
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.81.4078/Clusters2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.81.4078/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/350181/LAML-TB.mutsig.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/LAML-TB/2638908/1.GDAC_clinicalDataPicker.Finished/LAML-TB.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"  "-oT="
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=200, in cluster file=197, common to both=197
[1] "Reduce the number of clustering variables from 28 to 24."
[1]  24 197
[1] "NRAS MUTATION ANALYSIS"
[1] 3
  NRAS MUTATED NRAS WILD-TYPE 
            15            182 
  NRAS MUTATED NRAS WILD-TYPE 
            15            182 
[1] "WT1 MUTATION ANALYSIS"
[1] 3
  WT1 MUTATED WT1 WILD-TYPE 
           12           185 
  WT1 MUTATED WT1 WILD-TYPE 
           12           185 
[1] "RUNX1 MUTATION ANALYSIS"
[1] 3
  RUNX1 MUTATED RUNX1 WILD-TYPE 
             18             179 
  RUNX1 MUTATED RUNX1 WILD-TYPE 
             18             179 
[1] "DNMT3A MUTATION ANALYSIS"
[1] 3
  DNMT3A MUTATED DNMT3A WILD-TYPE 
              51              146 
  DNMT3A MUTATED DNMT3A WILD-TYPE 
              51              146 
[1] "FLT3 MUTATION ANALYSIS"
[1] 3
  FLT3 MUTATED FLT3 WILD-TYPE 
            56            141 
  FLT3 MUTATED FLT3 WILD-TYPE 
            56            141 
[1] "IDH1 MUTATION ANALYSIS"
[1] 3
  IDH1 MUTATED IDH1 WILD-TYPE 
            19            178 
  IDH1 MUTATED IDH1 WILD-TYPE 
            19            178 
[1] "IDH2 MUTATION ANALYSIS"
[1] 3
  IDH2 MUTATED IDH2 WILD-TYPE 
            20            177 
  IDH2 MUTATED IDH2 WILD-TYPE 
            20            177 
[1] "NPM1 MUTATION ANALYSIS"
[1] 3
  NPM1 MUTATED NPM1 WILD-TYPE 
            54            143 
  NPM1 MUTATED NPM1 WILD-TYPE 
            54            143 
[1] "U2AF1 MUTATION ANALYSIS"
[1] 3
  U2AF1 MUTATED U2AF1 WILD-TYPE 
              8             189 
  U2AF1 MUTATED U2AF1 WILD-TYPE 
              8             189 
[1] "TP53 MUTATION ANALYSIS"
[1] 3
  TP53 MUTATED TP53 WILD-TYPE 
            15            182 
  TP53 MUTATED TP53 WILD-TYPE 
            15            182 
[1] "KRAS MUTATION ANALYSIS"
[1] 3
  KRAS MUTATED KRAS WILD-TYPE 
             8            189 
  KRAS MUTATED KRAS WILD-TYPE 
             8            189 
[1] "PTPN11 MUTATION ANALYSIS"
[1] 3
  PTPN11 MUTATED PTPN11 WILD-TYPE 
               9              188 
  PTPN11 MUTATED PTPN11 WILD-TYPE 
               9              188 
[1] "TET2 MUTATION ANALYSIS"
[1] 3
  TET2 MUTATED TET2 WILD-TYPE 
            17            180 
  TET2 MUTATED TET2 WILD-TYPE 
            17            180 
[1] "KIT MUTATION ANALYSIS"
[1] 3
  KIT MUTATED KIT WILD-TYPE 
            8           189 
  KIT MUTATED KIT WILD-TYPE 
            8           189 
[1] "PHF6 MUTATION ANALYSIS"
[1] 3
  PHF6 MUTATED PHF6 WILD-TYPE 
             6            191 
  PHF6 MUTATED PHF6 WILD-TYPE 
             6            191 
[1] "SMC1A MUTATION ANALYSIS"
[1] 3
  SMC1A MUTATED SMC1A WILD-TYPE 
              7             190 
  SMC1A MUTATED SMC1A WILD-TYPE 
              7             190 
[1] "SMC3 MUTATION ANALYSIS"
[1] 3
  SMC3 MUTATED SMC3 WILD-TYPE 
             7            190 
  SMC3 MUTATED SMC3 WILD-TYPE 
             7            190 
[1] "RAD21 MUTATION ANALYSIS"
[1] 3
  RAD21 MUTATED RAD21 WILD-TYPE 
              5             192 
  RAD21 MUTATED RAD21 WILD-TYPE 
              5             192 
[1] "STAG2 MUTATION ANALYSIS"
[1] 3
  STAG2 MUTATED STAG2 WILD-TYPE 
              6             191 
  STAG2 MUTATED STAG2 WILD-TYPE 
              6             191 
[1] "FAM5C MUTATION ANALYSIS"
[1] 3
  FAM5C MUTATED FAM5C WILD-TYPE 
              5             192 
  FAM5C MUTATED FAM5C WILD-TYPE 
              5             192 
[1] "EZH2 MUTATION ANALYSIS"
[1] 3
  EZH2 MUTATED EZH2 WILD-TYPE 
             3            194 
  EZH2 MUTATED EZH2 WILD-TYPE 
             3            194 
[1] "ASXL1 MUTATION ANALYSIS"
[1] 3
  ASXL1 MUTATED ASXL1 WILD-TYPE 
              5             192 
  ASXL1 MUTATED ASXL1 WILD-TYPE 
              5             192 
[1] "PHACTR1 MUTATION ANALYSIS"
[1] 3
  PHACTR1 MUTATED PHACTR1 WILD-TYPE 
                3               194 
  PHACTR1 MUTATED PHACTR1 WILD-TYPE 
                3               194 
[1] "DIS3 MUTATION ANALYSIS"
[1] 3
  DIS3 MUTATED DIS3 WILD-TYPE 
             3            194 
  DIS3 MUTATED DIS3 WILD-TYPE 
             3            194 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                     "DAYSTODEATH"                     
 [3] "DAYSTOLASTFOLLOWUP"               "VITALSTATUS"                     
 [5] "DCCUPLOADDATE"                    "PRIMARYSITEOFDESEASE"            
 [7] "GENDER"                           "DATEOFINITIALPATHOLOGICDIAGNOSIS"
 [9] "DAYSTOLASTKNOWNALIVE"             "KARNOFSKYPERFORMANCESCORE"       
[11] "BATCHNUMBER"                     

Input Data has 11 rows and 197 columns.

[1] "Batch" "11"   
[1] "Last Follow UP"
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
          NA           NA         2556           NA           NA           NA 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
        2861           NA           NA           NA           NA           NA 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2820 
          NA           NA           NA           NA         2496           NA 
TCGA-AB-2821 TCGA-AB-2822 TCGA-AB-2823 TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 
          NA           NA           NA           NA           NA           NA 
TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 
          NA         2284           NA           NA           NA           NA 
TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2837 TCGA-AB-2838 
          NA           NA         1673           NA           NA           NA 
TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2842 TCGA-AB-2843 TCGA-AB-2844 
          NA           NA           NA           NA           NA           NA 
TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 
          NA           NA           NA           NA         2220           NA 
TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 
          NA           NA           NA           NA           NA           NA 
TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2861 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 
          NA           NA           NA         1430           NA           NA 
TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 
          NA           NA           NA           NA          243           NA 
TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 
         153          638          273          396          212         1219 
TCGA-AB-2877 TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 
         638           NA          245          424          393           NA 
TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2887 TCGA-AB-2888 
         730           NA           NA          181           NA          334 
TCGA-AB-2889 TCGA-AB-2890 TCGA-AB-2891 TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 
         304           NA           NA          942           NA           NA 
TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2900 
          NA           NA          243          393           NA           NA 
TCGA-AB-2901 TCGA-AB-2903 TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2907 
          58           NA           NA         1610          577           NA 
TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2910 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 
          NA           30           NA         1186           NA         1216 
TCGA-AB-2914 TCGA-AB-2915 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2918 TCGA-AB-2919 
         792           NA          882         1216           NA           61 
TCGA-AB-2920 TCGA-AB-2921 TCGA-AB-2922 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 
          NA           NA           NA           NA           90           NA 
TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2930 TCGA-AB-2931 
          NA           NA           59           NA           NA           NA 
TCGA-AB-2932 TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 
          NA           NA           28           NA           59           NA 
TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2940 TCGA-AB-2941 TCGA-AB-2942 TCGA-AB-2943 
          NA          455           NA           NA          641           NA 
TCGA-AB-2945 TCGA-AB-2946 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 
          NA           NA           31           NA          699          306 
TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 
          NA         1492           NA           NA          608           NA 
TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 
          NA         1277           NA           NA         1035           NA 
TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 
        1127           NA           NA           NA           NA           NA 
TCGA-AB-2975 TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 
          NA           NA           NA          699          671          699 
TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 
         487          149           NA         1156           NA           NA 
TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 
          NA           NA           NA          457         1826           NA 
TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2997 TCGA-AB-2998 
          NA         1798         1551         1581           NA           NA 
TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 
        1734         1249         1581           NA         2099           NA 
TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
        1581           NA           NA         1885         1887 
Variable 1:'AGE':	nDistinctValues=62,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=66,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=59,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=10,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 10:'KARNOFSKY.PERFORMANCE.SCORE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'BATCH.NUMBER':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"    "GENDER"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 197 columns, 1 survival variables, and 2 non-survival variables.
AGE, nv=62, binary=FALSE, numeric=TRUE
GENDER, nv=2, binary=FALSE, numeric=FALSE

Clustering(1) Variable = NRAS MUTATION ANALYSIS
D1V1, survival
                sevent
clus2              0   1
  NRAS MUTATED     5   8
  NRAS WILD-TYPE  60 100
  NRAS MUTATED NRAS WILD-TYPE 
            13            160 
  NRAS MUTATED NRAS WILD-TYPE 
             8            100 
$`NRAS MUTATED`
TCGA-AB-2808 TCGA-AB-2816 TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2870 TCGA-AB-2892 
       94.06         8.05        12.00        15.98         5.00        30.97 
TCGA-AB-2923 TCGA-AB-2952 TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2978 TCGA-AB-2984 
        1.02         1.02        34.03        15.06        22.98        38.01 
TCGA-AB-2985 
        8.98 

