
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/334708/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/HNSC-TP/2666388/1.GDAC_mergedClustering.Finished/HNSC-TP.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=HNSC-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=HNSC-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=328, in cluster file=322, common to both=322
[1]  72 322
[1] "Amp Peak  1(1q21.2) mutation analysis"
[1] 3
  AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE 
                           76                           246 
  AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE 
                           76                           246 
[1] "Amp Peak  2(2q11.2) mutation analysis"
[1] 3
  AMP PEAK  2(2Q11.2) MUTATED AMP PEAK  2(2Q11.2) WILD-TYPE 
                           69                           253 
  AMP PEAK  2(2Q11.2) MUTATED AMP PEAK  2(2Q11.2) WILD-TYPE 
                           69                           253 
[1] "Amp Peak  3(2q31.2) mutation analysis"
[1] 3
  AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE 
                           67                           255 
  AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE 
                           67                           255 
[1] "Amp Peak  4(2q32.2) mutation analysis"
[1] 3
  AMP PEAK  4(2Q32.2) MUTATED AMP PEAK  4(2Q32.2) WILD-TYPE 
                           59                           263 
  AMP PEAK  4(2Q32.2) MUTATED AMP PEAK  4(2Q32.2) WILD-TYPE 
                           59                           263 
[1] "Amp Peak  5(3q26.33) mutation analysis"
[1] 3
  AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE 
                           242                             80 
  AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE 
                           242                             80 
[1] "Amp Peak  6(5p15.33) mutation analysis"
[1] 3
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                           147                            175 
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                           147                            175 
[1] "Amp Peak  7(5p12) mutation analysis"
[1] 3
  AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE 
                        122                         200 
  AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE 
                        122                         200 
[1] "Amp Peak  8(6p12.1) mutation analysis"
[1] 3
  AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE 
                           64                           258 
  AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE 
                           64                           258 
[1] "Amp Peak  9(6q12) mutation analysis"
[1] 3
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                         59                         263 
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                         59                         263 
[1] "Amp Peak 10(7p11.2) mutation analysis"
[1] 3
  AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE 
                          137                           185 
  AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE 
                          137                           185 
[1] "Amp Peak 11(7q22.1) mutation analysis"
[1] 3
  AMP PEAK 11(7Q22.1) MUTATED AMP PEAK 11(7Q22.1) WILD-TYPE 
                          114                           208 
  AMP PEAK 11(7Q22.1) MUTATED AMP PEAK 11(7Q22.1) WILD-TYPE 
                          114                           208 
[1] "Amp Peak 12(8p11.23) mutation analysis"
[1] 3
  AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE 
                           102                            220 
  AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE 
                           102                            220 
[1] "Amp Peak 13(8q11.21) mutation analysis"
[1] 3
  AMP PEAK 13(8Q11.21) MUTATED AMP PEAK 13(8Q11.21) WILD-TYPE 
                           189                            133 
  AMP PEAK 13(8Q11.21) MUTATED AMP PEAK 13(8Q11.21) WILD-TYPE 
                           189                            133 
[1] "Amp Peak 14(8q24.21) mutation analysis"
[1] 3
  AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE 
                           232                             90 
  AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE 
                           232                             90 
[1] "Amp Peak 15(9p23) mutation analysis"
[1] 3
  AMP PEAK 15(9P23) MUTATED AMP PEAK 15(9P23) WILD-TYPE 
                         76                         246 
  AMP PEAK 15(9P23) MUTATED AMP PEAK 15(9P23) WILD-TYPE 
                         76                         246 
[1] "Amp Peak 16(9p13.3) mutation analysis"
[1] 3
  AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE 
                           90                           232 
  AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE 
                           90                           232 
[1] "Amp Peak 17(11p13) mutation analysis"
[1] 3
  AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE 
                          63                          259 
  AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE 
                          63                          259 
[1] "Amp Peak 18(11p11.2) mutation analysis"
[1] 3
  AMP PEAK 18(11P11.2) MUTATED AMP PEAK 18(11P11.2) WILD-TYPE 
                            63                            259 
  AMP PEAK 18(11P11.2) MUTATED AMP PEAK 18(11P11.2) WILD-TYPE 
                            63                            259 
[1] "Amp Peak 19(11q13.3) mutation analysis"
[1] 3
  AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE 
                           146                            176 
  AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE 
                           146                            176 
[1] "Amp Peak 20(12p13.33) mutation analysis"
[1] 3
  AMP PEAK 20(12P13.33) MUTATED AMP PEAK 20(12P13.33) WILD-TYPE 
                            109                             213 
  AMP PEAK 20(12P13.33) MUTATED AMP PEAK 20(12P13.33) WILD-TYPE 
                            109                             213 
[1] "Amp Peak 21(12q15) mutation analysis"
[1] 3
  AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE 
                          63                          259 
  AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE 
                          63                          259 
[1] "Amp Peak 22(13q22.1) mutation analysis"
[1] 3
  AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE 
                            68                            254 
  AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE 
                            68                            254 
[1] "Amp Peak 23(14q11.2) mutation analysis"
[1] 3
  AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE 
                            88                            234 
  AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE 
                            88                            234 
[1] "Amp Peak 24(15q26.3) mutation analysis"
[1] 3
  AMP PEAK 24(15Q26.3) MUTATED AMP PEAK 24(15Q26.3) WILD-TYPE 
                            71                            251 
  AMP PEAK 24(15Q26.3) MUTATED AMP PEAK 24(15Q26.3) WILD-TYPE 
                            71                            251 
[1] "Amp Peak 25(17q12) mutation analysis"
[1] 3
  AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE 
                          56                          266 
  AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE 
                          56                          266 
[1] "Amp Peak 26(18p11.31) mutation analysis"
[1] 3
  AMP PEAK 26(18P11.31) MUTATED AMP PEAK 26(18P11.31) WILD-TYPE 
                            103                             219 
  AMP PEAK 26(18P11.31) MUTATED AMP PEAK 26(18P11.31) WILD-TYPE 
                            103                             219 
[1] "Amp Peak 27(18q11.2) mutation analysis"
[1] 3
  AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE 
                            71                            251 
  AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE 
                            71                            251 
[1] "Amp Peak 28(20q11.22) mutation analysis"
[1] 3
  AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE 
                            145                             177 
  AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE 
                            145                             177 
[1] "Amp Peak 29(Xq28) mutation analysis"
[1] 3
  AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE 
                         98                         224 
  AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE 
                         98                         224 
[1] "Del Peak  1(1p36.13) mutation analysis"
[1] 3
  DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE 
                            68                            254 
  DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE 
                            68                            254 
[1] "Del Peak  2(1p13.2) mutation analysis"
[1] 3
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                           81                           241 
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                           81                           241 
[1] "Del Peak  3(2q21.2) mutation analysis"
[1] 3
  DEL PEAK  3(2Q21.2) MUTATED DEL PEAK  3(2Q21.2) WILD-TYPE 
                           40                           282 
  DEL PEAK  3(2Q21.2) MUTATED DEL PEAK  3(2Q21.2) WILD-TYPE 
                           40                           282 
[1] "Del Peak  4(2q22.1) mutation analysis"
[1] 3
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                           66                           256 
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                           66                           256 
[1] "Del Peak  5(2q36.2) mutation analysis"
[1] 3
  DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE 
                           96                           226 
  DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE 
                           96                           226 
[1] "Del Peak  6(3p24.1) mutation analysis"
[1] 3
  DEL PEAK  6(3P24.1) MUTATED DEL PEAK  6(3P24.1) WILD-TYPE 
                          239                            83 
  DEL PEAK  6(3P24.1) MUTATED DEL PEAK  6(3P24.1) WILD-TYPE 
                          239                            83 
[1] "Del Peak  7(3p14.2) mutation analysis"
[1] 3
  DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE 
                          242                            80 
  DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE 
                          242                            80 
[1] "Del Peak  8(3p12.2) mutation analysis"
[1] 3
  DEL PEAK  8(3P12.2) MUTATED DEL PEAK  8(3P12.2) WILD-TYPE 
                          228                            94 
  DEL PEAK  8(3P12.2) MUTATED DEL PEAK  8(3P12.2) WILD-TYPE 
                          228                            94 
[1] "Del Peak  9(4p16.3) mutation analysis"
[1] 3
  DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE 
                          137                           185 
  DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE 
                          137                           185 
[1] "Del Peak 10(4p15.2) mutation analysis"
[1] 3
  DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE 
                          138                           184 
  DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE 
                          138                           184 
[1] "Del Peak 11(4q22.1) mutation analysis"
[1] 3
  DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE 
                          102                           220 
  DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE 
                          102                           220 
[1] "Del Peak 12(4q35.2) mutation analysis"
[1] 3
  DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE 
                          131                           191 
  DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE 
                          131                           191 
[1] "Del Peak 13(5q11.2) mutation analysis"
[1] 3
  DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE 
                          134                           188 
  DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE 
                          134                           188 
[1] "Del Peak 14(5q35.3) mutation analysis"
[1] 3
  DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE 
                          127                           195 
  DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE 
                          127                           195 
[1] "Del Peak 15(6p25.3) mutation analysis"
[1] 3
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                           64                           258 
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                           64                           258 
[1] "Del Peak 16(7q31.1) mutation analysis"
[1] 3
  DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE 
                           49                           273 
  DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE 
                           49                           273 
[1] "Del Peak 17(7q36.1) mutation analysis"
[1] 3
  DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE 
                           80                           242 
  DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE 
                           80                           242 
[1] "Del Peak 18(8p23.2) mutation analysis"
[1] 3
  DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE 
                          183                           139 
  DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE 
                          183                           139 
[1] "Del Peak 19(9p23) mutation analysis"
[1] 3
  DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE 
                        151                         171 
  DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE 
                        151                         171 
[1] "Del Peak 20(9p21.3) mutation analysis"
[1] 3
  DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE 
                          189                           133 
  DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE 
                          189                           133 
[1] "Del Peak 21(9q21.11) mutation analysis"
[1] 3
  DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE 
                            61                            261 
  DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE 
                            61                            261 
[1] "Del Peak 22(9q34.3) mutation analysis"
[1] 3
  DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE 
                           53                           269 
  DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE 
                           53                           269 
[1] "Del Peak 23(10p15.3) mutation analysis"
[1] 3
  DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE 
                           108                            214 
  DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE 
                           108                            214 
[1] "Del Peak 24(10p11.21) mutation analysis"
[1] 3
  DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE 
                            101                             221 
  DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE 
                            101                             221 
[1] "Del Peak 25(10q23.31) mutation analysis"
[1] 3
  DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE 
                             83                             239 
  DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE 
                             83                             239 
[1] "Del Peak 26(11p15.4) mutation analysis"
[1] 3
  DEL PEAK 26(11P15.4) MUTATED DEL PEAK 26(11P15.4) WILD-TYPE 
                           102                            220 
  DEL PEAK 26(11P15.4) MUTATED DEL PEAK 26(11P15.4) WILD-TYPE 
                           102                            220 
[1] "Del Peak 27(11q23.1) mutation analysis"
[1] 3
  DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE 
                           153                            169 
  DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE 
                           153                            169 
[1] "Del Peak 28(12q24.33) mutation analysis"
[1] 3
  DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE 
                             38                             284 
  DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE 
                             38                             284 
[1] "Del Peak 29(13q12.11) mutation analysis"
[1] 3
  DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE 
                            145                             177 
  DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE 
                            145                             177 
[1] "Del Peak 30(13q14.2) mutation analysis"
[1] 3
  DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE 
                           137                            185 
  DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE 
                           137                            185 
[1] "Del Peak 31(14q11.2) mutation analysis"
[1] 3
  DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE 
                            46                            276 
  DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE 
                            46                            276 
[1] "Del Peak 32(14q32.32) mutation analysis"
[1] 3
  DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE 
                             49                             273 
  DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE 
                             49                             273 
[1] "Del Peak 33(15q15.1) mutation analysis"
[1] 3
  DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE 
                            76                            246 
  DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE 
                            76                            246 
[1] "Del Peak 34(16q12.1) mutation analysis"
[1] 3
  DEL PEAK 34(16Q12.1) MUTATED DEL PEAK 34(16Q12.1) WILD-TYPE 
                            54                            268 
  DEL PEAK 34(16Q12.1) MUTATED DEL PEAK 34(16Q12.1) WILD-TYPE 
                            54                            268 
[1] "Del Peak 35(16q23.3) mutation analysis"
[1] 3
  DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE 
                            64                            258 
  DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE 
                            64                            258 
[1] "Del Peak 36(17q25.3) mutation analysis"
[1] 3
  DEL PEAK 36(17Q25.3) MUTATED DEL PEAK 36(17Q25.3) WILD-TYPE 
                            41                            281 
  DEL PEAK 36(17Q25.3) MUTATED DEL PEAK 36(17Q25.3) WILD-TYPE 
                            41                            281 
[1] "Del Peak 37(18q21.2) mutation analysis"
[1] 3
  DEL PEAK 37(18Q21.2) MUTATED DEL PEAK 37(18Q21.2) WILD-TYPE 
                           170                            152 
  DEL PEAK 37(18Q21.2) MUTATED DEL PEAK 37(18Q21.2) WILD-TYPE 
                           170                            152 
[1] "Del Peak 38(18q23) mutation analysis"
[1] 3
  DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE 
                         182                          140 
  DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE 
                         182                          140 
[1] "Del Peak 39(19p13.3) mutation analysis"
[1] 3
  DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE 
                           110                            212 
  DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE 
                           110                            212 
[1] "Del Peak 40(19q13.43) mutation analysis"
[1] 3
  DEL PEAK 40(19Q13.43) MUTATED DEL PEAK 40(19Q13.43) WILD-TYPE 
                             64                             258 
  DEL PEAK 40(19Q13.43) MUTATED DEL PEAK 40(19Q13.43) WILD-TYPE 
                             64                             258 
[1] "Del Peak 41(Xp21.3) mutation analysis"
[1] 3
  DEL PEAK 41(XP21.3) MUTATED DEL PEAK 41(XP21.3) WILD-TYPE 
                          106                           216 
  DEL PEAK 41(XP21.3) MUTATED DEL PEAK 41(XP21.3) WILD-TYPE 
                          106                           216 
[1] "Del Peak 42(Xp11.3) mutation analysis"
[1] 3
  DEL PEAK 42(XP11.3) MUTATED DEL PEAK 42(XP11.3) WILD-TYPE 
                          108                           214 
  DEL PEAK 42(XP11.3) MUTATED DEL PEAK 42(XP11.3) WILD-TYPE 
                          108                           214 
[1] "Del Peak 43(Xq21.33) mutation analysis"
[1] 3
  DEL PEAK 43(XQ21.33) MUTATED DEL PEAK 43(XQ21.33) WILD-TYPE 
                            55                            267 
  DEL PEAK 43(XQ21.33) MUTATED DEL PEAK 43(XQ21.33) WILD-TYPE 
                            55                            267 
[1] "data2feature, selection=ALL"
[1] "CN_CNMF"               "METHLYATION_CNMF"      "RPPA_CNMF"            
[4] "RPPA_CHIERARCHICAL"    "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL"
[7] "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 

