97] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[103] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[127] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[151] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[157] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[175] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[181] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[187] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[193] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[199] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[211] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[217] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[223] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[235] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
[241] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[247] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[253] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[259] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[265] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[277] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[283] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[289] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[295] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[301] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[307] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[313] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[319] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[325] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[331] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[337] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[343] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[349] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[355] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[361] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[367] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[373] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[385] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[391] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[397] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[403] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[409] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[415] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[421] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[427] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[433] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[439] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[445] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[451] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[457] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[463] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[469] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[475] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[481] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[487] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[493] "subtype3" "subtype3" "subtype2"
D2V2, continuous
D2V3, binary
          cls
clus         0   1
  subtype1 127   0
  subtype2 259   5
  subtype3 135   1
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  127    0
  subtype2  259    5
  subtype3  135    1
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      127      259      135
  MALE          0        5        1
D2V4, binary
          cls
clus         0   1
  subtype1  44  83
  subtype2  65 199
  subtype3  39  97
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   44   83
  subtype2   65  199
  subtype3   39   97
     clus
vv    subtype1 subtype2 subtype3
  NO        44       65       39
  YES       83      199       97
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 123   3   1
  subtype2        0 245  10   9
  subtype3        2 129   1   4
D2V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3C NX
  subtype1 38       3      31 18  10   4   0    1  7   6  3   5   1  0
  subtype2 66       4      42 30  45  12   1   10 19  15  4   8   0  8
  subtype3 34       9      28 11  22   4   1    2  6   8  3   5   0  3
D2V6, multiclass
D2V7, continuous
D2V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1       8       11        0        53        26         13          2
  subtype2      17       18        3        83        64         43         12
  subtype3      17       12        3        49        21         21          1
          vv
clus       STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1          8        3         0       3
  subtype2          6       10         0       8
  subtype3          5        1         1       5
D2V9, multiclass

Clustering(3) Variable = CN_CNMF
D3V1, survival
          sevent
clus2        0   1
  subtype1 266  31
  subtype2  66   6
  subtype3 158  21
  subtype4 164  25
  subtype5  40  11
subtype1 subtype2 subtype3 subtype4 subtype5 
     297       72      179      189       51 
subtype1 subtype2 subtype3 subtype4 subtype5 
      31        6       21       25       11 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SG TCGA-A1-A0SH TCGA-A2-A04N TCGA-A2-A04Q TCGA-A2-A04V 
        8.52        14.24        47.24       103.66        41.92        63.12 
TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CL TCGA-A2-A0CP TCGA-A2-A0CQ TCGA-A2-A0D3 
       63.06        25.08        60.07        82.03        78.64        24.20 
TCGA-A2-A0EM TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0ER TCGA-A2-A0ES TCGA-A2-A0EW 
       90.64        82.68        71.70        62.53        32.91        25.32 
TCGA-A2-A0EX TCGA-A2-A0ST TCGA-A2-A0SU TCGA-A2-A0SY TCGA-A2-A0T1 TCGA-A2-A0T5 
       18.05        54.02        44.42        37.94        10.59        10.55 
TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YI 
       11.31        13.05        21.14        18.08         9.50        11.77 
TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1FZ TCGA-A2-A1G4 TCGA-A2-A1G6 TCGA-A2-A259 
       10.98         8.81        13.45        12.23         4.34        42.25 
TCGA-A2-A25A TCGA-A2-A25C TCGA-A2-A25F TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A7-A0CG 
       97.58         9.37         3.72        11.93        26.40         5.46 
TCGA-A7-A0CH TCGA-A7-A13G TCGA-A7-A26E TCGA-A7-A26F TCGA-A7-A26H TCGA-A7-A3IY 
        5.29         6.84        13.84         8.45         2.10         4.96 
TCGA-A7-A3IZ TCGA-A7-A3J0 TCGA-A7-A3J1 TCGA-A7-A3RF TCGA-A8-A06P TCGA-A8-A07E 
        4.87         2.50         2.47         1.78        13.02        19.99 
TCGA-A8-A07J TCGA-A8-A07S TCGA-A8-A082 TCGA-A8-A08A TCGA-A8-A08T TCGA-A8-A08Z 
       12.00         7.96        18.05         0.99        93.04        40.01 
TCGA-A8-A095 TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A09X TCGA-A8-A0A1 TCGA-A8-A0A7 
       41.95        19.00        15.02        14.01        12.00         0.99 
TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A23G TCGA-AC-A2B8 TCGA-AC-A2FB TCGA-AC-A2FF 
        0.95         2.37        10.82         1.45         1.45        55.40 
TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FO TCGA-AC-A2QI TCGA-AC-A2QJ TCGA-AC-A3BB 
       36.99        38.79        50.70         0.92         2.27         0.99 
TCGA-AC-A3HN TCGA-AC-A3TN TCGA-AN-A046 TCGA-AN-A0FF TCGA-AN-A0FN TCGA-AN-A0FS 
        0.69         1.12         0.33         4.60         7.17         6.28 
TCGA-AN-A0XO TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AN-A0XV TCGA-AO-A03U TCGA-AO-A0J5 
       12.33         0.33         0.33         5.33        59.05        24.16 
TCGA-AO-A0J8 TCGA-AO-A0JA TCGA-AO-A0JC TCGA-AO-A0JD TCGA-AO-A0JF TCGA-AO-A0JJ 
        9.11        11.38        50.86        59.61        11.64        49.71 
TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A128 TCGA-AO-A12B TCGA-AO-A12H TCGA-AO-A1KO 
       99.22        93.70        94.59        77.56        28.34        14.73 
TCGA-AQ-A1H3 TCGA-AR-A0TS TCGA-AR-A0TX TCGA-AR-A1AJ TCGA-AR-A1AL TCGA-AR-A1AO 
        4.54        37.41         0.49        52.73        48.82        43.53 
TCGA-AR-A1AQ TCGA-AR-A1AS TCGA-AR-A1AU TCGA-AR-A1AW TCGA-AR-A1AX TCGA-AR-A24M 
       43.04        40.83        46.32        35.24        36.26        65.42 
TCGA-AR-A24N TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A24X 
       68.19        65.65         0.85        53.26        50.96        48.16 
TCGA-AR-A252 TCGA-AR-A2LE TCGA-AR-A2LH TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
       40.64       128.65        20.22        40.01        17.06        20.81 
TCGA-AR-A2LQ TCGA-B6-A0I5 TCGA-B6-A0IC TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IP 
       16.96       149.56        50.70       126.12        84.59       110.93 
TCGA-B6-A0RI TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RQ TCGA-B6-A0RT TCGA-B6-A0RV 
      223.40        78.02       172.96       140.48        89.46       157.41 
TCGA-B6-A0WT TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A0X7 
      177.40       129.57       129.70        28.24        68.94        58.88 
TCGA-B6-A1KI TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B7 TCGA-BH-A0BD TCGA-BH-A0BM 
       48.10        28.50        46.92        56.98        18.21        36.72 
TCGA-BH-A0BO TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BZ TCGA-BH-A0C3 TCGA-BH-A0DE 
       35.67        27.16        53.92        49.05        48.13        31.17 
TCGA-BH-A0DG TCGA-BH-A0DH TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DO TCGA-BH-A0DT 
       23.44        38.01        22.13        13.91        17.26        38.47 
TCGA-BH-A0DV TCGA-BH-A0DX TCGA-BH-A0DZ TCGA-BH-A0E1 TCGA-BH-A0E2 TCGA-BH-A0E7 
       45.17        47.41        16.27        15.68        12.36        44.78 
TCGA-BH-A0EA TCGA-BH-A0EB TCGA-BH-A0EE TCGA-BH-A0EI TCGA-BH-A0H3 TCGA-BH-A0H5 
       32.65        24.49        31.00        24.43        37.78        35.51 
TCGA-BH-A0H6 TCGA-BH-A0HA TCGA-BH-A0HI TCGA-BH-A0HK TCGA-BH-A0HO TCGA-BH-A0HP 
       24.56        28.14        20.35         5.85         2.50        13.61 
TCGA-BH-A0RX TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A0W7 TCGA-BH-A18G TCGA-BH-A18J 
        5.59         5.75        17.85        18.35         2.01        20.09 
TCGA-BH-A18M TCGA-BH-A18P TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EX 
       72.56        30.28       113.82        82.85        42.28        49.58 
TCGA-BH-A1F0 TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FG TCGA-BH-A1FH TCGA-BH-A1FJ 
       25.81       120.62        74.73       122.89        36.92        63.35 
TCGA-BH-A1FL TCGA-BH-A1FR TCGA-BH-A1FU TCGA-BH-A28O TCGA-C8-A137 TCGA-C8-A1HI 
       55.00       144.59        72.07        10.62         0.10         0.07 
TCGA-C8-A26V TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A275 TCGA-D8-A141 TCGA-D8-A145 
        0.30         0.36         0.43         0.03         3.72         1.61 
TCGA-D8-A146 TCGA-D8-A1J8 TCGA-D8-A1JE TCGA-D8-A1JH TCGA-D8-A1JN TCGA-D8-A1JS 
       11.31         8.42         1.87         9.34         7.13         3.45 
TCGA-D8-A1JU TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XM 
        3.48         2.79         8.94         6.61         2.66         7.17 
TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A27E TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L 
        4.90         4.80         5.98         6.08         3.88         4.11 
TCGA-D8-A27P TCGA-D8-A27T TCGA-E2-A108 TCGA-E2-A10A TCGA-E2-A10E TCGA-E2-A10F 
        0.72         4.44         4.08        11.57        13.74        11.84 
TCGA-E2-A14N TCGA-E2-A14Q TCGA-E2-A14U TCGA-E2-A14Y TCGA-E2-A155 TCGA-E2-A156 
       44.38        32.02        27.55        22.62        18.18        15.81 
TCGA-E2-A15C TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15M 
       16.31        13.51        15.22         1.12        10.88         7.69 
TCGA-E2-A15P TCGA-E2-A1B1 TCGA-E2-A1B4 TCGA-E2-A1B5 TCGA-E2-A1B6 TCGA-E2-A1BC 
       10.36        44.75        29.95        25.45        11.11         9.76 
TCGA-E2-A1IF TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IU TCGA-E2-A1L6 
       31.43        23.84        17.03         0.46         4.18        43.13 
TCGA-E2-A1L9 TCGA-E2-A1LB TCGA-E2-A1LE TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E9-A1R3 
       12.76        31.96        28.90         5.49         7.13         2.10 
TCGA-E9-A1R4 TCGA-E9-A1RA TCGA-E9-A1RD TCGA-E9-A1RI TCGA-E9-A227 TCGA-E9-A243 
        0.95         0.95         0.66         1.58         0.79         1.41 
TCGA-E9-A245 TCGA-E9-A248 TCGA-E9-A24A TCGA-E9-A2JT TCGA-EW-A1IX TCGA-EW-A1IY 
        0.82         0.69         0.33         0.76        35.57         8.48 
TCGA-EW-A1IZ TCGA-EW-A1J2 TCGA-EW-A1OX TCGA-EW-A1P1 TCGA-EW-A1P6 TCGA-EW-A1P7 
        8.55         4.57        18.48        30.21        10.26        20.88 
TCGA-EW-A1PE TCGA-EW-A1PG TCGA-EW-A2FR TCGA-GM-A2D9 TCGA-GM-A2DA TCGA-GM-A2DB 
        3.48        28.77        36.82        59.57       194.27        53.10 
TCGA-GM-A2DD TCGA-GM-A2DH TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DM 
       43.04        42.28        61.91        62.33        90.81        76.64 
TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NY 
       77.33        53.33        24.43 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SI TCGA-A2-A0CS TCGA-A2-A0CV 
       14.37        43.40        48.10        20.84        75.55        61.48 
TCGA-A7-A0DB TCGA-A8-A06Y TCGA-A8-A07F TCGA-A8-A07Z TCGA-A8-A084 TCGA-A8-A08C 
        4.60        26.01        18.94        28.04        15.06        19.96 
TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09E 
       17.03        17.92         9.99        12.00         1.02        30.97 
TCGA-A8-A0A2 TCGA-A8-A0A6 TCGA-A8-A0AB TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A0FK 
       19.00        21.04        17.00         0.33         0.33         6.97 
TCGA-AN-A0XP TCGA-AO-A03N TCGA-AO-A0J7 TCGA-AO-A0J9 TCGA-AO-A12A TCGA-AR-A0TR 
        0.30        54.08         8.55        41.26        90.54         5.26 
TCGA-AR-A1AV TCGA-AR-A24K TCGA-B6-A0IB TCGA-B6-A0IH TCGA-B6-A0RH TCGA-B6-A0RP 
       42.58        50.89       129.57       112.37       188.98       102.77 
TCGA-BH-A0B5 TCGA-BH-A0BA TCGA-BH-A0BJ TCGA-BH-A0BV TCGA-BH-A0C1 TCGA-BH-A0DP 
       48.36        37.22        21.70        49.94        43.99        15.65 
TCGA-BH-A0E9 TCGA-BH-A0GZ TCGA-BH-A0HQ TCGA-BH-A0HU TCGA-BH-A18F TCGA-BH-A18K 
       46.19        10.78        36.85        12.89         8.81        90.81 
TCGA-BH-A1EV TCGA-BH-A202 TCGA-BH-A28Q TCGA-C8-A274 TCGA-D8-A1JA TCGA-D8-A1XG 
       12.00         0.72         6.44         0.03         0.59         6.44 
TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A27V TCGA-E2-A107 TCGA-E2-A10B TCGA-E2-A14O 
        7.96         5.52         2.40        25.08        24.59        38.53 
TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A15G TCGA-E2-A1BD TCGA-E2-A1L8 TCGA-E9-A1R5 
       19.27        10.68        10.36        10.42        33.37         1.38 
TCGA-E9-A1RC TCGA-E9-A249 TCGA-E9-A3HO TCGA-EW-A1P3 TCGA-EW-A1PC TCGA-GM-A3NW 
       40.37         0.92         0.62        32.45         6.12        98.04 

$subtype3
TCGA-A1-A0SJ TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04R TCGA-A2-A04X 
       14.01         7.96        39.32        18.18        77.72        44.35 
TCGA-A2-A0CT TCGA-A2-A0D4 TCGA-A2-A0ET TCGA-A2-A0EV TCGA-A2-A0SV TCGA-A2-A0T3 
       63.02        16.31        26.53        17.92        27.12        14.99 
TCGA-A2-A0T4 TCGA-A2-A0YG TCGA-A2-A0YT TCGA-A2-A1FW TCGA-A2-A1FX TCGA-A2-A25E 
       12.99        13.28        23.77         7.27        30.74        82.55 
TCGA-A7-A0CD TCGA-A7-A0CJ TCGA-A7-A26J TCGA-A7-A2KD TCGA-A8-A06O TCGA-A8-A06Q 
        5.59         6.18         2.20         5.95        13.02         1.02 
TCGA-A8-A06R TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06Z TCGA-A8-A076 TCGA-A8-A079 
       17.95        41.06        29.00         1.02        53.95         9.01 
TCGA-A8-A07B TCGA-A8-A07G TCGA-A8-A07I TCGA-A8-A07P TCGA-A8-A07W TCGA-A8-A085 
       33.01        18.94        14.01        10.98         9.99        36.95 
TCGA-A8-A086 TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08I TCGA-A8-A08J TCGA-A8-A08O 
       13.02        18.05        19.92        12.00        37.05        30.97 
TCGA-A8-A08P TCGA-A8-A08S TCGA-A8-A097 TCGA-A8-A09A TCGA-A8-A09I TCGA-A8-A09M 
       30.97        19.07        12.00         9.99        33.07        15.02 
TCGA-A8-A09R TCGA-A8-A09W TCGA-A8-A0A4 TCGA-A8-A0A9 TCGA-A8-A0AD TCGA-AC-A23H 
        8.98         0.99        13.02        13.02        38.04         2.66 
TCGA-AC-A2BM TCGA-AC-A2FM TCGA-AC-A3OD TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A 
       38.20        26.04         1.15         0.23         0.62         2.93 
TCGA-AN-A0AJ TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0XL TCGA-AN-A0XW TCGA-AO-A03L 
        7.99         0.33         0.36         0.33         5.59        80.28 
TCGA-AO-A03P TCGA-AO-A03T TCGA-AO-A0J2 TCGA-AO-A0J3 TCGA-AO-A0JE TCGA-AO-A0JG 
       84.69        39.02        19.23         9.93        64.60        14.76 
TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A12E TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AO-A1KT 
       38.53        60.03        57.27        49.94         0.53        17.79 
TCGA-AQ-A04H TCGA-AQ-A0Y5 TCGA-AQ-A1H2 TCGA-AR-A0TQ TCGA-AR-A0TZ TCGA-AR-A0U2 
       14.43         5.62         7.56        49.32        43.17        83.87 
TCGA-AR-A1AK TCGA-AR-A1AP TCGA-AR-A24L TCGA-AR-A24R TCGA-AR-A24V TCGA-AR-A24Z 
       51.22        39.95        73.02        57.37        54.18        51.75 
TCGA-AR-A250 TCGA-AR-A254 TCGA-AR-A255 TCGA-AR-A2LK TCGA-AR-A2LL TCGA-B6-A0I9 
       56.12        39.85        34.78        42.84         7.33        12.13 
TCGA-B6-A0IG TCGA-B6-A0RG TCGA-B6-A0RL TCGA-B6-A0RO TCGA-B6-A0WV TCGA-B6-A0WY 
      146.50        68.45        81.17       162.02        79.63       113.75 
TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0B4 TCGA-BH-A0BC TCGA-BH-A0C7 TCGA-BH-A0DD 
      109.48        24.53        39.16        32.02        42.90        45.80 
TCGA-BH-A0DQ TCGA-BH-A0H7 TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 
        3.22        23.05        51.29        27.25        28.50         5.92 
TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18R TCGA-BH-A18U TCGA-BH-A1EN TCGA-BH-A1EW 
       26.66        37.74        37.51        51.39        67.46        55.69 
TCGA-BH-A1F2 TCGA-BH-A1F8 TCGA-BH-A1FM TCGA-C8-A138 TCGA-C8-A1HK TCGA-C8-A1HL 
       31.53        24.62        45.63         0.23         0.23         0.07 
TCGA-C8-A1HN TCGA-C8-A26Z TCGA-C8-A273 TCGA-D8-A13Y TCGA-D8-A1J9 TCGA-D8-A1JC 
        0.07         0.13         0.20         8.68         8.15         5.85 
TCGA-D8-A1JD TCGA-D8-A1JI TCGA-D8-A1JT TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XS 
        8.98         0.69         4.04        12.49         9.01         0.59 
TCGA-D8-A1XT TCGA-D8-A1XY TCGA-D8-A1Y0 TCGA-D8-A27G TCGA-D8-A27N TCGA-D8-A27R 
        6.35         2.66         5.46         6.87         4.77         2.96 
TCGA-D8-A27W TCGA-E2-A105 TCGA-E2-A109 TCGA-E2-A14P TCGA-E2-A14S TCGA-E2-A14V 
        0.49        38.24        38.53        16.01        27.42        24.59 
TCGA-E2-A14W TCGA-E2-A152 TCGA-E2-A15A TCGA-E2-A15E TCGA-E2-A15H TCGA-E2-A15O 
       27.39        19.33        16.50        17.00         1.38        12.99 
TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IH TCGA-E2-A1LA TCGA-E9-A1R2 TCGA-E9-A1R6 
       32.32        24.82        21.63        15.22         0.62         2.76 
TCGA-E9-A1R7 TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A247 TCGA-E9-A295 
        1.12         1.55         1.25         1.15         0.39         0.69 
TCGA-E9-A2JS TCGA-EW-A1IW TCGA-EW-A1J3 TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OY 
        0.43         8.28         8.28         7.46        19.56        19.50 
TCGA-EW-A1P5 TCGA-EW-A1PD TCGA-EW-A2FS TCGA-EW-A2FW TCGA-GI-A2C8 
       12.00         5.72        38.56         6.25         6.97 

$subtype4
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U 
       31.79        28.01        19.17        17.98        64.11        22.03 
TCGA-A2-A0CM TCGA-A2-A0CW TCGA-A2-A0CX TCGA-A2-A0D0 TCGA-A2-A0D2 TCGA-A2-A0EQ 
       24.79        57.53        42.84        21.14        25.02        67.50 
TCGA-A2-A0EY TCGA-A2-A0SW TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YE 
       15.95        44.84        42.35        11.08         7.96         8.28 
TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A2-A25B TCGA-A7-A0CE TCGA-A7-A0D9 
       10.72        21.73        12.20         8.48         8.32         5.23 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26G TCGA-A7-A26I TCGA-A8-A06X 
       12.26         8.78         9.44         6.87         4.01        31.00 
TCGA-A8-A075 TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08B TCGA-A8-A08L 
       17.00         9.99         8.98         9.96        23.08         9.99 
TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A09D TCGA-A8-A09K TCGA-A8-A09N TCGA-A8-A09Q 
        0.99        33.99        13.02        29.95         1.02        25.02 
TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AK TCGA-AN-A0AL 
       38.53         1.02         1.78         1.71         7.33         6.48 
TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AS TCGA-AN-A0AT TCGA-AN-A0FD TCGA-AN-A0FJ 
        0.16         0.30         0.30         0.33         6.41         7.92 
TCGA-AN-A0FL TCGA-AN-A0FT TCGA-AN-A0FX TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XN 
        7.56         6.02         0.33         0.33         0.33         0.33 
TCGA-AN-A0XT TCGA-AN-A0XU TCGA-AO-A03M TCGA-AO-A03O TCGA-AO-A03V TCGA-AO-A0J4 
        0.33         0.33        47.84        81.63        29.13         9.67 
TCGA-AO-A0J6 TCGA-AO-A0JB TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F 
       25.48        37.81       102.54        96.10        64.04        48.36 
TCGA-AO-A12G TCGA-AO-A1KR TCGA-AQ-A04J TCGA-AQ-A04L TCGA-AR-A0TP TCGA-AR-A0TT 
       41.59        70.36         5.23       109.94        78.64        55.20 
TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U4 
       29.72        24.30        55.86         0.26         6.08        53.49 
TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AN TCGA-AR-A1AR TCGA-AR-A1AY TCGA-AR-A24H 
       75.55        61.84        43.69        17.19        20.19       109.58 
TCGA-AR-A24Q TCGA-AR-A24S TCGA-AR-A24U TCGA-AR-A251 TCGA-AR-A256 TCGA-AR-A2LR 
       66.02        62.07        53.36        45.14        93.83        20.38 
TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0IE TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IO 
       77.62       125.79        65.69       176.98        18.77       110.14 
TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RU TCGA-B6-A1KF TCGA-BH-A0AV 
      127.27       211.53       100.67       131.21       101.52        38.79 
TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B6 TCGA-BH-A0B9 TCGA-BH-A0BF TCGA-BH-A0BG 
       20.45        39.55        56.94        51.68        25.68        24.85 
TCGA-BH-A0BL TCGA-BH-A0BP TCGA-BH-A0BR TCGA-BH-A0BW TCGA-BH-A0C0 TCGA-BH-A0E0 
       44.02        48.69        53.65        11.67        41.75         4.37 
TCGA-BH-A0E6 TCGA-BH-A0GY TCGA-BH-A0H9 TCGA-BH-A0WA TCGA-BH-A18Q TCGA-BH-A18T 
        9.60        30.15        41.00        12.23        55.63         7.36 
TCGA-BH-A18V TCGA-BH-A1EY TCGA-BH-A1F6 TCGA-BH-A1FN TCGA-BH-A203 TCGA-BH-A208 
       51.12        17.69        97.48        72.07        38.60        57.83 
TCGA-BH-A209 TCGA-C8-A1HJ TCGA-C8-A1HM TCGA-C8-A26W TCGA-C8-A278 TCGA-C8-A27B 
      130.16         0.16         0.20         0.23         0.03         0.99 
TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1JF TCGA-D8-A1JG 
        6.90         2.01         5.65         0.07         3.16         6.15 
TCGA-D8-A1JJ TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1JM TCGA-D8-A1JP TCGA-D8-A1X5 
        9.01         3.58         8.71         7.82         5.49         5.62 
TCGA-D8-A1XJ TCGA-D8-A1XK TCGA-D8-A1XL TCGA-D8-A1XQ TCGA-D8-A1XW TCGA-D8-A1XZ 
       11.57        10.72        10.49         5.82         3.85         3.95 
TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Z 
        7.46         4.60         4.73        27.78        22.75        17.03 
TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1II TCGA-E2-A1IO 
       19.43        14.79        16.93        64.57        27.95        14.73 
TCGA-E2-A1L7 TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LL TCGA-E2-A2P5 TCGA-E9-A1RH 
       20.81        94.52        90.41        33.34        10.72         0.46 
TCGA-E9-A226 TCGA-E9-A244 TCGA-EW-A1J1 TCGA-EW-A1OV TCGA-EW-A1OW TCGA-EW-A1OZ 
        0.53         0.66         9.27        17.16        15.22        30.94 
TCGA-EW-A1P4 TCGA-EW-A1P8 TCGA-EW-A1PA TCGA-EW-A1PB TCGA-EW-A1PF TCGA-EW-A1PH 
       16.47         7.86         8.78        19.99         4.57         4.57 
TCGA-EW-A2FV TCGA-GI-A2C9 TCGA-GM-A2DF 
        7.82        23.11        42.71 