$`NRAS WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 TCGA-AB-2814 
        2.04         1.02         7.99        12.03         1.02        26.04 
TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 TCGA-AB-2822 TCGA-AB-2824 
        8.98         9.96        82.06        26.99        31.96         0.99 
TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 TCGA-AB-2830 
        6.94        24.03         8.98        75.09         8.98         9.04 
TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 
       21.04        12.00        14.99         8.05        55.00        17.00 
TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 
        0.92        46.06         7.07         3.98         9.96        46.09 
TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 TCGA-AB-2851 TCGA-AB-2853 
       19.96        14.96        72.99         1.97         7.96         2.89 
TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 
       12.03         6.94        10.06        18.94         9.96        14.01 
TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2867 
       47.01         1.02        18.97         2.01         5.00         6.05 
TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 
        4.96         7.99         5.03        20.98         8.98        13.02 
TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 
        6.97        40.08        20.98        12.00         8.05        13.94 
TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 
       12.92        12.00        24.00        24.03         7.04         5.95 
TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 
       10.98         9.99         6.97         5.92         5.03         7.00 
TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 
        7.99        12.92        22.06         6.02         1.91        16.96 
TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 
       52.93        18.97         1.02         0.99        38.99         9.01 
TCGA-AB-2913 TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 
       39.98        26.04        29.00        39.98         2.01        12.03 
TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 
        2.96         7.96        14.99         2.93         1.94         4.04 
TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 
        4.01         0.92         1.97         1.94         7.07         9.96 
TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 
       14.96        21.07         7.99         1.02        19.07        22.98 
TCGA-AB-2950 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 
       10.06        49.05        16.08         6.02        19.99        16.08 
TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2969 TCGA-AB-2970 
       53.95        41.98        11.01        28.08        37.05        10.03 
TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2977 
       26.04         0.99        20.02         3.02        30.08         0.99 
TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2986 
       22.06        22.98        16.01         4.90        11.01         6.97 
TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 
        6.05         0.99        12.00        15.02        60.03        56.09 
TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 
       25.02        59.11        50.99        51.98         1.02        57.01 
TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 
       41.06        51.98        47.05        69.01        15.91        51.98 
TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       27.02        18.94        61.97        62.04 

  NRAS MUTATED NRAS WILD-TYPE 
          1.02           0.92 
  NRAS MUTATED NRAS WILD-TYPE 
         94.06          84.03 
  NRAS MUTATED NRAS WILD-TYPE 
         15.06          12.03 
[1] "1.0 - 94.1 (15.1)" "0.9 - 84.0 (12.0)"
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-3012 
"NRAS WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-3012 
"NRAS WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-AB-3012 
"NRAS WILD-TYPE" 
[1] "hr=" "1.1"
D1V2, continuous
D1V3, binary
                cls
clus              0  1
  NRAS MUTATED    7  8
  NRAS WILD-TYPE 84 98
[1] "tbl2"
                cls
clus             [,1] [,2]
  NRAS MUTATED      7    8
  NRAS WILD-TYPE   84   98
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  FEMALE            7             84
  MALE              8             98

Clustering(2) Variable = WT1 MUTATION ANALYSIS
D2V1, survival
               sevent
clus2             0   1
  WT1 MUTATED     4   7
  WT1 WILD-TYPE  61 101
  WT1 MUTATED WT1 WILD-TYPE 
           11           162 
  WT1 MUTATED WT1 WILD-TYPE 
            7           101 
$`WT1 MUTATED`
TCGA-AB-2839 TCGA-AB-2844 TCGA-AB-2846 TCGA-AB-2874 TCGA-AB-2905 TCGA-AB-2913 
       15.98         3.98        46.09        13.02        52.93        39.98 
TCGA-AB-2919 TCGA-AB-2970 TCGA-AB-2976 TCGA-AB-2989 TCGA-AB-3009 
        2.01        10.03        30.08        12.00        18.94 

$`WT1 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
       94.06         2.04         1.02         7.99        12.03         1.02 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 
       26.04         8.05         8.98         9.96        82.06        26.99 
TCGA-AB-2822 TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 
       31.96         0.99         6.94        24.03         8.98        75.09 
TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 
        8.98         9.04        21.04        12.00        14.99         8.05 
TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 
       55.00        17.00        12.00         0.92        46.06         7.07 
TCGA-AB-2845 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 TCGA-AB-2851 
        9.96        19.96        14.96        72.99         1.97         7.96 
TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 
        2.89        12.03         6.94        10.06        18.94         9.96 
TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2866 
       14.01        47.01         1.02        18.97         2.01         5.00 
TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 
        6.05         4.96         7.99         5.00         5.03        20.98 
TCGA-AB-2873 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2878 TCGA-AB-2879 
        8.98         6.97        40.08        20.98        12.00         8.05 
TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 
       13.94        12.92        12.00        24.00        24.03         7.04 
TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 
        5.95        10.98         9.99        30.97         6.97         5.92 
TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2900 
        5.03         7.00         7.99        12.92        22.06         6.02 
TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2906 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 
        1.91        16.96        18.97         1.02         0.99        38.99 
TCGA-AB-2912 TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2920 TCGA-AB-2923 
        9.01        26.04        29.00        39.98        12.03         1.02 
TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 
        2.96         7.96        14.99         2.93         1.94         4.04 
TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 
        4.01         0.92         1.97         1.94         7.07         9.96 
TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 
       14.96        21.07         7.99         1.02        19.07        22.98 
TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 
       10.06         1.02        49.05        16.08         6.02        19.99 
TCGA-AB-2959 TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 
       16.08        53.95        41.98        11.01        28.08        34.03 
TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 
       15.06        37.05        26.04         0.99        20.02         3.02 
TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 
        0.99        22.98        22.06        22.98        16.01         4.90 
TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 
       11.01        38.01         8.98         6.97         6.05         0.99 
TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 
       15.02        60.03        56.09        25.02        59.11        50.99 
TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 
       51.98         1.02        57.01        41.06        51.98        47.05 
TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3011 TCGA-AB-3012 
       69.01        15.91        51.98        27.02        61.97        62.04 