Input Data has 8 rows and 322 columns.

Variable 1:'CN_CNMF':	nDistinctValues=7,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=8,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'RPPA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'RPPA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"               "METHLYATION_CNMF"      "RPPA_CNMF"            
[4] "RPPA_CHIERARCHICAL"    "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL"
[7] "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 322 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=7, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=8, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1q21.2) mutation analysis
D1V1, multiclass
D1V2, multiclass
D1V3, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          18                            61
  CLUS_2                          22                            60
  CLUS_3                          12                            33
D1V4, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          32                            78
  CLUS_2                          16                            64
  CLUS_3                           4                            12
D1V5, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          41                            77
  CLUS_2                          16                            75
  CLUS_3                          12                            78
D1V6, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          16                            79
  CLUS_2                          13                            71
  CLUS_3                          40                            80
D1V7, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          11                            90
  CLUS_2                          44                            83
  CLUS_3                          21                            72
D1V8, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          48                           133
  CLUS_2                          25                           105
  CLUS_3                           3                             7

Clustering(2) Variable = Amp Peak  2(2q11.2) mutation analysis
D2V1, multiclass
D2V2, multiclass
D2V3, multiclass
        clus
vv       AMP PEAK  2(2Q11.2) MUTATED AMP PEAK  2(2Q11.2) WILD-TYPE
  CLUS_1                          19                            60
  CLUS_2                          21                            61
  CLUS_3                          10                            35
D2V4, multiclass
        clus
vv       AMP PEAK  2(2Q11.2) MUTATED AMP PEAK  2(2Q11.2) WILD-TYPE
  CLUS_1                          25                            85
  CLUS_2                          18                            62
  CLUS_3                           7                             9
D2V5, multiclass
        clus
vv       AMP PEAK  2(2Q11.2) MUTATED AMP PEAK  2(2Q11.2) WILD-TYPE
  CLUS_1                          36                            82
  CLUS_2                          19                            72
  CLUS_3                          12                            78
D2V6, multiclass
        clus
vv       AMP PEAK  2(2Q11.2) MUTATED AMP PEAK  2(2Q11.2) WILD-TYPE
  CLUS_1                          17                            78
  CLUS_2                          15                            69
  CLUS_3                          35                            85
D2V7, multiclass
        clus
vv       AMP PEAK  2(2Q11.2) MUTATED AMP PEAK  2(2Q11.2) WILD-TYPE
  CLUS_1                          16                            85
  CLUS_2                          36                            91
  CLUS_3                          16                            77
D2V8, multiclass
        clus
vv       AMP PEAK  2(2Q11.2) MUTATED AMP PEAK  2(2Q11.2) WILD-TYPE
  CLUS_1                          43                           138
  CLUS_2                          24                           106
  CLUS_3                           1                             9

Clustering(3) Variable = Amp Peak  3(2q31.2) mutation analysis
D3V1, multiclass
D3V2, multiclass
D3V3, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          17                            62
  CLUS_2                          27                            55
  CLUS_3                           8                            37
D3V4, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          32                            78
  CLUS_2                          16                            64
  CLUS_3                           4                            12
D3V5, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          30                            88
  CLUS_2                          20                            71
  CLUS_3                          15                            75
D3V6, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          19                            76
  CLUS_2                          13                            71
  CLUS_3                          33                            87
D3V7, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          16                            85
  CLUS_2                          29                            98
  CLUS_3                          21                            72
D3V8, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          36                           145
  CLUS_2                          25                           105
  CLUS_3                           5                             5

Clustering(4) Variable = Amp Peak  4(2q32.2) mutation analysis
D4V1, multiclass
D4V2, multiclass
D4V3, multiclass
        clus
vv       AMP PEAK  4(2Q32.2) MUTATED AMP PEAK  4(2Q32.2) WILD-TYPE
  CLUS_1                          14                            65
  CLUS_2                          25                            57
  CLUS_3                           6                            39
D4V4, multiclass
        clus
vv       AMP PEAK  4(2Q32.2) MUTATED AMP PEAK  4(2Q32.2) WILD-TYPE
  CLUS_1                          28                            82
  CLUS_2                          14                            66
  CLUS_3                           3                            13
D4V5, multiclass
        clus
vv       AMP PEAK  4(2Q32.2) MUTATED AMP PEAK  4(2Q32.2) WILD-TYPE
  CLUS_1                          28                            90
  CLUS_2                          16                            75
  CLUS_3                          12                            78
D4V6, multiclass
        clus
vv       AMP PEAK  4(2Q32.2) MUTATED AMP PEAK  4(2Q32.2) WILD-TYPE
  CLUS_1                          16                            79
  CLUS_2                          10                            74
  CLUS_3                          30                            90
D4V7, multiclass
        clus
vv       AMP PEAK  4(2Q32.2) MUTATED AMP PEAK  4(2Q32.2) WILD-TYPE
  CLUS_1                          11                            90
  CLUS_2                          30                            97
  CLUS_3                          17                            76
D4V8, multiclass
        clus
vv       AMP PEAK  4(2Q32.2) MUTATED AMP PEAK  4(2Q32.2) WILD-TYPE
  CLUS_1                          34                           147
  CLUS_2                          20                           110
  CLUS_3                           4                             6

Clustering(5) Variable = Amp Peak  5(3q26.33) mutation analysis
D5V1, multiclass
D5V2, multiclass
D5V3, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           60                             19
  CLUS_2                           63                             19
  CLUS_3                           30                             15
D5V4, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           84                             26
  CLUS_2                           55                             25
  CLUS_3                           14                              2
D5V5, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           98                             20
  CLUS_2                           73                             18
  CLUS_3                           55                             35
D5V6, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           75                             20
  CLUS_2                           50                             34
  CLUS_3                          101                             19
D5V7, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           66                             35
  CLUS_2                          107                             20
  CLUS_3                           68                             25
D5V8, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          135                             46
  CLUS_2                          100                             30
  CLUS_3                            6                              4

Clustering(6) Variable = Amp Peak  6(5p15.33) mutation analysis
D6V1, multiclass
D6V2, multiclass
D6V3, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           35                             44
  CLUS_2                           36                             46
  CLUS_3                           15                             30
D6V4, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           42                             68
  CLUS_2                           36                             44
  CLUS_3                            8                              8
D6V5, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           57                             61
  CLUS_2                           42                             49
  CLUS_3                           38                             52
D6V6, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           42                             53
  CLUS_2                           34                             50
  CLUS_3                           61                             59
D6V7, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           49                             52
  CLUS_2                           58                             69
  CLUS_3                           39                             54
D6V8, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           85                             96
  CLUS_2                           54                             76
  CLUS_3                            7                              3