$subtype5
TCGA-A2-A0CU TCGA-A2-A0D1 TCGA-A2-A0EU TCGA-A2-A0YH TCGA-A2-A1FV TCGA-A2-A1G0 
        5.16        25.84        24.10        12.46        15.12        12.49 
TCGA-A2-A25D TCGA-A7-A13F TCGA-A8-A07L TCGA-A8-A091 TCGA-AO-A03R TCGA-AO-A0JL 
        7.99         6.44        17.00        19.07        56.12        43.36 
TCGA-AO-A1KP TCGA-AR-A0U3 TCGA-B6-A0IA TCGA-B6-A0WS TCGA-B6-A0WW TCGA-B6-A0WX 
       82.62        74.40       220.87        97.48        17.95        21.47 
TCGA-B6-A0X1 TCGA-B6-A1KC TCGA-B6-A2IU TCGA-BH-A0AY TCGA-BH-A0BT TCGA-BH-A0DL 
      186.44        43.59       159.12        25.55        45.57        48.23 
TCGA-BH-A0DS TCGA-BH-A0H0 TCGA-BH-A0HB TCGA-BH-A18I TCGA-BH-A18S TCGA-BH-A1EO 
        2.53        15.16        26.50         7.23        66.05        91.99 
TCGA-BH-A1F5 TCGA-BH-A1FC TCGA-BH-A1FD TCGA-BH-A201 TCGA-BH-A204 TCGA-C8-A27A 
       89.16       114.12        33.14         6.87        83.31        12.20 
TCGA-D8-A1X6 TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A1Y3 
        7.76         5.10         6.48         3.78         2.37         4.08 
TCGA-E2-A10C TCGA-E2-A15R TCGA-E2-A1B0 TCGA-E2-A1IN TCGA-E2-A1LG TCGA-E2-A1LK 
       28.04        10.85        41.79        12.89        11.51         8.75 
TCGA-E9-A1RB TCGA-EW-A1P0 TCGA-GM-A2DC 
        0.69        36.85        53.52 

subtype1 subtype2 subtype3 subtype4 subtype5 
    0.03     0.03     0.07     0.03     0.69 
subtype1 subtype2 subtype3 subtype4 subtype5 
  223.40   188.98   162.02   211.53   220.87 
subtype1 subtype2 subtype3 subtype4 subtype5 
   20.09    18.97    16.50    17.69    21.47 
[1] "0.0 - 223.4 (20.1)" "0.0 - 189.0 (19.0)" "0.1 - 162.0 (16.5)"
[4] "0.0 - 211.5 (17.7)" "0.7 - 220.9 (21.5)"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
  [7] "subtype2" "subtype3" "subtype4" "subtype3" "subtype3" "subtype4"
 [13] "subtype4" "subtype3" "subtype1" "subtype4" "subtype1" "subtype3"
 [19] "subtype4" "subtype4" "subtype1" "subtype1" "subtype3" "subtype1"
 [25] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype3"
 [31] "subtype5" "subtype2" "subtype4" "subtype4" "subtype4" "subtype5"
 [37] "subtype4" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
 [43] "subtype4" "subtype1" "subtype1" "subtype3" "subtype5" "subtype3"
 [49] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype3"
 [55] "subtype4" "subtype4" "subtype1" "subtype4" "subtype1" "subtype4"
 [61] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [67] "subtype1" "subtype4" "subtype1" "subtype3" "subtype5" "subtype1"
 [73] "subtype4" "subtype1" "subtype1" "subtype4" "subtype3" "subtype5"
 [79] "subtype3" "subtype3" "subtype1" "subtype5" "subtype4" "subtype1"
 [85] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype5"
 [91] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype4"
 [97] "subtype1" "subtype1" "subtype3" "subtype4" "subtype4" "subtype2"
[103] "subtype4" "subtype4" "subtype5" "subtype1" "subtype1" "subtype1"
[109] "subtype4" "subtype1" "subtype4" "subtype3" "subtype3" "subtype1"
[115] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[121] "subtype3" "subtype3" "subtype3" "subtype3" "subtype4" "subtype2"
[127] "subtype3" "subtype4" "subtype3" "subtype3" "subtype3" "subtype1"
[133] "subtype2" "subtype3" "subtype3" "subtype1" "subtype5" "subtype4"
[139] "subtype3" "subtype4" "subtype1" "subtype4" "subtype3" "subtype2"
[145] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype4"
[151] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype4"
[157] "subtype3" "subtype3" "subtype4" "subtype3" "subtype1" "subtype4"
[163] "subtype1" "subtype5" "subtype2" "subtype2" "subtype1" "subtype3"
[169] "subtype2" "subtype3" "subtype2" "subtype2" "subtype4" "subtype2"
[175] "subtype3" "subtype4" "subtype3" "subtype4" "subtype4" "subtype3"
[181] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[187] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
[199] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[205] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype1"
[211] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[217] "subtype3" "subtype3" "subtype4" "subtype4" "subtype3" "subtype4"
[223] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[229] "subtype1" "subtype4" "subtype2" "subtype4" "subtype1" "subtype1"
[235] "subtype4" "subtype3" "subtype3" "subtype4" "subtype4" "subtype4"
[241] "subtype3" "subtype4" "subtype1" "subtype2" "subtype1" "subtype1"
[247] "subtype4" "subtype4" "subtype1" "subtype3" "subtype3" "subtype4"
[253] "subtype2" "subtype4" "subtype3" "subtype5" "subtype3" "subtype1"
[259] "subtype4" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[265] "subtype2" "subtype1" "subtype2" "subtype1" "subtype4" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[277] "subtype5" "subtype3" "subtype4" "subtype1" "subtype1" "subtype1"
[283] "subtype4" "subtype2" "subtype1" "subtype4" "subtype3" "subtype4"
[289] "subtype4" "subtype1" "subtype1" "subtype5" "subtype3" "subtype4"
[295] "subtype3" "subtype3" "subtype3" "subtype4" "subtype4" "subtype3"
[301] "subtype3" "subtype1" "subtype4" "subtype3" "subtype2" "subtype1"
[307] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype3"
[313] "subtype4" "subtype4" "subtype3" "subtype5" "subtype4" "subtype4"
[319] "subtype4" "subtype1" "subtype3" "subtype1" "subtype4" "subtype1"
[325] "subtype3" "subtype1" "subtype4" "subtype1" "subtype1" "subtype2"
[331] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype3"
[337] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype3"
[343] "subtype4" "subtype1" "subtype4" "subtype3" "subtype1" "subtype1"
[349] "subtype3" "subtype3" "subtype4" "subtype1" "subtype3" "subtype3"
[355] "subtype4" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype4"
[367] "subtype1" "subtype3" "subtype5" "subtype2" "subtype1" "subtype4"
[373] "subtype3" "subtype2" "subtype4" "subtype4" "subtype1" "subtype1"
[379] "subtype4" "subtype1" "subtype4" "subtype4" "subtype3" "subtype2"
[385] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[391] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype5"
[397] "subtype1" "subtype3" "subtype5" "subtype5" "subtype3" "subtype1"
[403] "subtype1" "subtype5" "subtype1" "subtype1" "subtype1" "subtype5"
[409] "subtype4" "subtype1" "subtype3" "subtype5" "subtype3" "subtype4"
[415] "subtype4" "subtype5" "subtype1" "subtype1" "subtype4" "subtype3"
[421] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype3"
[427] "subtype1" "subtype4" "subtype4" "subtype2" "subtype4" "subtype1"
[433] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype5"
[439] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype1"
[445] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[451] "subtype1" "subtype5" "subtype1" "subtype2" "subtype3" "subtype5"
[457] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
[463] "subtype1" "subtype4" "subtype1" "subtype2" "subtype1" "subtype1"
[469] "subtype1" "subtype1" "subtype4" "subtype2" "subtype5" "subtype1"
[475] "subtype1" "subtype1" "subtype3" "subtype4" "subtype1" "subtype5"
[481] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[487] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[493] "subtype1" "subtype1" "subtype4" "subtype2" "subtype1" "subtype5"
[499] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[505] "subtype4" "subtype3" "subtype5" "subtype4" "subtype3" "subtype4"
[511] "subtype3" "subtype5" "subtype1" "subtype1" "subtype1" "subtype2"
[517] "subtype3" "subtype1" "subtype4" "subtype1" "subtype3" "subtype5"
[523] "subtype4" "subtype3" "subtype1" "subtype5" "subtype5" "subtype1"
[529] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype4"
[535] "subtype1" "subtype1" "subtype5" "subtype2" "subtype4" "subtype5"
[541] "subtype4" "subtype4" "subtype1" "subtype2" "subtype1" "subtype3"
[547] "subtype1" "subtype4" "subtype3" "subtype3" "subtype4" "subtype3"
[553] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype3"
[559] "subtype2" "subtype1" "subtype4" "subtype5" "subtype4" "subtype3"
[565] "subtype4" "subtype1" "subtype4" "subtype4" "subtype1" "subtype1"
[571] "subtype4" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[577] "subtype1" "subtype4" "subtype4" "subtype1" "subtype3" "subtype4"
[583] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype1"
[589] "subtype3" "subtype1" "subtype4" "subtype5" "subtype1" "subtype1"
[595] "subtype3" "subtype3" "subtype1" "subtype1" "subtype5" "subtype5"
[601] "subtype2" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
[607] "subtype4" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[613] "subtype4" "subtype3" "subtype4" "subtype3" "subtype5" "subtype5"
[619] "subtype5" "subtype1" "subtype4" "subtype3" "subtype4" "subtype1"
[625] "subtype1" "subtype1" "subtype4" "subtype3" "subtype1" "subtype3"
[631] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[637] "subtype3" "subtype1" "subtype2" "subtype5" "subtype1" "subtype1"
[643] "subtype1" "subtype2" "subtype3" "subtype1" "subtype4" "subtype3"
[649] "subtype1" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[655] "subtype4" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[661] "subtype4" "subtype4" "subtype3" "subtype1" "subtype3" "subtype2"
[667] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[673] "subtype3" "subtype1" "subtype5" "subtype4" "subtype5" "subtype1"
[679] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[685] "subtype1" "subtype3" "subtype3" "subtype4" "subtype1" "subtype1"
[691] "subtype1" "subtype5" "subtype4" "subtype1" "subtype1" "subtype4"
[697] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype5"
[703] "subtype4" "subtype4" "subtype5" "subtype4" "subtype4" "subtype1"
[709] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[715] "subtype3" "subtype1" "subtype5" "subtype2" "subtype1" "subtype3"
[721] "subtype3" "subtype3" "subtype4" "subtype1" "subtype4" "subtype1"
[727] "subtype1" "subtype4" "subtype1" "subtype3" "subtype1" "subtype2"
[733] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[739] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype3"
[745] "subtype3" "subtype3" "subtype4" "subtype4" "subtype1" "subtype3"
[751] "subtype4" "subtype5" "subtype1" "subtype2" "subtype4" "subtype3"
[757] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype2"
[763] "subtype3" "subtype1" "subtype4" "subtype1" "subtype4" "subtype1"
[769] "subtype3" "subtype4" "subtype3" "subtype3" "subtype4" "subtype1"
[775] "subtype1" "subtype1" "subtype5" "subtype1" "subtype4" "subtype1"
[781] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[787] "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
  [7] "subtype2" "subtype3" "subtype4" "subtype3" "subtype3" "subtype4"
 [13] "subtype4" "subtype3" "subtype1" "subtype4" "subtype1" "subtype3"
 [19] "subtype4" "subtype4" "subtype1" "subtype1" "subtype3" "subtype1"
 [25] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype3"
 [31] "subtype5" "subtype2" "subtype4" "subtype4" "subtype4" "subtype5"
 [37] "subtype4" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
 [43] "subtype4" "subtype1" "subtype1" "subtype3" "subtype5" "subtype3"
 [49] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype3"
 [55] "subtype4" "subtype4" "subtype1" "subtype4" "subtype1" "subtype4"
 [61] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [67] "subtype1" "subtype4" "subtype1" "subtype3" "subtype5" "subtype1"
 [73] "subtype4" "subtype1" "subtype1" "subtype4" "subtype3" "subtype5"
 [79] "subtype3" "subtype3" "subtype1" "subtype5" "subtype4" "subtype1"
 [85] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype5"
 [91] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype4"
 [97] "subtype1" "subtype1" "subtype3" "subtype4" "subtype4" "subtype2"
[103] "subtype4" "subtype4" "subtype5" "subtype1" "subtype1" "subtype1"
[109] "subtype4" "subtype1" "subtype4" "subtype3" "subtype3" "subtype1"
[115] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[121] "subtype3" "subtype3" "subtype3" "subtype3" "subtype4" "subtype2"
[127] "subtype3" "subtype4" "subtype3" "subtype3" "subtype3" "subtype1"
[133] "subtype2" "subtype3" "subtype3" "subtype1" "subtype5" "subtype4"
[139] "subtype3" "subtype4" "subtype1" "subtype4" "subtype3" "subtype2"
[145] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype4"
[151] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype4"
[157] "subtype3" "subtype3" "subtype4" "subtype3" "subtype1" "subtype4"
[163] "subtype1" "subtype5" "subtype2" "subtype2" "subtype1" "subtype3"
[169] "subtype2" "subtype3" "subtype2" "subtype2" "subtype4" "subtype2"
[175] "subtype3" "subtype4" "subtype3" "subtype4" "subtype4" "subtype3"
[181] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[187] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
[199] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[205] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype1"
[211] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[217] "subtype3" "subtype3" "subtype4" "subtype4" "subtype3" "subtype4"
[223] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[229] "subtype1" "subtype4" "subtype2" "subtype4" "subtype1" "subtype1"
[235] "subtype4" "subtype3" "subtype3" "subtype4" "subtype4" "subtype4"
[241] "subtype3" "subtype4" "subtype1" "subtype2" "subtype1" "subtype1"
[247] "subtype4" "subtype4" "subtype1" "subtype3" "subtype3" "subtype4"
[253] "subtype2" "subtype4" "subtype3" "subtype5" "subtype3" "subtype1"
[259] "subtype4" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[265] "subtype2" "subtype1" "subtype2" "subtype1" "subtype4" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[277] "subtype5" "subtype3" "subtype4" "subtype1" "subtype1" "subtype1"
[283] "subtype4" "subtype2" "subtype1" "subtype4" "subtype3" "subtype4"
[289] "subtype4" "subtype1" "subtype1" "subtype5" "subtype3" "subtype4"
[295] "subtype3" "subtype3" "subtype3" "subtype4" "subtype4" "subtype3"
[301] "subtype3" "subtype1" "subtype4" "subtype3" "subtype2" "subtype1"
[307] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype3"
[313] "subtype4" "subtype4" "subtype3" "subtype5" "subtype4" "subtype4"
[319] "subtype4" "subtype1" "subtype3" "subtype1" "subtype4" "subtype1"
[325] "subtype3" "subtype1" "subtype4" "subtype1" "subtype1" "subtype2"
[331] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype3"
[337] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype3"
[343] "subtype4" "subtype1" "subtype4" "subtype3" "subtype1" "subtype1"
[349] "subtype3" "subtype3" "subtype4" "subtype1" "subtype3" "subtype3"
[355] "subtype4" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype4"
[367] "subtype1" "subtype3" "subtype5" "subtype2" "subtype1" "subtype4"
[373] "subtype3" "subtype2" "subtype4" "subtype4" "subtype1" "subtype1"
[379] "subtype4" "subtype1" "subtype4" "subtype4" "subtype3" "subtype2"
[385] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[391] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype5"
[397] "subtype1" "subtype3" "subtype5" "subtype5" "subtype3" "subtype1"
[403] "subtype1" "subtype5" "subtype1" "subtype1" "subtype1" "subtype5"
[409] "subtype4" "subtype1" "subtype3" "subtype5" "subtype3" "subtype4"
[415] "subtype4" "subtype5" "subtype1" "subtype1" "subtype4" "subtype3"
[421] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype3"
[427] "subtype1" "subtype4" "subtype4" "subtype2" "subtype4" "subtype1"
[433] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype5"
[439] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype1"
[445] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[451] "subtype1" "subtype5" "subtype1" "subtype2" "subtype3" "subtype5"
[457] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
[463] "subtype1" "subtype4" "subtype1" "subtype2" "subtype1" "subtype1"
[469] "subtype1" "subtype1" "subtype4" "subtype2" "subtype5" "subtype1"
[475] "subtype1" "subtype1" "subtype3" "subtype4" "subtype1" "subtype5"
[481] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[487] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[493] "subtype1" "subtype1" "subtype4" "subtype2" "subtype1" "subtype5"
[499] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[505] "subtype4" "subtype3" "subtype5" "subtype4" "subtype3" "subtype4"
[511] "subtype3" "subtype5" "subtype1" "subtype1" "subtype1" "subtype2"
[517] "subtype3" "subtype1" "subtype4" "subtype1" "subtype3" "subtype5"
[523] "subtype4" "subtype3" "subtype1" "subtype5" "subtype5" "subtype1"
[529] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype4"
[535] "subtype1" "subtype1" "subtype5" "subtype2" "subtype4" "subtype5"
[541] "subtype4" "subtype4" "subtype1" "subtype2" "subtype1" "subtype3"
[547] "subtype1" "subtype4" "subtype3" "subtype3" "subtype4" "subtype3"
[553] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype3"
[559] "subtype2" "subtype1" "subtype4" "subtype5" "subtype4" "subtype3"
[565] "subtype4" "subtype1" "subtype4" "subtype4" "subtype1" "subtype1"
[571] "subtype4" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[577] "subtype1" "subtype4" "subtype4" "subtype1" "subtype3" "subtype4"
[583] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype1"
[589] "subtype3" "subtype1" "subtype4" "subtype5" "subtype1" "subtype1"
[595] "subtype3" "subtype3" "subtype1" "subtype1" "subtype5" "subtype5"
[601] "subtype2" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
[607] "subtype4" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[613] "subtype4" "subtype3" "subtype4" "subtype3" "subtype5" "subtype5"
[619] "subtype5" "subtype1" "subtype4" "subtype3" "subtype4" "subtype1"
[625] "subtype1" "subtype1" "subtype4" "subtype3" "subtype1" "subtype3"
[631] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[637] "subtype3" "subtype1" "subtype2" "subtype5" "subtype1" "subtype1"
[643] "subtype1" "subtype2" "subtype3" "subtype1" "subtype4" "subtype3"
[649] "subtype1" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[655] "subtype4" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[661] "subtype4" "subtype4" "subtype3" "subtype1" "subtype3" "subtype2"
[667] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[673] "subtype3" "subtype1" "subtype5" "subtype4" "subtype5" "subtype1"
[679] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[685] "subtype1" "subtype3" "subtype3" "subtype4" "subtype1" "subtype1"
[691] "subtype1" "subtype5" "subtype4" "subtype1" "subtype1" "subtype4"
[697] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype5"
[703] "subtype4" "subtype4" "subtype5" "subtype4" "subtype4" "subtype1"
[709] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[715] "subtype3" "subtype1" "subtype5" "subtype2" "subtype1" "subtype3"
[721] "subtype3" "subtype3" "subtype4" "subtype1" "subtype4" "subtype1"
[727] "subtype1" "subtype4" "subtype1" "subtype3" "subtype1" "subtype2"
[733] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[739] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype3"
[745] "subtype3" "subtype3" "subtype4" "subtype4" "subtype1" "subtype3"
[751] "subtype4" "subtype5" "subtype1" "subtype2" "subtype4" "subtype3"
[757] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype2"
[763] "subtype3" "subtype1" "subtype4" "subtype1" "subtype4" "subtype1"
[769] "subtype3" "subtype4" "subtype3" "subtype3" "subtype4" "subtype1"
[775] "subtype1" "subtype1" "subtype5" "subtype1" "subtype4" "subtype1"
[781] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[787] "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
  [7] "subtype2" "subtype3" "subtype4" "subtype3" "subtype3" "subtype4"
 [13] "subtype4" "subtype3" "subtype1" "subtype4" "subtype1" "subtype3"
 [19] "subtype4" "subtype4" "subtype1" "subtype1" "subtype3" "subtype1"
 [25] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype3"
 [31] "subtype5" "subtype2" "subtype4" "subtype4" "subtype4" "subtype5"
 [37] "subtype4" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
 [43] "subtype4" "subtype1" "subtype1" "subtype3" "subtype5" "subtype3"
 [49] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype3"
 [55] "subtype4" "subtype4" "subtype1" "subtype4" "subtype1" "subtype4"
 [61] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [67] "subtype1" "subtype4" "subtype1" "subtype3" "subtype5" "subtype1"
 [73] "subtype4" "subtype1" "subtype1" "subtype4" "subtype3" "subtype5"
 [79] "subtype3" "subtype3" "subtype1" "subtype5" "subtype4" "subtype1"
 [85] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype5"
 [91] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype4"
 [97] "subtype1" "subtype1" "subtype3" "subtype4" "subtype4" "subtype2"
[103] "subtype4" "subtype4" "subtype5" "subtype1" "subtype1" "subtype1"
[109] "subtype4" "subtype1" "subtype4" "subtype3" "subtype3" "subtype1"
[115] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[121] "subtype3" "subtype3" "subtype3" "subtype3" "subtype4" "subtype2"
[127] "subtype3" "subtype4" "subtype3" "subtype3" "subtype3" "subtype1"
[133] "subtype2" "subtype3" "subtype3" "subtype1" "subtype5" "subtype4"
[139] "subtype3" "subtype4" "subtype1" "subtype4" "subtype3" "subtype2"
[145] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype4"
[151] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype4"
[157] "subtype3" "subtype3" "subtype4" "subtype3" "subtype1" "subtype4"
[163] "subtype1" "subtype5" "subtype2" "subtype2" "subtype1" "subtype3"
[169] "subtype2" "subtype3" "subtype2" "subtype2" "subtype4" "subtype2"
[175] "subtype3" "subtype4" "subtype3" "subtype4" "subtype4" "subtype3"
[181] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[187] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
[199] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[205] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype1"
[211] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[217] "subtype3" "subtype3" "subtype4" "subtype4" "subtype3" "subtype4"
[223] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[229] "subtype1" "subtype4" "subtype2" "subtype4" "subtype1" "subtype1"
[235] "subtype4" "subtype3" "subtype3" "subtype4" "subtype4" "subtype4"
[241] "subtype3" "subtype4" "subtype1" "subtype2" "subtype1" "subtype1"
[247] "subtype4" "subtype4" "subtype1" "subtype3" "subtype3" "subtype4"
[253] "subtype2" "subtype4" "subtype3" "subtype5" "subtype3" "subtype1"
[259] "subtype4" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[265] "subtype2" "subtype1" "subtype2" "subtype1" "subtype4" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[277] "subtype5" "subtype3" "subtype4" "subtype1" "subtype1" "subtype1"
[283] "subtype4" "subtype2" "subtype1" "subtype4" "subtype3" "subtype4"
[289] "subtype4" "subtype1" "subtype1" "subtype5" "subtype3" "subtype4"
[295] "subtype3" "subtype3" "subtype3" "subtype4" "subtype4" "subtype3"
[301] "subtype3" "subtype1" "subtype4" "subtype3" "subtype2" "subtype1"
[307] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype3"
[313] "subtype4" "subtype4" "subtype3" "subtype5" "subtype4" "subtype4"
[319] "subtype4" "subtype1" "subtype3" "subtype1" "subtype4" "subtype1"
[325] "subtype3" "subtype1" "subtype4" "subtype1" "subtype1" "subtype2"
[331] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype3"
[337] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype3"
[343] "subtype4" "subtype1" "subtype4" "subtype3" "subtype1" "subtype1"
[349] "subtype3" "subtype3" "subtype4" "subtype1" "subtype3" "subtype3"
[355] "subtype4" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype4"
[367] "subtype1" "subtype3" "subtype5" "subtype2" "subtype1" "subtype4"
[373] "subtype3" "subtype2" "subtype4" "subtype4" "subtype1" "subtype1"
[379] "subtype4" "subtype1" "subtype4" "subtype4" "subtype3" "subtype2"
[385] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[391] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype5"
[397] "subtype1" "subtype3" "subtype5" "subtype5" "subtype3" "subtype1"
[403] "subtype1" "subtype5" "subtype1" "subtype1" "subtype1" "subtype5"
[409] "subtype4" "subtype1" "subtype3" "subtype5" "subtype3" "subtype4"
[415] "subtype4" "subtype5" "subtype1" "subtype1" "subtype4" "subtype3"
[421] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype3"
[427] "subtype1" "subtype4" "subtype4" "subtype2" "subtype4" "subtype1"
[433] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype5"
[439] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype1"
[445] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[451] "subtype1" "subtype5" "subtype1" "subtype2" "subtype3" "subtype5"
[457] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
[463] "subtype1" "subtype4" "subtype1" "subtype2" "subtype1" "subtype1"
[469] "subtype1" "subtype1" "subtype4" "subtype2" "subtype5" "subtype1"
[475] "subtype1" "subtype1" "subtype3" "subtype4" "subtype1" "subtype5"
[481] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[487] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[493] "subtype1" "subtype1" "subtype4" "subtype2" "subtype1" "subtype5"
[499] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[505] "subtype4" "subtype3" "subtype5" "subtype4" "subtype3" "subtype4"
[511] "subtype3" "subtype5" "subtype1" "subtype1" "subtype1" "subtype2"
[517] "subtype3" "subtype1" "subtype4" "subtype1" "subtype3" "subtype5"
[523] "subtype4" "subtype3" "subtype1" "subtype5" "subtype5" "subtype1"
[529] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype4"
[535] "subtype1" "subtype1" "subtype5" "subtype2" "subtype4" "subtype5"
[541] "subtype4" "subtype4" "subtype1" "subtype2" "subtype1" "subtype3"
[547] "subtype1" "subtype4" "subtype3" "subtype3" "subtype4" "subtype3"
[553] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype3"
[559] "subtype2" "subtype1" "subtype4" "subtype5" "subtype4" "subtype3"
[565] "subtype4" "subtype1" "subtype4" "subtype4" "subtype1" "subtype1"
[571] "subtype4" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[577] "subtype1" "subtype4" "subtype4" "subtype1" "subtype3" "subtype4"
[583] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype1"
[589] "subtype3" "subtype1" "subtype4" "subtype5" "subtype1" "subtype1"
[595] "subtype3" "subtype3" "subtype1" "subtype1" "subtype5" "subtype5"
[601] "subtype2" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
[607] "subtype4" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[613] "subtype4" "subtype3" "subtype4" "subtype3" "subtype5" "subtype5"
[619] "subtype5" "subtype1" "subtype4" "subtype3" "subtype4" "subtype1"
[625] "subtype1" "subtype1" "subtype4" "subtype3" "subtype1" "subtype3"
[631] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[637] "subtype3" "subtype1" "subtype2" "subtype5" "subtype1" "subtype1"
[643] "subtype1" "subtype2" "subtype3" "subtype1" "subtype4" "subtype3"
[649] "subtype1" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[655] "subtype4" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[661] "subtype4" "subtype4" "subtype3" "subtype1" "subtype3" "subtype2"
[667] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[673] "subtype3" "subtype1" "subtype5" "subtype4" "subtype5" "subtype1"
[679] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[685] "subtype1" "subtype3" "subtype3" "subtype4" "subtype1" "subtype1"
[691] "subtype1" "subtype5" "subtype4" "subtype1" "subtype1" "subtype4"
[697] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype5"
[703] "subtype4" "subtype4" "subtype5" "subtype4" "subtype4" "subtype1"
[709] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[715] "subtype3" "subtype1" "subtype5" "subtype2" "subtype1" "subtype3"
[721] "subtype3" "subtype3" "subtype4" "subtype1" "subtype4" "subtype1"
[727] "subtype1" "subtype4" "subtype1" "subtype3" "subtype1" "subtype2"
[733] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[739] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype3"
[745] "subtype3" "subtype3" "subtype4" "subtype4" "subtype1" "subtype3"
[751] "subtype4" "subtype5" "subtype1" "subtype2" "subtype4" "subtype3"
[757] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype2"
[763] "subtype3" "subtype1" "subtype4" "subtype1" "subtype4" "subtype1"
[769] "subtype3" "subtype4" "subtype3" "subtype3" "subtype4" "subtype1"
[775] "subtype1" "subtype1" "subtype5" "subtype1" "subtype4" "subtype1"
[781] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[787] "subtype2" "subtype1"
D3V2, continuous
D3V3, binary
          cls
clus         0   1
  subtype1 318   0
  subtype2  72   1
  subtype3 188   8
  subtype4 204   0
  subtype5  55   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  318    0
  subtype2   72    1
  subtype3  188    8
  subtype4  204    0
  subtype5   55    0
D3V4, binary
          cls
clus         0   1
  subtype1  67 251
  subtype2  19  54
  subtype3  45 151
  subtype4  57 147
  subtype5  16  39
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   67  251
  subtype2   19   54
  subtype3   45  151
  subtype4   57  147
  subtype5   16   39
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        1 281   4  32
  subtype2        0  67   2   4
  subtype3        0 174   5  17
  subtype4        0 185   3  16
  subtype5        1  46   1   7
D3V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N0 (MOL+) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3B
  subtype1 87      12      56         1 37  50  11   2   10 14  14  7  10   1
  subtype2 23       2       9         0  4  19   3   0    0  1   4  3   4   0
  subtype3 48       1      21         0 29  24   7   0    8 18  19  7   8   0
  subtype4 74       5      35         0 24  21   6   0    3 16  10  2   6   1
  subtype5 13       2       6         0  7  10   5   0    1  2   6  0   2   0
          vv
clus       N3C NX
  subtype1   0  6
  subtype2   0  1
  subtype3   0  6
  subtype4   1  0
  subtype5   0  1
D3V6, multiclass
D3V7, continuous
D3V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      39       35        3        5        95        70         1
  subtype2       3        2        0        1        26        19         0
  subtype3      11        9        2        1        61        43         1
  subtype4      15       12        2        1        83        44         0
  subtype5       3        4        0        0        22        10         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         39          5         15        4         0       7
  subtype2          8          5          4        2         0       3
  subtype3         39         12         11        5         0       1
  subtype4         27          3          9        3         1       3
  subtype5         11          0          2        1         0       2
D3V9, multiclass