  WT1 MUTATED WT1 WILD-TYPE 
         2.01          0.92 
  WT1 MUTATED WT1 WILD-TYPE 
        52.93         94.06 
  WT1 MUTATED WT1 WILD-TYPE 
       15.980        12.015 
[1] "2.0 - 52.9 (16.0)" "0.9 - 94.1 (12.0)"
   TCGA-AB-2802    TCGA-AB-2803    TCGA-AB-2804    TCGA-AB-2805    TCGA-AB-2806 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2807    TCGA-AB-2808    TCGA-AB-2809    TCGA-AB-2810    TCGA-AB-2811 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2812    TCGA-AB-2813    TCGA-AB-2814    TCGA-AB-2816    TCGA-AB-2817 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2818    TCGA-AB-2819    TCGA-AB-2821    TCGA-AB-2822    TCGA-AB-2824 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2825    TCGA-AB-2826    TCGA-AB-2827    TCGA-AB-2828    TCGA-AB-2829 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2830    TCGA-AB-2831    TCGA-AB-2832    TCGA-AB-2833    TCGA-AB-2834 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2835    TCGA-AB-2836    TCGA-AB-2838    TCGA-AB-2839    TCGA-AB-2840 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE"   "WT1 MUTATED" "WT1 WILD-TYPE" 
   TCGA-AB-2841    TCGA-AB-2843    TCGA-AB-2844    TCGA-AB-2845    TCGA-AB-2846 
"WT1 WILD-TYPE" "WT1 WILD-TYPE"   "WT1 MUTATED" "WT1 WILD-TYPE"   "WT1 MUTATED" 
   TCGA-AB-2847    TCGA-AB-2848    TCGA-AB-2849    TCGA-AB-2850    TCGA-AB-2851 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2853    TCGA-AB-2854    TCGA-AB-2855    TCGA-AB-2857    TCGA-AB-2858 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2859    TCGA-AB-2860    TCGA-AB-2862    TCGA-AB-2863    TCGA-AB-2864 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2865    TCGA-AB-2866    TCGA-AB-2867    TCGA-AB-2868    TCGA-AB-2869 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2870    TCGA-AB-2871    TCGA-AB-2872    TCGA-AB-2873    TCGA-AB-2874 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE"   "WT1 MUTATED" 
   TCGA-AB-2875    TCGA-AB-2876    TCGA-AB-2877    TCGA-AB-2878    TCGA-AB-2879 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2880    TCGA-AB-2881    TCGA-AB-2882    TCGA-AB-2883    TCGA-AB-2884 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2885    TCGA-AB-2886    TCGA-AB-2888    TCGA-AB-2889    TCGA-AB-2892 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2893    TCGA-AB-2894    TCGA-AB-2895    TCGA-AB-2896    TCGA-AB-2897 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2898    TCGA-AB-2899    TCGA-AB-2900    TCGA-AB-2901    TCGA-AB-2904 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2905    TCGA-AB-2906    TCGA-AB-2908    TCGA-AB-2909    TCGA-AB-2911 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2912    TCGA-AB-2913    TCGA-AB-2914    TCGA-AB-2916    TCGA-AB-2917 
"WT1 WILD-TYPE"   "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2919    TCGA-AB-2920    TCGA-AB-2923    TCGA-AB-2924    TCGA-AB-2925 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2926    TCGA-AB-2927    TCGA-AB-2928    TCGA-AB-2929    TCGA-AB-2933 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2934    TCGA-AB-2935    TCGA-AB-2936    TCGA-AB-2937    TCGA-AB-2938 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2939    TCGA-AB-2942    TCGA-AB-2945    TCGA-AB-2947    TCGA-AB-2948 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2949    TCGA-AB-2950    TCGA-AB-2952    TCGA-AB-2954    TCGA-AB-2955 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2956    TCGA-AB-2957    TCGA-AB-2959    TCGA-AB-2963    TCGA-AB-2964 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2965    TCGA-AB-2966    TCGA-AB-2967    TCGA-AB-2968    TCGA-AB-2969 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2970    TCGA-AB-2971    TCGA-AB-2972    TCGA-AB-2973    TCGA-AB-2974 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2976    TCGA-AB-2977    TCGA-AB-2978    TCGA-AB-2979    TCGA-AB-2980 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2981    TCGA-AB-2982    TCGA-AB-2983    TCGA-AB-2984    TCGA-AB-2985 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2986    TCGA-AB-2987    TCGA-AB-2988    TCGA-AB-2989    TCGA-AB-2990 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE"   "WT1 MUTATED" "WT1 WILD-TYPE" 
   TCGA-AB-2991    TCGA-AB-2992    TCGA-AB-2993    TCGA-AB-2994    TCGA-AB-2995 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2996    TCGA-AB-2998    TCGA-AB-2999    TCGA-AB-3000    TCGA-AB-3001 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-3002    TCGA-AB-3005    TCGA-AB-3006    TCGA-AB-3007    TCGA-AB-3008 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-3009    TCGA-AB-3011    TCGA-AB-3012 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2802    TCGA-AB-2803    TCGA-AB-2804    TCGA-AB-2805    TCGA-AB-2806 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2807    TCGA-AB-2808    TCGA-AB-2809    TCGA-AB-2810    TCGA-AB-2811 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2812    TCGA-AB-2813    TCGA-AB-2814    TCGA-AB-2816    TCGA-AB-2817 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2818    TCGA-AB-2819    TCGA-AB-2821    TCGA-AB-2822    TCGA-AB-2824 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2825    TCGA-AB-2826    TCGA-AB-2827    TCGA-AB-2828    TCGA-AB-2829 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2830    TCGA-AB-2831    TCGA-AB-2832    TCGA-AB-2833    TCGA-AB-2834 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2835    TCGA-AB-2836    TCGA-AB-2838    TCGA-AB-2839    TCGA-AB-2840 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE"   "WT1 MUTATED" "WT1 WILD-TYPE" 
   TCGA-AB-2841    TCGA-AB-2843    TCGA-AB-2844    TCGA-AB-2845    TCGA-AB-2846 
"WT1 WILD-TYPE" "WT1 WILD-TYPE"   "WT1 MUTATED" "WT1 WILD-TYPE"   "WT1 MUTATED" 
   TCGA-AB-2847    TCGA-AB-2848    TCGA-AB-2849    TCGA-AB-2850    TCGA-AB-2851 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2853    TCGA-AB-2854    TCGA-AB-2855    TCGA-AB-2857    TCGA-AB-2858 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2859    TCGA-AB-2860    TCGA-AB-2862    TCGA-AB-2863    TCGA-AB-2864 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2865    TCGA-AB-2866    TCGA-AB-2867    TCGA-AB-2868    TCGA-AB-2869 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2870    TCGA-AB-2871    TCGA-AB-2872    TCGA-AB-2873    TCGA-AB-2874 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE"   "WT1 MUTATED" 
   TCGA-AB-2875    TCGA-AB-2876    TCGA-AB-2877    TCGA-AB-2878    TCGA-AB-2879 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2880    TCGA-AB-2881    TCGA-AB-2882    TCGA-AB-2883    TCGA-AB-2884 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2885    TCGA-AB-2886    TCGA-AB-2888    TCGA-AB-2889    TCGA-AB-2892 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2893    TCGA-AB-2894    TCGA-AB-2895    TCGA-AB-2896    TCGA-AB-2897 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2898    TCGA-AB-2899    TCGA-AB-2900    TCGA-AB-2901    TCGA-AB-2904 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2905    TCGA-AB-2906    TCGA-AB-2908    TCGA-AB-2909    TCGA-AB-2911 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2912    TCGA-AB-2913    TCGA-AB-2914    TCGA-AB-2916    TCGA-AB-2917 
"WT1 WILD-TYPE"   "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2919    TCGA-AB-2920    TCGA-AB-2923    TCGA-AB-2924    TCGA-AB-2925 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2926    TCGA-AB-2927    TCGA-AB-2928    TCGA-AB-2929    TCGA-AB-2933 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2934    TCGA-AB-2935    TCGA-AB-2936    TCGA-AB-2937    TCGA-AB-2938 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2939    TCGA-AB-2942    TCGA-AB-2945    TCGA-AB-2947    TCGA-AB-2948 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2949    TCGA-AB-2950    TCGA-AB-2952    TCGA-AB-2954    TCGA-AB-2955 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2956    TCGA-AB-2957    TCGA-AB-2959    TCGA-AB-2963    TCGA-AB-2964 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2965    TCGA-AB-2966    TCGA-AB-2967    TCGA-AB-2968    TCGA-AB-2969 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2970    TCGA-AB-2971    TCGA-AB-2972    TCGA-AB-2973    TCGA-AB-2974 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2976    TCGA-AB-2977    TCGA-AB-2978    TCGA-AB-2979    TCGA-AB-2980 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2981    TCGA-AB-2982    TCGA-AB-2983    TCGA-AB-2984    TCGA-AB-2985 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2986    TCGA-AB-2987    TCGA-AB-2988    TCGA-AB-2989    TCGA-AB-2990 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE"   "WT1 MUTATED" "WT1 WILD-TYPE" 
   TCGA-AB-2991    TCGA-AB-2992    TCGA-AB-2993    TCGA-AB-2994    TCGA-AB-2995 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2996    TCGA-AB-2998    TCGA-AB-2999    TCGA-AB-3000    TCGA-AB-3001 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-3002    TCGA-AB-3005    TCGA-AB-3006    TCGA-AB-3007    TCGA-AB-3008 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-3009    TCGA-AB-3011    TCGA-AB-3012 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2802    TCGA-AB-2803    TCGA-AB-2804    TCGA-AB-2805    TCGA-AB-2806 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2807    TCGA-AB-2808    TCGA-AB-2809    TCGA-AB-2810    TCGA-AB-2811 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2812    TCGA-AB-2813    TCGA-AB-2814    TCGA-AB-2816    TCGA-AB-2817 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2818    TCGA-AB-2819    TCGA-AB-2821    TCGA-AB-2822    TCGA-AB-2824 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2825    TCGA-AB-2826    TCGA-AB-2827    TCGA-AB-2828    TCGA-AB-2829 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2830    TCGA-AB-2831    TCGA-AB-2832    TCGA-AB-2833    TCGA-AB-2834 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2835    TCGA-AB-2836    TCGA-AB-2838    TCGA-AB-2839    TCGA-AB-2840 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE"   "WT1 MUTATED" "WT1 WILD-TYPE" 
   TCGA-AB-2841    TCGA-AB-2843    TCGA-AB-2844    TCGA-AB-2845    TCGA-AB-2846 
"WT1 WILD-TYPE" "WT1 WILD-TYPE"   "WT1 MUTATED" "WT1 WILD-TYPE"   "WT1 MUTATED" 
   TCGA-AB-2847    TCGA-AB-2848    TCGA-AB-2849    TCGA-AB-2850    TCGA-AB-2851 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2853    TCGA-AB-2854    TCGA-AB-2855    TCGA-AB-2857    TCGA-AB-2858 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2859    TCGA-AB-2860    TCGA-AB-2862    TCGA-AB-2863    TCGA-AB-2864 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2865    TCGA-AB-2866    TCGA-AB-2867    TCGA-AB-2868    TCGA-AB-2869 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2870    TCGA-AB-2871    TCGA-AB-2872    TCGA-AB-2873    TCGA-AB-2874 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE"   "WT1 MUTATED" 
   TCGA-AB-2875    TCGA-AB-2876    TCGA-AB-2877    TCGA-AB-2878    TCGA-AB-2879 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2880    TCGA-AB-2881    TCGA-AB-2882    TCGA-AB-2883    TCGA-AB-2884 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2885    TCGA-AB-2886    TCGA-AB-2888    TCGA-AB-2889    TCGA-AB-2892 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2893    TCGA-AB-2894    TCGA-AB-2895    TCGA-AB-2896    TCGA-AB-2897 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2898    TCGA-AB-2899    TCGA-AB-2900    TCGA-AB-2901    TCGA-AB-2904 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2905    TCGA-AB-2906    TCGA-AB-2908    TCGA-AB-2909    TCGA-AB-2911 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2912    TCGA-AB-2913    TCGA-AB-2914    TCGA-AB-2916    TCGA-AB-2917 
"WT1 WILD-TYPE"   "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2919    TCGA-AB-2920    TCGA-AB-2923    TCGA-AB-2924    TCGA-AB-2925 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2926    TCGA-AB-2927    TCGA-AB-2928    TCGA-AB-2929    TCGA-AB-2933 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2934    TCGA-AB-2935    TCGA-AB-2936    TCGA-AB-2937    TCGA-AB-2938 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2939    TCGA-AB-2942    TCGA-AB-2945    TCGA-AB-2947    TCGA-AB-2948 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2949    TCGA-AB-2950    TCGA-AB-2952    TCGA-AB-2954    TCGA-AB-2955 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2956    TCGA-AB-2957    TCGA-AB-2959    TCGA-AB-2963    TCGA-AB-2964 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2965    TCGA-AB-2966    TCGA-AB-2967    TCGA-AB-2968    TCGA-AB-2969 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2970    TCGA-AB-2971    TCGA-AB-2972    TCGA-AB-2973    TCGA-AB-2974 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2976    TCGA-AB-2977    TCGA-AB-2978    TCGA-AB-2979    TCGA-AB-2980 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2981    TCGA-AB-2982    TCGA-AB-2983    TCGA-AB-2984    TCGA-AB-2985 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2986    TCGA-AB-2987    TCGA-AB-2988    TCGA-AB-2989    TCGA-AB-2990 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE"   "WT1 MUTATED" "WT1 WILD-TYPE" 
   TCGA-AB-2991    TCGA-AB-2992    TCGA-AB-2993    TCGA-AB-2994    TCGA-AB-2995 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-2996    TCGA-AB-2998    TCGA-AB-2999    TCGA-AB-3000    TCGA-AB-3001 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-3002    TCGA-AB-3005    TCGA-AB-3006    TCGA-AB-3007    TCGA-AB-3008 
"WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
   TCGA-AB-3009    TCGA-AB-3011    TCGA-AB-3012 
  "WT1 MUTATED" "WT1 WILD-TYPE" "WT1 WILD-TYPE" 
[1] "hr=" "1.2"
D2V2, continuous
D2V3, binary
               cls
clus             0  1
  WT1 MUTATED    5  7
  WT1 WILD-TYPE 86 99
[1] "tbl2"
               cls
clus            [,1] [,2]
  WT1 MUTATED      5    7
  WT1 WILD-TYPE   86   99
        clus
vv       WT1 MUTATED WT1 WILD-TYPE
  FEMALE           5            86
  MALE             7            99

Clustering(3) Variable = RUNX1 MUTATION ANALYSIS
D3V1, survival
                 sevent
clus2              0  1
  RUNX1 MUTATED    3 13
  RUNX1 WILD-TYPE 62 95
  RUNX1 MUTATED RUNX1 WILD-TYPE 
             16             157 
  RUNX1 MUTATED RUNX1 WILD-TYPE 
             13              95 
$`RUNX1 MUTATED`
TCGA-AB-2805 TCGA-AB-2807 TCGA-AB-2821 TCGA-AB-2850 TCGA-AB-2865 TCGA-AB-2899 
       18.94         5.92        26.99         1.97         2.01        22.06 
TCGA-AB-2912 TCGA-AB-2927 TCGA-AB-2933 TCGA-AB-2936 TCGA-AB-2949 TCGA-AB-2959 
        9.01         2.93         4.01         1.94        22.98        16.08 
TCGA-AB-2970 TCGA-AB-2978 TCGA-AB-2983 TCGA-AB-3009 
       10.03        22.98        11.01        18.94 