Clustering(7) Variable = Amp Peak  7(5p12) mutation analysis
D7V1, multiclass
D7V2, multiclass
D7V3, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        28                          51
  CLUS_2                        33                          49
  CLUS_3                        17                          28
D7V4, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        43                          67
  CLUS_2                        30                          50
  CLUS_3                         5                          11
D7V5, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        47                          71
  CLUS_2                        35                          56
  CLUS_3                        33                          57
D7V6, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        33                          62
  CLUS_2                        30                          54
  CLUS_3                        52                          68
D7V7, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        36                          65
  CLUS_2                        48                          79
  CLUS_3                        37                          56
D7V8, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        69                         112
  CLUS_2                        47                          83
  CLUS_3                         5                           5

Clustering(8) Variable = Amp Peak  8(6p12.1) mutation analysis
D8V1, multiclass
D8V2, multiclass
D8V3, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          16                            63
  CLUS_2                          18                            64
  CLUS_3                          10                            35
D8V4, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          23                            87
  CLUS_2                          19                            61
  CLUS_3                           2                            14
D8V5, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          25                            93
  CLUS_2                          19                            72
  CLUS_3                          18                            72
D8V6, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          18                            77
  CLUS_2                          17                            67
  CLUS_3                          27                            93
D8V7, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          22                            79
  CLUS_2                          25                           102
  CLUS_3                          16                            77
D8V8, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          35                           146
  CLUS_2                          25                           105
  CLUS_3                           3                             7

Clustering(9) Variable = Amp Peak  9(6q12) mutation analysis
D9V1, multiclass
D9V2, multiclass
D9V3, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        17                          62
  CLUS_2                        15                          67
  CLUS_3                         9                          36
D9V4, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        20                          90
  CLUS_2                        19                          61
  CLUS_3                         2                          14
D9V5, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        23                          95
  CLUS_2                        18                          73
  CLUS_3                        17                          73
D9V6, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        17                          78
  CLUS_2                        18                          66
  CLUS_3                        23                          97
D9V7, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        21                          80
  CLUS_2                        22                         105
  CLUS_3                        15                          78
D9V8, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        32                         149
  CLUS_2                        24                         106
  CLUS_3                         2                           8

Clustering(10) Variable = Amp Peak 10(7p11.2) mutation analysis
D10V1, multiclass
D10V2, multiclass
D10V3, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          35                            44
  CLUS_2                          39                            43
  CLUS_3                          21                            24
D10V4, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          53                            57
  CLUS_2                          36                            44
  CLUS_3                           6                            10
D10V5, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          46                            72
  CLUS_2                          41                            50
  CLUS_3                          42                            48
D10V6, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          42                            53
  CLUS_2                          37                            47
  CLUS_3                          50                            70
D10V7, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          46                            55
  CLUS_2                          56                            71
  CLUS_3                          34                            59
D10V8, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          77                           104
  CLUS_2                          52                            78
  CLUS_3                           7                             3

Clustering(11) Variable = Amp Peak 11(7q22.1) mutation analysis
D11V1, multiclass
D11V2, multiclass
D11V3, multiclass
        clus
vv       AMP PEAK 11(7Q22.1) MUTATED AMP PEAK 11(7Q22.1) WILD-TYPE
  CLUS_1                          30                            49
  CLUS_2                          33                            49
  CLUS_3                          14                            31
D11V4, multiclass
        clus
vv       AMP PEAK 11(7Q22.1) MUTATED AMP PEAK 11(7Q22.1) WILD-TYPE
  CLUS_1                          41                            69
  CLUS_2                          30                            50
  CLUS_3                           6                            10
D11V5, multiclass
        clus
vv       AMP PEAK 11(7Q22.1) MUTATED AMP PEAK 11(7Q22.1) WILD-TYPE
  CLUS_1                          46                            72
  CLUS_2                          31                            60
  CLUS_3                          25                            65
D11V6, multiclass
        clus
vv       AMP PEAK 11(7Q22.1) MUTATED AMP PEAK 11(7Q22.1) WILD-TYPE
  CLUS_1                          29                            66
  CLUS_2                          26                            58
  CLUS_3                          47                            73
D11V7, multiclass
        clus
vv       AMP PEAK 11(7Q22.1) MUTATED AMP PEAK 11(7Q22.1) WILD-TYPE
  CLUS_1                          33                            68
  CLUS_2                          54                            73
  CLUS_3                          26                            67
D11V8, multiclass
        clus
vv       AMP PEAK 11(7Q22.1) MUTATED AMP PEAK 11(7Q22.1) WILD-TYPE
  CLUS_1                          68                           113
  CLUS_2                          39                            91
  CLUS_3                           6                             4

Clustering(12) Variable = Amp Peak 12(8p11.23) mutation analysis
D12V1, multiclass
D12V2, multiclass
D12V3, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           25                             54
  CLUS_2                           26                             56
  CLUS_3                           11                             34
D12V4, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           33                             77
  CLUS_2                           22                             58
  CLUS_3                            7                              9
D12V5, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           46                             72
  CLUS_2                           24                             67
  CLUS_3                           28                             62
D12V6, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           21                             74
  CLUS_2                           29                             55
  CLUS_3                           48                             72
D12V7, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           24                             77
  CLUS_2                           52                             75
  CLUS_3                           25                             68
D12V8, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           67                            114
  CLUS_2                           29                            101
  CLUS_3                            5                              5

Clustering(13) Variable = Amp Peak 13(8q11.21) mutation analysis
D13V1, multiclass
D13V2, multiclass
D13V3, multiclass
        clus
vv       AMP PEAK 13(8Q11.21) MUTATED AMP PEAK 13(8Q11.21) WILD-TYPE
  CLUS_1                           44                             35
  CLUS_2                           47                             35
  CLUS_3                           27                             18
D13V4, multiclass
        clus
vv       AMP PEAK 13(8Q11.21) MUTATED AMP PEAK 13(8Q11.21) WILD-TYPE
  CLUS_1                           65                             45
  CLUS_2                           45                             35
  CLUS_3                            8                              8
D13V5, multiclass
        clus
vv       AMP PEAK 13(8Q11.21) MUTATED AMP PEAK 13(8Q11.21) WILD-TYPE
  CLUS_1                           53                             65
  CLUS_2                           63                             28
  CLUS_3                           56                             34
D13V6, multiclass
        clus
vv       AMP PEAK 13(8Q11.21) MUTATED AMP PEAK 13(8Q11.21) WILD-TYPE
  CLUS_1                           67                             28
  CLUS_2                           51                             33
  CLUS_3                           54                             66
D13V7, multiclass
        clus
vv       AMP PEAK 13(8Q11.21) MUTATED AMP PEAK 13(8Q11.21) WILD-TYPE
  CLUS_1                           61                             40
  CLUS_2                           65                             62
  CLUS_3                           62                             31
D13V8, multiclass
        clus
vv       AMP PEAK 13(8Q11.21) MUTATED AMP PEAK 13(8Q11.21) WILD-TYPE
  CLUS_1                           91                             90
  CLUS_2                           90                             40
  CLUS_3                            7                              3

Clustering(14) Variable = Amp Peak 14(8q24.21) mutation analysis
D14V1, multiclass
D14V2, multiclass
D14V3, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           52                             27
  CLUS_2                           63                             19
  CLUS_3                           35                             10
D14V4, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           83                             27
  CLUS_2                           55                             25
  CLUS_3                           12                              4
D14V5, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           69                             49
  CLUS_2                           77                             14
  CLUS_3                           68                             22
D14V6, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           79                             16
  CLUS_2                           65                             19
  CLUS_3                           70                             50
D14V7, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           75                             26
  CLUS_2                           82                             45
  CLUS_3                           74                             19
D14V8, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                          114                             67
  CLUS_2                          109                             21
  CLUS_3                            8                              2

Clustering(15) Variable = Amp Peak 15(9p23) mutation analysis
D15V1, multiclass
D15V2, multiclass
D15V3, multiclass
        clus
vv       AMP PEAK 15(9P23) MUTATED AMP PEAK 15(9P23) WILD-TYPE
  CLUS_1                        21                          58
  CLUS_2                        21                          61
  CLUS_3                        12                          33
D15V4, multiclass
        clus
vv       AMP PEAK 15(9P23) MUTATED AMP PEAK 15(9P23) WILD-TYPE
  CLUS_1                        26                          84
  CLUS_2                        24                          56
  CLUS_3                         4                          12
D15V5, multiclass
        clus
vv       AMP PEAK 15(9P23) MUTATED AMP PEAK 15(9P23) WILD-TYPE
  CLUS_1                        20                          98
  CLUS_2                        25                          66
  CLUS_3                        25                          65
D15V6, multiclass
        clus
vv       AMP PEAK 15(9P23) MUTATED AMP PEAK 15(9P23) WILD-TYPE
  CLUS_1                        25                          70
  CLUS_2                        23                          61
  CLUS_3                        22                          98
D15V7, multiclass
        clus
vv       AMP PEAK 15(9P23) MUTATED AMP PEAK 15(9P23) WILD-TYPE
  CLUS_1                        28                          73
  CLUS_2                        26                         101
  CLUS_3                        21                          72
D15V8, multiclass
        clus
vv       AMP PEAK 15(9P23) MUTATED AMP PEAK 15(9P23) WILD-TYPE
  CLUS_1                        43                         138
  CLUS_2                        31                          99
  CLUS_3                         1                           9

Clustering(16) Variable = Amp Peak 16(9p13.3) mutation analysis
D16V1, multiclass
D16V2, multiclass
D16V3, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          27                            52
  CLUS_2                          22                            60
  CLUS_3                          14                            31
D16V4, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          28                            82
  CLUS_2                          28                            52
  CLUS_3                           7                             9
D16V5, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          21                            97
  CLUS_2                          31                            60
  CLUS_3                          31                            59
D16V6, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          33                            62
  CLUS_2                          26                            58
  CLUS_3                          24                            96
D16V7, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          33                            68
  CLUS_2                          27                           100
  CLUS_3                          29                            64
D16V8, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          41                           140
  CLUS_2                          45                            85
  CLUS_3                           3                             7

Clustering(17) Variable = Amp Peak 17(11p13) mutation analysis
D17V1, multiclass
D17V2, multiclass
D17V3, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         21                           58
  CLUS_2                         14                           68
  CLUS_3                          9                           36
D17V4, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         16                           94
  CLUS_2                         23                           57
  CLUS_3                          5                           11
D17V5, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         20                           98
  CLUS_2                         18                           73
  CLUS_3                         20                           70
D17V6, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         22                           73
  CLUS_2                         19                           65
  CLUS_3                         17                          103
D17V7, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         22                           79
  CLUS_2                         22                          105
  CLUS_3                         18                           75
D17V8, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         34                          147
  CLUS_2                         26                          104
  CLUS_3                          2                            8