Clustering(4) Variable = METHLYATION_CNMF
D4V1, survival
          sevent
clus2        0   1
  subtype1  77  14
  subtype2 118  13
  subtype3  66  12
  subtype4 106  12
  subtype5  29   3
  subtype6  69   7
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      91      131       78      118       32       76 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      14       13       12       12        3        7 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A0SX TCGA-A2-A0T0 
        8.52        31.79        28.01        19.17        42.35        11.08 
TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A7-A13D 
        7.96         8.28        10.72        21.73        12.20         8.78 
TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I TCGA-AC-A2BK TCGA-AC-A2QH 
        9.44         8.45         6.87         4.01        38.53         1.02 
TCGA-AC-A2QJ TCGA-AN-A0XU TCGA-AO-A0JB TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 
        2.27         0.33        37.81        43.36       102.54        96.10 
TCGA-AO-A1KO TCGA-AO-A1KR TCGA-AR-A0TP TCGA-AR-A0TU TCGA-AR-A0U0 TCGA-AR-A0U4 
       14.73        70.36        78.64        11.84         0.26        53.49 
TCGA-AR-A1AI TCGA-AR-A1AN TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-AR-A24Q 
       61.84        43.69        43.04        17.19        20.19        66.02 
TCGA-AR-A24S TCGA-AR-A251 TCGA-AR-A256 TCGA-AR-A2LR TCGA-B6-A0I1 TCGA-B6-A0RE 
       62.07        45.14        93.83        20.38        77.62       211.53 
TCGA-B6-A0RS TCGA-B6-A0RU TCGA-B6-A0WX TCGA-B6-A0X1 TCGA-B6-A1KF TCGA-BH-A0B3 
      100.67       131.21        21.47       186.44       101.52        39.55 
TCGA-BH-A0B9 TCGA-BH-A0E0 TCGA-BH-A0H9 TCGA-BH-A0WA TCGA-BH-A1F6 TCGA-BH-A1FC 
       51.68         4.37        41.00        12.23        97.48       114.12 
TCGA-BH-A1FN TCGA-BH-A1FU TCGA-BH-A208 TCGA-C8-A1HJ TCGA-C8-A26Y TCGA-C8-A27B 
       72.07        72.07        57.83         0.16         0.43         0.99 
TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1JM TCGA-D8-A1XK 
        3.16         6.15         3.58         8.71         7.82        10.72 
TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW TCGA-D8-A27F TCGA-D8-A27H TCGA-E2-A14N 
        5.82         6.35         3.85         7.46         4.60        44.38 
TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK 
       64.57        41.79        11.51        94.52        90.41         8.75 
TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1RB TCGA-E9-A1RH TCGA-E9-A244 TCGA-E9-A24A 
       33.34         7.86         0.69         0.46         0.66         0.33 
TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PH TCGA-GI-A2C9 
       15.22        16.47         7.86        19.99         4.57        23.11 
TCGA-GM-A2DB 
       53.10 

$subtype2
TCGA-A1-A0SE TCGA-A1-A0SH TCGA-A1-A0SI TCGA-A2-A0EU TCGA-A2-A0T5 TCGA-A2-A0YC 
       43.40        47.24        20.84        24.10        10.55        21.14 
TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YL TCGA-A2-A1G0 TCGA-A2-A25C TCGA-A2-A3KD 
       18.08         9.50         8.81        12.49         9.37        26.40 
TCGA-A7-A13F TCGA-A7-A26E TCGA-A7-A3IZ TCGA-A7-A3J0 TCGA-A7-A3J1 TCGA-A7-A3RF 
        6.44        13.84         4.87         2.50         2.47         1.78 
TCGA-A8-A0AD TCGA-AC-A23E TCGA-AC-A2B8 TCGA-AC-A2FG TCGA-AC-A2QI TCGA-AC-A3HN 
       38.04         2.37         1.45        36.99         0.92         0.69 
TCGA-AC-A3TN TCGA-AN-A0XL TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AO-A03N 
        1.12         0.33         0.30         0.33         0.33        54.08 
TCGA-AO-A0JF TCGA-AO-A0JJ TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A12B TCGA-AQ-A1H2 
       11.64        49.71        99.22        93.70        77.56         7.56 
TCGA-AQ-A1H3 TCGA-AR-A0TR TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AS TCGA-AR-A24M 
        4.54         5.26        51.22        48.82        40.83        65.42 
TCGA-AR-A24P TCGA-AR-A2LE TCGA-AR-A2LM TCGA-AR-A2LN TCGA-B6-A0RI TCGA-B6-A0RM 
        0.85       128.65        40.01        17.06       223.40        78.02 
TCGA-B6-A0RN TCGA-B6-A0RP TCGA-B6-A0WZ TCGA-B6-A0X4 TCGA-B6-A0X7 TCGA-B6-A1KI 
      172.96       102.77       129.57        28.24        58.88        48.10 
TCGA-B6-A2IU TCGA-BH-A0AZ TCGA-BH-A0B5 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BJ 
      159.12        28.50        48.36        37.22        32.02        21.70 
TCGA-BH-A0BM TCGA-BH-A0BS TCGA-BH-A0DH TCGA-BH-A0DP TCGA-BH-A0E1 TCGA-BH-A0H6 
       36.72        53.92        38.01        15.65        15.68        24.56 
TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HN TCGA-BH-A0HP TCGA-BH-A0W3 TCGA-BH-A0W4 
       23.90        20.35        16.96        13.61         5.92         5.75 
TCGA-BH-A1ET TCGA-BH-A1EX TCGA-BH-A1F5 TCGA-BH-A1FG TCGA-BH-A1FJ TCGA-BH-A1FL 
       82.85        49.58        89.16       122.89        63.35        55.00 
TCGA-BH-A1FR TCGA-BH-A28Q TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JI TCGA-D8-A1JS 
      144.59         6.44         8.98         1.87         0.69         3.45 
TCGA-D8-A1JT TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A1XC 
        4.04         7.76         2.79         8.94         6.61         2.66 
TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XV TCGA-D8-A1Y1 TCGA-D8-A27E 
        7.96         5.52         0.59         4.80         3.78         5.98 
TCGA-D8-A27K TCGA-D8-A27P TCGA-D8-A27T TCGA-D8-A27V TCGA-E2-A107 TCGA-E2-A10B 
        3.88         0.72         4.44         2.40        25.08        24.59 
TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A1B4 TCGA-E2-A1BC 
       13.74        11.84        13.51        15.22        29.95         9.76 
TCGA-E2-A1IF TCGA-E2-A1IL TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L8 TCGA-E2-A1L9 
       31.43         0.46         4.18        43.13        33.37        12.76 
TCGA-E9-A1R3 TCGA-E9-A1RD TCGA-E9-A1RI TCGA-E9-A226 TCGA-E9-A227 TCGA-E9-A245 
        2.10         0.66         1.58         0.53         0.79         0.82 
TCGA-E9-A249 TCGA-EW-A1IX TCGA-EW-A1J2 TCGA-EW-A1J3 TCGA-EW-A1J5 TCGA-EW-A1P0 
        0.92        35.57         4.57         8.28         7.46        36.85 
TCGA-EW-A1P3 TCGA-EW-A1P5 TCGA-EW-A1PE TCGA-GM-A2D9 TCGA-GM-A3NW 
       32.45        12.00         3.48        59.57        98.04 

$subtype3
TCGA-A1-A0SF TCGA-A1-A0SN TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0SY TCGA-A2-A0T4 
       48.10        39.32        27.12        44.84        37.94        12.99 
TCGA-A2-A0T6 TCGA-A2-A25D TCGA-A2-A3KC TCGA-A7-A26H TCGA-A8-A0A6 TCGA-AC-A23C 
       11.31         7.99        11.93         2.10        21.04         0.95 
TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XV TCGA-AO-A0JE TCGA-AO-A0JM TCGA-AO-A12E 
        0.33        12.33         5.33        64.60        60.03        57.27 
TCGA-AO-A12G TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A04L TCGA-AQ-A0Y5 TCGA-AR-A0TV 
       41.59        17.79        14.43       109.94         5.62        29.72 
TCGA-AR-A0TZ TCGA-AR-A1AP TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A24H TCGA-AR-A24K 
       43.17        39.95        41.82        42.58       109.58        50.89 
TCGA-AR-A24N TCGA-AR-A24R TCGA-AR-A24X TCGA-AR-A250 TCGA-AR-A255 TCGA-AR-A2LK 
       68.19        57.37        48.16        56.12        34.78        42.84 
TCGA-AR-A2LL TCGA-B6-A0RL TCGA-B6-A0WW TCGA-BH-A0DD TCGA-BH-A0DK TCGA-BH-A0DS 
        7.33        81.17        17.95        45.80        13.91         2.53 
TCGA-BH-A0HK TCGA-BH-A0HY TCGA-BH-A1EN TCGA-BH-A1EV TCGA-BH-A1EY TCGA-BH-A1FD 
        5.85        28.50        67.46        12.00        17.69        33.14 
TCGA-BH-A202 TCGA-BH-A203 TCGA-C8-A26V TCGA-C8-A274 TCGA-C8-A275 TCGA-D8-A1J8 
        0.72        38.60         0.30         0.03         0.03         8.42 
TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1XJ TCGA-D8-A1XU 
        8.15         0.59         9.01         7.13        11.57         4.90 
TCGA-D8-A1Y3 TCGA-D8-A27G TCGA-D8-A27N TCGA-E2-A1BD TCGA-E2-A1L7 TCGA-E2-A1LE 
        4.08         6.87         4.77        10.42        20.81        28.90 
TCGA-E2-A2P5 TCGA-E2-A2P6 TCGA-E9-A1R5 TCGA-E9-A1RC TCGA-E9-A247 TCGA-E9-A2JS 
       10.72         5.49         1.38        40.37         0.39         0.43 
TCGA-E9-A3HO TCGA-EW-A1IW TCGA-EW-A1OZ TCGA-EW-A1PC TCGA-GM-A2DL TCGA-GM-A3NY 
        0.62         8.28        30.94         6.12        90.81        24.43 

$subtype4
TCGA-A1-A0SG TCGA-A1-A0SJ TCGA-A1-A0SQ TCGA-A2-A04R TCGA-A2-A0CT TCGA-A2-A0T7 
       14.24        14.01        18.18        77.72        63.02        13.05 
TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW TCGA-A2-A1FX 
       13.28        12.46        23.77        15.12         7.27        30.74 
TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25E TCGA-A7-A0D9 TCGA-A7-A26J TCGA-A7-A2KD 
       12.23         8.48        82.55         5.23         2.20         5.95 
TCGA-A8-A075 TCGA-A8-A08O TCGA-AC-A23H TCGA-AC-A2BM TCGA-AC-A2FM TCGA-AN-A0XT 
       17.00        30.97         2.66        38.20        26.04         0.33 
TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A0JA TCGA-AO-A0JD TCGA-AO-A0JG TCGA-AO-A0JI 
       80.28        47.84        11.38        59.61        14.76        38.53 
TCGA-AO-A12C TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AR-A0TQ TCGA-AR-A0TW 
       65.52        82.62        49.94         0.53        49.32        24.30 
TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A24L TCGA-AR-A24V TCGA-AR-A24Z TCGA-B6-A0RG 
       83.87        74.40        73.02        54.18        51.75        68.45 
TCGA-B6-A0RO TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WY TCGA-B6-A0X5 TCGA-B6-A1KC 
      162.02       177.40        79.63       113.75        68.94        43.59 
TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0AW TCGA-BH-A0B8 TCGA-BH-A0BT TCGA-BH-A0BZ 
      109.48        24.53        20.45        51.58        45.57        49.05 
TCGA-BH-A0DQ TCGA-BH-A0E2 TCGA-BH-A0GY TCGA-BH-A0H0 TCGA-BH-A0H7 TCGA-BH-A0HA 
        3.22        12.36        30.15        15.16        23.05        28.14 
TCGA-BH-A0HB TCGA-BH-A0HX TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1F2 TCGA-BH-A1F8 
       26.50        27.25        91.99       113.82        31.53        24.62 
TCGA-BH-A1FM TCGA-BH-A204 TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A1HN 
       45.63        83.31         0.23         0.07         0.20         0.07 
TCGA-C8-A26W TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A27A TCGA-D8-A1JC TCGA-D8-A1X5 
        0.23         0.13         0.20        12.20         5.85         5.62 
TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XY TCGA-D8-A1XZ 
       12.49         9.01         5.10         6.48         2.66         3.95 
TCGA-D8-A1Y0 TCGA-D8-A27R TCGA-D8-A27W TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 
        5.46         2.96         0.49        38.24        51.12        38.53 
TCGA-E2-A10C TCGA-E2-A15K TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IH TCGA-E2-A1IN 
       28.04         1.12        32.32        24.82        21.63        12.89 
TCGA-E2-A1IO TCGA-E2-A1LA TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RE TCGA-E9-A1RF 
       14.73        15.22         2.76         1.12         1.55         1.25 
TCGA-E9-A1RG TCGA-E9-A295 TCGA-EW-A1J1 TCGA-EW-A1J6 TCGA-EW-A1OX TCGA-EW-A1OY 
        1.15         0.69         9.27        19.56        18.48        19.50 
TCGA-EW-A1P6 TCGA-EW-A1PA TCGA-EW-A1PF TCGA-EW-A2FS TCGA-EW-A2FV TCGA-EW-A2FW 
       10.26         8.78         4.57        38.56         7.82         6.25 
TCGA-GI-A2C8 TCGA-GM-A2DA TCGA-GM-A2DC TCGA-GM-A2DK 
        6.97       194.27        53.52        62.33 

$subtype5
TCGA-A1-A0SM TCGA-A2-A0SU TCGA-A2-A1FZ TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A7-A13G 
        7.96        44.42        13.45         4.34        42.25         6.84 
TCGA-AR-A1AU TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A254 TCGA-B6-A0IK TCGA-B6-A0RV 
       46.32        53.26        50.96        39.85        18.77       157.41 
TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0GZ TCGA-BH-A0H3 TCGA-BH-A1EW TCGA-BH-A1FH 
       23.44        22.13        10.78        37.78        55.69        36.92 
TCGA-BH-A201 TCGA-BH-A28O TCGA-C8-A1HI TCGA-D8-A1JH TCGA-D8-A1JP TCGA-D8-A1XG 
        6.87        10.62         0.07         9.34         5.49         6.44 
TCGA-D8-A1XL TCGA-D8-A1XM TCGA-E2-A14U TCGA-E2-A1LB TCGA-E9-A1R2 TCGA-EW-A1PD 
       10.49         7.17        27.55        31.96         0.62         5.72 
TCGA-EW-A2FR TCGA-GM-A2DM 
       36.82        76.64 

$subtype6
TCGA-A2-A0EN TCGA-A2-A0ST TCGA-A2-A0T1 TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A25A 
       82.68        54.02        10.59        11.77        10.98        97.58 
TCGA-A2-A25F TCGA-A7-A3IY TCGA-AC-A23G TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FK 
        3.72         4.96        10.82         1.45        55.40        38.79 
TCGA-AC-A2FO TCGA-AC-A3BB TCGA-AC-A3OD TCGA-AN-A0XW TCGA-AO-A03U TCGA-AO-A0JC 
       50.70         0.99         1.15         5.59        59.05        50.86 
TCGA-AO-A128 TCGA-AR-A0TT TCGA-AR-A0TX TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AW 
       94.59        55.20         0.49        52.73        43.53        35.24 
TCGA-AR-A1AX TCGA-AR-A24O TCGA-AR-A24U TCGA-AR-A252 TCGA-AR-A2LH TCGA-AR-A2LO 
       36.26        65.65        53.36        40.64        20.22        20.81 
TCGA-AR-A2LQ TCGA-B6-A0RT TCGA-BH-A0B6 TCGA-BH-A0BF TCGA-BH-A0C0 TCGA-BH-A0C3 
       16.96        89.46        56.94        25.68        41.75        48.13 
TCGA-BH-A0DV TCGA-BH-A0RX TCGA-BH-A0W5 TCGA-BH-A1EU TCGA-BH-A1F0 TCGA-BH-A1FB 
       45.17         5.59        17.85        42.28        25.81       120.62 
TCGA-BH-A1FE TCGA-BH-A209 TCGA-C8-A26X TCGA-C8-A278 TCGA-D8-A1JU TCGA-D8-A1Y2 
       74.73       130.16         0.36         0.03         3.48         2.37 
TCGA-D8-A27I TCGA-D8-A27L TCGA-D8-A27M TCGA-E2-A108 TCGA-E2-A1B1 TCGA-E2-A1B5 
        6.08         4.11         4.73         4.08        44.75        25.45 
TCGA-E2-A1B6 TCGA-E2-A1II TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A3DX TCGA-E9-A1R4 
       11.11        27.95        23.84        17.03         7.13         0.95 
TCGA-E9-A1RA TCGA-E9-A243 TCGA-E9-A248 TCGA-E9-A2JT TCGA-EW-A1IY TCGA-EW-A1IZ 
        0.95         1.41         0.69         0.76         8.48         8.55 
TCGA-EW-A1OV TCGA-EW-A1P1 TCGA-EW-A1P7 TCGA-EW-A1PG TCGA-GM-A2DD TCGA-GM-A2DF 
       17.16        30.21        20.88        28.77        43.04        42.71 
TCGA-GM-A2DH TCGA-GM-A2DI TCGA-GM-A2DN TCGA-GM-A2DO 
       42.28        61.91        77.33        53.33 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
    0.16     0.30     0.03     0.07     0.07     0.03 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  211.53   223.40   109.94   194.27   157.41   130.16 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  19.170   13.610   16.060   18.990   20.450   25.565 
[1] "0.2 - 211.5 (19.2)" "0.3 - 223.4 (13.6)" "0.0 - 109.9 (16.1)"
[4] "0.1 - 194.3 (19.0)" "0.1 - 157.4 (20.4)" "0.0 - 130.2 (25.6)"
  [1] "subtype1" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
  [7] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype1"
 [13] "subtype4" "subtype4" "subtype4" "subtype6" "subtype2" "subtype6"
 [19] "subtype5" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [25] "subtype6" "subtype1" "subtype3" "subtype2" "subtype3" "subtype4"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype4" "subtype4"
 [37] "subtype6" "subtype1" "subtype6" "subtype2" "subtype1" "subtype4"
 [43] "subtype4" "subtype4" "subtype4" "subtype5" "subtype2" "subtype1"
 [49] "subtype4" "subtype5" "subtype5" "subtype6" "subtype4" "subtype2"
 [55] "subtype3" "subtype4" "subtype6" "subtype3" "subtype2" "subtype4"
 [61] "subtype1" "subtype1" "subtype2" "subtype5" "subtype2" "subtype1"
 [67] "subtype1" "subtype3" "subtype1" "subtype4" "subtype4" "subtype6"
 [73] "subtype2" "subtype2" "subtype2" "subtype2" "subtype4" "subtype4"
 [79] "subtype3" "subtype2" "subtype3" "subtype2" "subtype6" "subtype4"
 [85] "subtype2" "subtype1" "subtype4" "subtype6" "subtype6" "subtype2"
 [91] "subtype6" "subtype4" "subtype6" "subtype1" "subtype2" "subtype1"
 [97] "subtype6" "subtype2" "subtype6" "subtype2" "subtype2" "subtype3"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype4" "subtype1"
[109] "subtype3" "subtype6" "subtype4" "subtype4" "subtype2" "subtype6"
[115] "subtype4" "subtype1" "subtype6" "subtype4" "subtype3" "subtype2"
[121] "subtype4" "subtype4" "subtype2" "subtype1" "subtype3" "subtype1"
[127] "subtype2" "subtype2" "subtype6" "subtype1" "subtype2" "subtype4"
[133] "subtype3" "subtype3" "subtype1" "subtype4" "subtype4" "subtype1"
[139] "subtype4" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[145] "subtype2" "subtype1" "subtype4" "subtype2" "subtype6" "subtype1"
[151] "subtype3" "subtype4" "subtype6" "subtype3" "subtype1" "subtype4"
[157] "subtype4" "subtype1" "subtype1" "subtype6" "subtype2" "subtype2"
[163] "subtype1" "subtype6" "subtype3" "subtype1" "subtype1" "subtype2"
[169] "subtype3" "subtype5" "subtype3" "subtype6" "subtype6" "subtype1"
[175] "subtype3" "subtype3" "subtype4" "subtype2" "subtype3" "subtype6"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype5" "subtype6"
[187] "subtype4" "subtype5" "subtype3" "subtype4" "subtype3" "subtype1"
[193] "subtype6" "subtype5" "subtype3" "subtype1" "subtype2" "subtype6"
[199] "subtype3" "subtype3" "subtype2" "subtype2" "subtype6" "subtype6"
[205] "subtype1" "subtype1" "subtype5" "subtype1" "subtype4" "subtype2"
[211] "subtype3" "subtype2" "subtype2" "subtype4" "subtype2" "subtype1"
[217] "subtype6" "subtype1" "subtype5" "subtype4" "subtype4" "subtype3"
[223] "subtype1" "subtype4" "subtype2" "subtype1" "subtype2" "subtype4"
[229] "subtype2" "subtype4" "subtype1" "subtype2" "subtype4" "subtype2"
[235] "subtype4" "subtype4" "subtype2" "subtype1" "subtype2" "subtype6"
[241] "subtype4" "subtype1" "subtype2" "subtype2" "subtype6" "subtype2"
[247] "subtype2" "subtype2" "subtype4" "subtype4" "subtype6" "subtype6"
[253] "subtype3" "subtype5" "subtype2" "subtype5" "subtype3" "subtype2"
[259] "subtype4" "subtype3" "subtype6" "subtype1" "subtype2" "subtype4"
[265] "subtype4" "subtype5" "subtype4" "subtype5" "subtype2" "subtype4"
[271] "subtype1" "subtype4" "subtype4" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype2" "subtype4" "subtype3" "subtype6" "subtype2"
[283] "subtype2" "subtype6" "subtype1" "subtype3" "subtype4" "subtype4"
[289] "subtype2" "subtype6" "subtype3" "subtype5" "subtype2" "subtype3"
[295] "subtype6" "subtype4" "subtype2" "subtype1" "subtype4" "subtype6"
[301] "subtype1" "subtype3" "subtype6" "subtype2" "subtype5" "subtype2"
[307] "subtype2" "subtype4" "subtype1" "subtype2" "subtype1" "subtype5"
[313] "subtype3" "subtype3" "subtype4" "subtype1" "subtype6" "subtype5"
[319] "subtype2" "subtype5" "subtype1" "subtype4" "subtype4" "subtype4"
[325] "subtype4" "subtype3" "subtype4" "subtype6" "subtype1" "subtype4"
[331] "subtype4" "subtype3" "subtype3" "subtype6" "subtype4" "subtype1"
[337] "subtype3" "subtype3" "subtype3" "subtype4" "subtype2" "subtype2"
[343] "subtype1" "subtype1" "subtype5" "subtype2" "subtype3" "subtype1"
[349] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype2"
[355] "subtype6" "subtype4" "subtype2" "subtype2" "subtype2" "subtype4"
[361] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype5"
[367] "subtype3" "subtype1" "subtype5" "subtype5" "subtype2" "subtype1"
[373] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[379] "subtype4" "subtype4" "subtype4" "subtype2" "subtype6" "subtype3"
[385] "subtype2" "subtype1" "subtype3" "subtype1" "subtype6" "subtype2"
[391] "subtype6" "subtype6" "subtype3" "subtype2" "subtype4" "subtype2"
[397] "subtype2" "subtype4" "subtype4" "subtype4" "subtype2" "subtype6"
[403] "subtype4" "subtype2" "subtype4" "subtype2" "subtype2" "subtype1"
[409] "subtype5" "subtype2" "subtype2" "subtype4" "subtype1" "subtype1"
[415] "subtype6" "subtype2" "subtype6" "subtype6" "subtype2" "subtype3"
[421] "subtype4" "subtype2" "subtype4" "subtype4" "subtype6" "subtype6"
[427] "subtype6" "subtype2" "subtype4" "subtype4" "subtype2" "subtype2"
[433] "subtype3" "subtype2" "subtype2" "subtype4" "subtype5" "subtype3"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[445] "subtype3" "subtype3" "subtype6" "subtype5" "subtype2" "subtype6"
[451] "subtype3" "subtype4" "subtype4" "subtype6" "subtype1" "subtype3"
[457] "subtype2" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
[463] "subtype2" "subtype2" "subtype6" "subtype1" "subtype2" "subtype3"
[469] "subtype6" "subtype2" "subtype1" "subtype4" "subtype3" "subtype6"
[475] "subtype3" "subtype3" "subtype2" "subtype6" "subtype6" "subtype4"
[481] "subtype2" "subtype2" "subtype2" "subtype4" "subtype6" "subtype1"
[487] "subtype4" "subtype4" "subtype3" "subtype2" "subtype6" "subtype2"
[493] "subtype1" "subtype2" "subtype4" "subtype6" "subtype1" "subtype4"
[499] "subtype1" "subtype3" "subtype5" "subtype2" "subtype4" "subtype6"
[505] "subtype1" "subtype5" "subtype4" "subtype4" "subtype4" "subtype4"
[511] "subtype1" "subtype2" "subtype4" "subtype1" "subtype4" "subtype6"
[517] "subtype6" "subtype6" "subtype6" "subtype4" "subtype3" "subtype5"
[523] "subtype6" "subtype6" "subtype2" "subtype3"
  [1] "subtype1" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
  [7] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype1"
 [13] "subtype4" "subtype4" "subtype4" "subtype6" "subtype2" "subtype6"
 [19] "subtype5" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [25] "subtype6" "subtype1" "subtype3" "subtype2" "subtype3" "subtype4"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype4" "subtype4"
 [37] "subtype6" "subtype1" "subtype6" "subtype2" "subtype1" "subtype4"
 [43] "subtype4" "subtype4" "subtype4" "subtype5" "subtype2" "subtype1"
 [49] "subtype4" "subtype5" "subtype5" "subtype6" "subtype4" "subtype2"
 [55] "subtype3" "subtype4" "subtype6" "subtype3" "subtype2" "subtype4"
 [61] "subtype1" "subtype1" "subtype2" "subtype5" "subtype2" "subtype1"
 [67] "subtype1" "subtype3" "subtype1" "subtype4" "subtype4" "subtype6"
 [73] "subtype2" "subtype2" "subtype2" "subtype2" "subtype4" "subtype4"
 [79] "subtype3" "subtype2" "subtype3" "subtype2" "subtype6" "subtype4"
 [85] "subtype2" "subtype1" "subtype4" "subtype6" "subtype6" "subtype2"
 [91] "subtype6" "subtype4" "subtype6" "subtype1" "subtype2" "subtype1"
 [97] "subtype6" "subtype2" "subtype6" "subtype2" "subtype2" "subtype3"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype4" "subtype1"
[109] "subtype3" "subtype6" "subtype4" "subtype4" "subtype2" "subtype6"
[115] "subtype4" "subtype1" "subtype6" "subtype4" "subtype3" "subtype2"
[121] "subtype4" "subtype4" "subtype2" "subtype1" "subtype3" "subtype1"
[127] "subtype2" "subtype2" "subtype6" "subtype1" "subtype2" "subtype4"
[133] "subtype3" "subtype3" "subtype1" "subtype4" "subtype4" "subtype1"
[139] "subtype4" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[145] "subtype2" "subtype1" "subtype4" "subtype2" "subtype6" "subtype1"
[151] "subtype3" "subtype4" "subtype6" "subtype3" "subtype1" "subtype4"
[157] "subtype4" "subtype1" "subtype1" "subtype6" "subtype2" "subtype2"
[163] "subtype1" "subtype6" "subtype3" "subtype1" "subtype1" "subtype2"
[169] "subtype3" "subtype5" "subtype3" "subtype6" "subtype6" "subtype1"
[175] "subtype3" "subtype3" "subtype4" "subtype2" "subtype3" "subtype6"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype5" "subtype6"
[187] "subtype4" "subtype5" "subtype3" "subtype4" "subtype3" "subtype1"
[193] "subtype6" "subtype5" "subtype3" "subtype1" "subtype2" "subtype6"
[199] "subtype3" "subtype3" "subtype2" "subtype2" "subtype6" "subtype6"
[205] "subtype1" "subtype1" "subtype5" "subtype1" "subtype4" "subtype2"
[211] "subtype3" "subtype2" "subtype2" "subtype4" "subtype2" "subtype1"
[217] "subtype6" "subtype1" "subtype5" "subtype4" "subtype4" "subtype3"
[223] "subtype1" "subtype4" "subtype2" "subtype1" "subtype2" "subtype4"
[229] "subtype2" "subtype4" "subtype1" "subtype2" "subtype4" "subtype2"
[235] "subtype4" "subtype4" "subtype2" "subtype1" "subtype2" "subtype6"
[241] "subtype4" "subtype1" "subtype2" "subtype2" "subtype6" "subtype2"
[247] "subtype2" "subtype2" "subtype4" "subtype4" "subtype6" "subtype6"
[253] "subtype3" "subtype5" "subtype2" "subtype5" "subtype3" "subtype2"
[259] "subtype4" "subtype3" "subtype6" "subtype1" "subtype2" "subtype4"
[265] "subtype4" "subtype5" "subtype4" "subtype5" "subtype2" "subtype4"
[271] "subtype1" "subtype4" "subtype4" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype2" "subtype4" "subtype3" "subtype6" "subtype2"
[283] "subtype2" "subtype6" "subtype1" "subtype3" "subtype4" "subtype4"
[289] "subtype2" "subtype6" "subtype3" "subtype5" "subtype2" "subtype3"
[295] "subtype6" "subtype4" "subtype2" "subtype1" "subtype4" "subtype6"
[301] "subtype1" "subtype3" "subtype6" "subtype2" "subtype5" "subtype2"
[307] "subtype2" "subtype4" "subtype1" "subtype2" "subtype1" "subtype5"
[313] "subtype3" "subtype3" "subtype4" "subtype1" "subtype6" "subtype5"
[319] "subtype2" "subtype5" "subtype1" "subtype4" "subtype4" "subtype4"
[325] "subtype4" "subtype3" "subtype4" "subtype6" "subtype1" "subtype4"
[331] "subtype4" "subtype3" "subtype3" "subtype6" "subtype4" "subtype1"
[337] "subtype3" "subtype3" "subtype3" "subtype4" "subtype2" "subtype2"
[343] "subtype1" "subtype1" "subtype5" "subtype2" "subtype3" "subtype1"
[349] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype2"
[355] "subtype6" "subtype4" "subtype2" "subtype2" "subtype2" "subtype4"
[361] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype5"
[367] "subtype3" "subtype1" "subtype5" "subtype5" "subtype2" "subtype1"
[373] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[379] "subtype4" "subtype4" "subtype4" "subtype2" "subtype6" "subtype3"
[385] "subtype2" "subtype1" "subtype3" "subtype1" "subtype6" "subtype2"
[391] "subtype6" "subtype6" "subtype3" "subtype2" "subtype4" "subtype2"
[397] "subtype2" "subtype4" "subtype4" "subtype4" "subtype2" "subtype6"
[403] "subtype4" "subtype2" "subtype4" "subtype2" "subtype2" "subtype1"
[409] "subtype5" "subtype2" "subtype2" "subtype4" "subtype1" "subtype1"
[415] "subtype6" "subtype2" "subtype6" "subtype6" "subtype2" "subtype3"
[421] "subtype4" "subtype2" "subtype4" "subtype4" "subtype6" "subtype6"
[427] "subtype6" "subtype2" "subtype4" "subtype4" "subtype2" "subtype2"
[433] "subtype3" "subtype2" "subtype2" "subtype4" "subtype5" "subtype3"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[445] "subtype3" "subtype3" "subtype6" "subtype5" "subtype2" "subtype6"
[451] "subtype3" "subtype4" "subtype4" "subtype6" "subtype1" "subtype3"
[457] "subtype2" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
[463] "subtype2" "subtype2" "subtype6" "subtype1" "subtype2" "subtype3"
[469] "subtype6" "subtype2" "subtype1" "subtype4" "subtype3" "subtype6"
[475] "subtype3" "subtype3" "subtype2" "subtype6" "subtype6" "subtype4"
[481] "subtype2" "subtype2" "subtype2" "subtype4" "subtype6" "subtype1"
[487] "subtype4" "subtype4" "subtype3" "subtype2" "subtype6" "subtype2"
[493] "subtype1" "subtype2" "subtype4" "subtype6" "subtype1" "subtype4"
[499] "subtype1" "subtype3" "subtype5" "subtype2" "subtype4" "subtype6"
[505] "subtype1" "subtype5" "subtype4" "subtype4" "subtype4" "subtype4"
[511] "subtype1" "subtype2" "subtype4" "subtype1" "subtype4" "subtype6"
[517] "subtype6" "subtype6" "subtype6" "subtype4" "subtype3" "subtype5"
[523] "subtype6" "subtype6" "subtype2" "subtype3"
  [1] "subtype1" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
  [7] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype1"
 [13] "subtype4" "subtype4" "subtype4" "subtype6" "subtype2" "subtype6"
 [19] "subtype5" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [25] "subtype6" "subtype1" "subtype3" "subtype2" "subtype3" "subtype4"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype4" "subtype4"
 [37] "subtype6" "subtype1" "subtype6" "subtype2" "subtype1" "subtype4"
 [43] "subtype4" "subtype4" "subtype4" "subtype5" "subtype2" "subtype1"
 [49] "subtype4" "subtype5" "subtype5" "subtype6" "subtype4" "subtype2"
 [55] "subtype3" "subtype4" "subtype6" "subtype3" "subtype2" "subtype4"
 [61] "subtype1" "subtype1" "subtype2" "subtype5" "subtype2" "subtype1"
 [67] "subtype1" "subtype3" "subtype1" "subtype4" "subtype4" "subtype6"
 [73] "subtype2" "subtype2" "subtype2" "subtype2" "subtype4" "subtype4"
 [79] "subtype3" "subtype2" "subtype3" "subtype2" "subtype6" "subtype4"
 [85] "subtype2" "subtype1" "subtype4" "subtype6" "subtype6" "subtype2"
 [91] "subtype6" "subtype4" "subtype6" "subtype1" "subtype2" "subtype1"
 [97] "subtype6" "subtype2" "subtype6" "subtype2" "subtype2" "subtype3"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype4" "subtype1"
[109] "subtype3" "subtype6" "subtype4" "subtype4" "subtype2" "subtype6"
[115] "subtype4" "subtype1" "subtype6" "subtype4" "subtype3" "subtype2"
[121] "subtype4" "subtype4" "subtype2" "subtype1" "subtype3" "subtype1"
[127] "subtype2" "subtype2" "subtype6" "subtype1" "subtype2" "subtype4"
[133] "subtype3" "subtype3" "subtype1" "subtype4" "subtype4" "subtype1"
[139] "subtype4" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[145] "subtype2" "subtype1" "subtype4" "subtype2" "subtype6" "subtype1"
[151] "subtype3" "subtype4" "subtype6" "subtype3" "subtype1" "subtype4"
[157] "subtype4" "subtype1" "subtype1" "subtype6" "subtype2" "subtype2"
[163] "subtype1" "subtype6" "subtype3" "subtype1" "subtype1" "subtype2"
[169] "subtype3" "subtype5" "subtype3" "subtype6" "subtype6" "subtype1"
[175] "subtype3" "subtype3" "subtype4" "subtype2" "subtype3" "subtype6"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype5" "subtype6"
[187] "subtype4" "subtype5" "subtype3" "subtype4" "subtype3" "subtype1"
[193] "subtype6" "subtype5" "subtype3" "subtype1" "subtype2" "subtype6"
[199] "subtype3" "subtype3" "subtype2" "subtype2" "subtype6" "subtype6"
[205] "subtype1" "subtype1" "subtype5" "subtype1" "subtype4" "subtype2"
[211] "subtype3" "subtype2" "subtype2" "subtype4" "subtype2" "subtype1"
[217] "subtype6" "subtype1" "subtype5" "subtype4" "subtype4" "subtype3"
[223] "subtype1" "subtype4" "subtype2" "subtype1" "subtype2" "subtype4"
[229] "subtype2" "subtype4" "subtype1" "subtype2" "subtype4" "subtype2"
[235] "subtype4" "subtype4" "subtype2" "subtype1" "subtype2" "subtype6"
[241] "subtype4" "subtype1" "subtype2" "subtype2" "subtype6" "subtype2"
[247] "subtype2" "subtype2" "subtype4" "subtype4" "subtype6" "subtype6"
[253] "subtype3" "subtype5" "subtype2" "subtype5" "subtype3" "subtype2"
[259] "subtype4" "subtype3" "subtype6" "subtype1" "subtype2" "subtype4"
[265] "subtype4" "subtype5" "subtype4" "subtype5" "subtype2" "subtype4"
[271] "subtype1" "subtype4" "subtype4" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype2" "subtype4" "subtype3" "subtype6" "subtype2"
[283] "subtype2" "subtype6" "subtype1" "subtype3" "subtype4" "subtype4"
[289] "subtype2" "subtype6" "subtype3" "subtype5" "subtype2" "subtype3"
[295] "subtype6" "subtype4" "subtype2" "subtype1" "subtype4" "subtype6"
[301] "subtype1" "subtype3" "subtype6" "subtype2" "subtype5" "subtype2"
[307] "subtype2" "subtype4" "subtype1" "subtype2" "subtype1" "subtype5"
[313] "subtype3" "subtype3" "subtype4" "subtype1" "subtype6" "subtype5"
[319] "subtype2" "subtype5" "subtype1" "subtype4" "subtype4" "subtype4"
[325] "subtype4" "subtype3" "subtype4" "subtype6" "subtype1" "subtype4"
[331] "subtype4" "subtype3" "subtype3" "subtype6" "subtype4" "subtype1"
[337] "subtype3" "subtype3" "subtype3" "subtype4" "subtype2" "subtype2"
[343] "subtype1" "subtype1" "subtype5" "subtype2" "subtype3" "subtype1"
[349] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype2"
[355] "subtype6" "subtype4" "subtype2" "subtype2" "subtype2" "subtype4"
[361] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype5"
[367] "subtype3" "subtype1" "subtype5" "subtype5" "subtype2" "subtype1"
[373] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[379] "subtype4" "subtype4" "subtype4" "subtype2" "subtype6" "subtype3"
[385] "subtype2" "subtype1" "subtype3" "subtype1" "subtype6" "subtype2"
[391] "subtype6" "subtype6" "subtype3" "subtype2" "subtype4" "subtype2"
[397] "subtype2" "subtype4" "subtype4" "subtype4" "subtype2" "subtype6"
[403] "subtype4" "subtype2" "subtype4" "subtype2" "subtype2" "subtype1"
[409] "subtype5" "subtype2" "subtype2" "subtype4" "subtype1" "subtype1"
[415] "subtype6" "subtype2" "subtype6" "subtype6" "subtype2" "subtype3"
[421] "subtype4" "subtype2" "subtype4" "subtype4" "subtype6" "subtype6"
[427] "subtype6" "subtype2" "subtype4" "subtype4" "subtype2" "subtype2"
[433] "subtype3" "subtype2" "subtype2" "subtype4" "subtype5" "subtype3"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[445] "subtype3" "subtype3" "subtype6" "subtype5" "subtype2" "subtype6"
[451] "subtype3" "subtype4" "subtype4" "subtype6" "subtype1" "subtype3"
[457] "subtype2" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
[463] "subtype2" "subtype2" "subtype6" "subtype1" "subtype2" "subtype3"
[469] "subtype6" "subtype2" "subtype1" "subtype4" "subtype3" "subtype6"
[475] "subtype3" "subtype3" "subtype2" "subtype6" "subtype6" "subtype4"
[481] "subtype2" "subtype2" "subtype2" "subtype4" "subtype6" "subtype1"
[487] "subtype4" "subtype4" "subtype3" "subtype2" "subtype6" "subtype2"
[493] "subtype1" "subtype2" "subtype4" "subtype6" "subtype1" "subtype4"
[499] "subtype1" "subtype3" "subtype5" "subtype2" "subtype4" "subtype6"
[505] "subtype1" "subtype5" "subtype4" "subtype4" "subtype4" "subtype4"
[511] "subtype1" "subtype2" "subtype4" "subtype1" "subtype4" "subtype6"
[517] "subtype6" "subtype6" "subtype6" "subtype4" "subtype3" "subtype5"
[523] "subtype6" "subtype6" "subtype2" "subtype3"
D4V2, continuous
D4V3, binary
          cls
clus         0   1
  subtype1  96   0
  subtype2 138   1
  subtype3  78   2
  subtype4 124   1
  subtype5  31   2
  subtype6  82   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   96    0
  subtype2  138    1
  subtype3   78    2
  subtype4  124    1
  subtype5   31    2
  subtype6   82    0
D4V4, binary
          cls
clus         0   1
  subtype1  29  67
  subtype2  34 105
  subtype3  17  63
  subtype4  38  87
  subtype5   5  28
  subtype6  19  63
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   29   67
  subtype2   34  105
  subtype3   17   63
  subtype4   38   87
  subtype5    5   28
  subtype6   19   63
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0  85   2   9
  subtype2        1 119   0  19
  subtype3        0  67   2  11
  subtype4        0 111   1  13
  subtype5        0  28   1   4
  subtype6        0  70   0  12
D4V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N0 (MOL+) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3B
  subtype1 40       2      15         0 11  10   3   0    0  5   6  1   2   1
  subtype2 29       3      19         1 12  35   8   1    5  8   8  2   4   0
  subtype3 24       2      10         0 10   7   3   0    0  9   7  2   4   0
  subtype4 23       2      16         0 24  20   6   0    5  8  13  2   5   0
  subtype5  9       1       4         0  3   5   2   0    0  4   1  3   1   0
  subtype6 25       4      14         0 12   6   1   1    4  4   6  3   1   1
          vv
clus       NX
  subtype1  0
  subtype2  4
  subtype3  2
  subtype4  1
  subtype5  0
  subtype6  0
D4V6, multiclass
D4V7, continuous
D4V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1       5        7        1        1        40        21         0
  subtype2      12       13        0        2        37        39         0
  subtype3       6        3        1        2        26        15         1
  subtype4       7        7        1        0        35        33         0
  subtype5       2        5        0        1        10         3         0
  subtype6      15        5        0        2        33        12         1
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE X
  subtype1         13          1          3        2       1
  subtype2         24          4          6        0       2
  subtype3         16          0          6        2       2
  subtype4         27          8          6        1       0
  subtype5          5          2          4        1       0
  subtype6         10          0          4        0       0
D4V9, multiclass