$`RUNX1 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2806 TCGA-AB-2808 TCGA-AB-2809 
       12.00        26.04        84.03        31.04        94.06         2.04 
TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 TCGA-AB-2814 TCGA-AB-2816 
        1.02         7.99        12.03         1.02        26.04         8.05 
TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2822 TCGA-AB-2824 TCGA-AB-2825 
        8.98         9.96        82.06        31.96         0.99         6.94 
TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 
       24.03         8.98        75.09         8.98         9.04        21.04 
TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2838 
       12.00        14.99         8.05        55.00        17.00        12.00 
TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 TCGA-AB-2844 TCGA-AB-2845 
       15.98         0.92        46.06         7.07         3.98         9.96 
TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2851 TCGA-AB-2853 
       46.09        19.96        14.96        72.99         7.96         2.89 
TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 
       12.03         6.94        10.06        18.94         9.96        14.01 
TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2868 
       47.01         1.02        18.97         5.00         6.05         4.96 
TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 
        7.99         5.00         5.03        20.98         8.98        13.02 
TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 
        6.97        40.08        20.98        12.00         8.05        13.94 
TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 
       12.92        12.00        24.00        24.03         7.04         5.95 
TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 
       10.98         9.99        30.97         6.97         5.92         5.03 
TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 
        7.00         7.99        12.92         6.02         1.91        16.96 
TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2913 
       52.93        18.97         1.02         0.99        38.99        39.98 
TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 
       26.04        29.00        39.98         2.01        12.03         1.02 
TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2934 
        2.96         7.96        14.99         1.94         4.04         0.92 
TCGA-AB-2935 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2945 
        1.97         7.07         9.96        14.96        21.07         7.99 
TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 
        1.02        19.07        10.06         1.02        49.05        16.08 
TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 
        6.02        19.99        53.95        41.98        11.01        28.08 
TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 
       34.03        15.06        37.05        26.04         0.99        20.02 
TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 
        3.02        30.08         0.99        22.06        22.98        16.01 
TCGA-AB-2982 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 
        4.90        38.01         8.98         6.97         6.05         0.99 
TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 
       12.00        15.02        60.03        56.09        25.02        59.11 
TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 
       50.99        51.98         1.02        57.01        41.06        51.98 
TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3011 
       47.05        69.01        15.91        51.98        27.02        61.97 
TCGA-AB-3012 
       62.04 

  RUNX1 MUTATED RUNX1 WILD-TYPE 
           1.94            0.92 
  RUNX1 MUTATED RUNX1 WILD-TYPE 
          26.99           94.06 
  RUNX1 MUTATED RUNX1 WILD-TYPE 
          10.52           12.03 
[1] "1.9 - 27.0 (10.5)" "0.9 - 94.1 (12.0)"
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
  "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
  "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" 
     TCGA-AB-3012 
"RUNX1 WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
  "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
  "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" 
     TCGA-AB-3012 
"RUNX1 WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
  "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
  "RUNX1 MUTATED" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"RUNX1 WILD-TYPE" "RUNX1 WILD-TYPE"   "RUNX1 MUTATED" "RUNX1 WILD-TYPE" 
     TCGA-AB-3012 
"RUNX1 WILD-TYPE" 
[1] "hr=" "1.8"
D3V2, continuous
D3V3, binary
                 cls
clus               0  1
  RUNX1 MUTATED    7 11
  RUNX1 WILD-TYPE 84 95
[1] "tbl2"
                 cls
clus              [,1] [,2]
  RUNX1 MUTATED      7   11
  RUNX1 WILD-TYPE   84   95
        clus
vv       RUNX1 MUTATED RUNX1 WILD-TYPE
  FEMALE             7              84
  MALE              11              95

Clustering(4) Variable = DNMT3A MUTATION ANALYSIS
D4V1, survival
                  sevent
clus2               0  1
  DNMT3A MUTATED   11 35
  DNMT3A WILD-TYPE 54 73
  DNMT3A MUTATED DNMT3A WILD-TYPE 
              46              127 
  DNMT3A MUTATED DNMT3A WILD-TYPE 
              35               73 
$`DNMT3A MUTATED`
TCGA-AB-2802 TCGA-AB-2809 TCGA-AB-2811 TCGA-AB-2816 TCGA-AB-2818 TCGA-AB-2822 
       12.00         2.04         7.99         8.05         9.96        31.96 
TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2833 TCGA-AB-2839 
        0.99         6.94         9.04        21.04        14.99        15.98 
TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2859 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2867 
        7.96         2.89         9.96         1.02        18.97         6.05 
TCGA-AB-2869 TCGA-AB-2873 TCGA-AB-2884 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2898 
        7.99         8.98        24.03         5.03         7.00        12.92 
TCGA-AB-2908 TCGA-AB-2912 TCGA-AB-2916 TCGA-AB-2919 TCGA-AB-2925 TCGA-AB-2928 
        1.02         9.01        29.00         2.01         7.96         1.94 
TCGA-AB-2934 TCGA-AB-2938 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2949 TCGA-AB-2955 
        0.92         9.96         7.99         1.02        22.98        16.08 
TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2974 
       11.01        28.08        34.03        15.06        37.05         3.02 
TCGA-AB-2981 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2993 
       16.01         6.05         0.99        25.02 

$`DNMT3A WILD-TYPE`
TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 TCGA-AB-2808 
       26.04        84.03        18.94        31.04         5.92        94.06 
TCGA-AB-2810 TCGA-AB-2812 TCGA-AB-2813 TCGA-AB-2814 TCGA-AB-2817 TCGA-AB-2819 
        1.02        12.03         1.02        26.04         8.98        82.06 
TCGA-AB-2821 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 TCGA-AB-2832 
       26.99        24.03         8.98        75.09         8.98        12.00 
TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2840 TCGA-AB-2841 
        8.05        55.00        17.00        12.00         0.92        46.06 
TCGA-AB-2843 TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 
        7.07         3.98         9.96        46.09        19.96        14.96 
TCGA-AB-2849 TCGA-AB-2850 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 
       72.99         1.97        12.03         6.94        10.06        18.94 
TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2868 TCGA-AB-2870 
       14.01        47.01         2.01         5.00         4.96         5.00 
TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 
        5.03        20.98        13.02         6.97        40.08        20.98 
TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 
       12.00         8.05        13.94        12.92        12.00        24.00 
TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 
        7.04         5.95        10.98         9.99        30.97         6.97 
TCGA-AB-2894 TCGA-AB-2897 TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 
        5.92         7.99        22.06         6.02         1.91        16.96 
TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2913 TCGA-AB-2914 
       52.93        18.97         0.99        38.99        39.98        26.04 
TCGA-AB-2917 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2926 TCGA-AB-2927 
       39.98        12.03         1.02         2.96        14.99         2.93 
TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2939 
        4.04         4.01         1.97         1.94         7.07        14.96 
TCGA-AB-2942 TCGA-AB-2948 TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2956 
       21.07        19.07        10.06         1.02        49.05         6.02 
TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2970 TCGA-AB-2971 
       19.99        16.08        53.95        41.98        10.03        26.04 
TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 
        0.99        20.02        30.08         0.99        22.98        22.06 
TCGA-AB-2980 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 
       22.98         4.90        11.01        38.01         8.98         6.97 
TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2994 TCGA-AB-2995 
       12.00        15.02        60.03        56.09        59.11        50.99 
TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 
       51.98         1.02        57.01        41.06        51.98        47.05 
TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 
       69.01        15.91        51.98        27.02        18.94        61.97 
TCGA-AB-3012 
       62.04 