Clustering(18) Variable = Amp Peak 18(11p11.2) mutation analysis
D18V1, multiclass
D18V2, multiclass
D18V3, multiclass
        clus
vv       AMP PEAK 18(11P11.2) MUTATED AMP PEAK 18(11P11.2) WILD-TYPE
  CLUS_1                           20                             59
  CLUS_2                           12                             70
  CLUS_3                            7                             38
D18V4, multiclass
        clus
vv       AMP PEAK 18(11P11.2) MUTATED AMP PEAK 18(11P11.2) WILD-TYPE
  CLUS_1                           17                             93
  CLUS_2                           19                             61
  CLUS_3                            3                             13
D18V5, multiclass
        clus
vv       AMP PEAK 18(11P11.2) MUTATED AMP PEAK 18(11P11.2) WILD-TYPE
  CLUS_1                           22                             96
  CLUS_2                           15                             76
  CLUS_3                           20                             70
D18V6, multiclass
        clus
vv       AMP PEAK 18(11P11.2) MUTATED AMP PEAK 18(11P11.2) WILD-TYPE
  CLUS_1                           19                             76
  CLUS_2                           21                             63
  CLUS_3                           17                            103
D18V7, multiclass
        clus
vv       AMP PEAK 18(11P11.2) MUTATED AMP PEAK 18(11P11.2) WILD-TYPE
  CLUS_1                           21                             80
  CLUS_2                           26                            101
  CLUS_3                           15                             78
D18V8, multiclass
        clus
vv       AMP PEAK 18(11P11.2) MUTATED AMP PEAK 18(11P11.2) WILD-TYPE
  CLUS_1                           37                            144
  CLUS_2                           25                            105
  CLUS_3                            0                             10

Clustering(19) Variable = Amp Peak 19(11q13.3) mutation analysis
D19V1, multiclass
D19V2, multiclass
D19V3, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           37                             42
  CLUS_2                           40                             42
  CLUS_3                           20                             25
D19V4, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           46                             64
  CLUS_2                           42                             38
  CLUS_3                            9                              7
D19V5, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           53                             65
  CLUS_2                           47                             44
  CLUS_3                           37                             53
D19V6, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           46                             49
  CLUS_2                           41                             43
  CLUS_3                           50                             70
D19V7, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           43                             58
  CLUS_2                           57                             70
  CLUS_3                           45                             48
D19V8, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           79                            102
  CLUS_2                           61                             69
  CLUS_3                            5                              5

Clustering(20) Variable = Amp Peak 20(12p13.33) mutation analysis
D20V1, multiclass
D20V2, multiclass
D20V3, multiclass
        clus
vv       AMP PEAK 20(12P13.33) MUTATED AMP PEAK 20(12P13.33) WILD-TYPE
  CLUS_1                            35                              44
  CLUS_2                            29                              53
  CLUS_3                            11                              34
D20V4, multiclass
        clus
vv       AMP PEAK 20(12P13.33) MUTATED AMP PEAK 20(12P13.33) WILD-TYPE
  CLUS_1                            37                              73
  CLUS_2                            30                              50
  CLUS_3                             8                               8
D20V5, multiclass
        clus
vv       AMP PEAK 20(12P13.33) MUTATED AMP PEAK 20(12P13.33) WILD-TYPE
  CLUS_1                            49                              69
  CLUS_2                            38                              53
  CLUS_3                            21                              69
D20V6, multiclass
        clus
vv       AMP PEAK 20(12P13.33) MUTATED AMP PEAK 20(12P13.33) WILD-TYPE
  CLUS_1                            38                              57
  CLUS_2                            17                              67
  CLUS_3                            53                              67
D20V7, multiclass
        clus
vv       AMP PEAK 20(12P13.33) MUTATED AMP PEAK 20(12P13.33) WILD-TYPE
  CLUS_1                            24                              77
  CLUS_2                            57                              70
  CLUS_3                            28                              65
D20V8, multiclass
        clus
vv       AMP PEAK 20(12P13.33) MUTATED AMP PEAK 20(12P13.33) WILD-TYPE
  CLUS_1                            63                             118
  CLUS_2                            42                              88
  CLUS_3                             4                               6

Clustering(21) Variable = Amp Peak 21(12q15) mutation analysis
D21V1, multiclass
D21V2, multiclass
D21V3, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         19                           60
  CLUS_2                         21                           61
  CLUS_3                          7                           38
D21V4, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         25                           85
  CLUS_2                         15                           65
  CLUS_3                          7                            9
D21V5, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         29                           89
  CLUS_2                         22                           69
  CLUS_3                         12                           78
D21V6, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         19                           76
  CLUS_2                         11                           73
  CLUS_3                         33                           87
D21V7, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         16                           85
  CLUS_2                         28                           99
  CLUS_3                         19                           74
D21V8, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         35                          146
  CLUS_2                         25                          105
  CLUS_3                          3                            7

Clustering(22) Variable = Amp Peak 22(13q22.1) mutation analysis
D22V1, multiclass
D22V2, multiclass
D22V3, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           23                             56
  CLUS_2                           21                             61
  CLUS_3                            3                             42
D22V4, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           23                             87
  CLUS_2                           18                             62
  CLUS_3                            6                             10
D22V5, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           20                             98
  CLUS_2                           24                             67
  CLUS_3                           21                             69
D22V6, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           28                             67
  CLUS_2                           15                             69
  CLUS_3                           22                             98
D22V7, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           19                             82
  CLUS_2                           25                            102
  CLUS_3                           23                             70
D22V8, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           33                            148
  CLUS_2                           32                             98
  CLUS_3                            2                              8

Clustering(23) Variable = Amp Peak 23(14q11.2) mutation analysis
D23V1, multiclass
D23V2, multiclass
D23V3, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           26                             53
  CLUS_2                           22                             60
  CLUS_3                           15                             30
D23V4, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           33                             77
  CLUS_2                           26                             54
  CLUS_3                            4                             12
D23V5, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           26                             92
  CLUS_2                           34                             57
  CLUS_3                           26                             64
D23V6, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           32                             63
  CLUS_2                           24                             60
  CLUS_3                           30                             90
D23V7, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           31                             70
  CLUS_2                           23                            104
  CLUS_3                           34                             59
D23V8, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           42                            139
  CLUS_2                           42                             88
  CLUS_3                            4                              6

Clustering(24) Variable = Amp Peak 24(15q26.3) mutation analysis
D24V1, multiclass
D24V2, multiclass
D24V3, multiclass
        clus
vv       AMP PEAK 24(15Q26.3) MUTATED AMP PEAK 24(15Q26.3) WILD-TYPE
  CLUS_1                           18                             61
  CLUS_2                           20                             62
  CLUS_3                            7                             38
D24V4, multiclass
        clus
vv       AMP PEAK 24(15Q26.3) MUTATED AMP PEAK 24(15Q26.3) WILD-TYPE
  CLUS_1                           24                             86
  CLUS_2                           17                             63
  CLUS_3                            4                             12
D24V5, multiclass
        clus
vv       AMP PEAK 24(15Q26.3) MUTATED AMP PEAK 24(15Q26.3) WILD-TYPE
  CLUS_1                           25                             93
  CLUS_2                           20                             71
  CLUS_3                           21                             69
D24V6, multiclass
        clus
vv       AMP PEAK 24(15Q26.3) MUTATED AMP PEAK 24(15Q26.3) WILD-TYPE
  CLUS_1                           17                             78
  CLUS_2                           22                             62
  CLUS_3                           27                             93
D24V7, multiclass
        clus
vv       AMP PEAK 24(15Q26.3) MUTATED AMP PEAK 24(15Q26.3) WILD-TYPE
  CLUS_1                           24                             77
  CLUS_2                           30                             97
  CLUS_3                           16                             77
D24V8, multiclass
        clus
vv       AMP PEAK 24(15Q26.3) MUTATED AMP PEAK 24(15Q26.3) WILD-TYPE
  CLUS_1                           41                            140
  CLUS_2                           25                            105
  CLUS_3                            4                              6

Clustering(25) Variable = Amp Peak 25(17q12) mutation analysis
D25V1, multiclass
D25V2, multiclass
D25V3, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         14                           65
  CLUS_2                         15                           67
  CLUS_3                          7                           38
D25V4, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         20                           90
  CLUS_2                         14                           66
  CLUS_3                          2                           14
D25V5, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         29                           89
  CLUS_2                         13                           78
  CLUS_3                          9                           81
D25V6, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         11                           84
  CLUS_2                         11                           73
  CLUS_3                         29                           91
D25V7, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         15                           86
  CLUS_2                         31                           96
  CLUS_3                         10                           83
D25V8, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         33                          148
  CLUS_2                         20                          110
  CLUS_3                          3                            7

Clustering(26) Variable = Amp Peak 26(18p11.31) mutation analysis
D26V1, multiclass
D26V2, multiclass
D26V3, multiclass
        clus
vv       AMP PEAK 26(18P11.31) MUTATED AMP PEAK 26(18P11.31) WILD-TYPE
  CLUS_1                            25                              54
  CLUS_2                            24                              58
  CLUS_3                            15                              30
D26V4, multiclass
        clus
vv       AMP PEAK 26(18P11.31) MUTATED AMP PEAK 26(18P11.31) WILD-TYPE
  CLUS_1                            35                              75
  CLUS_2                            23                              57
  CLUS_3                             6                              10
D26V5, multiclass
        clus
vv       AMP PEAK 26(18P11.31) MUTATED AMP PEAK 26(18P11.31) WILD-TYPE
  CLUS_1                            41                              77
  CLUS_2                            33                              58
  CLUS_3                            23                              67
D26V6, multiclass
        clus
vv       AMP PEAK 26(18P11.31) MUTATED AMP PEAK 26(18P11.31) WILD-TYPE
  CLUS_1                            31                              64
  CLUS_2                            21                              63
  CLUS_3                            45                              75
D26V7, multiclass
        clus
vv       AMP PEAK 26(18P11.31) MUTATED AMP PEAK 26(18P11.31) WILD-TYPE
  CLUS_1                            32                              69
  CLUS_2                            43                              84
  CLUS_3                            27                              66
D26V8, multiclass
        clus
vv       AMP PEAK 26(18P11.31) MUTATED AMP PEAK 26(18P11.31) WILD-TYPE
  CLUS_1                            59                             122
  CLUS_2                            39                              91
  CLUS_3                             4                               6

Clustering(27) Variable = Amp Peak 27(18q11.2) mutation analysis
D27V1, multiclass
D27V2, multiclass
D27V3, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           20                             59
  CLUS_2                           18                             64
  CLUS_3                            7                             38
D27V4, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           21                             89
  CLUS_2                           20                             60
  CLUS_3                            4                             12
D27V5, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           28                             90
  CLUS_2                           21                             70
  CLUS_3                           21                             69
D27V6, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           20                             75
  CLUS_2                           19                             65
  CLUS_3                           31                             89
D27V7, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           19                             82
  CLUS_2                           32                             95
  CLUS_3                           19                             74
D27V8, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           44                            137
  CLUS_2                           25                            105
  CLUS_3                            1                              9