Clustering(5) Variable = RPPA_CNMF
D5V1, survival
          sevent
clus2        0   1
  subtype1 113  22
  subtype2 121  11
  subtype3 102  11
subtype1 subtype2 subtype3 
     135      132      113 
subtype1 subtype2 subtype3 
      22       11       11 
$subtype1
TCGA-A1-A0SH TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U 
       47.24        31.79        28.01        17.98        64.11        22.03 
TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0CY 
       63.06        25.08        60.07        24.79        42.84        42.35 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0EY TCGA-A2-A0SV 
       21.14        25.84        25.02        67.50        15.95        27.12 
TCGA-A2-A0SW TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0YE 
       44.84        42.35        11.08        10.59         7.96         8.28 
TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A7-A0CE TCGA-A7-A0CJ 
       13.28        12.46        10.72        21.73         8.32         6.18 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A06R TCGA-A8-A06U TCGA-A8-A06X 
       12.26         8.78         9.44        17.95        29.00        31.00 
TCGA-A8-A06Y TCGA-A8-A075 TCGA-A8-A07I TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07W 
       26.01        17.00        14.01         9.99         8.98         9.99 
TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A08X TCGA-A8-A09A TCGA-A8-A09I 
       37.05         9.99        30.97        33.99         9.99        33.07 
TCGA-A8-A09M TCGA-A8-A09R TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AN-A04D TCGA-AN-A0AK 
       15.02         8.98        14.01         0.99         1.71         7.33 
TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AS TCGA-AN-A0AT TCGA-AN-A0FJ 
        6.48         0.16         0.30         0.30         0.33         7.92 
TCGA-AN-A0FL TCGA-AN-A0FV TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AN-A0XW TCGA-AO-A03L 
        7.56         0.33         0.53         0.33         5.59        80.28 
TCGA-AO-A03M TCGA-AO-A03O TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J6 TCGA-AO-A0JB 
       47.84        81.63        59.05        19.23        25.48        37.81 
TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D 
       59.61        64.60        43.36       102.54        96.10        64.04 
TCGA-AO-A12F TCGA-AR-A0TP TCGA-AR-A0TQ TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TU 
       48.36        78.64        49.32        37.41        55.20        11.84 
TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U3 
       29.72        24.30        55.86         0.26         6.08        74.40 
TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AT TCGA-AR-A1AY 
       75.55        61.84        43.53        43.04        41.82        20.19 
TCGA-B6-A0I6 TCGA-B6-A0I9 TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RU TCGA-B6-A0X1 
       32.58        12.13       176.98       127.27       131.21       186.44 
TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0BF TCGA-BH-A0BW TCGA-BH-A0BZ TCGA-BH-A0C0 
       39.55        51.68        25.68        11.67        49.05        41.75 
TCGA-BH-A0C3 TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E2 TCGA-BH-A0EE TCGA-BH-A18G 
       48.13        48.23         4.37        12.36        31.00         2.01 
TCGA-BH-A18P TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18V TCGA-C8-A137 
       30.28        55.63        37.51         7.36        51.12         0.10 
TCGA-C8-A138 TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 
        0.23         8.68         6.90         2.01         5.65         0.07 
TCGA-E2-A14P TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A152 
       16.01        22.75        22.62        17.03        19.43        19.33 
TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ 
       14.79        16.93        64.57 

$subtype2
TCGA-A1-A0SJ TCGA-A2-A04V TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU 
       14.01        63.12        78.64        75.55        63.02         5.16 
TCGA-A2-A0CV TCGA-A2-A0CW TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EO TCGA-A2-A0EV 
       61.48        57.53        24.20        16.31        71.70        17.92 
TCGA-A2-A0SU TCGA-A2-A0T5 TCGA-A2-A0YD TCGA-A2-A0YI TCGA-A7-A0CD TCGA-A7-A0CH 
       44.42        10.55        18.08        11.77         5.59         5.29 
TCGA-A7-A0DB TCGA-A7-A13F TCGA-A8-A06Z TCGA-A8-A07S TCGA-A8-A07Z TCGA-A8-A082 
        4.60         6.44         1.02         7.96        28.04        18.05 
TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G TCGA-A8-A08T TCGA-A8-A08Z 
       36.95        13.02         0.99        19.92        93.04        40.01 
TCGA-A8-A091 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09E TCGA-A8-A09W 
       19.07         9.99        12.00         1.02        30.97         0.99 
TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AJ TCGA-AN-A0FD TCGA-AN-A0FF 
        0.23         0.62         2.93         7.99         6.41         4.60 
TCGA-AN-A0FK TCGA-AN-A0FT TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XO 
        6.97         6.02         0.36         0.33         0.33        12.33 
TCGA-AN-A0XP TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AO-A03N TCGA-AO-A03P TCGA-AO-A0J3 
        0.30         0.33         0.33        54.08        84.69         9.93 
TCGA-AO-A0J7 TCGA-AO-A0JC TCGA-AO-A0JG TCGA-AO-A126 TCGA-AO-A12A TCGA-AO-A12B 
        8.55        50.86        14.76        93.70        90.54        77.56 
TCGA-AO-A12C TCGA-AO-A12G TCGA-AO-A12H TCGA-AR-A0TR TCGA-AR-A1AK TCGA-AR-A1AS 
       65.52        41.59        28.34         5.26        51.22        40.83 
TCGA-AR-A1AV TCGA-B6-A0IB TCGA-B6-A0IG TCGA-B6-A0IO TCGA-B6-A0RL TCGA-B6-A0RM 
       42.58       129.57       146.50       110.14        81.17        78.02 
TCGA-B6-A0RP TCGA-B6-A0X0 TCGA-BH-A0B1 TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BQ 
      102.77       129.70        37.74        21.70        36.72        27.16 
TCGA-BH-A0BS TCGA-BH-A0BV TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK 
       53.92        49.94        42.90        45.80        38.01        13.91 
TCGA-BH-A0DT TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0H5 TCGA-BH-A0H9 TCGA-BH-A0HA 
       38.47        44.78        24.49        35.51        41.00        28.14 
TCGA-BH-A0HK TCGA-BH-A0HL TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0W4 
        5.85         2.37        12.89        51.29        27.25         5.75 
TCGA-BH-A0W5 TCGA-BH-A18F TCGA-BH-A18N TCGA-BH-A18S TCGA-D8-A140 TCGA-D8-A145 
       17.85         8.81        37.74        66.05         0.89         1.61 
TCGA-D8-A146 TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10E 
       11.31        25.08        38.53        11.57        24.59        13.74 
TCGA-E2-A14O TCGA-E2-A14Q TCGA-E2-A14S TCGA-E2-A14W TCGA-E2-A153 TCGA-E2-A154 
       38.53        32.02        27.42        27.39        19.27        10.68 
TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15G 
       18.18        15.81        16.50        10.36        17.00        10.36 
TCGA-E2-A15H TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15P 
        1.38        15.22         1.12        10.88        12.99        10.36 
TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1BC TCGA-E2-A1BD 
       10.85         9.01         8.78        29.95         9.76        10.42 

$subtype3
TCGA-A2-A04N TCGA-A2-A04Q TCGA-A2-A0CP TCGA-A2-A0CZ TCGA-A2-A0ER TCGA-A2-A0ES 
      103.66        41.92        82.03        43.99        62.53        32.91 
TCGA-A2-A0EU TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0ST TCGA-A2-A0T3 TCGA-A2-A0T4 
       24.10        25.32        18.05        54.02        14.99        12.99 
TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YF TCGA-A2-A0YK TCGA-A2-A0YL 
       11.31        13.05        21.14         9.50        10.98         8.81 
TCGA-A2-A0YT TCGA-A7-A0CG TCGA-A7-A0D9 TCGA-A8-A06P TCGA-A8-A076 TCGA-A8-A079 
       23.77         5.46         5.23        13.02        53.95         9.01 
TCGA-A8-A07E TCGA-A8-A07F TCGA-A8-A07P TCGA-A8-A084 TCGA-A8-A08O TCGA-A8-A095 
       19.99        18.94        10.98        15.06        30.97        41.95 
TCGA-A8-A09K TCGA-A8-A0A4 TCGA-AN-A0FS TCGA-AN-A0FX TCGA-AN-A0XN TCGA-AO-A0J5 
       29.95        13.02         6.28         0.33         0.33        24.16 
TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JF TCGA-AO-A0JI TCGA-AO-A0JJ TCGA-AO-A0JM 
        9.11        41.26        11.64        38.53        49.71        60.03 
TCGA-AO-A128 TCGA-AO-A12E TCGA-AQ-A04L TCGA-AR-A0TX TCGA-AR-A0TZ TCGA-AR-A0U2 
       94.59        57.27       109.94         0.49        43.17        83.87 
TCGA-AR-A0U4 TCGA-AR-A1AJ TCGA-AR-A1AL TCGA-AR-A1AP TCGA-AR-A1AU TCGA-AR-A1AW 
       53.49        52.73        48.82        39.95        46.32        35.24 
TCGA-AR-A1AX TCGA-B6-A0I2 TCGA-B6-A0I8 TCGA-B6-A0IK TCGA-B6-A0RG TCGA-B6-A0RH 
       36.26       125.79        24.62        18.77        68.45       188.98 
TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RQ TCGA-B6-A0RT TCGA-B6-A0RV TCGA-B6-A0WX 
      172.96       162.02       140.48        89.46       157.41        21.47 
TCGA-BH-A0AU TCGA-BH-A0AV TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B4 
       24.53        38.79        25.55        28.50        46.92        39.16 
TCGA-BH-A0B5 TCGA-BH-A0B7 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BO TCGA-BH-A0BP 
       48.36        56.98        37.22        32.02        35.67        48.69 
TCGA-BH-A0BR TCGA-BH-A0BT TCGA-BH-A0C1 TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DP 
       53.65        45.57        43.99        23.44        22.13        15.65 
TCGA-BH-A0DS TCGA-BH-A0DV TCGA-BH-A0E1 TCGA-BH-A0E6 TCGA-BH-A0E9 TCGA-BH-A0EA 
        2.53        45.17        15.68         9.60        46.19        32.65 
TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0HN TCGA-BH-A0HP 
       24.43        30.15        24.56        23.05        16.96        13.61 
TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A18J TCGA-BH-A18L TCGA-BH-A18M TCGA-BH-A18U 
       28.50         5.59        20.09        26.66        72.56        51.39 
TCGA-E2-A108 TCGA-E2-A10C TCGA-E2-A14T TCGA-E2-A14V TCGA-E2-A15C TCGA-E2-A15F 
        4.08        28.04        29.26        24.59        16.31        15.39 
TCGA-E2-A15M TCGA-E2-A1B0 TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1B6 
        7.69        41.79        44.75        25.45        11.11 

subtype1 subtype2 subtype3 
    0.07     0.23     0.33 
subtype1 subtype2 subtype3 
  186.44   146.50   188.98 
subtype1 subtype2 subtype3 
  22.750   17.985   28.500 
[1] "0.1 - 186.4 (22.8)" "0.2 - 146.5 (18.0)" "0.3 - 189.0 (28.5)"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
  [7] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
 [73] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [91] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[121] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[235] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[277] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[289] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[295] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[307] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[331] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[379] "subtype2" "subtype2"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
  [7] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
 [73] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [91] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[121] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[235] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[277] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[289] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[295] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[307] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[331] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[379] "subtype2" "subtype2"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
  [7] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
 [73] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [91] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[121] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[235] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[277] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[289] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[295] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[307] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[331] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[379] "subtype2" "subtype2"
D5V2, continuous
D5V3, binary
          cls
clus         0   1
  subtype1 152   0
  subtype2 132   4
  subtype3 119   1
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  152    0
  subtype2  132    4
  subtype3  119    1
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      152      132      119
  MALE          0        4        1
D5V4, binary
          cls
clus         0   1
  subtype1  47 105
  subtype2  42  94
  subtype3  36  84
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   47  105
  subtype2   42   94
  subtype3   36   84
     clus
vv    subtype1 subtype2 subtype3
  NO        47       42       36
  YES      105       94       84
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 143   8   1
  subtype2        0 129   3   4
  subtype3        1 114   3   2
D5V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3C NX
  subtype1 41       2      27 24  14   3   0    4 11  11  4   7   1  3
  subtype2 31       6      28 10  35   4   1    3  7   3  2   4   0  2
  subtype3 28       5      24 14  14   1   0    5  9  11  3   4   0  2
D5V6, multiclass
D5V7, continuous
D5V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1       6        8        0        55        36         24          2
  subtype2      11       13        1        46        38         14          6
  subtype3      13       10        3        36        20         24          5
          vv
clus       STAGE IIIC STAGE IV STAGE X
  subtype1         10        8       3
  subtype2          1        3       3
  subtype3          4        3       2
D5V9, multiclass

Clustering(6) Variable = RPPA_CHIERARCHICAL
D6V1, survival
          sevent
clus2        0   1
  subtype1 135  17
  subtype2 102  10
  subtype3  99  17
subtype1 subtype2 subtype3 
     152      112      116 
subtype1 subtype2 subtype3 
      17       10       17 
$subtype1
TCGA-A1-A0SH TCGA-A2-A04V TCGA-A2-A04Y TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT 
       47.24        63.12        25.08        78.64        75.55        63.02 
TCGA-A2-A0CU TCGA-A2-A0CV TCGA-A2-A0CW TCGA-A2-A0CY TCGA-A2-A0D3 TCGA-A2-A0D4 
        5.16        61.48        57.53        42.35        24.20        16.31 
TCGA-A2-A0EO TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0T5 TCGA-A2-A0YD TCGA-A2-A0YH 
       71.70        27.12        44.84        10.55        18.08        12.46 
TCGA-A7-A0CD TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0DB TCGA-A7-A13F TCGA-A8-A06R 
        5.59         5.29         6.18         4.60         6.44        17.95 
TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A07S TCGA-A8-A07W 
       29.00        31.00        26.01         1.02         7.96         9.99 
TCGA-A8-A07Z TCGA-A8-A082 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G 
       28.04        18.05        36.95        13.02         0.99        19.92 
TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A091 TCGA-A8-A099 TCGA-A8-A09A TCGA-A8-A09C 
       93.04        40.01        19.07         9.99         9.99         1.02 
TCGA-A8-A09E TCGA-A8-A09M TCGA-A8-A09R TCGA-A8-A09W TCGA-A8-A0A4 TCGA-AN-A04A 
       30.97        15.02         8.98         0.99        13.02         2.93 
TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FF 
        7.99         7.33         0.16         0.30         6.41         4.60 
TCGA-AN-A0FK TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XO TCGA-AN-A0XP 
        6.97         0.36         0.33         0.33        12.33         0.30 
TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A03N 
        0.33         0.33         5.59        80.28        47.84        54.08 
TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A0J3 TCGA-AO-A0J7 TCGA-AO-A0JB TCGA-AO-A0JC 
       81.63        84.69         9.93         8.55        37.81        50.86 
TCGA-AO-A0JD TCGA-AO-A0JG TCGA-AO-A0JJ TCGA-AO-A126 TCGA-AO-A12A TCGA-AO-A12B 
       59.61        14.76        49.71        93.70        90.54        77.56 
TCGA-AO-A12E TCGA-AO-A12G TCGA-AO-A12H TCGA-AR-A0TR TCGA-AR-A0TT TCGA-AR-A0TV 
       57.27        41.59        28.34         5.26        55.20        29.72 
TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0U3 TCGA-AR-A1AP TCGA-AR-A1AS TCGA-AR-A1AV 
       24.30        55.86        74.40        39.95        40.83        42.58 
TCGA-B6-A0IB TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RP TCGA-B6-A0X0 TCGA-BH-A0BF 
      129.57        81.17        78.02       102.77       129.70        25.68 
TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BV TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0C3 
       27.16        53.92        49.94        49.05        41.75        48.13 
TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0DT TCGA-BH-A0E2 
       42.90        45.80        38.01        13.91        38.47        12.36 
TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0H5 TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HK 
       44.78        24.49        35.51        41.00        28.14         5.85 
TCGA-BH-A0HL TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0W4 TCGA-BH-A0W5 
        2.37        12.89        51.29        27.25         5.75        17.85 
TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-D8-A13Y TCGA-D8-A140 TCGA-D8-A146 
       37.74        30.28        66.05         8.68         0.89        11.31 
TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10E TCGA-E2-A14Q 
       25.08        38.53        11.57        24.59        13.74        32.02 
TCGA-E2-A14S TCGA-E2-A14W TCGA-E2-A14Z TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 
       27.42        27.39        17.03        19.27        10.68        18.18 
TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15G TCGA-E2-A15J 
       15.81        16.50        10.36        17.00        10.36        15.22 
TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T 
        1.12        10.88        12.99        10.85         9.01         8.78 
TCGA-E2-A1B4 TCGA-E2-A1BD 
       29.95        10.42 