  DNMT3A MUTATED DNMT3A WILD-TYPE 
            0.92             0.92 
  DNMT3A MUTATED DNMT3A WILD-TYPE 
           37.05            94.06 
  DNMT3A MUTATED DNMT3A WILD-TYPE 
           8.995           14.960 
[1] "0.9 - 37.0 (9.0)"  "0.9 - 94.1 (15.0)"
      TCGA-AB-2802       TCGA-AB-2803       TCGA-AB-2804       TCGA-AB-2805 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2806       TCGA-AB-2807       TCGA-AB-2808       TCGA-AB-2809 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2810       TCGA-AB-2811       TCGA-AB-2812       TCGA-AB-2813 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2814       TCGA-AB-2816       TCGA-AB-2817       TCGA-AB-2818 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2819       TCGA-AB-2821       TCGA-AB-2822       TCGA-AB-2824 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" 
      TCGA-AB-2825       TCGA-AB-2826       TCGA-AB-2827       TCGA-AB-2828 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2829       TCGA-AB-2830       TCGA-AB-2831       TCGA-AB-2832 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2833       TCGA-AB-2834       TCGA-AB-2835       TCGA-AB-2836 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2838       TCGA-AB-2839       TCGA-AB-2840       TCGA-AB-2841 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2843       TCGA-AB-2844       TCGA-AB-2845       TCGA-AB-2846 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2847       TCGA-AB-2848       TCGA-AB-2849       TCGA-AB-2850 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2851       TCGA-AB-2853       TCGA-AB-2854       TCGA-AB-2855 
  "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2857       TCGA-AB-2858       TCGA-AB-2859       TCGA-AB-2860 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2862       TCGA-AB-2863       TCGA-AB-2864       TCGA-AB-2865 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2866       TCGA-AB-2867       TCGA-AB-2868       TCGA-AB-2869 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2870       TCGA-AB-2871       TCGA-AB-2872       TCGA-AB-2873 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2874       TCGA-AB-2875       TCGA-AB-2876       TCGA-AB-2877 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2878       TCGA-AB-2879       TCGA-AB-2880       TCGA-AB-2881 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2882       TCGA-AB-2883       TCGA-AB-2884       TCGA-AB-2885 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2886       TCGA-AB-2888       TCGA-AB-2889       TCGA-AB-2892 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2893       TCGA-AB-2894       TCGA-AB-2895       TCGA-AB-2896 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" 
      TCGA-AB-2897       TCGA-AB-2898       TCGA-AB-2899       TCGA-AB-2900 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2901       TCGA-AB-2904       TCGA-AB-2905       TCGA-AB-2906 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2908       TCGA-AB-2909       TCGA-AB-2911       TCGA-AB-2912 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2913       TCGA-AB-2914       TCGA-AB-2916       TCGA-AB-2917 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2919       TCGA-AB-2920       TCGA-AB-2923       TCGA-AB-2924 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2925       TCGA-AB-2926       TCGA-AB-2927       TCGA-AB-2928 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2929       TCGA-AB-2933       TCGA-AB-2934       TCGA-AB-2935 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2936       TCGA-AB-2937       TCGA-AB-2938       TCGA-AB-2939 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2942       TCGA-AB-2945       TCGA-AB-2947       TCGA-AB-2948 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2949       TCGA-AB-2950       TCGA-AB-2952       TCGA-AB-2954 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2955       TCGA-AB-2956       TCGA-AB-2957       TCGA-AB-2959 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2963       TCGA-AB-2964       TCGA-AB-2965       TCGA-AB-2966 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" 
      TCGA-AB-2967       TCGA-AB-2968       TCGA-AB-2969       TCGA-AB-2970 
  "DNMT3A MUTATED"   "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2971       TCGA-AB-2972       TCGA-AB-2973       TCGA-AB-2974 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2976       TCGA-AB-2977       TCGA-AB-2978       TCGA-AB-2979 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2980       TCGA-AB-2981       TCGA-AB-2982       TCGA-AB-2983 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2984       TCGA-AB-2985       TCGA-AB-2986       TCGA-AB-2987 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2988       TCGA-AB-2989       TCGA-AB-2990       TCGA-AB-2991 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2992       TCGA-AB-2993       TCGA-AB-2994       TCGA-AB-2995 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2996       TCGA-AB-2998       TCGA-AB-2999       TCGA-AB-3000 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-3001       TCGA-AB-3002       TCGA-AB-3005       TCGA-AB-3006 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-3007       TCGA-AB-3008       TCGA-AB-3009       TCGA-AB-3011 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-3012 
"DNMT3A WILD-TYPE" 
      TCGA-AB-2802       TCGA-AB-2803       TCGA-AB-2804       TCGA-AB-2805 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2806       TCGA-AB-2807       TCGA-AB-2808       TCGA-AB-2809 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2810       TCGA-AB-2811       TCGA-AB-2812       TCGA-AB-2813 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2814       TCGA-AB-2816       TCGA-AB-2817       TCGA-AB-2818 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2819       TCGA-AB-2821       TCGA-AB-2822       TCGA-AB-2824 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" 
      TCGA-AB-2825       TCGA-AB-2826       TCGA-AB-2827       TCGA-AB-2828 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2829       TCGA-AB-2830       TCGA-AB-2831       TCGA-AB-2832 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2833       TCGA-AB-2834       TCGA-AB-2835       TCGA-AB-2836 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2838       TCGA-AB-2839       TCGA-AB-2840       TCGA-AB-2841 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2843       TCGA-AB-2844       TCGA-AB-2845       TCGA-AB-2846 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2847       TCGA-AB-2848       TCGA-AB-2849       TCGA-AB-2850 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2851       TCGA-AB-2853       TCGA-AB-2854       TCGA-AB-2855 
  "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2857       TCGA-AB-2858       TCGA-AB-2859       TCGA-AB-2860 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2862       TCGA-AB-2863       TCGA-AB-2864       TCGA-AB-2865 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2866       TCGA-AB-2867       TCGA-AB-2868       TCGA-AB-2869 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2870       TCGA-AB-2871       TCGA-AB-2872       TCGA-AB-2873 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2874       TCGA-AB-2875       TCGA-AB-2876       TCGA-AB-2877 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2878       TCGA-AB-2879       TCGA-AB-2880       TCGA-AB-2881 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2882       TCGA-AB-2883       TCGA-AB-2884       TCGA-AB-2885 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2886       TCGA-AB-2888       TCGA-AB-2889       TCGA-AB-2892 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2893       TCGA-AB-2894       TCGA-AB-2895       TCGA-AB-2896 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" 
      TCGA-AB-2897       TCGA-AB-2898       TCGA-AB-2899       TCGA-AB-2900 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2901       TCGA-AB-2904       TCGA-AB-2905       TCGA-AB-2906 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2908       TCGA-AB-2909       TCGA-AB-2911       TCGA-AB-2912 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2913       TCGA-AB-2914       TCGA-AB-2916       TCGA-AB-2917 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2919       TCGA-AB-2920       TCGA-AB-2923       TCGA-AB-2924 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2925       TCGA-AB-2926       TCGA-AB-2927       TCGA-AB-2928 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2929       TCGA-AB-2933       TCGA-AB-2934       TCGA-AB-2935 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2936       TCGA-AB-2937       TCGA-AB-2938       TCGA-AB-2939 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2942       TCGA-AB-2945       TCGA-AB-2947       TCGA-AB-2948 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2949       TCGA-AB-2950       TCGA-AB-2952       TCGA-AB-2954 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2955       TCGA-AB-2956       TCGA-AB-2957       TCGA-AB-2959 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2963       TCGA-AB-2964       TCGA-AB-2965       TCGA-AB-2966 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" 
      TCGA-AB-2967       TCGA-AB-2968       TCGA-AB-2969       TCGA-AB-2970 
  "DNMT3A MUTATED"   "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2971       TCGA-AB-2972       TCGA-AB-2973       TCGA-AB-2974 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2976       TCGA-AB-2977       TCGA-AB-2978       TCGA-AB-2979 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2980       TCGA-AB-2981       TCGA-AB-2982       TCGA-AB-2983 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2984       TCGA-AB-2985       TCGA-AB-2986       TCGA-AB-2987 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2988       TCGA-AB-2989       TCGA-AB-2990       TCGA-AB-2991 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2992       TCGA-AB-2993       TCGA-AB-2994       TCGA-AB-2995 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2996       TCGA-AB-2998       TCGA-AB-2999       TCGA-AB-3000 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-3001       TCGA-AB-3002       TCGA-AB-3005       TCGA-AB-3006 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-3007       TCGA-AB-3008       TCGA-AB-3009       TCGA-AB-3011 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-3012 
"DNMT3A WILD-TYPE" 
      TCGA-AB-2802       TCGA-AB-2803       TCGA-AB-2804       TCGA-AB-2805 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2806       TCGA-AB-2807       TCGA-AB-2808       TCGA-AB-2809 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2810       TCGA-AB-2811       TCGA-AB-2812       TCGA-AB-2813 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2814       TCGA-AB-2816       TCGA-AB-2817       TCGA-AB-2818 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2819       TCGA-AB-2821       TCGA-AB-2822       TCGA-AB-2824 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" 
      TCGA-AB-2825       TCGA-AB-2826       TCGA-AB-2827       TCGA-AB-2828 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2829       TCGA-AB-2830       TCGA-AB-2831       TCGA-AB-2832 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2833       TCGA-AB-2834       TCGA-AB-2835       TCGA-AB-2836 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2838       TCGA-AB-2839       TCGA-AB-2840       TCGA-AB-2841 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2843       TCGA-AB-2844       TCGA-AB-2845       TCGA-AB-2846 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2847       TCGA-AB-2848       TCGA-AB-2849       TCGA-AB-2850 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2851       TCGA-AB-2853       TCGA-AB-2854       TCGA-AB-2855 
  "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2857       TCGA-AB-2858       TCGA-AB-2859       TCGA-AB-2860 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2862       TCGA-AB-2863       TCGA-AB-2864       TCGA-AB-2865 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2866       TCGA-AB-2867       TCGA-AB-2868       TCGA-AB-2869 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2870       TCGA-AB-2871       TCGA-AB-2872       TCGA-AB-2873 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2874       TCGA-AB-2875       TCGA-AB-2876       TCGA-AB-2877 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2878       TCGA-AB-2879       TCGA-AB-2880       TCGA-AB-2881 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2882       TCGA-AB-2883       TCGA-AB-2884       TCGA-AB-2885 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2886       TCGA-AB-2888       TCGA-AB-2889       TCGA-AB-2892 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2893       TCGA-AB-2894       TCGA-AB-2895       TCGA-AB-2896 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" 
      TCGA-AB-2897       TCGA-AB-2898       TCGA-AB-2899       TCGA-AB-2900 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2901       TCGA-AB-2904       TCGA-AB-2905       TCGA-AB-2906 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2908       TCGA-AB-2909       TCGA-AB-2911       TCGA-AB-2912 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2913       TCGA-AB-2914       TCGA-AB-2916       TCGA-AB-2917 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2919       TCGA-AB-2920       TCGA-AB-2923       TCGA-AB-2924 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2925       TCGA-AB-2926       TCGA-AB-2927       TCGA-AB-2928 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2929       TCGA-AB-2933       TCGA-AB-2934       TCGA-AB-2935 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2936       TCGA-AB-2937       TCGA-AB-2938       TCGA-AB-2939 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2942       TCGA-AB-2945       TCGA-AB-2947       TCGA-AB-2948 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2949       TCGA-AB-2950       TCGA-AB-2952       TCGA-AB-2954 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2955       TCGA-AB-2956       TCGA-AB-2957       TCGA-AB-2959 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2963       TCGA-AB-2964       TCGA-AB-2965       TCGA-AB-2966 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED"   "DNMT3A MUTATED" 
      TCGA-AB-2967       TCGA-AB-2968       TCGA-AB-2969       TCGA-AB-2970 
  "DNMT3A MUTATED"   "DNMT3A MUTATED"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" 
      TCGA-AB-2971       TCGA-AB-2972       TCGA-AB-2973       TCGA-AB-2974 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2976       TCGA-AB-2977       TCGA-AB-2978       TCGA-AB-2979 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2980       TCGA-AB-2981       TCGA-AB-2982       TCGA-AB-2983 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2984       TCGA-AB-2985       TCGA-AB-2986       TCGA-AB-2987 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE"   "DNMT3A MUTATED" 
      TCGA-AB-2988       TCGA-AB-2989       TCGA-AB-2990       TCGA-AB-2991 
  "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2992       TCGA-AB-2993       TCGA-AB-2994       TCGA-AB-2995 
"DNMT3A WILD-TYPE"   "DNMT3A MUTATED" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-2996       TCGA-AB-2998       TCGA-AB-2999       TCGA-AB-3000 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-3001       TCGA-AB-3002       TCGA-AB-3005       TCGA-AB-3006 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-3007       TCGA-AB-3008       TCGA-AB-3009       TCGA-AB-3011 
"DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" "DNMT3A WILD-TYPE" 
      TCGA-AB-3012 
"DNMT3A WILD-TYPE" 
[1] "hr=" "2"  
D4V2, continuous
D4V3, binary
                  cls
clus                0  1
  DNMT3A MUTATED   27 24
  DNMT3A WILD-TYPE 64 82
[1] "tbl2"
                  cls
clus               [,1] [,2]
  DNMT3A MUTATED     27   24
  DNMT3A WILD-TYPE   64   82
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  FEMALE             27               64
  MALE               24               82