Clustering(28) Variable = Amp Peak 28(20q11.22) mutation analysis
D28V1, multiclass
D28V2, multiclass
D28V3, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            40                              39
  CLUS_2                            35                              47
  CLUS_3                            18                              27
D28V4, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            46                              64
  CLUS_2                            40                              40
  CLUS_3                             7                               9
D28V5, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            49                              69
  CLUS_2                            54                              37
  CLUS_3                            36                              54
D28V6, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            53                              42
  CLUS_2                            34                              50
  CLUS_3                            52                              68
D28V7, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            42                              59
  CLUS_2                            58                              69
  CLUS_3                            44                              49
D28V8, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            72                             109
  CLUS_2                            68                              62
  CLUS_3                             4                               6

Clustering(29) Variable = Amp Peak 29(Xq28) mutation analysis
D29V1, multiclass
D29V2, multiclass
D29V3, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        22                          57
  CLUS_2                        29                          53
  CLUS_3                        15                          30
D29V4, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        35                          75
  CLUS_2                        24                          56
  CLUS_3                         7                           9
D29V5, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        33                          85
  CLUS_2                        34                          57
  CLUS_3                        23                          67
D29V6, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        33                          62
  CLUS_2                        22                          62
  CLUS_3                        35                          85
D29V7, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        25                          76
  CLUS_2                        41                          86
  CLUS_3                        31                          62
D29V8, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        48                         133
  CLUS_2                        45                          85
  CLUS_3                         4                           6

Clustering(30) Variable = Del Peak  1(1p36.13) mutation analysis
D30V1, multiclass
D30V2, multiclass
D30V3, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           16                             63
  CLUS_2                           26                             56
  CLUS_3                            3                             42
D30V4, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           26                             84
  CLUS_2                           16                             64
  CLUS_3                            3                             13
D30V5, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           39                             79
  CLUS_2                           17                             74
  CLUS_3                            7                             83
D30V6, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           16                             79
  CLUS_2                            9                             75
  CLUS_3                           38                             82
D30V7, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           17                             84
  CLUS_2                           37                             90
  CLUS_3                           13                             80
D30V8, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           46                            135
  CLUS_2                           20                            110
  CLUS_3                            1                              9

Clustering(31) Variable = Del Peak  2(1p13.2) mutation analysis
D31V1, multiclass
D31V2, multiclass
D31V3, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          16                            63
  CLUS_2                          34                            48
  CLUS_3                           8                            37
D31V4, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          37                            73
  CLUS_2                          15                            65
  CLUS_3                           6                            10
D31V5, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          40                            78
  CLUS_2                          22                            69
  CLUS_3                          13                            77
D31V6, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          21                            74
  CLUS_2                          16                            68
  CLUS_3                          38                            82
D31V7, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          16                            85
  CLUS_2                          48                            79
  CLUS_3                          17                            76
D31V8, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          47                           134
  CLUS_2                          32                            98
  CLUS_3                           2                             8

Clustering(32) Variable = Del Peak  3(2q21.2) mutation analysis
D32V1, multiclass
D32V2, multiclass
D32V3, multiclass
        clus
vv       DEL PEAK  3(2Q21.2) MUTATED DEL PEAK  3(2Q21.2) WILD-TYPE
  CLUS_1                           9                            70
  CLUS_2                           9                            73
  CLUS_3                           7                            38
D32V4, multiclass
        clus
vv       DEL PEAK  3(2Q21.2) MUTATED DEL PEAK  3(2Q21.2) WILD-TYPE
  CLUS_1                          14                            96
  CLUS_2                           9                            71
  CLUS_3                           2                            14
D32V5, multiclass
        clus
vv       DEL PEAK  3(2Q21.2) MUTATED DEL PEAK  3(2Q21.2) WILD-TYPE
  CLUS_1                          11                           107
  CLUS_2                           7                            84
  CLUS_3                          19                            71
D32V6, multiclass
        clus
vv       DEL PEAK  3(2Q21.2) MUTATED DEL PEAK  3(2Q21.2) WILD-TYPE
  CLUS_1                           8                            87
  CLUS_2                          19                            65
  CLUS_3                          10                           110
D32V7, multiclass
        clus
vv       DEL PEAK  3(2Q21.2) MUTATED DEL PEAK  3(2Q21.2) WILD-TYPE
  CLUS_1                          20                            81
  CLUS_2                          16                           111
  CLUS_3                           4                            89
D32V8, multiclass
        clus
vv       DEL PEAK  3(2Q21.2) MUTATED DEL PEAK  3(2Q21.2) WILD-TYPE
  CLUS_1                          25                           156
  CLUS_2                          12                           118
  CLUS_3                           3                             7

Clustering(33) Variable = Del Peak  4(2q22.1) mutation analysis
D33V1, multiclass
D33V2, multiclass
D33V3, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          16                            63
  CLUS_2                          15                            67
  CLUS_3                          10                            35
D33V4, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          23                            87
  CLUS_2                          13                            67
  CLUS_3                           5                            11
D33V5, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          29                            89
  CLUS_2                          11                            80
  CLUS_3                          21                            69
D33V6, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          11                            84
  CLUS_2                          21                            63
  CLUS_3                          29                            91
D33V7, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          20                            81
  CLUS_2                          33                            94
  CLUS_3                          13                            80
D33V8, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          45                           136
  CLUS_2                          15                           115
  CLUS_3                           6                             4

Clustering(34) Variable = Del Peak  5(2q36.2) mutation analysis
D34V1, multiclass
D34V2, multiclass
D34V3, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          26                            53
  CLUS_2                          27                            55
  CLUS_3                           9                            36
D34V4, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          35                            75
  CLUS_2                          20                            60
  CLUS_3                           7                             9
D34V5, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          51                            67
  CLUS_2                          21                            70
  CLUS_3                          19                            71
D34V6, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          17                            78
  CLUS_2                          25                            59
  CLUS_3                          49                            71
D34V7, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          29                            72
  CLUS_2                          46                            81
  CLUS_3                          20                            73
D34V8, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          64                           117
  CLUS_2                          27                           103
  CLUS_3                           4                             6

Clustering(35) Variable = Del Peak  6(3p24.1) mutation analysis
D35V1, multiclass
D35V2, multiclass
D35V3, multiclass
        clus
vv       DEL PEAK  6(3P24.1) MUTATED DEL PEAK  6(3P24.1) WILD-TYPE
  CLUS_1                          57                            22
  CLUS_2                          68                            14
  CLUS_3                          32                            13
D35V4, multiclass
        clus
vv       DEL PEAK  6(3P24.1) MUTATED DEL PEAK  6(3P24.1) WILD-TYPE
  CLUS_1                          83                            27
  CLUS_2                          59                            21
  CLUS_3                          15                             1
D35V5, multiclass
        clus
vv       DEL PEAK  6(3P24.1) MUTATED DEL PEAK  6(3P24.1) WILD-TYPE
  CLUS_1                          84                            34
  CLUS_2                          76                            15
  CLUS_3                          64                            26
D35V6, multiclass
        clus
vv       DEL PEAK  6(3P24.1) MUTATED DEL PEAK  6(3P24.1) WILD-TYPE
  CLUS_1                          76                            19
  CLUS_2                          60                            24
  CLUS_3                          88                            32
D35V7, multiclass
        clus
vv       DEL PEAK  6(3P24.1) MUTATED DEL PEAK  6(3P24.1) WILD-TYPE
  CLUS_1                          70                            31
  CLUS_2                          96                            31
  CLUS_3                          72                            21
D35V8, multiclass
        clus
vv       DEL PEAK  6(3P24.1) MUTATED DEL PEAK  6(3P24.1) WILD-TYPE
  CLUS_1                         131                            50
  CLUS_2                         102                            28
  CLUS_3                           5                             5

Clustering(36) Variable = Del Peak  7(3p14.2) mutation analysis
D36V1, multiclass
D36V2, multiclass
D36V3, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          58                            21
  CLUS_2                          69                            13
  CLUS_3                          32                            13
D36V4, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          85                            25
  CLUS_2                          60                            20
  CLUS_3                          14                             2
D36V5, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          88                            30
  CLUS_2                          76                            15
  CLUS_3                          64                            26
D36V6, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          77                            18
  CLUS_2                          58                            26
  CLUS_3                          93                            27
D36V7, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          74                            27
  CLUS_2                          96                            31
  CLUS_3                          71                            22
D36V8, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                         134                            47
  CLUS_2                         102                            28
  CLUS_3                           5                             5

Clustering(37) Variable = Del Peak  8(3p12.2) mutation analysis
D37V1, multiclass
D37V2, multiclass
D37V3, multiclass
        clus
vv       DEL PEAK  8(3P12.2) MUTATED DEL PEAK  8(3P12.2) WILD-TYPE
  CLUS_1                          57                            22
  CLUS_2                          62                            20
  CLUS_3                          32                            13
D37V4, multiclass
        clus
vv       DEL PEAK  8(3P12.2) MUTATED DEL PEAK  8(3P12.2) WILD-TYPE
  CLUS_1                          79                            31
  CLUS_2                          59                            21
  CLUS_3                          13                             3
D37V5, multiclass
        clus
vv       DEL PEAK  8(3P12.2) MUTATED DEL PEAK  8(3P12.2) WILD-TYPE
  CLUS_1                          85                            33
  CLUS_2                          70                            21
  CLUS_3                          59                            31
D37V6, multiclass
        clus
vv       DEL PEAK  8(3P12.2) MUTATED DEL PEAK  8(3P12.2) WILD-TYPE
  CLUS_1                          71                            24
  CLUS_2                          56                            28
  CLUS_3                          87                            33
D37V7, multiclass
        clus
vv       DEL PEAK  8(3P12.2) MUTATED DEL PEAK  8(3P12.2) WILD-TYPE
  CLUS_1                          68                            33
  CLUS_2                          94                            33
  CLUS_3                          65                            28
D37V8, multiclass
        clus
vv       DEL PEAK  8(3P12.2) MUTATED DEL PEAK  8(3P12.2) WILD-TYPE
  CLUS_1                         129                            52
  CLUS_2                          94                            36
  CLUS_3                           4                             6

Clustering(38) Variable = Del Peak  9(4p16.3) mutation analysis
D38V1, multiclass
D38V2, multiclass
D38V3, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          42                            37
  CLUS_2                          37                            45
  CLUS_3                          12                            33
D38V4, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          46                            64
  CLUS_2                          37                            43
  CLUS_3                           8                             8
D38V5, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          57                            61
  CLUS_2                          38                            53
  CLUS_3                          34                            56
D38V6, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          40                            55
  CLUS_2                          30                            54
  CLUS_3                          59                            61
D38V7, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          38                            63
  CLUS_2                          63                            64
  CLUS_3                          35                            58
D38V8, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          80                           101
  CLUS_2                          51                            79
  CLUS_3                           5                             5