$subtype2
TCGA-A1-A0SJ TCGA-A2-A04N TCGA-A2-A04Q TCGA-A2-A0CP TCGA-A2-A0CZ TCGA-A2-A0ER 
       14.01       103.66        41.92        82.03        43.99        62.53 
TCGA-A2-A0ES TCGA-A2-A0EU TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0SU 
       32.91        24.10        17.92        25.32        18.05        44.42 
TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YF 
       14.99        12.99        11.31        13.05        21.14         9.50 
TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A0YT TCGA-A7-A0CG TCGA-A7-A0D9 
       11.77        10.98         8.81        23.77         5.46         5.23 
TCGA-A8-A06P TCGA-A8-A079 TCGA-A8-A07E TCGA-A8-A07F TCGA-A8-A07P TCGA-A8-A084 
       13.02         9.01        19.99        18.94        10.98        15.06 
TCGA-A8-A08O TCGA-A8-A095 TCGA-A8-A09B TCGA-A8-A09K TCGA-AN-A041 TCGA-AN-A049 
       30.97        41.95        12.00        29.95         0.23         0.62 
TCGA-AN-A0FS TCGA-AN-A0XN TCGA-AO-A0J5 TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JF 
        6.28         0.33        24.16         9.11        41.26        11.64 
TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A12C TCGA-AQ-A04L TCGA-AR-A0TZ TCGA-AR-A1AK 
       38.53        60.03        65.52       109.94        43.17        51.22 
TCGA-AR-A1AL TCGA-AR-A1AU TCGA-AR-A1AW TCGA-AR-A1AX TCGA-B6-A0I2 TCGA-B6-A0I8 
       48.82        46.32        35.24        36.26       125.79        24.62 
TCGA-B6-A0IG TCGA-B6-A0IK TCGA-B6-A0IO TCGA-B6-A0RG TCGA-B6-A0RN TCGA-B6-A0RO 
      146.50        18.77       110.14        68.45       172.96       162.02 
TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-BH-A0AU TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 
      140.48       157.41        24.53        25.55        28.50        46.92 
TCGA-BH-A0B1 TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BJ 
       37.74        39.16        48.36        37.22        32.02        21.70 
TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BR TCGA-BH-A0BT TCGA-BH-A0C1 
       36.72        35.67        48.69        53.65        45.57        43.99 
TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DP TCGA-BH-A0DS TCGA-BH-A0DV TCGA-BH-A0E1 
       23.44        22.13        15.65         2.53        45.17        15.68 
TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0H6 TCGA-BH-A0H7 
       46.19        32.65        24.43        30.15        24.56        23.05 
TCGA-BH-A0HN TCGA-BH-A0HP TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A18F TCGA-BH-A18J 
       16.96        13.61        28.50         5.59         8.81        20.09 
TCGA-BH-A18L TCGA-BH-A18M TCGA-BH-A18U TCGA-D8-A145 TCGA-E2-A108 TCGA-E2-A10C 
       26.66        72.56        51.39         1.61         4.08        28.04 
TCGA-E2-A14O TCGA-E2-A14T TCGA-E2-A15C TCGA-E2-A15F TCGA-E2-A15M TCGA-E2-A15P 
       38.53        29.26        16.31        15.39         7.69        10.36 
TCGA-E2-A1B0 TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1BC 
       41.79        44.75        25.45         9.76 

$subtype3
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04W 
       31.79        28.01        17.98        64.11        22.03        63.06 
TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 
       60.07        24.79        42.84        21.14        25.84        25.02 
TCGA-A2-A0EQ TCGA-A2-A0EY TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T1 
       67.50        15.95        54.02        42.35        11.08        10.59 
TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YG TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A7-A0CE 
        7.96         8.28        13.28        10.72        21.73         8.32 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A07I 
       12.26         8.78         9.44        17.00        53.95        14.01 
TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A08X 
        9.99         8.98        37.05         9.99        30.97        33.99 
TCGA-A8-A09I TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AR 
       33.07        14.01         0.99         1.71         6.48         0.30 
TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AN-A0FX 
        0.33         7.92         7.56         6.02         0.33         0.33 
TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J6 TCGA-AO-A0JE 
        0.53         0.33        59.05        19.23        25.48        64.60 
TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F 
       43.36       102.54        94.59        96.10        64.04        48.36 
TCGA-AR-A0TP TCGA-AR-A0TQ TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0TX TCGA-AR-A0U0 
       78.64        49.32        37.41        11.84         0.49         0.26 
TCGA-AR-A0U1 TCGA-AR-A0U2 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ 
        6.08        83.87        53.49        75.55        61.84        52.73 
TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AT TCGA-AR-A1AY TCGA-B6-A0I6 TCGA-B6-A0I9 
       43.53        43.04        41.82        20.19        32.58        12.13 
TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RH TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX 
      176.98       127.27       188.98        89.46       131.21        21.47 
TCGA-B6-A0X1 TCGA-BH-A0AV TCGA-BH-A0B3 TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BW 
      186.44        38.79        39.55        56.98        51.68        11.67 
TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A18G TCGA-BH-A18Q 
       48.23         4.37         9.60        31.00         2.01        55.63 
TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18V TCGA-C8-A137 TCGA-C8-A138 TCGA-D8-A13Z 
       37.51         7.36        51.12         0.10         0.23         6.90 
TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-E2-A14P TCGA-E2-A14V TCGA-E2-A14X 
        2.01         5.65         0.07        16.01        24.59        22.75 
TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A152 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A15H 
       22.62        19.43        19.33        14.79        16.93         1.38 
TCGA-E2-A1AZ TCGA-E2-A1B6 
       64.57        11.11 

subtype1 subtype2 subtype3 
    0.16     0.23     0.07 
subtype1 subtype2 subtype3 
  129.70   172.96   188.98 
subtype1 subtype2 subtype3 
   24.25    25.50    21.88 
[1] "0.2 - 129.7 (24.2)" "0.2 - 173.0 (25.5)" "0.1 - 189.0 (21.9)"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [61] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [85] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[223] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[241] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[265] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[325] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[331] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[337] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[349] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[361] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[373] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[379] "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [61] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [85] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[223] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[241] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[265] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[325] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[331] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[337] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[349] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[361] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[373] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[379] "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [61] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [85] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[223] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[241] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[265] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[325] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[331] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[337] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[349] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[361] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[373] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[379] "subtype2" "subtype1"
D6V2, continuous
D6V3, binary
          cls
clus         0   1
  subtype1 159   4
  subtype2 114   1
  subtype3 130   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  159    4
  subtype2  114    1
  subtype3  130    0
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      159      114      130
  MALE          4        1        0
D6V4, binary
          cls
clus         0   1
  subtype1  48 115
  subtype2  36  79
  subtype3  41  89
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   48  115
  subtype2   36   79
  subtype3   41   89
     clus
vv    subtype1 subtype2 subtype3
  NO        48       36       41
  YES      115       79       89
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 153   6   4
  subtype2        1 109   3   2
  subtype3        0 124   5   1
D6V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3C NX
  subtype1 42       5      31 14  33   3   1    4 13   6  2   5   0  4
  subtype2 22       6      23 11  20   1   0    5  7  11  3   4   0  2
  subtype3 36       2      25 23  10   4   0    3  7   8  4   6   1  1
D6V6, multiclass
D6V7, continuous
D6V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1      14       12        1        52        42         23          7
  subtype2      11       12        3        31        21         23          5
  subtype3       5        7        0        54        31         16          1
          vv
clus       STAGE IIIC STAGE IV STAGE X
  subtype1          2        6       4
  subtype2          4        3       2
  subtype3          9        5       2
D6V9, multiclass

Clustering(7) Variable = MRNASEQ_CNMF
D7V1, survival
          sevent
clus2        0   1
  subtype1 188  33
  subtype2 138  12
  subtype3 359  49
subtype1 subtype2 subtype3 
     221      150      408 
subtype1 subtype2 subtype3 
      33       12       49 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q 
        8.52        31.79        28.01        19.17        17.98        41.92 
TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04W TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0D0 
       64.11        22.03        63.06        24.79        42.84        21.14 
TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 
       25.84        25.02        67.50        54.02        42.35        11.08 
TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0T7 TCGA-A2-A0YE TCGA-A2-A0YG TCGA-A2-A0YJ 
       10.59         7.96        13.05         8.28        13.28        10.72 
TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A2-A25F TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D 
       21.73        12.20         3.72         8.32        12.26         8.78 
TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I TCGA-A8-A06R TCGA-A8-A06U 
        9.44         8.45         6.87         4.01        17.95        29.00 
TCGA-A8-A07B TCGA-A8-A07C TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08B 
       33.01        19.07         9.99         8.98         9.96        23.08 
TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A09X TCGA-A8-A0A7 
        9.99        30.97         0.99        33.99        14.01         0.99 
TCGA-AC-A23H TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AL 
        2.66        38.53         1.02         1.78         1.71         6.48 
TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FV 
        0.16         0.30         0.33         7.92         7.56         0.33 
TCGA-AN-A0FX TCGA-AN-A0G0 TCGA-AN-A0XN TCGA-AN-A0XU TCGA-AO-A03M TCGA-AO-A03O 
        0.33         0.53         0.33         0.33        47.84        81.63 
TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JD TCGA-AO-A0JE 
       59.05        19.23         9.67        25.48        59.61        64.60 
TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F 
       43.36       102.54        94.59        96.10        64.04        48.36 
TCGA-AO-A1KR TCGA-AQ-A04J TCGA-AQ-A04L TCGA-AR-A0TP TCGA-AR-A0TS TCGA-AR-A0TT 
       70.36         5.23       109.94        78.64        37.41        55.20 
TCGA-AR-A0TU TCGA-AR-A0TX TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U4 TCGA-AR-A1AH 
       11.84         0.49         0.26         6.08        53.49        75.55 
TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY 
       61.84        52.73        43.53        43.04        17.19        20.19 
TCGA-AR-A24Q TCGA-AR-A24U TCGA-AR-A251 TCGA-AR-A254 TCGA-AR-A256 TCGA-AR-A2LR 
       66.02        53.36        45.14        39.85        93.83        20.38 
TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0I9 TCGA-B6-A0IJ TCGA-B6-A0IK 
       77.62       125.79        32.58        12.13       176.98        18.77 
TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RH TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU 
      127.27       211.53       188.98       100.67        89.46       131.21 
TCGA-B6-A0WX TCGA-B6-A0X1 TCGA-B6-A1KF TCGA-B6-A1KN TCGA-BH-A0AV TCGA-BH-A0AW 
       21.47       186.44       101.52       109.48        38.79        20.45 
TCGA-BH-A0B3 TCGA-BH-A0B7 TCGA-BH-A0BF TCGA-BH-A0BG TCGA-BH-A0BL TCGA-BH-A0BW 
       39.55        56.98        25.68        24.85        44.02        11.67 
TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0DL TCGA-BH-A0DZ TCGA-BH-A0E0 TCGA-BH-A0E6 
       49.05        41.75        48.23        16.27         4.37         9.60 
TCGA-BH-A0EE TCGA-BH-A0GY TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18Q 
       31.00        30.15         5.59        12.23         2.01        55.63 
TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18V TCGA-BH-A1EN TCGA-BH-A1EX TCGA-BH-A1F0 
       37.51         7.36        51.12        67.46        49.58        25.81 
TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FN TCGA-BH-A1FU TCGA-BH-A202 TCGA-BH-A203 
       97.48       114.12        72.07        72.07         0.72        38.60 
TCGA-BH-A208 TCGA-BH-A209 TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HJ TCGA-C8-A1HK 
       57.83       130.16         0.10         0.23         0.16         0.23 
TCGA-C8-A1HM TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A275 TCGA-C8-A278 TCGA-C8-A27B 
        0.20         0.36         0.43         0.03         0.03         0.99 
TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1J8 
        8.68         6.90         2.01         5.65         0.07         8.42 
TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL 
        8.15         0.59         3.16         6.15         3.58         8.71 
TCGA-D8-A1JM TCGA-D8-A1XJ TCGA-D8-A1XK TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW 
        7.82        11.57        10.72         5.82         6.35         3.85 
TCGA-D8-A1Y3 TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M TCGA-E2-A14N TCGA-E2-A14P 
        4.08         7.46         4.60         4.73        44.38        16.01 
TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A152 TCGA-E2-A158 
       27.78        22.75        22.62        19.43        19.33        14.79 
TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1II TCGA-E2-A1LB TCGA-E2-A1LG 
       16.93        64.57        41.79        27.95        31.96        11.51 
TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1RH 
       94.52        90.41         8.75        33.34         7.86         0.46 
TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A248 TCGA-EW-A1OV TCGA-EW-A1OW TCGA-EW-A1P4 
        1.41         0.66         0.69        17.16        15.22        16.47 
TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PC TCGA-EW-A1PH TCGA-EW-A2FR 
       20.88         7.86        19.99         6.12         4.57        36.82 
TCGA-GI-A2C9 TCGA-GM-A2DB TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DH 
       23.11        53.10        43.04        42.71        42.28 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SH TCGA-A1-A0SJ TCGA-A2-A0CL 
       14.37        43.40        48.10        47.24        14.01        60.07 
TCGA-A2-A0CP TCGA-A2-A0CV TCGA-A2-A0CZ TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0ES 
       82.03        61.48        43.99        82.68        71.70        32.91 
TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0SY TCGA-A2-A0T6 TCGA-A2-A0YD TCGA-A2-A0YI 
       25.32        18.05        37.94        11.31        18.08        11.77 
TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1FZ TCGA-A2-A1G0 TCGA-A2-A1G6 TCGA-A2-A259 
       10.98         8.81        13.45        12.49         4.34        42.25 
TCGA-A2-A25A TCGA-A2-A25D TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A7-A0CG TCGA-A7-A0DB 
       97.58         7.99        11.93        26.40         5.46         4.60 
TCGA-A7-A3J1 TCGA-A8-A07E TCGA-A8-A08O TCGA-A8-A09A TCGA-A8-A0A4 TCGA-A8-A0A6 
        2.47        19.99        30.97         9.99        13.02        21.04 
TCGA-AC-A23G TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FO 
       10.82         1.45        55.40        36.99        38.79        50.70 
TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0XL TCGA-AO-A03R 
        0.69         1.15         7.17         6.28         0.33        56.12 
TCGA-AO-A0J9 TCGA-AO-A0JC TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JJ TCGA-AO-A12A 
       41.26        50.86        11.64        14.76        49.71        90.54 
TCGA-AO-A12E TCGA-AO-A1KO TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AU TCGA-AR-A1AX 
       57.27        14.73        51.22        48.82        46.32        36.26 
TCGA-AR-A24O TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A252 TCGA-AR-A255 TCGA-AR-A2LH 
       65.65        53.26        50.96        40.64        34.78        20.22 
TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO TCGA-AR-A2LQ TCGA-B6-A0IE TCGA-B6-A0IH 
       40.01        17.06        20.81        16.96        65.69       112.37 
TCGA-B6-A0IP TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-B6-A0WY TCGA-B6-A0X7 TCGA-BH-A0AZ 
      110.93       140.48       157.41       113.75        58.88        28.50 
TCGA-BH-A0B0 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BO 
       46.92        37.22        32.02        21.70        36.72        35.67 
TCGA-BH-A0BP TCGA-BH-A0BQ TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DI 
       48.69        27.16        48.13        31.17        23.44        22.13 
TCGA-BH-A0DK TCGA-BH-A0DO TCGA-BH-A0DP TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX 
       13.91        17.26        15.65        38.47        45.17        47.41 
TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A0HF TCGA-BH-A0HK 
       46.19        32.65        37.78        35.51        23.90         5.85 
TCGA-BH-A0HP TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A18F TCGA-BH-A18I TCGA-BH-A18M 
       13.61         5.75        17.85         8.81         7.23        72.56 
TCGA-BH-A1EU TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FH TCGA-BH-A201 TCGA-D8-A145 
       42.28       120.62        74.73        36.92         6.87         1.61 
TCGA-D8-A146 TCGA-D8-A1JH TCGA-D8-A1JU TCGA-D8-A1XM TCGA-D8-A27I TCGA-D8-A27K 
       11.31         9.34         3.48         7.17         6.08         3.88 
TCGA-D8-A27P TCGA-D8-A27V TCGA-E2-A108 TCGA-E2-A14Q TCGA-E2-A14Z TCGA-E2-A15E 
        0.72         2.40         4.08        32.02        17.03        17.00 
TCGA-E2-A15M TCGA-E2-A15P TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1BC TCGA-E2-A1IF 
        7.69        10.36        44.75        25.45         9.76        31.43 
TCGA-E2-A1IJ TCGA-E2-A1IO TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A3DX TCGA-E9-A227 
       23.84        14.73         4.18        43.13         7.13         0.79 
TCGA-E9-A2JT TCGA-EW-A1IW TCGA-EW-A1J2 TCGA-EW-A1PD TCGA-EW-A1PF TCGA-EW-A1PG 
        0.76         8.28         4.57         5.72         4.57        28.77 
TCGA-EW-A2FS TCGA-EW-A2FV TCGA-GM-A2DA TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DN 
       38.56         7.82       194.27        61.91        62.33        77.33 

$subtype3
TCGA-A1-A0SG TCGA-A1-A0SI TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04N 
       14.24        20.84         7.96        39.32        18.18       103.66 
TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A04X TCGA-A2-A04Y TCGA-A2-A0CQ TCGA-A2-A0CS 
       77.72        63.12        44.35        25.08        78.64        75.55 
TCGA-A2-A0CT TCGA-A2-A0CU TCGA-A2-A0CW TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM 
       63.02         5.16        57.53        24.20        16.31        90.64 
TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0EV TCGA-A2-A0EY TCGA-A2-A0SU 
       62.53        26.53        24.10        17.92        15.95        44.42 
TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T5 TCGA-A2-A0YC 
       27.12        44.84        14.99        12.99        10.55        21.14 
TCGA-A2-A0YF TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW TCGA-A2-A1FX 
        9.50        12.46        23.77        15.12         7.27        30.74 
TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25E TCGA-A7-A0CD TCGA-A7-A0CH 
       12.23         8.48         9.37        82.55         5.59         5.29 
TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A13F TCGA-A7-A13G TCGA-A7-A26E TCGA-A7-A26H 
        6.18         5.23         6.44         6.84        13.84         2.10 
TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3IY TCGA-A7-A3IZ TCGA-A7-A3J0 TCGA-A8-A06O 
        2.20         5.95         4.96         4.87         2.50        13.02 
TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06T TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z 
       13.02         1.02        41.06        31.00        26.01         1.02 
TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07F TCGA-A8-A07G TCGA-A8-A07I 
       17.00        53.95         9.01        18.94        18.94        14.01 
TCGA-A8-A07J TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S TCGA-A8-A07W TCGA-A8-A082 
       12.00        17.00        10.98         7.96         9.99        18.05 
TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08C TCGA-A8-A08F TCGA-A8-A08G 
       15.06        36.95        13.02        19.96        18.05        19.92 
TCGA-A8-A08I TCGA-A8-A08J TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A091 
       12.00        37.05        19.07        93.04        40.01        19.07 
TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A097 TCGA-A8-A099 TCGA-A8-A09B 
       17.03        17.92        41.95        12.00         9.99        12.00 
TCGA-A8-A09C TCGA-A8-A09D TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N 
        1.02        13.02        33.07        29.95        15.02         1.02 
TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A09W TCGA-A8-A0A1 
       25.02         8.98        19.00        15.02         0.99        12.00 
TCGA-A8-A0A2 TCGA-A8-A0A9 TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AC-A23C TCGA-AC-A23E 
       19.00        13.02        17.00        38.04         0.95         2.37 
TCGA-AC-A2B8 TCGA-AC-A2BM TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A046 
        1.45        38.20         0.33         0.33         0.23         0.33 
TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0FD TCGA-AN-A0FF 
        0.62         2.93         7.99         7.33         6.41         4.60 
TCGA-AN-A0FK TCGA-AN-A0FT TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XO 
        6.97         6.02         0.36         0.33         0.33        12.33 
TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AN-A0XV TCGA-AN-A0XW 
        0.30         0.33         0.33         0.33         5.33         5.59 
TCGA-AO-A03L TCGA-AO-A03N TCGA-AO-A03P TCGA-AO-A03T TCGA-AO-A03V TCGA-AO-A0J3 
       80.28        54.08        84.69        39.02        29.13         9.93 
TCGA-AO-A0J5 TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0JA TCGA-AO-A0JI TCGA-AO-A0JM 
       24.16         8.55         9.11        11.38        38.53        60.03 
TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12G TCGA-AO-A12H 
       99.22        93.70        77.56        65.52        41.59        28.34 
TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A0Y5 
       82.62        49.94         0.53        17.79        14.43         5.62 
TCGA-AQ-A1H2 TCGA-AQ-A1H3 TCGA-AR-A0TQ TCGA-AR-A0TR TCGA-AR-A0TV TCGA-AR-A0TW 
        7.56         4.54        49.32         5.26        29.72        24.30 
TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A1AN TCGA-AR-A1AP 
       55.86        43.17        83.87        74.40        43.69        39.95 
TCGA-AR-A1AS TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A24H TCGA-AR-A24K TCGA-AR-A24L 
       40.83        42.58        35.24       109.58        50.89        73.02 
TCGA-AR-A24M TCGA-AR-A24N TCGA-AR-A24P TCGA-AR-A24R TCGA-AR-A24S TCGA-AR-A24V 
       65.42        68.19         0.85        57.37        62.07        54.18 
TCGA-AR-A24X TCGA-AR-A24Z TCGA-AR-A250 TCGA-AR-A2LE TCGA-AR-A2LK TCGA-AR-A2LL 
       48.16        51.75        56.12       128.65        42.84         7.33 
TCGA-B6-A0I5 TCGA-B6-A0I8 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IG 
      149.56        24.62       220.87       129.57        50.70       146.50 
TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0RG TCGA-B6-A0RI TCGA-B6-A0RL 
      126.12        84.59       110.14        68.45       223.40        81.17 
TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0WS TCGA-B6-A0WT 
       78.02       172.96       162.02       102.77        97.48       177.40 
TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 
       79.63        17.95       129.57       129.70        28.24        68.94 
TCGA-B6-A1KC TCGA-B6-A1KI TCGA-B6-A2IU TCGA-BH-A0AU TCGA-BH-A0AY TCGA-BH-A0B1 
       43.59        48.10       159.12        24.53        25.55        37.74 
TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0B8 TCGA-BH-A0BD TCGA-BH-A0BR TCGA-BH-A0BS 
       39.16        48.36        51.58        18.21        53.65        53.92 
TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0C1 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH 
       45.57        49.94        43.99        42.90        45.80        38.01 
TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0E1 TCGA-BH-A0E2 TCGA-BH-A0E7 TCGA-BH-A0EB 
        3.22         2.53        15.68        12.36        44.78        24.49 
TCGA-BH-A0EI TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0H9 
       24.43        10.78        15.16        24.56        23.05        41.00 
TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HI TCGA-BH-A0HO TCGA-BH-A0HQ TCGA-BH-A0HU 
       28.14        26.50        20.35         2.50        36.85        12.89 
TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A0W7 TCGA-BH-A18J 
       51.29        27.25        28.50         5.92        18.35        20.09 
TCGA-BH-A18K TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-BH-A18U 
       90.81        26.66        37.74        30.28        66.05        51.39 
TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EV TCGA-BH-A1EW TCGA-BH-A1EY 
       91.99       113.82        82.85        12.00        55.69        17.69 
TCGA-BH-A1F2 TCGA-BH-A1F5 TCGA-BH-A1F8 TCGA-BH-A1FD TCGA-BH-A1FG TCGA-BH-A1FJ 
       31.53        89.16        24.62        33.14       122.89        63.35 
TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FR TCGA-BH-A204 TCGA-BH-A28Q TCGA-C8-A1HI 
       55.00        45.63       144.59        83.31         6.44         0.07 
TCGA-C8-A1HL TCGA-C8-A1HN TCGA-C8-A26V TCGA-C8-A26W TCGA-C8-A26Z TCGA-C8-A273 
        0.07         0.07         0.30         0.23         0.13         0.20 
TCGA-C8-A274 TCGA-C8-A27A TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A1JC TCGA-D8-A1JD 
        0.03        12.20         0.89         3.72         5.85         8.98 
TCGA-D8-A1JE TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1JP TCGA-D8-A1JS 
        1.87         0.69         9.01         7.13         5.49         3.45 
TCGA-D8-A1JT TCGA-D8-A1X5 TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1X9 
        4.04         5.62         7.76         2.79         8.94        12.49 
TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XG 
        9.01         6.61         2.66         5.10         6.48         6.44 
TCGA-D8-A1XL TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XU TCGA-D8-A1XV 
       10.49         7.96         5.52         0.59         4.90         4.80 
TCGA-D8-A1XY TCGA-D8-A1XZ TCGA-D8-A1Y0 TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A27E 
        2.66         3.95         5.46         3.78         2.37         5.98 
TCGA-D8-A27G TCGA-D8-A27L TCGA-D8-A27N TCGA-D8-A27R TCGA-D8-A27T TCGA-D8-A27W 
        6.87         4.11         4.77         2.96         4.44         0.49 
TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10C 
       38.24        51.12        38.53        11.57        24.59        28.04 
TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A14O TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14V 
       13.74        11.84        38.53        27.42        29.26        24.59 
TCGA-E2-A14W TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A 
       27.39        19.27        10.68        18.18        15.81        16.50 
TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15I TCGA-E2-A15J 
       16.31        10.36        10.36         1.38        13.51        15.22 
TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A1B4 
        1.12        10.88        12.99        10.85         9.01        29.95 
TCGA-E2-A1BD TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IH TCGA-E2-A1IK TCGA-E2-A1IL 
       10.42        32.32        24.82        21.63        17.03         0.46 
TCGA-E2-A1IN TCGA-E2-A1L7 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E9-A1R2 
       12.89        20.81        33.37        12.76        15.22         0.62 
TCGA-E9-A1R3 TCGA-E9-A1R4 TCGA-E9-A1R5 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RB 
        2.10         0.95         1.38         2.76         1.12         0.69 
TCGA-E9-A1RC TCGA-E9-A1RD TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RI TCGA-E9-A226 
       40.37         0.66         1.55         1.25         1.58         0.53 
TCGA-E9-A245 TCGA-E9-A247 TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A295 TCGA-E9-A2JS 
        0.82         0.39         0.92         0.33         0.69         0.43 
TCGA-E9-A3HO TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1J1 TCGA-EW-A1J3 TCGA-EW-A1J5 
        0.62        35.57         8.48         9.27         8.28         7.46 
TCGA-EW-A1J6 TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ TCGA-EW-A1P0 TCGA-EW-A1P3 
       19.56        18.48        19.50        30.94        36.85        32.45 
TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PA TCGA-EW-A1PE TCGA-EW-A2FW TCGA-GI-A2C8 
       12.00        10.26         8.78         3.48         6.25         6.97 
TCGA-GM-A2D9 TCGA-GM-A2DC TCGA-GM-A2DL TCGA-GM-A2DM TCGA-GM-A2DO TCGA-GM-A3NY 
       59.57        53.52        90.81        76.64        53.33        24.43 