Clustering(5) Variable = FLT3 MUTATION ANALYSIS
D5V1, survival
                sevent
clus2             0  1
  FLT3 MUTATED   18 31
  FLT3 WILD-TYPE 47 77
  FLT3 MUTATED FLT3 WILD-TYPE 
            49            124 
  FLT3 MUTATED FLT3 WILD-TYPE 
            31             77 
$`FLT3 MUTATED`
TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2818 TCGA-AB-2825 
        7.99        12.03        26.04         8.05         9.96         6.94 
TCGA-AB-2830 TCGA-AB-2834 TCGA-AB-2836 TCGA-AB-2840 TCGA-AB-2844 TCGA-AB-2851 
        9.04         8.05        17.00         0.92         3.98         7.96 
TCGA-AB-2853 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2875 TCGA-AB-2877 
        2.89         7.99         5.00         5.03         6.97        20.98 
TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2895 TCGA-AB-2900 TCGA-AB-2906 TCGA-AB-2909 
        8.05        13.94         5.03         6.02        18.97         0.99 
TCGA-AB-2913 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2928 TCGA-AB-2934 
       39.98         2.96         7.96        14.99         1.94         0.92 
TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2957 TCGA-AB-2963 TCGA-AB-2965 
       21.07         7.99         1.02        19.99        53.95        11.01 
TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2980 TCGA-AB-2981 
       37.05        10.03         3.02        30.08        22.98        16.01 
TCGA-AB-2986 TCGA-AB-2988 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2998 TCGA-AB-3006 
        6.97         0.99        25.02        59.11         1.02        15.91 
TCGA-AB-3007 
       51.98 

$`FLT3 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2813 TCGA-AB-2817 TCGA-AB-2819 
       94.06         2.04         1.02         1.02         8.98        82.06 
TCGA-AB-2821 TCGA-AB-2822 TCGA-AB-2824 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 
       26.99        31.96         0.99        24.03         8.98        75.09 
TCGA-AB-2829 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2835 TCGA-AB-2838 
        8.98        21.04        12.00        14.99        55.00        12.00 
TCGA-AB-2839 TCGA-AB-2841 TCGA-AB-2843 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 
       15.98        46.06         7.07         9.96        46.09        19.96 
TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 
       14.96        72.99         1.97        12.03         6.94        10.06 
TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 
       18.94         9.96        14.01        47.01         1.02        18.97 
TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2872 TCGA-AB-2873 
        2.01         5.00         6.05         4.96        20.98         8.98 
TCGA-AB-2874 TCGA-AB-2876 TCGA-AB-2878 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 
       13.02        40.08        12.00        12.92        12.00        24.00 
TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 
       24.03         7.04         5.95        10.98         9.99        30.97 
TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 
        6.97         5.92         7.00         7.99        12.92        22.06 
TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2908 TCGA-AB-2911 TCGA-AB-2912 
        1.91        16.96        52.93         1.02        38.99         9.01 
TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 
       26.04        29.00        39.98         2.01        12.03         1.02 
TCGA-AB-2927 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 
        2.93         4.04         4.01         1.97         1.94         7.07 
TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 TCGA-AB-2952 
        9.96        14.96        19.07        22.98        10.06         1.02 
TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2959 TCGA-AB-2964 TCGA-AB-2966 
       49.05        16.08         6.02        16.08        41.98        28.08 
TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2977 
       34.03        15.06        26.04         0.99        20.02         0.99 
TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 
       22.98        22.06         4.90        11.01        38.01         8.98 
TCGA-AB-2987 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2995 
        6.05        12.00        15.02        60.03        56.09        50.99 
TCGA-AB-2996 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 
       51.98        57.01        41.06        51.98        47.05        69.01 
TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       27.02        18.94        61.97        62.04 

  FLT3 MUTATED FLT3 WILD-TYPE 
          0.92           0.99 
  FLT3 MUTATED FLT3 WILD-TYPE 
         59.11          94.06 
  FLT3 MUTATED FLT3 WILD-TYPE 
          8.05          14.96 
[1] "0.9 - 59.1 (8.1)"  "1.0 - 94.1 (15.0)"
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"FLT3 WILD-TYPE"   "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"FLT3 WILD-TYPE"   "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
  "FLT3 MUTATED"   "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
  "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED"   "FLT3 MUTATED" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"FLT3 WILD-TYPE"   "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-3012 
"FLT3 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"FLT3 WILD-TYPE"   "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"FLT3 WILD-TYPE"   "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
  "FLT3 MUTATED"   "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
  "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED"   "FLT3 MUTATED" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"FLT3 WILD-TYPE"   "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-3012 
"FLT3 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"FLT3 WILD-TYPE"   "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"FLT3 WILD-TYPE"   "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
  "FLT3 MUTATED"   "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
  "FLT3 MUTATED" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED"   "FLT3 MUTATED" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
  "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"FLT3 WILD-TYPE"   "FLT3 MUTATED"   "FLT3 MUTATED" "FLT3 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"FLT3 WILD-TYPE"   "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE"   "FLT3 MUTATED" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
  "FLT3 MUTATED" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" "FLT3 WILD-TYPE" 
    TCGA-AB-3012 
"FLT3 WILD-TYPE" 
[1] "hr=" "1.4"
D5V2, continuous
D5V3, binary
                cls
clus              0  1
  FLT3 MUTATED   27 29
  FLT3 WILD-TYPE 64 77
[1] "tbl2"
                cls
clus             [,1] [,2]
  FLT3 MUTATED     27   29
  FLT3 WILD-TYPE   64   77
        clus
vv       FLT3 MUTATED FLT3 WILD-TYPE
  FEMALE           27             64
  MALE             29             77

Clustering(6) Variable = IDH1 MUTATION ANALYSIS
D6V1, survival
                sevent
clus2             0  1
  IDH1 MUTATED    7 11
  IDH1 WILD-TYPE 58 97
  IDH1 MUTATED IDH1 WILD-TYPE 
            18            155 
  IDH1 MUTATED IDH1 WILD-TYPE 
            11             97 
$`IDH1 MUTATED`
TCGA-AB-2802 TCGA-AB-2821 TCGA-AB-2822 TCGA-AB-2863 TCGA-AB-2867 TCGA-AB-2884 
       12.00        26.99        31.96         1.02         6.05        24.03 
TCGA-AB-2901 TCGA-AB-2919 TCGA-AB-2926 TCGA-AB-2928 TCGA-AB-2945 TCGA-AB-2949 
        1.91         2.01        14.99         1.94         7.99        22.98 
TCGA-AB-2969 TCGA-AB-2977 TCGA-AB-2984 TCGA-AB-2990 TCGA-AB-2992 TCGA-AB-3011 
       37.05         0.99        38.01        15.02        56.09        61.97 

$`IDH1 WILD-TYPE`
TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 TCGA-AB-2808 
       26.04        84.03        18.94        31.04         5.92        94.06 
TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 TCGA-AB-2814 
        2.04         1.02         7.99        12.03         1.02        26.04 
TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2824 TCGA-AB-2825 
        8.05         8.98         9.96        82.06         0.99         6.94 
TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 
       24.03         8.98        75.09         8.98         9.04        21.04 
TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2838 
       12.00        14.99         8.05        55.00        17.00        12.00 
TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 TCGA-AB-2844 TCGA-AB-2845 
       15.98         0.92        46.06         7.07         3.98         9.96 
TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 TCGA-AB-2851 
       46.09        19.96        14.96        72.99         1.97         7.96 
TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 
        2.89        12.03         6.94        10.06        18.94         9.96 
TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2868 
       14.01        47.01        18.97         2.01         5.00         4.96 
TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 
        7.99         5.00         5.03        20.98         8.98        13.02 
TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 
        6.97        40.08        20.98        12.00         8.05        13.94 
TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 
       12.92        12.00        24.00         7.04         5.95        10.98 
TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 
        9.99        30.97         6.97         5.92         5.03         7.00 
TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2904 TCGA-AB-2905 
        7.99        12.92        22.06         6.02        16.96        52.93 
TCGA-AB-2906 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 
       18.97         1.02         0.99        38.99         9.01        39.98 
TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 
       26.04        29.00        39.98        12.03         1.02         2.96 
TCGA-AB-2925 TCGA-AB-2927 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 
        7.96         2.93         4.04         4.01         0.92         1.97 
TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2947 
        1.94         7.07         9.96        14.96        21.07         1.02 
TCGA-AB-2948 TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 
       19.07        10.06         1.02        49.05        16.08         6.02 
TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 
       19.99        16.08        53.95        41.98        11.01        28.08 
TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 
       34.03        15.06        10.03        26.04         0.99        20.02 
TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 
        3.02        30.08        22.98        22.06        22.98        16.01 
TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 
        4.90        11.01         8.98         6.97         6.05         0.99 
TCGA-AB-2989 TCGA-AB-2991 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 
       12.00        60.03        25.02        59.11        50.99        51.98 
TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 
        1.02        57.01        41.06        51.98        47.05        69.01 
TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3012 
       15.91        51.98        27.02        18.94        62.04 

  IDH1 MUTATED IDH1 WILD-TYPE 
          0.99           0.92 
  IDH1 MUTATED IDH1 WILD-TYPE 
         61.97          94.06 
  IDH1 MUTATED IDH1 WILD-TYPE 
        15.005         12.030 
[1] "1.0 - 62.0 (15.0)" "0.9 - 94.1 (12.0)"
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"IDH1 WILD-TYPE"   "IDH1 MUTATED"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE"   "IDH1 MUTATED" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" 
    TCGA-AB-3012 
"IDH1 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"IDH1 WILD-TYPE"   "IDH1 MUTATED"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE"   "IDH1 MUTATED" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" 
    TCGA-AB-3012 
"IDH1 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"IDH1 WILD-TYPE"   "IDH1 MUTATED"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE"   "IDH1 MUTATED" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" 
    TCGA-AB-3012 
"IDH1 WILD-TYPE" 
[1] "hr=" "1.1"
D6V2, continuous
D6V3, binary
                cls
clus              0  1
  IDH1 MUTATED   10  9
  IDH1 WILD-TYPE 81 97
[1] "tbl2"
                cls
clus             [,1] [,2]
  IDH1 MUTATED     10    9
  IDH1 WILD-TYPE   81   97
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  FEMALE           10             81
  MALE              9             97