Clustering(39) Variable = Del Peak 10(4p15.2) mutation analysis
D39V1, multiclass
D39V2, multiclass
D39V3, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          41                            38
  CLUS_2                          38                            44
  CLUS_3                          12                            33
D39V4, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          46                            64
  CLUS_2                          35                            45
  CLUS_3                          10                             6
D39V5, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          60                            58
  CLUS_2                          39                            52
  CLUS_3                          30                            60
D39V6, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          41                            54
  CLUS_2                          26                            58
  CLUS_3                          62                            58
D39V7, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          35                            66
  CLUS_2                          66                            61
  CLUS_3                          36                            57
D39V8, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          81                           100
  CLUS_2                          52                            78
  CLUS_3                           4                             6

Clustering(40) Variable = Del Peak 11(4q22.1) mutation analysis
D40V1, multiclass
D40V2, multiclass
D40V3, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          27                            52
  CLUS_2                          36                            46
  CLUS_3                           9                            36
D40V4, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          38                            72
  CLUS_2                          27                            53
  CLUS_3                           7                             9
D40V5, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          42                            76
  CLUS_2                          31                            60
  CLUS_3                          24                            66
D40V6, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          32                            63
  CLUS_2                          21                            63
  CLUS_3                          44                            76
D40V7, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          27                            74
  CLUS_2                          46                            81
  CLUS_3                          28                            65
D40V8, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          58                           123
  CLUS_2                          39                            91
  CLUS_3                           4                             6

Clustering(41) Variable = Del Peak 12(4q35.2) mutation analysis
D41V1, multiclass
D41V2, multiclass
D41V3, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          36                            43
  CLUS_2                          45                            37
  CLUS_3                          11                            34
D41V4, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          47                            63
  CLUS_2                          36                            44
  CLUS_3                           9                             7
D41V5, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          49                            69
  CLUS_2                          42                            49
  CLUS_3                          31                            59
D41V6, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          44                            51
  CLUS_2                          30                            54
  CLUS_3                          48                            72
D41V7, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          35                            66
  CLUS_2                          57                            70
  CLUS_3                          38                            55
D41V8, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          68                           113
  CLUS_2                          59                            71
  CLUS_3                           3                             7

Clustering(42) Variable = Del Peak 13(5q11.2) mutation analysis
D42V1, multiclass
D42V2, multiclass
D42V3, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          32                            47
  CLUS_2                          44                            38
  CLUS_3                          16                            29
D42V4, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          47                            63
  CLUS_2                          37                            43
  CLUS_3                           8                             8
D42V5, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          55                            63
  CLUS_2                          45                            46
  CLUS_3                          29                            61
D42V6, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          45                            50
  CLUS_2                          22                            62
  CLUS_3                          62                            58
D42V7, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          33                            68
  CLUS_2                          60                            67
  CLUS_3                          40                            53
D42V8, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          71                           110
  CLUS_2                          56                            74
  CLUS_3                           6                             4

Clustering(43) Variable = Del Peak 14(5q35.3) mutation analysis
D43V1, multiclass
D43V2, multiclass
D43V3, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          28                            51
  CLUS_2                          39                            43
  CLUS_3                          16                            29
D43V4, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          42                            68
  CLUS_2                          31                            49
  CLUS_3                          10                             6
D43V5, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          55                            63
  CLUS_2                          40                            51
  CLUS_3                          25                            65
D43V6, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          39                            56
  CLUS_2                          20                            64
  CLUS_3                          61                            59
D43V7, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          32                            69
  CLUS_2                          57                            70
  CLUS_3                          37                            56
D43V8, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          68                           113
  CLUS_2                          53                            77
  CLUS_3                           5                             5

Clustering(44) Variable = Del Peak 15(6p25.3) mutation analysis
D44V1, multiclass
D44V2, multiclass
D44V3, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          18                            61
  CLUS_2                          23                            59
  CLUS_3                           4                            41
D44V4, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          24                            86
  CLUS_2                          14                            66
  CLUS_3                           7                             9
D44V5, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          29                            89
  CLUS_2                          24                            67
  CLUS_3                           9                            81
D44V6, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          21                            74
  CLUS_2                          13                            71
  CLUS_3                          28                            92
D44V7, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          10                            91
  CLUS_2                          33                            94
  CLUS_3                          21                            72
D44V8, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          35                           146
  CLUS_2                          26                           104
  CLUS_3                           3                             7

Clustering(45) Variable = Del Peak 16(7q31.1) mutation analysis
D45V1, multiclass
D45V2, multiclass
D45V3, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          16                            63
  CLUS_2                          12                            70
  CLUS_3                           6                            39
D45V4, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          16                            94
  CLUS_2                          16                            64
  CLUS_3                           2                            14
D45V5, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          15                           103
  CLUS_2                          15                            76
  CLUS_3                          18                            72
D45V6, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          13                            82
  CLUS_2                          16                            68
  CLUS_3                          19                           101
D45V7, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          19                            82
  CLUS_2                          21                           106
  CLUS_3                           9                            84
D45V8, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          29                           152
  CLUS_2                          17                           113
  CLUS_3                           3                             7

Clustering(46) Variable = Del Peak 17(7q36.1) mutation analysis
D46V1, multiclass
D46V2, multiclass
D46V3, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          25                            54
  CLUS_2                          23                            59
  CLUS_3                           8                            37
D46V4, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          26                            84
  CLUS_2                          24                            56
  CLUS_3                           6                            10
D46V5, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          31                            87
  CLUS_2                          24                            67
  CLUS_3                          22                            68
D46V6, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          22                            73
  CLUS_2                          21                            63
  CLUS_3                          34                            86
D46V7, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          28                            73
  CLUS_2                          34                            93
  CLUS_3                          18                            75
D46V8, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          47                           134
  CLUS_2                          27                           103
  CLUS_3                           6                             4

Clustering(47) Variable = Del Peak 18(8p23.2) mutation analysis
D47V1, multiclass
D47V2, multiclass
D47V3, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          50                            29
  CLUS_2                          50                            32
  CLUS_3                          24                            21
D47V4, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          61                            49
  CLUS_2                          54                            26
  CLUS_3                           9                             7
D47V5, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          56                            62
  CLUS_2                          61                            30
  CLUS_3                          53                            37
D47V6, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          66                            29
  CLUS_2                          48                            36
  CLUS_3                          56                            64
D47V7, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          63                            38
  CLUS_2                          62                            65
  CLUS_3                          58                            35
D47V8, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          89                            92
  CLUS_2                          88                            42
  CLUS_3                           6                             4

Clustering(48) Variable = Del Peak 19(9p23) mutation analysis
D48V1, multiclass
D48V2, multiclass
D48V3, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        34                          45
  CLUS_2                        46                          36
  CLUS_3                        19                          26
D48V4, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        55                          55
  CLUS_2                        37                          43
  CLUS_3                         7                           9
D48V5, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        59                          59
  CLUS_2                        41                          50
  CLUS_3                        41                          49
D48V6, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        40                          55
  CLUS_2                        42                          42
  CLUS_3                        59                          61
D48V7, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        50                          51
  CLUS_2                        60                          67
  CLUS_3                        40                          53
D48V8, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        87                          94
  CLUS_2                        56                          74
  CLUS_3                         7                           3

Clustering(49) Variable = Del Peak 20(9p21.3) mutation analysis
D49V1, multiclass
D49V2, multiclass
D49V3, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          46                            33
  CLUS_2                          56                            26
  CLUS_3                          28                            17
D49V4, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          68                            42
  CLUS_2                          50                            30
  CLUS_3                          12                             4
D49V5, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          64                            54
  CLUS_2                          58                            33
  CLUS_3                          53                            37
D49V6, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          59                            36
  CLUS_2                          51                            33
  CLUS_3                          65                            55
D49V7, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          59                            42
  CLUS_2                          74                            53
  CLUS_3                          56                            37
D49V8, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                         103                            78
  CLUS_2                          79                            51
  CLUS_3                           7                             3

Clustering(50) Variable = Del Peak 21(9q21.11) mutation analysis
D50V1, multiclass
D50V2, multiclass
D50V3, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           12                             67
  CLUS_2                           16                             66
  CLUS_3                           10                             35
D50V4, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           22                             88
  CLUS_2                           14                             66
  CLUS_3                            2                             14
D50V5, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           24                             94
  CLUS_2                           16                             75
  CLUS_3                           17                             73
D50V6, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           16                             79
  CLUS_2                           15                             69
  CLUS_3                           26                             94
D50V7, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           21                             80
  CLUS_2                           24                            103
  CLUS_3                           16                             77
D50V8, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           37                            144
  CLUS_2                           19                            111
  CLUS_3                            5                              5

Clustering(51) Variable = Del Peak 22(9q34.3) mutation analysis
D51V1, multiclass
D51V2, multiclass
D51V3, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                           9                            70
  CLUS_2                          16                            66
  CLUS_3                           7                            38
D51V4, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                          21                            89
  CLUS_2                          11                            69
  CLUS_3                           0                            16
D51V5, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                          20                            98
  CLUS_2                          16                            75
  CLUS_3                          13                            77
D51V6, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                          18                            77
  CLUS_2                          10                            74
  CLUS_3                          21                            99
D51V7, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                          13                            88
  CLUS_2                          24                           103
  CLUS_3                          16                            77
D51V8, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                          32                           149
  CLUS_2                          18                           112
  CLUS_3                           3                             7

Clustering(52) Variable = Del Peak 23(10p15.3) mutation analysis
D52V1, multiclass
D52V2, multiclass
D52V3, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           29                             50
  CLUS_2                           28                             54
  CLUS_3                           15                             30
D52V4, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           33                             77
  CLUS_2                           34                             46
  CLUS_3                            5                             11
D52V5, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           35                             83
  CLUS_2                           36                             55
  CLUS_3                           31                             59
D52V6, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           38                             57
  CLUS_2                           28                             56
  CLUS_3                           36                             84
D52V7, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           33                             68
  CLUS_2                           40                             87
  CLUS_3                           35                             58
D52V8, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           58                            123
  CLUS_2                           48                             82
  CLUS_3                            2                              8

Clustering(53) Variable = Del Peak 24(10p11.21) mutation analysis
D53V1, multiclass
D53V2, multiclass
D53V3, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            30                              49
  CLUS_2                            25                              57
  CLUS_3                            14                              31
D53V4, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            31                              79
  CLUS_2                            34                              46
  CLUS_3                             4                              12
D53V5, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            37                              81
  CLUS_2                            33                              58
  CLUS_3                            28                              62
D53V6, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            32                              63
  CLUS_2                            27                              57
  CLUS_3                            39                              81
D53V7, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            32                              69
  CLUS_2                            41                              86
  CLUS_3                            28                              65
D53V8, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            60                             121
  CLUS_2                            39                              91
  CLUS_3                             2                               8