subtype1 subtype2 subtype3 
    0.03     0.33     0.03 
subtype1 subtype2 subtype3 
  211.53   194.27   223.40 
subtype1 subtype2 subtype3 
  19.330   25.385   17.015 
[1] "0.0 - 211.5 (19.3)" "0.3 - 194.3 (25.4)" "0.0 - 223.4 (17.0)"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [13] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
 [19] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
 [25] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
 [31] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [37] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
 [43] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
 [49] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
 [55] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
 [61] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [67] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
 [73] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
 [79] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
 [85] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [91] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
 [97] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[109] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[121] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[133] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[139] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[163] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[169] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[175] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[181] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[193] "subtype2" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[205] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[211] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[217] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[223] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[229] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[235] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[241] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[247] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[253] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[259] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[265] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[271] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[277] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[283] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[289] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[295] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[301] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[307] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[313] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[319] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
[325] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[331] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[337] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[343] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[349] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[355] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[361] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[367] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[373] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[379] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[385] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[391] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[397] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[403] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[409] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[415] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[421] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype2"
[427] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[433] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[439] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[445] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[451] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[457] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[463] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[469] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[475] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[481] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[487] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[493] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[499] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[505] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[511] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[517] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[523] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[529] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[535] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[541] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[547] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[553] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[559] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[565] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[571] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[577] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[583] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[589] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[595] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[601] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[607] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[613] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[619] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[625] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[631] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[637] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[643] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[649] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[655] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[661] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[667] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[673] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[679] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[685] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[691] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[697] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[703] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[709] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[715] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[721] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[727] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[733] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[739] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[745] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[751] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[757] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[763] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[769] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[775] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [13] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
 [19] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
 [25] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
 [31] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [37] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
 [43] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
 [49] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
 [55] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
 [61] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [67] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
 [73] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
 [79] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
 [85] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [91] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
 [97] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[109] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[121] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[133] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[139] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[163] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[169] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[175] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[181] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[193] "subtype2" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[205] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[211] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[217] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[223] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[229] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[235] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[241] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[247] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[253] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[259] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[265] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[271] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[277] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[283] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[289] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[295] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[301] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[307] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[313] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[319] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
[325] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[331] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[337] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[343] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[349] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[355] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[361] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[367] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[373] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[379] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[385] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[391] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[397] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[403] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[409] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[415] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[421] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype2"
[427] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[433] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[439] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[445] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[451] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[457] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[463] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[469] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[475] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[481] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[487] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[493] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[499] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[505] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[511] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[517] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[523] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[529] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[535] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[541] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[547] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[553] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[559] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[565] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[571] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[577] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[583] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[589] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[595] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[601] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[607] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[613] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[619] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[625] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[631] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[637] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[643] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[649] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[655] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[661] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[667] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[673] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[679] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[685] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[691] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[697] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[703] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[709] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[715] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[721] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[727] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[733] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[739] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[745] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[751] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[757] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[763] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[769] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[775] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [13] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
 [19] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
 [25] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
 [31] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [37] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
 [43] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
 [49] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
 [55] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
 [61] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [67] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
 [73] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
 [79] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
 [85] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [91] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
 [97] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[109] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[121] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[133] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[139] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[163] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[169] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[175] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[181] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[193] "subtype2" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[205] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[211] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[217] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[223] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[229] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[235] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[241] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[247] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[253] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[259] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[265] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[271] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[277] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[283] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[289] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[295] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[301] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[307] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[313] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[319] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
[325] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[331] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[337] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[343] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[349] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[355] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[361] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[367] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[373] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[379] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[385] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[391] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[397] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[403] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[409] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[415] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[421] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype2"
[427] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[433] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[439] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[445] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[451] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[457] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[463] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[469] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[475] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[481] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[487] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[493] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[499] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[505] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[511] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[517] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[523] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[529] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[535] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[541] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[547] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[553] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[559] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[565] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[571] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[577] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[583] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[589] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[595] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[601] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[607] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[613] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[619] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[625] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[631] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[637] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[643] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[649] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[655] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[661] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[667] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[673] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[679] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[685] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[691] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[697] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[703] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[709] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[715] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[721] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[727] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[733] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[739] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[745] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[751] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[757] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[763] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[769] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[775] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
D7V2, continuous
D7V3, binary
          cls
clus         0   1
  subtype1 239   0
  subtype2 155   1
  subtype3 433   8
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  239    0
  subtype2  155    1
  subtype3  433    8
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      239      155      433
  MALE          0        1        8
D7V4, binary
          cls
clus         0   1
  subtype1  58 181
  subtype2  45 111
  subtype3 101 340
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   58  181
  subtype2   45  111
  subtype3  101  340
     clus
vv    subtype1 subtype2 subtype3
  NO        58       45      101
  YES      181      111      340
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 220   4  15
  subtype2        2 136   2  16
  subtype3        0 392   9  40
D7V5, multiclass
          vv
clus        N0 N0 (I+) N0 (I-) N0 (MOL+)  N1 N1A N1B N1C N1MI  N2 N2A  N3 N3A
  subtype1  75       6      44         0  34  24   8   1    4  14  12   3   8
  subtype2  44       8      24         1  15  25   6   0    6   4   8   5   8
  subtype3 121       8      61         0  52  75  18   1   12  32  30   9  13
          vv
clus       N3B N3C  NX
  subtype1   1   1   4
  subtype2   0   0   2
  subtype3   0   0   9
D7V6, multiclass
D7V7, continuous
D7V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      14       16        1        2       101        51         0
  subtype2      21       15        2        5        42        34         1
  subtype3      34       31        5        1       147       100         1
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         30          3         12        4         0       4
  subtype2         20          0         10        2         1       3
  subtype3         68         20         15        9         0      10
D7V9, multiclass

Clustering(8) Variable = MRNASEQ_CHIERARCHICAL
D8V1, survival
          sevent
clus2        0   1
  subtype1 338  47
  subtype2 192  19
  subtype3 155  28
subtype1 subtype2 subtype3 
     385      211      183 
subtype1 subtype2 subtype3 
      47       19       28 
$subtype1
TCGA-A1-A0SG TCGA-A1-A0SH TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04N 
       14.24        47.24         7.96        39.32        18.18       103.66 
TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CU TCGA-A2-A0CW 
       77.72        63.12        78.64        75.55         5.16        57.53 
TCGA-A2-A0CX TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0ER TCGA-A2-A0ET 
       42.84        24.20        16.31        90.64        62.53        26.53 
TCGA-A2-A0SV TCGA-A2-A0T5 TCGA-A2-A0YC TCGA-A2-A0YF TCGA-A2-A0YG TCGA-A2-A0YH 
       27.12        10.55        21.14         9.50        13.28        12.46 
TCGA-A2-A0YI TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FX TCGA-A2-A1G4 TCGA-A2-A25B 
       11.77        23.77        15.12        30.74        12.23         8.48 
TCGA-A2-A25C TCGA-A2-A25E TCGA-A7-A0CD TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0DB 
        9.37        82.55         5.59         5.29         6.18         4.60 
TCGA-A7-A13F TCGA-A7-A13G TCGA-A7-A26E TCGA-A7-A26H TCGA-A7-A26J TCGA-A7-A2KD 
        6.44         6.84        13.84         2.10         2.20         5.95 
TCGA-A7-A3IY TCGA-A7-A3IZ TCGA-A7-A3J0 TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q 
        4.96         4.87         2.50        13.02        13.02         1.02 
TCGA-A8-A06R TCGA-A8-A06T TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A075 
       17.95        41.06        31.00        26.01         1.02        17.00 
TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07F TCGA-A8-A07G TCGA-A8-A07I 
       53.95         9.01        33.01        18.94        18.94        14.01 
TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S TCGA-A8-A07W TCGA-A8-A082 TCGA-A8-A084 
       17.00        10.98         7.96         9.99        18.05        15.06 
TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08B TCGA-A8-A08C TCGA-A8-A08F TCGA-A8-A08G 
       36.95        13.02        23.08        19.96        18.05        19.92 
TCGA-A8-A08I TCGA-A8-A08J TCGA-A8-A08P TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A08Z 
       12.00        37.05        30.97        19.07        93.04        40.01 
TCGA-A8-A091 TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A09C 
       19.07        17.03        17.92         9.99        12.00         1.02 
TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N TCGA-A8-A09Q TCGA-A8-A09R 
       33.07        29.95        15.02         1.02        25.02         8.98 
TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A09W TCGA-A8-A0A2 TCGA-A8-A0A9 TCGA-A8-A0AB 
       19.00        15.02         0.99        19.00        13.02        17.00 
TCGA-A8-A0AD TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A23H TCGA-AC-A2BM TCGA-AN-A03X 
       38.04         0.95         2.37         2.66        38.20         0.33 
TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A04A TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AM 
        0.33         0.23         2.93         7.99         7.33         0.16 
TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0FT TCGA-AN-A0FV 
        0.30         6.41         4.60         6.97         6.02         0.33 
TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR 
        0.33         0.33         0.33        12.33         0.30         0.33 
TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AN-A0XV TCGA-AN-A0XW TCGA-AO-A03N TCGA-AO-A03O 
        0.33         0.33         5.33         5.59        54.08        81.63 
TCGA-AO-A03P TCGA-AO-A0J3 TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0JI TCGA-AO-A0JM 
       84.69         9.93         8.55         9.11        38.53        60.03 
TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12G TCGA-AO-A12H 
       99.22        93.70        77.56        65.52        41.59        28.34 
TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A04L 
       82.62        49.94         0.53        17.79        14.43       109.94 
TCGA-AQ-A0Y5 TCGA-AQ-A1H2 TCGA-AQ-A1H3 TCGA-AR-A0TR TCGA-AR-A0TV TCGA-AR-A0TW 
        5.62         7.56         4.54         5.26        29.72        24.30 
TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A1AP TCGA-AR-A1AS 
       55.86        43.17        83.87        74.40        39.95        40.83 
TCGA-AR-A1AV TCGA-AR-A24H TCGA-AR-A24K TCGA-AR-A24L TCGA-AR-A24M TCGA-AR-A24N 
       42.58       109.58        50.89        73.02        65.42        68.19 
TCGA-AR-A24P TCGA-AR-A24R TCGA-AR-A24V TCGA-AR-A24X TCGA-AR-A24Z TCGA-AR-A250 
        0.85        57.37        54.18        48.16        51.75        56.12 
TCGA-AR-A2LE TCGA-AR-A2LK TCGA-AR-A2LL TCGA-B6-A0I5 TCGA-B6-A0I8 TCGA-B6-A0IA 
      128.65        42.84         7.33       149.56        24.62       220.87 
TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IM TCGA-B6-A0IO TCGA-B6-A0IP TCGA-B6-A0RH 
      129.57        50.70       126.12       110.14       110.93       188.98 
TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP 
      223.40        81.17        78.02       172.96       162.02       102.77 
TCGA-B6-A0WS TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WZ TCGA-B6-A0X0 
       97.48       177.40        79.63        17.95       129.57       129.70 
TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A1KC TCGA-B6-A1KI TCGA-B6-A2IU TCGA-BH-A0AU 
       28.24        68.94        43.59        48.10       159.12        24.53 
TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BT TCGA-BH-A0BV 
       39.16        48.36        27.16        53.92        45.57        49.94 
TCGA-BH-A0BZ TCGA-BH-A0C1 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DS 
       49.05        43.99        42.90        45.80        38.01         2.53 
TCGA-BH-A0DT TCGA-BH-A0DZ TCGA-BH-A0E1 TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0EI 
       38.47        16.27        15.68        44.78        24.49        24.43 
TCGA-BH-A0H0 TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0HA TCGA-BH-A0HI TCGA-BH-A0HO 
       15.16        24.56        23.05        28.14        20.35         2.50 
TCGA-BH-A0HQ TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0W3 TCGA-BH-A0W5 TCGA-BH-A0W7 
       36.85        12.89        51.29         5.92        17.85        18.35 
TCGA-BH-A18I TCGA-BH-A18J TCGA-BH-A18K TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18P 
        7.23        20.09        90.81        26.66        37.74        30.28 
TCGA-BH-A18S TCGA-BH-A18U TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EV TCGA-BH-A1EW 
       66.05        51.39       113.82        82.85        12.00        55.69 
TCGA-BH-A1EY TCGA-BH-A1F2 TCGA-BH-A1F5 TCGA-BH-A1F8 TCGA-BH-A1FD TCGA-BH-A1FG 
       17.69        31.53        89.16        24.62        33.14       122.89 
TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FN TCGA-BH-A1FR TCGA-BH-A202 
       63.35        55.00        45.63        72.07       144.59         0.72 
TCGA-BH-A204 TCGA-BH-A28Q TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HL TCGA-C8-A1HM 
       83.31         6.44         0.10         0.23         0.07         0.20 
TCGA-C8-A1HN TCGA-C8-A26V TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A274 TCGA-C8-A27A 
        0.07         0.30         0.13         0.20         0.03        12.20 
TCGA-D8-A140 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JC TCGA-D8-A1JD 
        0.89         8.42         8.15         0.59         5.85         8.98 
TCGA-D8-A1JE TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1JP TCGA-D8-A1JS 
        1.87         0.69         9.01         7.13         5.49         3.45 
TCGA-D8-A1JT TCGA-D8-A1X5 TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1X9 
        4.04         5.62         7.76         2.79         8.94        12.49 
TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XG 
        9.01         6.61         2.66         5.10         6.48         6.44 
TCGA-D8-A1XJ TCGA-D8-A1XL TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XV 
       11.57        10.49         7.96         5.52         0.59         4.80 
TCGA-D8-A1XY TCGA-D8-A1XZ TCGA-D8-A1Y1 TCGA-D8-A1Y3 TCGA-D8-A27E TCGA-D8-A27K 
        2.66         3.95         3.78         4.08         5.98         3.88 
TCGA-D8-A27L TCGA-D8-A27N TCGA-D8-A27P TCGA-D8-A27R TCGA-D8-A27W TCGA-E2-A105 
        4.11         4.77         0.72         2.96         0.49        38.24 
TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10C TCGA-E2-A10E 
       51.12        38.53        11.57        24.59        28.04        13.74 
TCGA-E2-A14O TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14W TCGA-E2-A152 TCGA-E2-A153 
       38.53        27.42        29.26        27.39        19.33        19.27 
TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15C TCGA-E2-A15D 
       10.68        18.18        15.81        16.50        16.31        10.36 
TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L 
       10.36         1.38        13.51        15.22         1.12        10.88 
TCGA-E2-A15O TCGA-E2-A15P TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A1B4 TCGA-E2-A1BD 
       12.99        10.36        10.85         9.01        29.95        10.42 
TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IU 
       32.32        24.82        17.03         0.46        12.89         4.18 
TCGA-E2-A1L7 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E9-A1R3 TCGA-E9-A1R4 
       20.81        33.37        12.76        15.22         2.10         0.95 
TCGA-E9-A1R5 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RB TCGA-E9-A1RC TCGA-E9-A1RD 
        1.38         2.76         1.12         0.69        40.37         0.66 
TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RI TCGA-E9-A226 TCGA-E9-A227 TCGA-E9-A245 
        1.55         1.25         1.58         0.53         0.79         0.82 
TCGA-E9-A247 TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A2JS TCGA-E9-A3HO TCGA-EW-A1IY 
        0.39         0.92         0.33         0.43         0.62         8.48 
TCGA-EW-A1J1 TCGA-EW-A1J3 TCGA-EW-A1J6 TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ 
        9.27         8.28        19.56        18.48        19.50        30.94 
TCGA-EW-A1P0 TCGA-EW-A1P3 TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PC TCGA-EW-A1PE 
       36.85        32.45        12.00        10.26         6.12         3.48 
TCGA-EW-A2FR TCGA-EW-A2FW TCGA-GI-A2C8 TCGA-GM-A2D9 TCGA-GM-A2DC TCGA-GM-A2DM 
       36.82         6.25         6.97        59.57        53.52        76.64 
TCGA-GM-A2DN 
       77.33 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SJ TCGA-A2-A04X TCGA-A2-A04Y 
       14.37        43.40        48.10        14.01        44.35        25.08 
TCGA-A2-A0CL TCGA-A2-A0CP TCGA-A2-A0CT TCGA-A2-A0CV TCGA-A2-A0CZ TCGA-A2-A0EN 
       60.07        82.03        63.02        61.48        43.99        82.68 
TCGA-A2-A0EO TCGA-A2-A0EQ TCGA-A2-A0ES TCGA-A2-A0EU TCGA-A2-A0EV TCGA-A2-A0EW 
       71.70        67.50        32.91        24.10        17.92        25.32 
TCGA-A2-A0EX TCGA-A2-A0SU TCGA-A2-A0SW TCGA-A2-A0SY TCGA-A2-A0T3 TCGA-A2-A0T4 
       18.05        44.42        44.84        37.94        14.99        12.99 
TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YD TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1FW 
       11.31        13.05        18.08        10.98         8.81         7.27 
TCGA-A2-A1FZ TCGA-A2-A1G0 TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25D 
       13.45        12.49         4.34        42.25        97.58         7.99 
TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A7-A0CG TCGA-A7-A0D9 TCGA-A7-A3J1 TCGA-A8-A06U 
       11.93        26.40         5.46         5.23         2.47        29.00 
TCGA-A8-A07E TCGA-A8-A07J TCGA-A8-A08O TCGA-A8-A095 TCGA-A8-A097 TCGA-A8-A09A 
       19.99        12.00        30.97        41.95        12.00         9.99 
TCGA-A8-A09D TCGA-A8-A0A1 TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-AC-A23G TCGA-AC-A2B8 
       13.02        12.00        13.02        21.04        10.82         1.45 
TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FO TCGA-AC-A3HN 
        1.45        55.40        36.99        38.79        50.70         0.69 
TCGA-AC-A3OD TCGA-AN-A046 TCGA-AN-A049 TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0FW 
        1.15         0.33         0.62         7.17         6.28         0.36 
TCGA-AN-A0XL TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A03V 
        0.33        80.28        47.84        56.12        39.02        29.13 
TCGA-AO-A0J5 TCGA-AO-A0J9 TCGA-AO-A0JA TCGA-AO-A0JC TCGA-AO-A0JD TCGA-AO-A0JF 
       24.16        41.26        11.38        50.86        59.61        11.64 
TCGA-AO-A0JG TCGA-AO-A0JJ TCGA-AO-A12A TCGA-AO-A12E TCGA-AO-A1KO TCGA-AR-A0TQ 
       14.76        49.71        90.54        57.27        14.73        49.32 
TCGA-AR-A0TT TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AN TCGA-AR-A1AU TCGA-AR-A1AW 
       55.20        51.22        48.82        43.69        46.32        35.24 
TCGA-AR-A1AX TCGA-AR-A24O TCGA-AR-A24S TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A252 
       36.26        65.65        62.07        53.26        50.96        40.64 
TCGA-AR-A255 TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO TCGA-AR-A2LQ TCGA-B6-A0I9 
       34.78        40.01        17.06        20.81        16.96        12.13 
TCGA-B6-A0IE TCGA-B6-A0IG TCGA-B6-A0IH TCGA-B6-A0IN TCGA-B6-A0RG TCGA-B6-A0RQ 
       65.69       146.50       112.37        84.59        68.45       140.48 
TCGA-B6-A0RV TCGA-B6-A0WY TCGA-B6-A0X7 TCGA-B6-A1KN TCGA-BH-A0AY TCGA-BH-A0AZ 
      157.41       113.75        58.88       109.48        25.55        28.50 
TCGA-BH-A0B0 TCGA-BH-A0B1 TCGA-BH-A0B8 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BD 
       46.92        37.74        51.58        37.22        32.02        18.21 
TCGA-BH-A0BF TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0C0 
       25.68        21.70        36.72        35.67        48.69        41.75 
TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DO 
       48.13        31.17        23.44        22.13        13.91        17.26 
TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DV TCGA-BH-A0DX TCGA-BH-A0E2 TCGA-BH-A0E9 
       15.65         3.22        45.17        47.41        12.36        46.19 
TCGA-BH-A0EA TCGA-BH-A0GY TCGA-BH-A0GZ TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A0H9 
       32.65        30.15        10.78        37.78        35.51        41.00 
TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HK TCGA-BH-A0HP TCGA-BH-A0HX TCGA-BH-A0W4 
       26.50        23.90         5.85        13.61        27.25         5.75 
TCGA-BH-A18F TCGA-BH-A18M TCGA-BH-A18R TCGA-BH-A1EO TCGA-BH-A1EU TCGA-BH-A1FB 
        8.81        72.56        37.51        91.99        42.28       120.62 
TCGA-BH-A1FE TCGA-BH-A1FH TCGA-BH-A201 TCGA-BH-A209 TCGA-C8-A1HI TCGA-C8-A26W 
       74.73        36.92         6.87       130.16         0.07         0.23 
TCGA-D8-A141 TCGA-D8-A145 TCGA-D8-A146 TCGA-D8-A1JH TCGA-D8-A1JU TCGA-D8-A1XM 
        3.72         1.61        11.31         9.34         3.48         7.17 
TCGA-D8-A1XU TCGA-D8-A1Y0 TCGA-D8-A1Y2 TCGA-D8-A27G TCGA-D8-A27I TCGA-D8-A27T 
        4.90         5.46         2.37         6.87         6.08         4.44 
TCGA-D8-A27V TCGA-E2-A108 TCGA-E2-A10F TCGA-E2-A14Q TCGA-E2-A14V TCGA-E2-A14Z 
        2.40         4.08        11.84        32.02        24.59        17.03 
TCGA-E2-A15E TCGA-E2-A15M TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1BC TCGA-E2-A1IF 
       17.00         7.69        44.75        25.45         9.76        31.43 
TCGA-E2-A1IH TCGA-E2-A1IJ TCGA-E2-A1IO TCGA-E2-A1L6 TCGA-E2-A3DX TCGA-E9-A1R2 
       21.63        23.84        14.73        43.13         7.13         0.62 
TCGA-E9-A295 TCGA-E9-A2JT TCGA-EW-A1IW TCGA-EW-A1IX TCGA-EW-A1J2 TCGA-EW-A1J5 
        0.69         0.76         8.28        35.57         4.57         7.46 
TCGA-EW-A1OV TCGA-EW-A1PA TCGA-EW-A1PD TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A2FS 
       17.16         8.78         5.72         4.57        28.77        38.56 
TCGA-EW-A2FV TCGA-GM-A2DA TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DO 
        7.82       194.27        61.91        62.33        90.81        53.33 
TCGA-GM-A3NY 
       24.43 

$subtype3
TCGA-A1-A0SB TCGA-A1-A0SI TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P 
        8.52        20.84        31.79        28.01        19.17        17.98 
TCGA-A2-A04Q TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04W TCGA-A2-A0CM TCGA-A2-A0D0 
       41.92        64.11        22.03        63.06        24.79        21.14 
TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EY TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 
       25.84        25.02        15.95        54.02        42.35        11.08 
TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A2-A1G1 
       10.59         7.96         8.28        10.72        21.73        12.20 
TCGA-A2-A25F TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F 
        3.72         8.32        12.26         8.78         9.44         8.45 
TCGA-A7-A26G TCGA-A7-A26I TCGA-A8-A07C TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U 
        6.87         4.01        19.07         9.99         8.98         9.96 
TCGA-A8-A08L TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AC-A2BK 
        9.99         0.99        33.99        14.01         0.99        38.53 
TCGA-AC-A2QH TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AT TCGA-AN-A0FJ 
        1.02         1.78         1.71         6.48         0.33         7.92 
TCGA-AN-A0FL TCGA-AN-A0FX TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J2 
        7.56         0.33         0.53         0.33        59.05        19.23 
TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A128 
        9.67        25.48        64.60        43.36       102.54        94.59 
TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F TCGA-AO-A1KR TCGA-AQ-A04J TCGA-AR-A0TP 
       96.10        64.04        48.36        70.36         5.23        78.64 
TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0TX TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U4 
       37.41        11.84         0.49         0.26         6.08        53.49 
TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR 
       75.55        61.84        52.73        43.53        43.04        17.19 
TCGA-AR-A1AY TCGA-AR-A24Q TCGA-AR-A24U TCGA-AR-A251 TCGA-AR-A254 TCGA-AR-A256 
       20.19        66.02        53.36        45.14        39.85        93.83 
TCGA-AR-A2LH TCGA-AR-A2LR TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0IJ 
       20.22        20.38        77.62       125.79        32.58       176.98 
TCGA-B6-A0IK TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU 
       18.77       127.27       211.53       100.67        89.46       131.21 
TCGA-B6-A0WX TCGA-B6-A0X1 TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 
       21.47       186.44       101.52        38.79        20.45        39.55 
TCGA-BH-A0B7 TCGA-BH-A0BG TCGA-BH-A0BL TCGA-BH-A0BR TCGA-BH-A0BW TCGA-BH-A0DL 
       56.98        24.85        44.02        53.65        11.67        48.23 
TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A0WA 
        4.37         9.60        31.00        28.50         5.59        12.23 
TCGA-BH-A18G TCGA-BH-A18Q TCGA-BH-A18T TCGA-BH-A18V TCGA-BH-A1EN TCGA-BH-A1EX 
        2.01        55.63         7.36        51.12        67.46        49.58 
TCGA-BH-A1F0 TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FU TCGA-BH-A203 TCGA-BH-A208 
       25.81        97.48       114.12        72.07        38.60        57.83 
TCGA-C8-A1HJ TCGA-C8-A1HK TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A275 TCGA-C8-A278 
        0.16         0.23         0.36         0.43         0.03         0.03 
TCGA-C8-A27B TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 
        0.99         8.68         6.90         2.01         5.65         0.07 
TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1JM TCGA-D8-A1XK 
        3.16         6.15         3.58         8.71         7.82        10.72 
TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M 
        5.82         6.35         3.85         7.46         4.60         4.73 
TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A150 
       44.38        16.01        27.78        22.75        22.62        19.43 
TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1II TCGA-E2-A1LB 
       14.79        16.93        64.57        41.79        27.95        31.96 
TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A1LS 
       11.51        94.52        90.41         8.75        33.34         7.86 
TCGA-E9-A1RH TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A248 TCGA-EW-A1OW TCGA-EW-A1P4 
        0.46         1.41         0.66         0.69        15.22        16.47 
TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PH TCGA-GI-A2C9 TCGA-GM-A2DB 
       20.88         7.86        19.99         4.57        23.11        53.10 
TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DH 
       43.04        42.71        42.28 

subtype1 subtype2 subtype3 
    0.03     0.07     0.03 
subtype1 subtype2 subtype3 
  223.40   194.27   211.53 
subtype1 subtype2 subtype3 
   16.27    25.45    19.99 
[1] "0.0 - 223.4 (16.3)" "0.1 - 194.3 (25.4)" "0.0 - 211.5 (20.0)"
  [1] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
  [7] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [13] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [19] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
 [25] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
 [31] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
 [37] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [43] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [49] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [55] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
 [61] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [67] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [73] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [97] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[109] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[115] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[121] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[133] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[157] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[163] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[169] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[175] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[181] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[193] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[205] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[211] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[217] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[223] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[235] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[241] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[247] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[253] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[259] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[265] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[271] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[277] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[289] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[295] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[301] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[307] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[319] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[325] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[337] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[343] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[349] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[355] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[361] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[367] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[373] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[379] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[385] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[391] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[397] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[403] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[409] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[415] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[427] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[433] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[439] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[445] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[451] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[457] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[463] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[469] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[475] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[481] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[487] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[493] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[499] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[505] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[511] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[517] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[523] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[529] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[535] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[541] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[547] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[553] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[559] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[565] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[571] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[577] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[583] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[589] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[595] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[601] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[607] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[613] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[619] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[625] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[631] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[637] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[643] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[649] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[655] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[661] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[667] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[673] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[679] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[685] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[691] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[697] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[703] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[709] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[715] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[721] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[727] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[733] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[739] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[745] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[751] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[757] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[763] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[769] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[775] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
  [1] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
  [7] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [13] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [19] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
 [25] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
 [31] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
 [37] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [43] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [49] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [55] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
 [61] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [67] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [73] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [97] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[109] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[115] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[121] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[133] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[157] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[163] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[169] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[175] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[181] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[193] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[205] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[211] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[217] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[223] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[235] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[241] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[247] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[253] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[259] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[265] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[271] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[277] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[289] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[295] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[301] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[307] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[319] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[325] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[337] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[343] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[349] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[355] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[361] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[367] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[373] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[379] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[385] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[391] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[397] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[403] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[409] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[415] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[427] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[433] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[439] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[445] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[451] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[457] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[463] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[469] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[475] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[481] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[487] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[493] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[499] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[505] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[511] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[517] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[523] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[529] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[535] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[541] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[547] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[553] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[559] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[565] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[571] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[577] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[583] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[589] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[595] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[601] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[607] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[613] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[619] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[625] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[631] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[637] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[643] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[649] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[655] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[661] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[667] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[673] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[679] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[685] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[691] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[697] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[703] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[709] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[715] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[721] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[727] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[733] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[739] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[745] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[751] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[757] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[763] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[769] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[775] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
  [1] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
  [7] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [13] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [19] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
 [25] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
 [31] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
 [37] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [43] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [49] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [55] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
 [61] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [67] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [73] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [97] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[109] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[115] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[121] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[133] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[157] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[163] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[169] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[175] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[181] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[193] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[205] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[211] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[217] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[223] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[235] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[241] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[247] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[253] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[259] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[265] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[271] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[277] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[289] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[295] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[301] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[307] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[319] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[325] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[337] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[343] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[349] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[355] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[361] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[367] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[373] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[379] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[385] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[391] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[397] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[403] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[409] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[415] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[427] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[433] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[439] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[445] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[451] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[457] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[463] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[469] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[475] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[481] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[487] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[493] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[499] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[505] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[511] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[517] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[523] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[529] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[535] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[541] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[547] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[553] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[559] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[565] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[571] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[577] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[583] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[589] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[595] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[601] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[607] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[613] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[619] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[625] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[631] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[637] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[643] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[649] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[655] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[661] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[667] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[673] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[679] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[685] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[691] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[697] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[703] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[709] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[715] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[721] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[727] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[733] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[739] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[745] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[751] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[757] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[763] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[769] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[775] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
D8V2, continuous
D8V3, binary
          cls
clus         0   1
  subtype1 410   8
  subtype2 218   1
  subtype3 199   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  410    8
  subtype2  218    1
  subtype3  199    0
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      410      218      199
  MALE          8        1        0
D8V4, binary
          cls
clus         0   1
  subtype1  89 329
  subtype2  62 157
  subtype3  53 146
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   89  329
  subtype2   62  157
  subtype3   53  146
     clus
vv    subtype1 subtype2 subtype3
  NO        89       62       53
  YES      329      157      146
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        1 370   7  40
  subtype2        1 191   5  22
  subtype3        0 187   3   9
D8V5, multiclass
          vv
clus        N0 N0 (I+) N0 (I-) N0 (MOL+)  N1 N1A N1B N1C N1MI  N2 N2A  N3 N3A
  subtype1 118       8      52         1  48  72  17   1   10  31  29   7  14
  subtype2  55       9      40         0  26  34   7   0   10   8  11   6   9
  subtype3  67       5      37         0  27  18   8   1    2  11  10   4   6
          vv
clus       N3B N3C  NX
  subtype1   0   0  10
  subtype2   0   0   4
  subtype3   1   1   1
D8V6, multiclass
D8V7, continuous
D8V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      28       30        4        2       144        91         1
  subtype2      27       18        3        5        61        52         0
  subtype3      14       14        1        1        85        42         1
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         68         20         14        7         0       9
  subtype2         28          1         13        5         1       5
  subtype3         22          2         10        3         0       3
D8V9, multiclass