Clustering(7) Variable = IDH2 MUTATION ANALYSIS
D7V1, survival
                sevent
clus2             0  1
  IDH2 MUTATED    5 13
  IDH2 WILD-TYPE 60 95
  IDH2 MUTATED IDH2 WILD-TYPE 
            18            155 
  IDH2 MUTATED IDH2 WILD-TYPE 
            13             95 
$`IDH2 MUTATED`
TCGA-AB-2805 TCGA-AB-2807 TCGA-AB-2810 TCGA-AB-2821 TCGA-AB-2826 TCGA-AB-2850 
       18.94         5.92         1.02        26.99        24.03         1.97 
TCGA-AB-2864 TCGA-AB-2866 TCGA-AB-2874 TCGA-AB-2877 TCGA-AB-2898 TCGA-AB-2934 
       18.97         5.00        13.02        20.98        12.92         0.92 
TCGA-AB-2936 TCGA-AB-2948 TCGA-AB-2959 TCGA-AB-2966 TCGA-AB-2973 TCGA-AB-3002 
        1.94        19.07        16.08        28.08        20.02        47.05 

$`IDH2 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2806 TCGA-AB-2808 TCGA-AB-2809 
       12.00        26.04        84.03        31.04        94.06         2.04 
TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2817 
        7.99        12.03         1.02        26.04         8.05         8.98 
TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2822 TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2827 
        9.96        82.06        31.96         0.99         6.94         8.98 
TCGA-AB-2828 TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 
       75.09         8.98         9.04        21.04        12.00        14.99 
TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 
        8.05        55.00        17.00        12.00        15.98         0.92 
TCGA-AB-2841 TCGA-AB-2843 TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 
       46.06         7.07         3.98         9.96        46.09        19.96 
TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 
       14.96        72.99         7.96         2.89        12.03         6.94 
TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 
       10.06        18.94         9.96        14.01        47.01         1.02 
TCGA-AB-2865 TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 
        2.01         6.05         4.96         7.99         5.00         5.03 
TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2878 TCGA-AB-2879 
       20.98         8.98         6.97        40.08        12.00         8.05 
TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 
       13.94        12.92        12.00        24.00        24.03         7.04 
TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 
        5.95        10.98         9.99        30.97         6.97         5.92 
TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 
        5.03         7.00         7.99        22.06         6.02         1.91 
TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 
       16.96        52.93        18.97         1.02         0.99        38.99 
TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 
        9.01        39.98        26.04        29.00        39.98         2.01 
TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 
       12.03         1.02         2.96         7.96        14.99         2.93 
TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2935 TCGA-AB-2937 TCGA-AB-2938 
        1.94         4.04         4.01         1.97         7.07         9.96 
TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2949 TCGA-AB-2950 
       14.96        21.07         7.99         1.02        22.98        10.06 
TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2963 
        1.02        49.05        16.08         6.02        19.99        53.95 
TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2970 
       41.98        11.01        34.03        15.06        37.05        10.03 
TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2978 
       26.04         0.99         3.02        30.08         0.99        22.98 
TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 
       22.06        22.98        16.01         4.90        11.01        38.01 
TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 
        8.98         6.97         6.05         0.99        12.00        15.02 
TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 
       60.03        56.09        25.02        59.11        50.99        51.98 
TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3005 TCGA-AB-3006 
        1.02        57.01        41.06        51.98        69.01        15.91 
TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       51.98        27.02        18.94        61.97        62.04 

  IDH2 MUTATED IDH2 WILD-TYPE 
          0.92           0.92 
  IDH2 MUTATED IDH2 WILD-TYPE 
         47.05          94.06 
  IDH2 MUTATED IDH2 WILD-TYPE 
         17.51          12.00 
[1] "0.9 - 47.0 (17.5)" "0.9 - 94.1 (12.0)"
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
  "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
  "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
  "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
  "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-3012 
"IDH2 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
  "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
  "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
  "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
  "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-3012 
"IDH2 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
  "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
  "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
  "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
  "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"IDH2 WILD-TYPE"   "IDH2 MUTATED" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" "IDH2 WILD-TYPE" 
    TCGA-AB-3012 
"IDH2 WILD-TYPE" 
[1] "hr=" "1.2"
D7V2, continuous
D7V3, binary
                cls
clus              0  1
  IDH2 MUTATED   10 10
  IDH2 WILD-TYPE 81 96
[1] "tbl2"
                cls
clus             [,1] [,2]
  IDH2 MUTATED     10   10
  IDH2 WILD-TYPE   81   96
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  FEMALE           10             81
  MALE             10             96

Clustering(8) Variable = NPM1 MUTATION ANALYSIS
D8V1, survival
                sevent
clus2             0  1
  NPM1 MUTATED   15 33
  NPM1 WILD-TYPE 50 75
  NPM1 MUTATED NPM1 WILD-TYPE 
            48            125 
  NPM1 MUTATED NPM1 WILD-TYPE 
            33             75 
$`NPM1 MUTATED`
TCGA-AB-2802 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2816 
       12.00         2.04         1.02         7.99        12.03         8.05 
TCGA-AB-2818 TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2835 TCGA-AB-2836 
        9.96         0.99         6.94        24.03        55.00        17.00 
TCGA-AB-2839 TCGA-AB-2848 TCGA-AB-2853 TCGA-AB-2859 TCGA-AB-2869 TCGA-AB-2871 
       15.98        14.96         2.89         9.96         7.99         5.03 
TCGA-AB-2877 TCGA-AB-2879 TCGA-AB-2884 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2900 
       20.98         8.05        24.03         5.03         7.00         6.02 
TCGA-AB-2913 TCGA-AB-2919 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2945 TCGA-AB-2947 
       39.98         2.01         2.96         7.96         7.99         1.02 
TCGA-AB-2963 TCGA-AB-2965 TCGA-AB-2967 TCGA-AB-2969 TCGA-AB-2972 TCGA-AB-2973 
       53.95        11.01        34.03        37.05         0.99        20.02 
TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2981 TCGA-AB-2984 TCGA-AB-2986 TCGA-AB-2987 
        3.02        30.08        16.01        38.01         6.97         6.05 
TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-3011 
        0.99        12.00        15.02        56.09        25.02        61.97 

$`NPM1 WILD-TYPE`
TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 TCGA-AB-2808 
       26.04        84.03        18.94        31.04         5.92        94.06 
TCGA-AB-2813 TCGA-AB-2814 TCGA-AB-2817 TCGA-AB-2819 TCGA-AB-2821 TCGA-AB-2822 
        1.02        26.04         8.98        82.06        26.99        31.96 
TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 
        8.98        75.09         8.98         9.04        21.04        12.00 
TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2838 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 
       14.99         8.05        12.00         0.92        46.06         7.07 
TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2849 TCGA-AB-2850 
        3.98         9.96        46.09        19.96        72.99         1.97 
TCGA-AB-2851 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2860 
        7.96        12.03         6.94        10.06        18.94        14.01 
TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2867 
       47.01         1.02        18.97         2.01         5.00         6.05 
TCGA-AB-2868 TCGA-AB-2870 TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 
        4.96         5.00        20.98         8.98        13.02         6.97 
TCGA-AB-2876 TCGA-AB-2878 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 
       40.08        12.00        13.94        12.92        12.00        24.00 
TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 
        7.04         5.95        10.98         9.99        30.97         6.97 
TCGA-AB-2894 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2901 TCGA-AB-2904 
        5.92         7.99        12.92        22.06         1.91        16.96 
TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 
       52.93        18.97         1.02         0.99        38.99         9.01 
TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2926 
       26.04        29.00        39.98        12.03         1.02        14.99 
TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 
        2.93         1.94         4.04         4.01         0.92         1.97 
TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2948 
        1.94         7.07         9.96        14.96        21.07        19.07 
TCGA-AB-2949 TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 
       22.98        10.06         1.02        49.05        16.08         6.02 
TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2964 TCGA-AB-2966 TCGA-AB-2968 TCGA-AB-2970 
       19.99        16.08        41.98        28.08        15.06        10.03 
TCGA-AB-2971 TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2982 
       26.04         0.99        22.98        22.06        22.98         4.90 
TCGA-AB-2983 TCGA-AB-2985 TCGA-AB-2991 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 
       11.01         8.98        60.03        59.11        50.99        51.98 
TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 
        1.02        57.01        41.06        51.98        47.05        69.01 
TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3012 
       15.91        51.98        27.02        18.94        62.04 

  NPM1 MUTATED NPM1 WILD-TYPE 
          0.99           0.92 
  NPM1 MUTATED NPM1 WILD-TYPE 
         61.97          94.06 
  NPM1 MUTATED NPM1 WILD-TYPE 
          9.96          13.94 
[1] "1.0 - 62.0 (10.0)" "0.9 - 94.1 (13.9)"
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
  "NPM1 MUTATED"   "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
  "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
  "NPM1 MUTATED" "NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
  "NPM1 MUTATED" "NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED"   "NPM1 MUTATED" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
  "NPM1 MUTATED" "NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
  "NPM1 MUTATED"   "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
  "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-3012 
"NPM1 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
  "NPM1 MUTATED"   "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
  "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
  "NPM1 MUTATED" "NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
  "NPM1 MUTATED" "NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED"   "NPM1 MUTATED" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
  "NPM1 MUTATED" "NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
  "NPM1 MUTATED"   "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
  "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-3012 
"NPM1 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
  "NPM1 MUTATED"   "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
  "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
  "NPM1 MUTATED" "NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
  "NPM1 MUTATED" "NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED"   "NPM1 MUTATED" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
  "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"NPM1 WILD-TYPE"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
  "NPM1 MUTATED" "NPM1 WILD-TYPE"   "NPM1 MUTATED"   "NPM1 MUTATED" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
  "NPM1 MUTATED"   "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
  "NPM1 MUTATED"   "NPM1 MUTATED" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"NPM1 WILD-TYPE" "NPM1 WILD-TYPE" "NPM1 WILD-TYPE"   "NPM1 MUTATED" 
    TCGA-AB-3012 
"NPM1 WILD-TYPE" 
[1] "hr=" "1.4"
D8V2, continuous
D8V3, binary
                cls
clus              0  1
  NPM1 MUTATED   29 25
  NPM1 WILD-TYPE 62 81
[1] "tbl2"
                cls
clus             [,1] [,2]
  NPM1 MUTATED     29   25
  NPM1 WILD-TYPE   62   81
        clus
vv       NPM1 MUTATED NPM1 WILD-TYPE
  FEMALE           29             62
  MALE             25             81