Clustering(54) Variable = Del Peak 25(10q23.31) mutation analysis
D54V1, multiclass
D54V2, multiclass
D54V3, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            22                              57
  CLUS_2                            24                              58
  CLUS_3                            11                              34
D54V4, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            30                              80
  CLUS_2                            24                              56
  CLUS_3                             3                              13
D54V5, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            39                              79
  CLUS_2                            26                              65
  CLUS_3                            15                              75
D54V6, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            24                              71
  CLUS_2                            14                              70
  CLUS_3                            42                              78
D54V7, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            22                              79
  CLUS_2                            39                              88
  CLUS_3                            22                              71
D54V8, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            49                             132
  CLUS_2                            31                              99
  CLUS_3                             3                               7

Clustering(55) Variable = Del Peak 26(11p15.4) mutation analysis
D55V1, multiclass
D55V2, multiclass
D55V3, multiclass
        clus
vv       DEL PEAK 26(11P15.4) MUTATED DEL PEAK 26(11P15.4) WILD-TYPE
  CLUS_1                           25                             54
  CLUS_2                           31                             51
  CLUS_3                           12                             33
D55V4, multiclass
        clus
vv       DEL PEAK 26(11P15.4) MUTATED DEL PEAK 26(11P15.4) WILD-TYPE
  CLUS_1                           34                             76
  CLUS_2                           27                             53
  CLUS_3                            7                              9
D55V5, multiclass
        clus
vv       DEL PEAK 26(11P15.4) MUTATED DEL PEAK 26(11P15.4) WILD-TYPE
  CLUS_1                           51                             67
  CLUS_2                           26                             65
  CLUS_3                           19                             71
D55V6, multiclass
        clus
vv       DEL PEAK 26(11P15.4) MUTATED DEL PEAK 26(11P15.4) WILD-TYPE
  CLUS_1                           25                             70
  CLUS_2                           20                             64
  CLUS_3                           51                             69
D55V7, multiclass
        clus
vv       DEL PEAK 26(11P15.4) MUTATED DEL PEAK 26(11P15.4) WILD-TYPE
  CLUS_1                           23                             78
  CLUS_2                           54                             73
  CLUS_3                           25                             68
D55V8, multiclass
        clus
vv       DEL PEAK 26(11P15.4) MUTATED DEL PEAK 26(11P15.4) WILD-TYPE
  CLUS_1                           65                            116
  CLUS_2                           34                             96
  CLUS_3                            3                              7

Clustering(56) Variable = Del Peak 27(11q23.1) mutation analysis
D56V1, multiclass
D56V2, multiclass
D56V3, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           40                             39
  CLUS_2                           40                             42
  CLUS_3                           17                             28
D56V4, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           53                             57
  CLUS_2                           39                             41
  CLUS_3                            5                             11
D56V5, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           73                             45
  CLUS_2                           40                             51
  CLUS_3                           33                             57
D56V6, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           37                             58
  CLUS_2                           33                             51
  CLUS_3                           76                             44
D56V7, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           46                             55
  CLUS_2                           68                             59
  CLUS_3                           39                             54
D56V8, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           94                             87
  CLUS_2                           54                             76
  CLUS_3                            5                              5

Clustering(57) Variable = Del Peak 28(12q24.33) mutation analysis
D57V1, multiclass
D57V2, multiclass
D57V3, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            13                              66
  CLUS_2                            14                              68
  CLUS_3                             1                              44
D57V4, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            16                              94
  CLUS_2                             9                              71
  CLUS_3                             3                              13
D57V5, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            16                             102
  CLUS_2                            10                              81
  CLUS_3                            11                              79
D57V6, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            11                              84
  CLUS_2                             9                              75
  CLUS_3                            17                             103
D57V7, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                             9                              92
  CLUS_2                            18                             109
  CLUS_3                            10                              83
D57V8, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            25                             156
  CLUS_2                            10                             120
  CLUS_3                             2                               8

Clustering(58) Variable = Del Peak 29(13q12.11) mutation analysis
D58V1, multiclass
D58V2, multiclass
D58V3, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            36                              43
  CLUS_2                            43                              39
  CLUS_3                            20                              25
D58V4, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            53                              57
  CLUS_2                            36                              44
  CLUS_3                            10                               6
D58V5, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            61                              57
  CLUS_2                            45                              46
  CLUS_3                            32                              58
D58V6, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            45                              50
  CLUS_2                            29                              55
  CLUS_3                            64                              56
D58V7, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            43                              58
  CLUS_2                            61                              66
  CLUS_3                            41                              52
D58V8, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            80                             101
  CLUS_2                            58                              72
  CLUS_3                             7                               3

Clustering(59) Variable = Del Peak 30(13q14.2) mutation analysis
D59V1, multiclass
D59V2, multiclass
D59V3, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           31                             48
  CLUS_2                           37                             45
  CLUS_3                           17                             28
D59V4, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           51                             59
  CLUS_2                           29                             51
  CLUS_3                            5                             11
D59V5, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           66                             52
  CLUS_2                           39                             52
  CLUS_3                           23                             67
D59V6, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           38                             57
  CLUS_2                           22                             62
  CLUS_3                           68                             52
D59V7, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           36                             65
  CLUS_2                           65                             62
  CLUS_3                           36                             57
D59V8, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           82                             99
  CLUS_2                           51                             79
  CLUS_3                            4                              6

Clustering(60) Variable = Del Peak 31(14q11.2) mutation analysis
D60V1, multiclass
D60V2, multiclass
D60V3, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           10                             69
  CLUS_2                            9                             73
  CLUS_3                            8                             37
D60V4, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           11                             99
  CLUS_2                           13                             67
  CLUS_3                            3                             13
D60V5, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           20                             98
  CLUS_2                           10                             81
  CLUS_3                           14                             76
D60V6, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           10                             85
  CLUS_2                           15                             69
  CLUS_3                           19                            101
D60V7, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           17                             84
  CLUS_2                           21                            106
  CLUS_3                            7                             86
D60V8, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           30                            151
  CLUS_2                           12                            118
  CLUS_3                            3                              7

Clustering(61) Variable = Del Peak 32(14q32.32) mutation analysis
D61V1, multiclass
D61V2, multiclass
D61V3, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                            15                              64
  CLUS_2                            11                              71
  CLUS_3                             4                              41
D61V4, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                            18                              92
  CLUS_2                             9                              71
  CLUS_3                             3                              13
D61V5, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                            30                              88
  CLUS_2                            11                              80
  CLUS_3                             5                              85
D61V6, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                            11                              84
  CLUS_2                             4                              80
  CLUS_3                            31                              89
D61V7, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                            11                              90
  CLUS_2                            26                             101
  CLUS_3                            12                              81
D61V8, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                            34                             147
  CLUS_2                            14                             116
  CLUS_3                             1                               9

Clustering(62) Variable = Del Peak 33(15q15.1) mutation analysis
D62V1, multiclass
D62V2, multiclass
D62V3, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           19                             60
  CLUS_2                           28                             54
  CLUS_3                           12                             33
D62V4, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           31                             79
  CLUS_2                           20                             60
  CLUS_3                            8                              8
D62V5, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           30                             88
  CLUS_2                           30                             61
  CLUS_3                           14                             76
D62V6, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           29                             66
  CLUS_2                           13                             71
  CLUS_3                           32                             88
D62V7, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           22                             79
  CLUS_2                           27                            100
  CLUS_3                           27                             66
D62V8, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           38                            143
  CLUS_2                           34                             96
  CLUS_3                            4                              6

Clustering(63) Variable = Del Peak 34(16q12.1) mutation analysis
D63V1, multiclass
D63V2, multiclass
D63V3, multiclass
        clus
vv       DEL PEAK 34(16Q12.1) MUTATED DEL PEAK 34(16Q12.1) WILD-TYPE
  CLUS_1                            9                             70
  CLUS_2                           14                             68
  CLUS_3                            4                             41
D63V4, multiclass
        clus
vv       DEL PEAK 34(16Q12.1) MUTATED DEL PEAK 34(16Q12.1) WILD-TYPE
  CLUS_1                           20                             90
  CLUS_2                            6                             74
  CLUS_3                            1                             15
D63V5, multiclass
        clus
vv       DEL PEAK 34(16Q12.1) MUTATED DEL PEAK 34(16Q12.1) WILD-TYPE
  CLUS_1                           38                             80
  CLUS_2                            9                             82
  CLUS_3                            4                             86
D63V6, multiclass
        clus
vv       DEL PEAK 34(16Q12.1) MUTATED DEL PEAK 34(16Q12.1) WILD-TYPE
  CLUS_1                            7                             88
  CLUS_2                            6                             78
  CLUS_3                           38                             82
D63V7, multiclass
        clus
vv       DEL PEAK 34(16Q12.1) MUTATED DEL PEAK 34(16Q12.1) WILD-TYPE
  CLUS_1                           13                             88
  CLUS_2                           34                             93
  CLUS_3                            7                             86
D63V8, multiclass
        clus
vv       DEL PEAK 34(16Q12.1) MUTATED DEL PEAK 34(16Q12.1) WILD-TYPE
  CLUS_1                           41                            140
  CLUS_2                           12                            118
  CLUS_3                            1                              9

Clustering(64) Variable = Del Peak 35(16q23.3) mutation analysis
D64V1, multiclass
D64V2, multiclass
D64V3, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                           13                             66
  CLUS_2                           22                             60
  CLUS_3                            6                             39
D64V4, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                           29                             81
  CLUS_2                           11                             69
  CLUS_3                            1                             15
D64V5, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                           36                             82
  CLUS_2                           12                             79
  CLUS_3                           10                             80
D64V6, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                           11                             84
  CLUS_2                            9                             75
  CLUS_3                           38                             82
D64V7, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                           18                             83
  CLUS_2                           34                             93
  CLUS_3                           12                             81
D64V8, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                           44                            137
  CLUS_2                           18                            112
  CLUS_3                            2                              8

Clustering(65) Variable = Del Peak 36(17q25.3) mutation analysis
D65V1, multiclass
D65V2, multiclass
D65V3, multiclass
        clus
vv       DEL PEAK 36(17Q25.3) MUTATED DEL PEAK 36(17Q25.3) WILD-TYPE
  CLUS_1                           10                             69
  CLUS_2                            9                             73
  CLUS_3                            1                             44
D65V4, multiclass
        clus
vv       DEL PEAK 36(17Q25.3) MUTATED DEL PEAK 36(17Q25.3) WILD-TYPE
  CLUS_1                           10                            100
  CLUS_2                            9                             71
  CLUS_3                            1                             15
D65V5, multiclass
        clus
vv       DEL PEAK 36(17Q25.3) MUTATED DEL PEAK 36(17Q25.3) WILD-TYPE
  CLUS_1                           23                             95
  CLUS_2                            8                             83
  CLUS_3                            8                             82
D65V6, multiclass
        clus
vv       DEL PEAK 36(17Q25.3) MUTATED DEL PEAK 36(17Q25.3) WILD-TYPE
  CLUS_1                            7                             88
  CLUS_2                           10                             74
  CLUS_3                           22                             98
D65V7, multiclass
        clus
vv       DEL PEAK 36(17Q25.3) MUTATED DEL PEAK 36(17Q25.3) WILD-TYPE
  CLUS_1                            7                             94
  CLUS_2                           25                            102
  CLUS_3                            8                             85
D65V8, multiclass
        clus
vv       DEL PEAK 36(17Q25.3) MUTATED DEL PEAK 36(17Q25.3) WILD-TYPE
  CLUS_1                           30                            151
  CLUS_2                           10                            120
  CLUS_3                            0                             10