Clustering(9) Variable = MIRSEQ_CNMF
D9V1, survival
          sevent
clus2        0   1
  subtype1 146  20
  subtype2 361  39
  subtype3 186  36
subtype1 subtype2 subtype3 
     166      400      222 
subtype1 subtype2 subtype3 
      20       39       36 
$subtype1
TCGA-A1-A0SB TCGA-A2-A0CU TCGA-A2-A0CZ TCGA-A2-A0EN TCGA-A2-A0ES TCGA-A2-A0EV 
        8.52         5.16        43.99        82.68        32.91        17.92 
TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T1 TCGA-A2-A0T3 
       25.32        18.05        54.02        42.35        10.59        14.99 
TCGA-A2-A0T6 TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1FZ TCGA-A2-A1G0 TCGA-A2-A1G6 
       11.31        10.98         8.81        13.45        12.49         4.34 
TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25D TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A7-A26G 
       42.25        97.58         7.99        11.93        26.40         6.87 
TCGA-A7-A26H TCGA-A7-A3IY TCGA-A7-A3IZ TCGA-A7-A3J1 TCGA-AC-A23G TCGA-AC-A2B8 
        2.10         4.96         4.87         2.47        10.82         1.45 
TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FM TCGA-AC-A2FO 
        1.45        55.40        36.99        38.79        26.04        50.70 
TCGA-AC-A2QJ TCGA-AC-A3BB TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AO-A03R TCGA-AO-A03T 
        2.27         0.99         0.69         1.15        56.12        39.02 
TCGA-AO-A03V TCGA-AO-A0JC TCGA-AO-A0JG TCGA-AO-A12A TCGA-AO-A12E TCGA-AO-A1KO 
       29.13        50.86        14.76        90.54        57.27        14.73 
TCGA-AQ-A04J TCGA-AQ-A1H3 TCGA-AR-A0TY TCGA-AR-A1AJ TCGA-AR-A1AK TCGA-AR-A1AL 
        5.23         4.54        55.86        52.73        51.22        48.82 
TCGA-AR-A1AO TCGA-AR-A1AU TCGA-AR-A1AX TCGA-AR-A24T TCGA-AR-A24U TCGA-AR-A24W 
       43.53        46.32        36.26        53.26        53.36        50.96 
TCGA-AR-A252 TCGA-AR-A2LH TCGA-AR-A2LL TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
       40.64        20.22         7.33        40.01        17.06        20.81 
TCGA-AR-A2LQ TCGA-AR-A2LR TCGA-B6-A0IH TCGA-B6-A0IK TCGA-B6-A0RQ TCGA-B6-A0RU 
       16.96        20.38       112.37        18.77       140.48       131.21 
TCGA-B6-A2IU TCGA-BH-A0AZ TCGA-BH-A0B5 TCGA-BH-A0B6 TCGA-BH-A0B7 TCGA-BH-A0BD 
      159.12        28.50        48.36        56.94        56.98        18.21 
TCGA-BH-A0BF TCGA-BH-A0BL TCGA-BH-A0BO TCGA-BH-A0BQ TCGA-BH-A0BZ TCGA-BH-A0C3 
       25.68        44.02        35.67        27.16        49.05        48.13 
TCGA-BH-A0DE TCGA-BH-A0DI TCGA-BH-A0DO TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX 
       31.17        22.13        17.26        38.47        45.17        47.41 
TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A0RX TCGA-BH-A0W4 
       46.19        32.65        37.78        35.51         5.59         5.75 
TCGA-BH-A18F TCGA-BH-A18M TCGA-BH-A1EU TCGA-BH-A1EW TCGA-BH-A1EX TCGA-BH-A1F0 
        8.81        72.56        42.28        55.69        49.58        25.81 
TCGA-BH-A1F2 TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FH TCGA-BH-A1FU TCGA-BH-A201 
       31.53       120.62        74.73        36.92        72.07         6.87 
TCGA-BH-A208 TCGA-BH-A28O TCGA-C8-A26X TCGA-C8-A26Y TCGA-D8-A145 TCGA-D8-A1JH 
       57.83        10.62         0.36         0.43         1.61         9.34 
TCGA-D8-A1JU TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A1XM TCGA-D8-A27G TCGA-D8-A27I 
        3.48         8.94         6.61         7.17         6.87         6.08 
TCGA-D8-A27L TCGA-D8-A27M TCGA-D8-A27N TCGA-D8-A27P TCGA-D8-A27R TCGA-D8-A27T 
        4.11         4.73         4.77         0.72         2.96         4.44 
TCGA-E2-A108 TCGA-E2-A14N TCGA-E2-A14Q TCGA-E2-A14U TCGA-E2-A14Z TCGA-E2-A15D 
        4.08        44.38        32.02        27.55        17.03        10.36 
TCGA-E2-A15E TCGA-E2-A15M TCGA-E2-A1B1 TCGA-E2-A1B6 TCGA-E2-A1BC TCGA-E2-A1IF 
       17.00         7.69        44.75        11.11         9.76        31.43 
TCGA-E2-A1IH TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1LE TCGA-E2-A2P5 TCGA-E2-A3DX 
       21.63         4.18        43.13        28.90        10.72         7.13 
TCGA-E9-A227 TCGA-E9-A295 TCGA-E9-A2JT TCGA-EW-A1IW TCGA-EW-A1J2 TCGA-EW-A1P1 
        0.79         0.69         0.76         8.28         4.57        30.21 
TCGA-EW-A1P7 TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A2FS TCGA-EW-A2FV TCGA-GI-A2C8 
       20.88         4.57        28.77        38.56         7.82         6.97 
TCGA-GM-A2DB TCGA-GM-A2DC TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DI TCGA-GM-A2DK 
       53.10        53.52        43.04        42.71        61.91        62.33 
TCGA-GM-A2DL TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NW 
       90.81        77.33        53.33        98.04 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SH TCGA-A1-A0SI 
       14.37        43.40        48.10        14.24        47.24        20.84 
TCGA-A1-A0SJ TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04N TCGA-A2-A04R 
       14.01         7.96        39.32        18.18       103.66        77.72 
TCGA-A2-A04V TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CP TCGA-A2-A0CQ TCGA-A2-A0CS 
       63.12        63.06        25.08        82.03        78.64        75.55 
TCGA-A2-A0CT TCGA-A2-A0CV TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0EO 
       63.02        61.48        24.20        16.31        90.64        71.70 
TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0EY TCGA-A2-A0SU TCGA-A2-A0SV 
       62.53        26.53        24.10        15.95        44.42        27.12 
TCGA-A2-A0SY TCGA-A2-A0T4 TCGA-A2-A0T5 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YD 
       37.94        12.99        10.55        13.05        21.14        18.08 
TCGA-A2-A0YF TCGA-A2-A0YH TCGA-A2-A0YI TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW 
        9.50        12.46        11.77        23.77        15.12         7.27 
TCGA-A2-A1FX TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25E TCGA-A7-A0CD 
       30.74        12.23         8.48         9.37        82.55         5.59 
TCGA-A7-A0CG TCGA-A7-A0CH TCGA-A7-A0D9 TCGA-A7-A0DB TCGA-A7-A13F TCGA-A7-A13G 
        5.46         5.29         5.23         4.60         6.44         6.84 
TCGA-A7-A26E TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3J0 TCGA-A8-A06P TCGA-A8-A06Q 
       13.84         2.20         5.95         2.50        13.02         1.02 
TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A075 TCGA-A8-A079 
       41.06        29.00        26.01         1.02        17.00         9.01 
TCGA-A8-A07B TCGA-A8-A07E TCGA-A8-A07F TCGA-A8-A07J TCGA-A8-A07P TCGA-A8-A07S 
       33.01        19.99        18.94        12.00        10.98         7.96 
TCGA-A8-A07Z TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G 
       28.04        15.06        36.95        13.02         0.99        19.92 
TCGA-A8-A08I TCGA-A8-A08O TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A091 TCGA-A8-A092 
       12.00        30.97        93.04        40.01        19.07        17.03 
TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A097 TCGA-A8-A099 TCGA-A8-A09A TCGA-A8-A09B 
       17.92        41.95        12.00         9.99         9.99        12.00 
TCGA-A8-A09C TCGA-A8-A09D TCGA-A8-A09E TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N 
        1.02        13.02        30.97        29.95        15.02         1.02 
TCGA-A8-A09T TCGA-A8-A0A1 TCGA-A8-A0A2 TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-A8-A0A9 
       19.00        12.00        19.00        13.02        21.04        13.02 
TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A23H TCGA-AC-A2BM 
       17.00        38.04         0.95         2.37         2.66        38.20 
TCGA-AC-A2QI TCGA-AC-A3TN TCGA-AN-A03X TCGA-AN-A041 TCGA-AN-A046 TCGA-AN-A049 
        0.92         1.12         0.33         0.23         0.33         0.62 
TCGA-AN-A04A TCGA-AN-A0AK TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FF TCGA-AN-A0FK 
        2.93         7.33         0.30         6.41         4.60         6.97 
TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0XL TCGA-AN-A0XN TCGA-AN-A0XP TCGA-AN-A0XR 
        7.17         6.28         0.33         0.33         0.30         0.33 
TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AN-A0XV TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03M 
        0.33         0.33         5.33         5.59        80.28        47.84 
TCGA-AO-A03N TCGA-AO-A0J3 TCGA-AO-A0J5 TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0J9 
       54.08         9.93        24.16         8.55         9.11        41.26 
TCGA-AO-A0JA TCGA-AO-A0JB TCGA-AO-A0JD TCGA-AO-A0JF TCGA-AO-A0JI TCGA-AO-A0JJ 
       11.38        37.81        59.61        11.64        38.53        49.71 
TCGA-AO-A0JM TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A128 TCGA-AO-A12B TCGA-AO-A12C 
       60.03        99.22        93.70        94.59        77.56        65.52 
TCGA-AO-A12G TCGA-AO-A12H TCGA-AO-A1KP TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A1H2 
       41.59        28.34        82.62        17.79        14.43         7.56 
TCGA-AR-A0TR TCGA-AR-A0TV TCGA-AR-A0TX TCGA-AR-A0TZ TCGA-AR-A0U3 TCGA-AR-A1AN 
        5.26        29.72         0.49        43.17        74.40        43.69 
TCGA-AR-A1AP TCGA-AR-A1AS TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A24K 
       39.95        40.83        41.82        42.58        35.24        50.89 
TCGA-AR-A24L TCGA-AR-A24M TCGA-AR-A24N TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24R 
       73.02        65.42        68.19        65.65         0.85        57.37 
TCGA-AR-A24V TCGA-AR-A24X TCGA-AR-A24Z TCGA-AR-A250 TCGA-AR-A255 TCGA-AR-A2LE 
       54.18        48.16        51.75        56.12        34.78       128.65 
TCGA-AR-A2LK TCGA-B6-A0I5 TCGA-B6-A0I8 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC 
       42.84       149.56        24.62       220.87       129.57        50.70 
TCGA-B6-A0IG TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0IP TCGA-B6-A0RG 
      146.50       126.12        84.59       110.14       110.93        68.45 
TCGA-B6-A0RH TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO 
      188.98       223.40        81.17        78.02       172.96       162.02 
TCGA-B6-A0RP TCGA-B6-A0RV TCGA-B6-A0WS TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW 
      102.77       157.41        97.48       177.40        79.63        17.95 
TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A1KC TCGA-B6-A1KI 
      129.57       129.70        28.24        68.94        43.59        48.10 
TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0AY TCGA-BH-A0B0 TCGA-BH-A0B1 TCGA-BH-A0B4 
      109.48        24.53        25.55        46.92        37.74        39.16 
TCGA-BH-A0B8 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BP 
       51.58        37.22        32.02        21.70        36.72        48.69 
TCGA-BH-A0BR TCGA-BH-A0BS TCGA-BH-A0BV TCGA-BH-A0C1 TCGA-BH-A0C7 TCGA-BH-A0DG 
       53.65        53.92        49.94        43.99        42.90        23.44 
TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0E1 
       38.01        13.91        15.65         3.22         2.53        15.68 
TCGA-BH-A0E7 TCGA-BH-A0EI TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H6 TCGA-BH-A0H7 
       44.78        24.43        10.78        15.16        24.56        23.05 
TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HK 
       41.00        28.14        26.50        23.90        20.35         5.85 
TCGA-BH-A0HO TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX 
        2.50        13.61        36.85        12.89        51.29        27.25 
TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A0W5 TCGA-BH-A0W7 TCGA-BH-A18I TCGA-BH-A18J 
       28.50         5.92        17.85        18.35         7.23        20.09 
TCGA-BH-A18K TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-BH-A1EN TCGA-BH-A1EO 
       90.81        37.74        30.28        66.05        67.46        91.99 
TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EV TCGA-BH-A1EY TCGA-BH-A1F5 TCGA-BH-A1F8 
      113.82        82.85        12.00        17.69        89.16        24.62 
TCGA-BH-A1FG TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FR TCGA-BH-A202 TCGA-BH-A204 
      122.89        63.35        55.00       144.59         0.72        83.31 
TCGA-BH-A28Q TCGA-C8-A138 TCGA-C8-A1HI TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HN 
        6.44         0.23         0.07         0.23         0.07         0.07 
TCGA-C8-A26V TCGA-C8-A26W TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A274 TCGA-D8-A140 
        0.30         0.23         0.13         0.20         0.03         0.89 
TCGA-D8-A141 TCGA-D8-A146 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JD TCGA-D8-A1JE 
        3.72        11.31         8.42         8.15         8.98         1.87 
TCGA-D8-A1JF TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1JP TCGA-D8-A1JS 
        3.16         0.69         9.01         7.13         5.49         3.45 
TCGA-D8-A1JT TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XC 
        4.04         7.76         2.79        12.49         9.01         2.66 
TCGA-D8-A1XD TCGA-D8-A1XG TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XU 
        5.10         6.44         7.96         5.52         0.59         4.90 
TCGA-D8-A1XY TCGA-D8-A1Y0 TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A27E TCGA-D8-A27K 
        2.66         5.46         3.78         2.37         5.98         3.88 
TCGA-D8-A27V TCGA-D8-A27W TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A107 TCGA-E2-A109 
        2.40         0.49        38.24        51.12        25.08        38.53 
TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A14O 
       11.57        24.59        28.04        13.74        11.84        38.53 
TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A152 TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 
       27.42        29.26        19.33        19.27        10.68        18.18 
TCGA-E2-A156 TCGA-E2-A15C TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15I 
       15.81        16.31        15.39        10.36         1.38        13.51 
TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15P TCGA-E2-A15R 
       15.22         1.12        10.88        12.99        10.36        10.85 
TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1B5 TCGA-E2-A1BD TCGA-E2-A1IE 
        9.01         8.78        29.95        25.45        10.42        32.32 
TCGA-E2-A1IG TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO 
       24.82        23.84        17.03         0.46        12.89        14.73 
TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E2-A1LB TCGA-E2-A2P6 TCGA-E9-A1R3 
       33.37        12.76        15.22        31.96         5.49         2.10 
TCGA-E9-A1R4 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RA TCGA-E9-A1RC TCGA-E9-A1RD 
        0.95         2.76         1.12         0.95        40.37         0.66 
TCGA-E9-A1RE TCGA-E9-A1RG TCGA-E9-A1RI TCGA-E9-A226 TCGA-E9-A245 TCGA-E9-A247 
        1.55         1.15         1.58         0.53         0.82         0.39 
TCGA-E9-A24A TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1J1 TCGA-EW-A1J3 
        0.33        35.57         8.48         8.55         9.27         8.28 
TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OX TCGA-EW-A1OZ TCGA-EW-A1P0 TCGA-EW-A1P3 
        7.46        19.56        18.48        30.94        36.85        32.45 
TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PA TCGA-EW-A1PD TCGA-EW-A1PE TCGA-EW-A2FW 
       12.00        10.26         8.78         5.72         3.48         6.25 
TCGA-GM-A2D9 TCGA-GM-A2DA TCGA-GM-A2DM TCGA-GM-A3NY 
       59.57       194.27        76.64        24.43 

$subtype3
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T 
       31.79        28.01        19.17        17.98        41.92        64.11 
TCGA-A2-A04U TCGA-A2-A04X TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CW TCGA-A2-A0CY 
       22.03        44.35        60.07        24.79        57.53        42.35 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0SW TCGA-A2-A0T0 
       21.14        25.84        25.02        67.50        44.84        11.08 
TCGA-A2-A0T2 TCGA-A2-A0YG TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A2-A25F TCGA-A7-A0CE 
        7.96        13.28        21.73        12.20         3.72         8.32 
TCGA-A7-A0CJ TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26I 
        6.18        12.26         8.78         9.44         8.45         4.01 
TCGA-A7-A3RF TCGA-A8-A06O TCGA-A8-A06R TCGA-A8-A076 TCGA-A8-A07C TCGA-A8-A07G 
        1.78        13.02        17.95        53.95        19.07        18.94 
TCGA-A8-A07I TCGA-A8-A07L TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A07W 
       14.01        17.00         9.99         8.98         9.96         9.99 
TCGA-A8-A082 TCGA-A8-A08B TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08R TCGA-A8-A08S 
       18.05        23.08        37.05         9.99         0.99        19.07 
TCGA-A8-A08X TCGA-A8-A09I TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A09X TCGA-A8-A0A7 
       33.99        33.07        25.02         8.98        14.01         0.99 
TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AN-A03Y TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AJ 
       38.53         1.02         0.33         1.78         1.71         7.99 
TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FT 
        6.48         0.16         0.30         7.92         7.56         6.02 
TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0FX TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0G0 
        0.33         0.36         0.33         0.33         0.33         0.53 
TCGA-AN-A0XO TCGA-AN-A0XU TCGA-AO-A03O TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J4 
       12.33         0.33        81.63        59.05        19.23         9.67 
TCGA-AO-A0J6 TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D 
       25.48        64.60        43.36       102.54        96.10        64.04 
TCGA-AO-A12F TCGA-AO-A1KQ TCGA-AO-A1KR TCGA-AO-A1KS TCGA-AQ-A04L TCGA-AQ-A0Y5 
       48.36        49.94        70.36         0.53       109.94         5.62 
TCGA-AR-A0TP TCGA-AR-A0TQ TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0U1 TCGA-AR-A0U2 
       78.64        49.32        37.41        55.20         6.08        83.87 
TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY 
       53.49        75.55        61.84        43.04        17.19        20.19 
TCGA-AR-A24H TCGA-AR-A24Q TCGA-AR-A24S TCGA-AR-A251 TCGA-AR-A254 TCGA-AR-A256 
      109.58        66.02        62.07        45.14        39.85        93.83 
TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0I9 TCGA-B6-A0IE TCGA-B6-A0IJ 
       77.62       125.79        32.58        12.13        65.69       176.98 
TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0WX TCGA-B6-A0WY 
      127.27       211.53       100.67        89.46        21.47       113.75 
TCGA-B6-A0X7 TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B9 
       58.88       101.52        38.79        20.45        39.55        51.68 
TCGA-BH-A0BG TCGA-BH-A0BT TCGA-BH-A0BW TCGA-BH-A0C0 TCGA-BH-A0DD TCGA-BH-A0DL 
       24.85        45.57        11.67        41.75        45.80        48.23 
TCGA-BH-A0DZ TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A0GY TCGA-BH-A0WA 
       16.27         4.37         9.60        31.00        30.15        12.23 
TCGA-BH-A18G TCGA-BH-A18L TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18U 
        2.01        26.66        55.63        37.51         7.36        51.39 
TCGA-BH-A18V TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FM TCGA-BH-A1FN TCGA-BH-A203 
       51.12        97.48       114.12        45.63        72.07        38.60 
TCGA-BH-A209 TCGA-C8-A137 TCGA-C8-A1HJ TCGA-C8-A1HM TCGA-C8-A275 TCGA-C8-A278 
      130.16         0.10         0.16         0.20         0.03         0.03 
TCGA-C8-A27A TCGA-C8-A27B TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 
       12.20         0.99         8.68         6.90         2.01         5.65 
TCGA-D8-A147 TCGA-D8-A1JA TCGA-D8-A1JC TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL 
        0.07         0.59         5.85         6.15         3.58         8.71 
TCGA-D8-A1X5 TCGA-D8-A1XF TCGA-D8-A1XJ TCGA-D8-A1XK TCGA-D8-A1XL TCGA-D8-A1XQ 
        5.62         6.48        11.57        10.72        10.49         5.82 
TCGA-D8-A1XT TCGA-D8-A1XV TCGA-D8-A1XW TCGA-D8-A1XZ TCGA-D8-A1Y3 TCGA-D8-A27F 
        6.35         4.80         3.85         3.95         4.08         7.46 
TCGA-D8-A27H TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A14X 
        4.60        16.01        27.78        24.59        27.39        22.75 
TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A15A TCGA-E2-A1AZ 
       22.62        19.43        14.79        16.93        16.50        64.57 
TCGA-E2-A1B0 TCGA-E2-A1II TCGA-E2-A1L7 TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI 
       41.79        27.95        20.81        11.51        94.52        90.41 
TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1R2 TCGA-E9-A1R5 TCGA-E9-A1RB 
        8.75        33.34         7.86         0.62         1.38         0.69 
TCGA-E9-A1RF TCGA-E9-A1RH TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A248 TCGA-E9-A249 
        1.25         0.46         1.41         0.66         0.69         0.92 
TCGA-E9-A2JS TCGA-EW-A1OV TCGA-EW-A1OW TCGA-EW-A1OY TCGA-EW-A1P4 TCGA-EW-A1P8 
        0.43        17.16        15.22        19.50        16.47         7.86 
TCGA-EW-A1PB TCGA-EW-A1PC TCGA-EW-A1PH TCGA-EW-A2FR TCGA-GI-A2C9 TCGA-GM-A2DH 
       19.99         6.12         4.57        36.82        23.11        42.28 

subtype1 subtype2 subtype3 
    0.36     0.03     0.03 
subtype1 subtype2 subtype3 
  159.12   223.40   211.53 
subtype1 subtype2 subtype3 
  25.745   17.885   17.965 
[1] "0.4 - 159.1 (25.7)" "0.0 - 223.4 (17.9)" "0.0 - 211.5 (18.0)"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [19] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
 [37] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [43] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [49] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [91] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
 [97] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[109] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[115] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[121] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[133] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[139] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[157] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[193] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[199] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[205] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[217] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[223] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[235] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[253] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[265] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[271] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[277] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[283] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[289] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[295] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[307] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[313] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[319] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[325] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[337] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[349] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[361] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[373] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[385] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[403] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[409] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[415] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[421] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[427] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[433] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[439] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[445] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[451] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[457] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[463] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[469] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[481] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[487] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[493] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[499] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[505] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[511] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[517] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[523] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[529] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[535] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[541] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[547] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[553] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[559] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[565] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[571] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[577] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[583] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[589] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[595] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[601] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[607] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[613] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[619] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[625] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[631] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[643] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[649] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[655] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[661] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[667] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[673] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[679] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[685] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[697] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[703] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[709] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[715] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[721] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[727] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[733] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[739] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[745] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[751] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[757] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[763] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[769] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[775] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[781] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[787] "subtype1" "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [19] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
 [37] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [43] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [49] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [91] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
 [97] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[109] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[115] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[121] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[133] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[139] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[157] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[193] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[199] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[205] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[217] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[223] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[235] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[253] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[265] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[271] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[277] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[283] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[289] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[295] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[307] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[313] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[319] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[325] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[337] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[349] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[361] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[373] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[385] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[403] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[409] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[415] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[421] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[427] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[433] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[439] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[445] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[451] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[457] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[463] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[469] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[481] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[487] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[493] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[499] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[505] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[511] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[517] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[523] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[529] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[535] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[541] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[547] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[553] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[559] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[565] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[571] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[577] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[583] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[589] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[595] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[601] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[607] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[613] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[619] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[625] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[631] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[643] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[649] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[655] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[661] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[667] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[673] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[679] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[685] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[697] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[703] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[709] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[715] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[721] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[727] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[733] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[739] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[745] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[751] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[757] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[763] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[769] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[775] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[781] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[787] "subtype1" "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [19] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
 [37] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [43] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [49] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [91] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
 [97] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[109] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[115] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[121] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[133] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[139] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[157] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[193] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[199] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[205] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[217] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[223] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[235] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[253] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[265] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[271] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[277] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[283] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[289] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[295] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[307] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[313] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[319] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[325] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[337] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[349] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[361] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[373] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[385] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[403] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[409] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[415] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[421] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[427] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[433] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[439] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[445] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[451] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[457] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[463] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[469] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[481] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[487] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[493] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[499] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[505] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[511] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[517] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[523] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[529] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[535] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[541] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[547] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[553] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[559] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[565] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[571] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[577] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[583] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[589] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[595] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[601] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[607] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[613] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[619] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[625] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[631] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[643] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[649] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[655] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[661] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[667] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[673] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[679] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[685] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[697] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[703] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[709] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[715] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[721] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[727] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[733] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[739] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[745] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[751] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[757] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[763] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[769] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[775] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[781] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[787] "subtype1" "subtype2"
D9V2, continuous
D9V3, binary
          cls
clus         0   1
  subtype1 173   0
  subtype2 425   6
  subtype3 240   3
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  173    0
  subtype2  425    6
  subtype3  240    3
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      173      425      240
  MALE          0        6        3
D9V4, binary
          cls
clus         0   1
  subtype1  34 139
  subtype2 114 317
  subtype3  57 186
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   34  139
  subtype2  114  317
  subtype3   57  186
     clus
vv    subtype1 subtype2 subtype3
  NO        34      114       57
  YES      139      317      186
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        1 154   1  17
  subtype2        1 386   7  37
  subtype3        0 215   6  22
D9V5, multiclass
          vv
clus        N0 N0 (I+) N0 (I-) N0 (MOL+)  N1 N1A N1B N1C N1MI  N2 N2A  N3 N3A
  subtype1  48      10      27         1  18  24   7   1    9   2  11   6   8
  subtype2 119       9      62         0  49  80  17   1   10  30  23   8  12
  subtype3  81       3      39         0  34  21   8   0    4  18  16   4   9
          vv
clus       N3B N3C  NX
  subtype1   1   0   0
  subtype2   0   0  11
  subtype3   1   1   4
D9V6, multiclass
D9V7, continuous
D9V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      26       14        1        6        54        35         1
  subtype2      36       36        5        1       137       103         1
  subtype3      10       13        2        1        99        49         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         17          4         14        1         0       0
  subtype2         64         16         13        7         0      12
  subtype3         39          4         13        6         1       5
D9V9, multiclass

Clustering(10) Variable = MIRSEQ_CHIERARCHICAL
D10V1, survival
          sevent
clus2        0   1
  subtype1 153  28
  subtype2 495  61
  subtype3  45   6
subtype1 subtype2 subtype3 
     181      556       51 
subtype1 subtype2 subtype3 
      28       61        6 
$subtype1
TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T TCGA-A2-A04U 
       28.01        19.17        17.98        41.92        64.11        22.03 
TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CY TCGA-A2-A0D0 TCGA-A2-A0D2 TCGA-A2-A0EQ 
       60.07        24.79        42.35        21.14        25.02        67.50 
TCGA-A2-A0EV TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YM 
       17.92        54.02        42.35        11.08         7.96        21.73 
TCGA-A2-A1G1 TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F 
       12.20         8.32        12.26         8.78         9.44         8.45 
TCGA-A7-A26G TCGA-A7-A26I TCGA-A8-A06R TCGA-A8-A06U TCGA-A8-A07C TCGA-A8-A07O 
        6.87         4.01        17.95        29.00        19.07         9.99 
TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A07W TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A097 
        8.98         9.96         9.99         0.99        33.99        12.00 
TCGA-A8-A09K TCGA-A8-A09X TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AC-A2QJ TCGA-AN-A04C 
       29.95        14.01        38.53         1.02         2.27         1.78 
TCGA-AN-A0AL TCGA-AN-A0AR TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FW TCGA-AN-A0FX 
        6.48         0.30         7.92         7.56         0.36         0.33 
TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J2 
        0.33         0.33         0.53         0.33        59.05        19.23 
TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D 
        9.67        25.48        43.36       102.54        96.10        64.04 
TCGA-AO-A12F TCGA-AO-A1KR TCGA-AO-A1KS TCGA-AQ-A04J TCGA-AQ-A0Y5 TCGA-AR-A0TP 
       48.36        70.36         0.53         5.23         5.62        78.64 
TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TY TCGA-AR-A0U1 TCGA-AR-A0U4 TCGA-AR-A1AH 
       37.41        55.20        55.86         6.08        53.49        75.55 
TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AX 
       61.84        52.73        43.53        43.04        17.19        36.26 
TCGA-AR-A1AY TCGA-AR-A24Q TCGA-AR-A24S TCGA-AR-A251 TCGA-AR-A256 TCGA-AR-A2LR 
       20.19        66.02        62.07        45.14        93.83        20.38 
TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0I9 TCGA-B6-A0IJ TCGA-B6-A0IQ 
       77.62       125.79        32.58        12.13       176.98       127.27 
TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0X7 TCGA-B6-A1KF 
      211.53       100.67        89.46       131.21        58.88       101.52 
TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BG 
       38.79        20.45        39.55        56.98        51.68        24.85 
TCGA-BH-A0BL TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A0DZ TCGA-BH-A0E0 TCGA-BH-A0E6 
       44.02        11.67        48.23        16.27         4.37         9.60 
TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18Q TCGA-BH-A18T TCGA-BH-A18U 
        5.59        12.23         2.01        55.63         7.36        51.39 
TCGA-BH-A18V TCGA-BH-A1F0 TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FU TCGA-BH-A203 
       51.12        25.81        97.48       114.12        72.07        38.60 
TCGA-BH-A208 TCGA-C8-A1HJ TCGA-C8-A1HN TCGA-C8-A26X TCGA-C8-A27B TCGA-D8-A13Z 
       57.83         0.16         0.07         0.36         0.99         6.90 
TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1JC TCGA-D8-A1JF TCGA-D8-A1JG 
        2.01         5.65         0.07         5.85         3.16         6.15 
TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1XK TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW 
        3.58         8.71        10.72         5.82         6.35         3.85 
TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M TCGA-D8-A27R TCGA-E2-A14N TCGA-E2-A14P 
        7.46         4.60         4.73         2.96        44.38        16.01 
TCGA-E2-A14R TCGA-E2-A14W TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A158 
       27.78        27.39        22.75        22.62        19.43        14.79 
TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B6 TCGA-E2-A1II TCGA-E2-A1LA 
       16.93        64.57        41.79        11.11        27.95        15.22 
TCGA-E2-A1LB TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK 
       31.96        28.90        11.51        94.52        90.41         8.75 
TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1RH TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A248 
       33.34         7.86         0.46         1.41         0.66         0.69 
TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PH 
       15.22        16.47        20.88         7.86        19.99         4.57 
TCGA-EW-A2FR TCGA-GI-A2C9 TCGA-GM-A2DA TCGA-GM-A2DB TCGA-GM-A2DD TCGA-GM-A2DF 
       36.82        23.11       194.27        53.10        43.04        42.71 
TCGA-GM-A2DH 
       42.28 

$subtype2
TCGA-A1-A0SB TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SH 
        8.52        14.37        43.40        48.10        14.24        47.24 
TCGA-A1-A0SI TCGA-A1-A0SJ TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04N TCGA-A2-A04R 
       20.84        14.01        39.32        18.18       103.66        77.72 
TCGA-A2-A04V TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A04Y TCGA-A2-A0CP TCGA-A2-A0CQ 
       63.12        63.06        44.35        25.08        82.03        78.64 
TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU TCGA-A2-A0CV TCGA-A2-A0CZ TCGA-A2-A0D1 
       75.55        63.02         5.16        61.48        43.99        25.84 
TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0ER 
       24.20        16.31        90.64        82.68        71.70        62.53 
TCGA-A2-A0ES TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0SU 
       32.91        26.53        24.10        25.32        18.05        44.42 
TCGA-A2-A0SW TCGA-A2-A0SY TCGA-A2-A0T1 TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T5 
       44.84        37.94        10.59        14.99        12.99        10.55 
TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YG 
       11.31        13.05        21.14        18.08         9.50        13.28 
TCGA-A2-A0YH TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A0YT TCGA-A2-A1FV 
       12.46        11.77        10.98         8.81        23.77        15.12 
TCGA-A2-A1FW TCGA-A2-A1FX TCGA-A2-A1FZ TCGA-A2-A1G0 TCGA-A2-A1G4 TCGA-A2-A1G6 
        7.27        30.74        13.45        12.49        12.23         4.34 
TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25D TCGA-A2-A25E 
       42.25        97.58         8.48         9.37         7.99        82.55 
TCGA-A2-A25F TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A7-A0CD TCGA-A7-A0CG TCGA-A7-A0CH 
        3.72        11.93        26.40         5.59         5.46         5.29 
TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A0DB TCGA-A7-A13F TCGA-A7-A13G TCGA-A7-A26E 
        6.18         5.23         4.60         6.44         6.84        13.84 
TCGA-A7-A26H TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3IY TCGA-A7-A3IZ TCGA-A7-A3J0 
        2.10         2.20         5.95         4.96         4.87         2.50 
TCGA-A7-A3J1 TCGA-A7-A3RF TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06T 
        2.47         1.78        13.02        13.02         1.02        41.06 
TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07E TCGA-A8-A07F 
       26.01         1.02        53.95         9.01        19.99        18.94 
TCGA-A8-A07G TCGA-A8-A07I TCGA-A8-A07J TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S 
       18.94        14.01        12.00        17.00        10.98         7.96 
TCGA-A8-A07Z TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G 
       28.04        15.06        36.95        13.02         0.99        19.92 
TCGA-A8-A08I TCGA-A8-A08L TCGA-A8-A08O TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A08Z 
       12.00         9.99        30.97        19.07        93.04        40.01 
TCGA-A8-A091 TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A099 TCGA-A8-A09A 
       19.07        17.03        17.92        41.95         9.99         9.99 
TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09D TCGA-A8-A09E TCGA-A8-A09I TCGA-A8-A09M 
       12.00         1.02        13.02        30.97        33.07        15.02 
TCGA-A8-A09N TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A09T TCGA-A8-A0A1 TCGA-A8-A0A2 
        1.02        25.02         8.98        19.00        12.00        19.00 
TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-A8-A0A9 TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AC-A23E 
       13.02        21.04        13.02        17.00        38.04         2.37 
TCGA-AC-A23G TCGA-AC-A23H TCGA-AC-A2B8 TCGA-AC-A2BM TCGA-AC-A2FB TCGA-AC-A2FF 
       10.82         2.66         1.45        38.20         1.45        55.40 
TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FM TCGA-AC-A2FO TCGA-AC-A2QI TCGA-AC-A3BB 
       36.99        38.79        26.04        50.70         0.92         0.99 
TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AC-A3TN TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 
        0.69         1.15         1.12         0.33         0.33         0.23 
TCGA-AN-A046 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AK TCGA-AN-A0AM TCGA-AN-A0AS 
        0.33         0.62         2.93         7.33         0.16         0.30 
TCGA-AN-A0FD TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0FT 
        6.41         4.60         6.97         7.17         6.28         6.02 
TCGA-AN-A0XL TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AN-A0XT 
        0.33        12.33         0.30         0.33         0.33         0.33 
TCGA-AN-A0XV TCGA-AN-A0XW TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A03R TCGA-AO-A03T 
        5.33         5.59        54.08        81.63        56.12        39.02 
TCGA-AO-A0J3 TCGA-AO-A0J5 TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JA 
        9.93        24.16         8.55         9.11        41.26        11.38 
TCGA-AO-A0JB TCGA-AO-A0JC TCGA-AO-A0JD TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JI 
       37.81        50.86        59.61        11.64        14.76        38.53 
TCGA-AO-A0JJ TCGA-AO-A0JM TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A128 TCGA-AO-A12A 
       49.71        60.03        99.22        93.70        94.59        90.54 
TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12E TCGA-AO-A12G TCGA-AO-A12H TCGA-AO-A1KO 
       77.56        65.52        57.27        41.59        28.34        14.73 
TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A1H2 TCGA-AQ-A1H3 
       82.62        49.94        17.79        14.43         7.56         4.54 
TCGA-AR-A0TQ TCGA-AR-A0TR TCGA-AR-A0TV TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 
       49.32         5.26        29.72        43.17        83.87        74.40 
TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AN TCGA-AR-A1AP TCGA-AR-A1AT TCGA-AR-A1AV 
       51.22        48.82        43.69        39.95        41.82        42.58 
TCGA-AR-A1AW TCGA-AR-A24H TCGA-AR-A24K TCGA-AR-A24L TCGA-AR-A24M TCGA-AR-A24N 
       35.24       109.58        50.89        73.02        65.42        68.19 
TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24R TCGA-AR-A24T TCGA-AR-A24U TCGA-AR-A24V 
       65.65         0.85        57.37        53.26        53.36        54.18 
TCGA-AR-A24W TCGA-AR-A24X TCGA-AR-A250 TCGA-AR-A252 TCGA-AR-A255 TCGA-AR-A2LE 
       50.96        48.16        56.12        40.64        34.78       128.65 
TCGA-AR-A2LH TCGA-AR-A2LK TCGA-AR-A2LL TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
       20.22        42.84         7.33        40.01        17.06        20.81 
TCGA-AR-A2LQ TCGA-B6-A0I5 TCGA-B6-A0I8 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC 
       16.96       149.56        24.62       220.87       129.57        50.70 
TCGA-B6-A0IE TCGA-B6-A0IG TCGA-B6-A0IH TCGA-B6-A0IK TCGA-B6-A0IM TCGA-B6-A0IN 
       65.69       146.50       112.37        18.77       126.12        84.59 
TCGA-B6-A0IO TCGA-B6-A0IP TCGA-B6-A0RG TCGA-B6-A0RH TCGA-B6-A0RI TCGA-B6-A0RL 
      110.14       110.93        68.45       188.98       223.40        81.17 
TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0RQ TCGA-B6-A0RV 
       78.02       172.96       162.02       102.77       140.48       157.41 
TCGA-B6-A0WS TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WX TCGA-B6-A0WZ 
       97.48       177.40        79.63        17.95        21.47       129.57 
TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A1KC TCGA-B6-A1KI TCGA-B6-A1KN 
      129.70        28.24        68.94        43.59        48.10       109.48 
TCGA-B6-A2IU TCGA-BH-A0AU TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B1 
      159.12        24.53        25.55        28.50        46.92        37.74 
TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0B6 TCGA-BH-A0B8 TCGA-BH-A0BA TCGA-BH-A0BC 
       39.16        48.36        56.94        51.58        37.22        32.02 
TCGA-BH-A0BD TCGA-BH-A0BF TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BQ 
       18.21        25.68        21.70        36.72        35.67        27.16 
TCGA-BH-A0BR TCGA-BH-A0BS TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0BZ TCGA-BH-A0C0 
       53.65        53.92        45.57        49.94        49.05        41.75 
TCGA-BH-A0C1 TCGA-BH-A0C3 TCGA-BH-A0C7 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DH 
       43.99        48.13        42.90        31.17        23.44        38.01 
TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DO TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DS 
       22.13        13.91        17.26        15.65         3.22         2.53 
TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX TCGA-BH-A0E1 TCGA-BH-A0E7 TCGA-BH-A0E9 
       38.47        45.17        47.41        15.68        44.78        46.19 
TCGA-BH-A0EA TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H3 
       32.65        24.43        30.15        10.78        15.16        37.78 
TCGA-BH-A0H5 TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HF 
       35.51        24.56        23.05        28.14        26.50        23.90 
TCGA-BH-A0HI TCGA-BH-A0HK TCGA-BH-A0HO TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0HU 
       20.35         5.85         2.50        13.61        36.85        12.89 
TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A0W4 TCGA-BH-A0W5 
       51.29        27.25        28.50         5.92         5.75        17.85 
TCGA-BH-A0W7 TCGA-BH-A18F TCGA-BH-A18I TCGA-BH-A18J TCGA-BH-A18K TCGA-BH-A18L 
       18.35         8.81         7.23        20.09        90.81        26.66 
TCGA-BH-A18M TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A1EN 
       72.56        37.74        30.28        37.51        66.05        67.46 
TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EV TCGA-BH-A1EW 
       91.99       113.82        82.85        42.28        12.00        55.69 
TCGA-BH-A1EX TCGA-BH-A1EY TCGA-BH-A1F2 TCGA-BH-A1F5 TCGA-BH-A1F8 TCGA-BH-A1FB 
       49.58        17.69        31.53        89.16        24.62       120.62 
TCGA-BH-A1FE TCGA-BH-A1FG TCGA-BH-A1FH TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FR 
       74.73       122.89        36.92        55.00        45.63       144.59 
TCGA-BH-A201 TCGA-BH-A202 TCGA-BH-A204 TCGA-BH-A209 TCGA-BH-A28O TCGA-BH-A28Q 
        6.87         0.72        83.31       130.16        10.62         6.44 
TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HI TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HM 
        0.10         0.23         0.07         0.23         0.07         0.20 
TCGA-C8-A26V TCGA-C8-A26W TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A27A TCGA-D8-A13Y 
        0.30         0.23         0.13         0.20        12.20         8.68 
TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A145 TCGA-D8-A146 TCGA-D8-A1J8 TCGA-D8-A1JD 
        0.89         3.72         1.61        11.31         8.42         8.98 
TCGA-D8-A1JE TCGA-D8-A1JH TCGA-D8-A1JI TCGA-D8-A1JN TCGA-D8-A1JP TCGA-D8-A1JS 
        1.87         9.34         0.69         7.13         5.49         3.45 
TCGA-D8-A1JT TCGA-D8-A1JU TCGA-D8-A1X5 TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1X8 
        4.04         3.48         5.62         7.76         2.79         8.94 
TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XD TCGA-D8-A1XG 
       12.49         9.01         6.61         2.66         5.10         6.44 
TCGA-D8-A1XJ TCGA-D8-A1XL TCGA-D8-A1XM TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS 
       11.57        10.49         7.17         7.96         5.52         0.59 
TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XY TCGA-D8-A1Y0 TCGA-D8-A1Y1 TCGA-D8-A1Y2 
        4.90         4.80         2.66         5.46         3.78         2.37 
TCGA-D8-A1Y3 TCGA-D8-A27E TCGA-D8-A27G TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L 
        4.08         5.98         6.87         6.08         3.88         4.11 
TCGA-D8-A27N TCGA-D8-A27P TCGA-D8-A27T TCGA-D8-A27V TCGA-D8-A27W TCGA-E2-A105 
        4.77         0.72         4.44         2.40         0.49        38.24 
TCGA-E2-A106 TCGA-E2-A107 TCGA-E2-A108 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B 
       51.12        25.08         4.08        38.53        11.57        24.59 
TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A14O TCGA-E2-A14Q TCGA-E2-A14S 
       28.04        13.74        11.84        38.53        32.02        27.42 
TCGA-E2-A14T TCGA-E2-A14U TCGA-E2-A14V TCGA-E2-A14Z TCGA-E2-A153 TCGA-E2-A154 
       29.26        27.55        24.59        17.03        19.27        10.68 
TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15E 
       18.18        15.81        16.50        16.31        10.36        17.00 
TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15L TCGA-E2-A15O 
       15.39        10.36        13.51        15.22        10.88        12.99 
TCGA-E2-A15P TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B1 TCGA-E2-A1B4 
       10.36        10.85         9.01         8.78        44.75        29.95 
TCGA-E2-A1B5 TCGA-E2-A1BC TCGA-E2-A1BD TCGA-E2-A1IE TCGA-E2-A1IF TCGA-E2-A1IG 
       25.45         9.76        10.42        32.32        31.43        24.82 
TCGA-E2-A1IH TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO 
       21.63        23.84        17.03         0.46        12.89        14.73 
TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L7 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A2P5 
        4.18        43.13        20.81        33.37        12.76        10.72 
TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E9-A1R2 TCGA-E9-A1R3 TCGA-E9-A1R6 TCGA-E9-A1R7 
        5.49         7.13         0.62         2.10         2.76         1.12 
TCGA-E9-A1RA TCGA-E9-A1RB TCGA-E9-A1RC TCGA-E9-A1RD TCGA-E9-A1RE TCGA-E9-A1RF 
        0.95         0.69        40.37         0.66         1.55         1.25 
TCGA-E9-A1RG TCGA-E9-A1RI TCGA-E9-A226 TCGA-E9-A227 TCGA-E9-A245 TCGA-E9-A247 
        1.15         1.58         0.53         0.79         0.82         0.39 
TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A295 TCGA-E9-A2JS TCGA-E9-A2JT TCGA-EW-A1IW 
        0.92         0.33         0.69         0.43         0.76         8.28 
TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1J1 TCGA-EW-A1J2 TCGA-EW-A1J3 
       35.57         8.48         8.55         9.27         4.57         8.28 
TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OV TCGA-EW-A1OX TCGA-EW-A1OZ TCGA-EW-A1P0 
        7.46        19.56        17.16        18.48        30.94        36.85 
TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PA TCGA-EW-A1PD 
       30.21        32.45        12.00        10.26         8.78         5.72 
TCGA-EW-A1PE TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A2FS TCGA-EW-A2FW TCGA-GI-A2C8 
        3.48         4.57        28.77        38.56         6.25         6.97 
TCGA-GM-A2D9 TCGA-GM-A2DC TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DM 
       59.57        53.52        61.91        62.33        90.81        76.64 
TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NW TCGA-GM-A3NY 
       77.33        53.33        98.04        24.43 

$subtype3
TCGA-A1-A0SK TCGA-A1-A0SM TCGA-A2-A0CW TCGA-A2-A0EY TCGA-A2-A0SV TCGA-A8-A075 
       31.79         7.96        57.53        15.95        27.12        17.00 
TCGA-A8-A07B TCGA-A8-A082 TCGA-A8-A08B TCGA-A8-A08J TCGA-A8-A0A7 TCGA-AC-A23C 
       33.01        18.05        23.08        37.05         0.99         0.95 
TCGA-AN-A04D TCGA-AN-A0AJ TCGA-AN-A0FV TCGA-AN-A0XN TCGA-AO-A03L TCGA-AO-A03M 
        1.71         7.99         0.33         0.33        80.28        47.84 
TCGA-AO-A03V TCGA-AO-A0JE TCGA-AQ-A04L TCGA-AR-A0TX TCGA-AR-A1AS TCGA-AR-A1AU 
       29.13        64.60       109.94         0.49        40.83        46.32 
TCGA-AR-A24Z TCGA-AR-A254 TCGA-B6-A0WY TCGA-BH-A0BP TCGA-BH-A0DD TCGA-BH-A0EE 
       51.75        39.85       113.75        48.69        45.80        31.00 
TCGA-BH-A0H9 TCGA-BH-A1FJ TCGA-BH-A1FN TCGA-C8-A26Y TCGA-C8-A274 TCGA-C8-A275 
       41.00        63.35        72.07         0.43         0.03         0.03 
TCGA-C8-A278 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JJ TCGA-D8-A1XF TCGA-D8-A1XZ 
        0.03         8.15         0.59         9.01         6.48         3.95 
TCGA-E2-A152 TCGA-E2-A15H TCGA-E2-A15K TCGA-E2-A15M TCGA-E9-A1R4 TCGA-E9-A1R5 
       19.33         1.38         1.12         7.69         0.95         1.38 
TCGA-EW-A1OY TCGA-EW-A1PC TCGA-EW-A2FV 
       19.50         6.12         7.82 

subtype1 subtype2 subtype3 
    0.07     0.07     0.03 
subtype1 subtype2 subtype3 
  211.53   223.40   113.75 
subtype1 subtype2 subtype3 
   20.19    18.18    17.00 
[1] "0.1 - 211.5 (20.2)" "0.1 - 223.4 (18.2)" "0.0 - 113.8 (17.0)"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
 [13] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
 [19] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [25] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [37] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [43] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [55] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [61] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [97] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[103] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[121] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[139] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[157] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[199] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[205] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[217] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[223] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[229] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[235] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[247] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[253] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[265] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[271] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[277] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[283] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[289] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[295] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[301] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[307] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[319] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[325] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[337] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[343] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[349] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[361] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[373] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[385] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[409] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[415] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[421] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[427] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[433] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[439] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[445] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[451] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[457] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[463] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[469] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[481] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[487] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[493] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[499] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[505] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[511] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[517] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[523] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[529] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[535] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[541] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[547] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[553] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[559] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[565] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[571] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[577] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[583] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[589] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[595] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[601] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[607] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[613] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[619] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[625] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[631] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[643] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[649] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[655] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[661] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[667] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[673] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[679] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[685] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[697] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[703] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[709] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[715] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[721] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[727] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[733] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[739] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[745] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[751] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[757] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[763] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[769] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[775] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[781] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[787] "subtype2" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
 [13] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
 [19] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [25] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [37] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [43] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [55] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [61] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [97] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[103] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[121] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[139] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[157] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[199] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[205] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[217] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[223] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[229] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[235] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[247] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[253] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[265] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[271] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[277] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[283] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[289] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[295] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[301] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[307] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[319] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[325] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[337] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[343] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[349] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[361] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[373] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[385] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[409] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[415] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[421] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[427] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[433] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[439] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[445] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[451] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[457] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[463] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[469] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[481] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[487] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[493] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[499] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[505] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[511] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[517] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[523] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[529] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[535] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[541] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[547] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[553] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[559] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[565] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[571] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[577] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[583] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[589] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[595] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[601] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[607] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[613] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[619] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[625] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[631] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[643] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[649] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[655] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[661] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[667] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[673] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[679] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[685] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[697] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[703] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[709] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[715] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[721] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[727] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[733] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[739] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[745] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[751] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[757] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[763] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[769] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[775] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[781] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[787] "subtype2" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
 [13] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
 [19] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [25] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [37] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [43] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [55] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [61] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [97] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[103] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[121] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[139] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[157] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[199] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[205] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[217] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[223] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[229] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[235] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[247] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[253] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[265] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[271] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[277] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[283] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[289] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[295] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[301] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[307] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[319] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[325] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[337] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[343] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[349] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[361] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[373] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[385] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[409] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[415] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[421] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[427] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[433] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[439] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[445] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[451] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[457] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[463] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[469] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[481] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[487] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[493] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[499] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[505] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[511] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[517] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[523] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[529] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[535] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[541] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[547] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[553] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[559] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[565] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[571] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[577] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[583] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[589] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[595] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[601] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[607] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[613] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[619] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[625] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[631] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[643] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[649] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[655] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[661] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[667] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[673] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[679] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[685] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[697] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[703] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[709] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[715] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[721] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[727] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[733] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[739] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[745] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[751] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[757] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[763] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[769] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[775] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[781] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[787] "subtype2" "subtype2"
D10V2, continuous
D10V3, binary
          cls
clus         0   1
  subtype1 193   1
  subtype2 588   6
  subtype3  57   2
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  193    1
  subtype2  588    6
  subtype3   57    2
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      193      588       57
  MALE          1        6        2
D10V4, binary
          cls
clus         0   1
  subtype1  50 144
  subtype2 145 449
  subtype3  10  49
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   50  144
  subtype2  145  449
  subtype3   10   49
     clus
vv    subtype1 subtype2 subtype3
  NO        50      145       10
  YES      144      449       49
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 178   4  12
  subtype2        2 526   8  58
  subtype3        0  51   2   6
D10V5, multiclass
          vv
clus        N0 N0 (I+) N0 (I-) N0 (MOL+)  N1 N1A N1B N1C N1MI  N2 N2A  N3 N3A
  subtype1  66       5      36         0  24  17   7   1    1  11  11   2   8
  subtype2 160      17      84         1  70 101  23   1   21  33  36  15  20
  subtype3  22       0       8         0   7   7   2   0    1   6   3   1   1
          vv
clus       N3B N3C  NX
  subtype1   1   1   3
  subtype2   1   0  11
  subtype3   0   0   1
D10V6, multiclass
D10V7, continuous
D10V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      13       15        2        1        80        37         0
  subtype2      57       43        6        7       186       136         2
  subtype3       2        5        0        0        24        14         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         23          3         11        4         0       4
  subtype2         87         21         28        8         1      12
  subtype3         10          0          1        2         0       1
D10V9, multiclass
                                    V1.D 
                         "Time to Death" 
                                      V2 
                                   "AGE" 
                                      V3 
                                "GENDER" 
                                      V4 
"RADIATIONS.RADIATION.REGIMENINDICATION" 
                                      V5 
                    "DISTANT.METASTASIS" 
                                      V6 
                 "LYMPH.NODE.METASTASIS" 
                                      V7 
                 "NUMBER.OF.LYMPH.NODES" 
                                      V8 
                       "TUMOR.STAGECODE" 
                                      V9 
                 "NEOPLASM.DISEASESTAGE" 
> q(save="no")