Clustering(66) Variable = Del Peak 37(18q21.2) mutation analysis
D66V1, multiclass
D66V2, multiclass
D66V3, multiclass
        clus
vv       DEL PEAK 37(18Q21.2) MUTATED DEL PEAK 37(18Q21.2) WILD-TYPE
  CLUS_1                           45                             34
  CLUS_2                           49                             33
  CLUS_3                           22                             23
D66V4, multiclass
        clus
vv       DEL PEAK 37(18Q21.2) MUTATED DEL PEAK 37(18Q21.2) WILD-TYPE
  CLUS_1                           59                             51
  CLUS_2                           49                             31
  CLUS_3                            8                              8
D66V5, multiclass
        clus
vv       DEL PEAK 37(18Q21.2) MUTATED DEL PEAK 37(18Q21.2) WILD-TYPE
  CLUS_1                           49                             69
  CLUS_2                           59                             32
  CLUS_3                           51                             39
D66V6, multiclass
        clus
vv       DEL PEAK 37(18Q21.2) MUTATED DEL PEAK 37(18Q21.2) WILD-TYPE
  CLUS_1                           60                             35
  CLUS_2                           48                             36
  CLUS_3                           51                             69
D66V7, multiclass
        clus
vv       DEL PEAK 37(18Q21.2) MUTATED DEL PEAK 37(18Q21.2) WILD-TYPE
  CLUS_1                           59                             42
  CLUS_2                           54                             73
  CLUS_3                           56                             37
D66V8, multiclass
        clus
vv       DEL PEAK 37(18Q21.2) MUTATED DEL PEAK 37(18Q21.2) WILD-TYPE
  CLUS_1                           84                             97
  CLUS_2                           78                             52
  CLUS_3                            7                              3

Clustering(67) Variable = Del Peak 38(18q23) mutation analysis
D67V1, multiclass
D67V2, multiclass
D67V3, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         51                           28
  CLUS_2                         54                           28
  CLUS_3                         22                           23
D67V4, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         62                           48
  CLUS_2                         55                           25
  CLUS_3                         10                            6
D67V5, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         53                           65
  CLUS_2                         62                           29
  CLUS_3                         55                           35
D67V6, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         65                           30
  CLUS_2                         50                           34
  CLUS_3                         55                           65
D67V7, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         63                           38
  CLUS_2                         59                           68
  CLUS_3                         59                           34
D67V8, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         91                           90
  CLUS_2                         84                           46
  CLUS_3                          6                            4

Clustering(68) Variable = Del Peak 39(19p13.3) mutation analysis
D68V1, multiclass
D68V2, multiclass
D68V3, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           31                             48
  CLUS_2                           29                             53
  CLUS_3                           18                             27
D68V4, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           34                             76
  CLUS_2                           36                             44
  CLUS_3                            8                              8
D68V5, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           38                             80
  CLUS_2                           39                             52
  CLUS_3                           25                             65
D68V6, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           34                             61
  CLUS_2                           30                             54
  CLUS_3                           38                             82
D68V7, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           32                             69
  CLUS_2                           46                             81
  CLUS_3                           31                             62
D68V8, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           59                            122
  CLUS_2                           46                             84
  CLUS_3                            4                              6

Clustering(69) Variable = Del Peak 40(19q13.43) mutation analysis
D69V1, multiclass
D69V2, multiclass
D69V3, multiclass
        clus
vv       DEL PEAK 40(19Q13.43) MUTATED DEL PEAK 40(19Q13.43) WILD-TYPE
  CLUS_1                            19                              60
  CLUS_2                            15                              67
  CLUS_3                            10                              35
D69V4, multiclass
        clus
vv       DEL PEAK 40(19Q13.43) MUTATED DEL PEAK 40(19Q13.43) WILD-TYPE
  CLUS_1                            19                              91
  CLUS_2                            19                              61
  CLUS_3                             6                              10
D69V5, multiclass
        clus
vv       DEL PEAK 40(19Q13.43) MUTATED DEL PEAK 40(19Q13.43) WILD-TYPE
  CLUS_1                            26                              92
  CLUS_2                            15                              76
  CLUS_3                            16                              74
D69V6, multiclass
        clus
vv       DEL PEAK 40(19Q13.43) MUTATED DEL PEAK 40(19Q13.43) WILD-TYPE
  CLUS_1                            13                              82
  CLUS_2                            18                              66
  CLUS_3                            26                              94
D69V7, multiclass
        clus
vv       DEL PEAK 40(19Q13.43) MUTATED DEL PEAK 40(19Q13.43) WILD-TYPE
  CLUS_1                            21                              80
  CLUS_2                            31                              96
  CLUS_3                            11                              82
D69V8, multiclass
        clus
vv       DEL PEAK 40(19Q13.43) MUTATED DEL PEAK 40(19Q13.43) WILD-TYPE
  CLUS_1                            38                             143
  CLUS_2                            23                             107
  CLUS_3                             2                               8

Clustering(70) Variable = Del Peak 41(Xp21.3) mutation analysis
D70V1, multiclass
D70V2, multiclass
D70V3, multiclass
        clus
vv       DEL PEAK 41(XP21.3) MUTATED DEL PEAK 41(XP21.3) WILD-TYPE
  CLUS_1                          23                            56
  CLUS_2                          36                            46
  CLUS_3                          15                            30
D70V4, multiclass
        clus
vv       DEL PEAK 41(XP21.3) MUTATED DEL PEAK 41(XP21.3) WILD-TYPE
  CLUS_1                          41                            69
  CLUS_2                          23                            57
  CLUS_3                          10                             6
D70V5, multiclass
        clus
vv       DEL PEAK 41(XP21.3) MUTATED DEL PEAK 41(XP21.3) WILD-TYPE
  CLUS_1                          42                            76
  CLUS_2                          31                            60
  CLUS_3                          23                            67
D70V6, multiclass
        clus
vv       DEL PEAK 41(XP21.3) MUTATED DEL PEAK 41(XP21.3) WILD-TYPE
  CLUS_1                          34                            61
  CLUS_2                          18                            66
  CLUS_3                          44                            76
D70V7, multiclass
        clus
vv       DEL PEAK 41(XP21.3) MUTATED DEL PEAK 41(XP21.3) WILD-TYPE
  CLUS_1                          27                            74
  CLUS_2                          50                            77
  CLUS_3                          29                            64
D70V8, multiclass
        clus
vv       DEL PEAK 41(XP21.3) MUTATED DEL PEAK 41(XP21.3) WILD-TYPE
  CLUS_1                          58                           123
  CLUS_2                          44                            86
  CLUS_3                           4                             6

Clustering(71) Variable = Del Peak 42(Xp11.3) mutation analysis
D71V1, multiclass
D71V2, multiclass
D71V3, multiclass
        clus
vv       DEL PEAK 42(XP11.3) MUTATED DEL PEAK 42(XP11.3) WILD-TYPE
  CLUS_1                          23                            56
  CLUS_2                          36                            46
  CLUS_3                          15                            30
D71V4, multiclass
        clus
vv       DEL PEAK 42(XP11.3) MUTATED DEL PEAK 42(XP11.3) WILD-TYPE
  CLUS_1                          42                            68
  CLUS_2                          21                            59
  CLUS_3                          11                             5
D71V5, multiclass
        clus
vv       DEL PEAK 42(XP11.3) MUTATED DEL PEAK 42(XP11.3) WILD-TYPE
  CLUS_1                          43                            75
  CLUS_2                          32                            59
  CLUS_3                          23                            67
D71V6, multiclass
        clus
vv       DEL PEAK 42(XP11.3) MUTATED DEL PEAK 42(XP11.3) WILD-TYPE
  CLUS_1                          34                            61
  CLUS_2                          19                            65
  CLUS_3                          45                            75
D71V7, multiclass
        clus
vv       DEL PEAK 42(XP11.3) MUTATED DEL PEAK 42(XP11.3) WILD-TYPE
  CLUS_1                          28                            73
  CLUS_2                          50                            77
  CLUS_3                          30                            63
D71V8, multiclass
        clus
vv       DEL PEAK 42(XP11.3) MUTATED DEL PEAK 42(XP11.3) WILD-TYPE
  CLUS_1                          59                           122
  CLUS_2                          43                            87
  CLUS_3                           6                             4

Clustering(72) Variable = Del Peak 43(Xq21.33) mutation analysis
D72V1, multiclass
D72V2, multiclass
D72V3, multiclass
        clus
vv       DEL PEAK 43(XQ21.33) MUTATED DEL PEAK 43(XQ21.33) WILD-TYPE
  CLUS_1                            9                             70
  CLUS_2                           20                             62
  CLUS_3                            4                             41
D72V4, multiclass
        clus
vv       DEL PEAK 43(XQ21.33) MUTATED DEL PEAK 43(XQ21.33) WILD-TYPE
  CLUS_1                           20                             90
  CLUS_2                           11                             69
  CLUS_3                            2                             14
D72V5, multiclass
        clus
vv       DEL PEAK 43(XQ21.33) MUTATED DEL PEAK 43(XQ21.33) WILD-TYPE
  CLUS_1                           32                             86
  CLUS_2                            9                             82
  CLUS_3                           10                             80
D72V6, multiclass
        clus
vv       DEL PEAK 43(XQ21.33) MUTATED DEL PEAK 43(XQ21.33) WILD-TYPE
  CLUS_1                           10                             85
  CLUS_2                           11                             73
  CLUS_3                           30                             90
D72V7, multiclass
        clus
vv       DEL PEAK 43(XQ21.33) MUTATED DEL PEAK 43(XQ21.33) WILD-TYPE
  CLUS_1                           12                             89
  CLUS_2                           35                             92
  CLUS_3                            8                             85
D72V8, multiclass
        clus
vv       DEL PEAK 43(XQ21.33) MUTATED DEL PEAK 43(XQ21.33) WILD-TYPE
  CLUS_1                           41                            140
  CLUS_2                           12                            118
  CLUS_3                            2                              8
                     V1                      V2                      V3 
              "CN_CNMF"      "METHLYATION_CNMF"             "RPPA_CNMF" 
                     V4                      V5                      V6 
   "RPPA_CHIERARCHICAL"          "MRNASEQ_CNMF" "MRNASEQ_CHIERARCHICAL" 
                     V7                      V8 
          "MIRSEQ_CNMF"  "MIRSEQ_CHIERARCHICAL" 
> q(save="no")