Clustering(9) Variable = U2AF1 MUTATION ANALYSIS
D9V1, survival
                 sevent
clus2               0   1
  U2AF1 MUTATED     1   6
  U2AF1 WILD-TYPE  64 102
  U2AF1 MUTATED U2AF1 WILD-TYPE 
              7             166 
  U2AF1 MUTATED U2AF1 WILD-TYPE 
              6             102 
$`U2AF1 MUTATED`
TCGA-AB-2821 TCGA-AB-2843 TCGA-AB-2847 TCGA-AB-2882 TCGA-AB-2912 TCGA-AB-2968 
       26.99         7.07        19.96        12.00         9.01        15.06 
TCGA-AB-2996 
       51.98 

$`U2AF1 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
       94.06         2.04         1.02         7.99        12.03         1.02 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2822 
       26.04         8.05         8.98         9.96        82.06        31.96 
TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 
        0.99         6.94        24.03         8.98        75.09         8.98 
TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 
        9.04        21.04        12.00        14.99         8.05        55.00 
TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2844 
       17.00        12.00        15.98         0.92        46.06         3.98 
TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 TCGA-AB-2851 
        9.96        46.09        14.96        72.99         1.97         7.96 
TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 
        2.89        12.03         6.94        10.06        18.94         9.96 
TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2866 
       14.01        47.01         1.02        18.97         2.01         5.00 
TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 
        6.05         4.96         7.99         5.00         5.03        20.98 
TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2878 
        8.98        13.02         6.97        40.08        20.98        12.00 
TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 
        8.05        13.94        12.92        24.00        24.03         7.04 
TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 
        5.95        10.98         9.99        30.97         6.97         5.92 
TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2900 
        5.03         7.00         7.99        12.92        22.06         6.02 
TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2908 TCGA-AB-2909 
        1.91        16.96        52.93        18.97         1.02         0.99 
TCGA-AB-2911 TCGA-AB-2913 TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 
       38.99        39.98        26.04        29.00        39.98         2.01 
TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 
       12.03         1.02         2.96         7.96        14.99         2.93 
TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 
        1.94         4.04         4.01         0.92         1.97         1.94 
TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 
        7.07         9.96        14.96        21.07         7.99         1.02 
TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 
       19.07        22.98        10.06         1.02        49.05        16.08 
TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 
        6.02        19.99        16.08        53.95        41.98        11.01 
TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 
       28.08        34.03        37.05        10.03        26.04         0.99 
TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 
       20.02         3.02        30.08         0.99        22.98        22.06 
TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 
       22.98        16.01         4.90        11.01        38.01         8.98 
TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 
        6.97         6.05         0.99        12.00        15.02        60.03 
TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2998 TCGA-AB-2999 
       56.09        25.02        59.11        50.99         1.02        57.01 
TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 
       41.06        51.98        47.05        69.01        15.91        51.98 
TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       27.02        18.94        61.97        62.04 

  U2AF1 MUTATED U2AF1 WILD-TYPE 
           7.07            0.92 
  U2AF1 MUTATED U2AF1 WILD-TYPE 
          51.98           94.06 
  U2AF1 MUTATED U2AF1 WILD-TYPE 
          15.06           12.03 
[1] "7.1 - 52.0 (15.1)" "0.9 - 94.1 (12.0)"
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"U2AF1 WILD-TYPE"   "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
  "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
  "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
  "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE"   "U2AF1 MUTATED" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"U2AF1 WILD-TYPE"   "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
  "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-3012 
"U2AF1 WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"U2AF1 WILD-TYPE"   "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
  "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
  "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
  "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE"   "U2AF1 MUTATED" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"U2AF1 WILD-TYPE"   "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
  "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-3012 
"U2AF1 WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"U2AF1 WILD-TYPE"   "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
  "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
  "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
  "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE"   "U2AF1 MUTATED" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"U2AF1 WILD-TYPE"   "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
  "U2AF1 MUTATED" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" "U2AF1 WILD-TYPE" 
     TCGA-AB-3012 
"U2AF1 WILD-TYPE" 
[1] "hr=" "1.2"
D9V2, continuous
D9V3, binary
                 cls
clus               0  1
  U2AF1 MUTATED    1  7
  U2AF1 WILD-TYPE 90 99
[1] "tbl2"
                 cls
clus              [,1] [,2]
  U2AF1 MUTATED      1    7
  U2AF1 WILD-TYPE   90   99
        clus
vv       U2AF1 MUTATED U2AF1 WILD-TYPE
  FEMALE             1              90
  MALE               7              99

Clustering(10) Variable = TP53 MUTATION ANALYSIS
D10V1, survival
                sevent
clus2             0  1
  TP53 MUTATED    0 12
  TP53 WILD-TYPE 65 96
  TP53 MUTATED TP53 WILD-TYPE 
            12            161 
  TP53 MUTATED TP53 WILD-TYPE 
            12             96 
$`TP53 MUTATED`
TCGA-AB-2813 TCGA-AB-2829 TCGA-AB-2857 TCGA-AB-2860 TCGA-AB-2868 TCGA-AB-2878 
        1.02         8.98        10.06        14.01         4.96        12.00 
TCGA-AB-2885 TCGA-AB-2904 TCGA-AB-2908 TCGA-AB-2935 TCGA-AB-2938 TCGA-AB-2952 
        7.04        16.96         1.02         1.97         9.96         1.02 

$`TP53 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2814 
       94.06         2.04         1.02         7.99        12.03        26.04 
TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 TCGA-AB-2822 
        8.05         8.98         9.96        82.06        26.99        31.96 
TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2830 
        0.99         6.94        24.03         8.98        75.09         9.04 
TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 
       21.04        12.00        14.99         8.05        55.00        17.00 
TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 TCGA-AB-2844 
       12.00        15.98         0.92        46.06         7.07         3.98 
TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 
        9.96        46.09        19.96        14.96        72.99         1.97 
TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2858 TCGA-AB-2859 
        7.96         2.89        12.03         6.94        18.94         9.96 
TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2867 
       47.01         1.02        18.97         2.01         5.00         6.05 
TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 
        7.99         5.00         5.03        20.98         8.98        13.02 
TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 
        6.97        40.08        20.98         8.05        13.94        12.92 
TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 
       12.00        24.00        24.03         5.95        10.98         9.99 
TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 
       30.97         6.97         5.92         5.03         7.00         7.99 
TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2905 TCGA-AB-2906 
       12.92        22.06         6.02         1.91        52.93        18.97 
TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2914 TCGA-AB-2916 
        0.99        38.99         9.01        39.98        26.04        29.00 
TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 
       39.98         2.01        12.03         1.02         2.96         7.96 
TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 
       14.99         2.93         1.94         4.04         4.01         0.92 
TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 
        1.94         7.07        14.96        21.07         7.99         1.02 
TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 
       19.07        22.98        10.06        49.05        16.08         6.02 
TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 
       19.99        16.08        53.95        41.98        11.01        28.08 
TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 
       34.03        15.06        37.05        10.03        26.04         0.99 
TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 
       20.02         3.02        30.08         0.99        22.98        22.06 
TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 
       22.98        16.01         4.90        11.01        38.01         8.98 
TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 
        6.97         6.05         0.99        12.00        15.02        60.03 
TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2998 
       56.09        25.02        59.11        50.99        51.98         1.02 
TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 
       57.01        41.06        51.98        47.05        69.01        15.91 
TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       51.98        27.02        18.94        61.97        62.04 

  TP53 MUTATED TP53 WILD-TYPE 
          1.02           0.92 
  TP53 MUTATED TP53 WILD-TYPE 
         16.96          94.06 
  TP53 MUTATED TP53 WILD-TYPE 
          8.01          13.02 
[1] "1.0 - 17.0 (8.0)"  "0.9 - 94.1 (13.0)"
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-3012 
"TP53 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-3012 
"TP53 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AB-3012 
"TP53 WILD-TYPE" 
[1] "hr=" "3.7"
D10V2, continuous
D10V3, binary
                cls
clus              0  1
  TP53 MUTATED    4 11
  TP53 WILD-TYPE 87 95
[1] "tbl2"
                cls
clus             [,1] [,2]
  TP53 MUTATED      4   11
  TP53 WILD-TYPE   87   95
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  FEMALE            4             87
  MALE             11             95

Clustering(11) Variable = KRAS MUTATION ANALYSIS
D11V1, survival
                sevent
clus2              0   1
  KRAS MUTATED     1   6
  KRAS WILD-TYPE  64 102
  KRAS MUTATED KRAS WILD-TYPE 
             7            166 
  KRAS MUTATED KRAS WILD-TYPE 
             6            102 
$`KRAS MUTATED`
TCGA-AB-2826 TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2917 TCGA-AB-2929 TCGA-AB-2966 
       24.03        18.97         2.01        39.98         4.04        28.08 
TCGA-AB-2987 
        6.05 

$`KRAS WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
       94.06         2.04         1.02         7.99        12.03         1.02 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 
       26.04         8.05         8.98         9.96        82.06        26.99 
TCGA-AB-2822 TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 
       31.96         0.99         6.94         8.98        75.09         8.98 
TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 
        9.04        21.04        12.00        14.99         8.05        55.00 
TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 
       17.00        12.00        15.98         0.92        46.06         7.07 
TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 
        3.98         9.96        46.09        19.96        14.96        72.99 
TCGA-AB-2850 TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 
        1.97         7.96         2.89        12.03         6.94        10.06 
TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2866 
       18.94         9.96        14.01        47.01         1.02         5.00 
TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 
        6.05         4.96         7.99         5.00         5.03        20.98 
TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2878 
        8.98        13.02         6.97        40.08        20.98        12.00 
TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2884 
        8.05        13.94        12.92        12.00        24.00        24.03 
TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 
        7.04         5.95        10.98         9.99        30.97         6.97 
TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 
        5.92         5.03         7.00         7.99        12.92        22.06 
TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2908 
        6.02         1.91        16.96        52.93        18.97         1.02 
TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2914 TCGA-AB-2916 
        0.99        38.99         9.01        39.98        26.04        29.00 
TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 
        2.01        12.03         1.02         2.96         7.96        14.99 
TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 
        2.93         1.94         4.01         0.92         1.97         1.94 
TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 
        7.07         9.96        14.96        21.07         7.99         1.02 
TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 
       19.07        22.98        10.06         1.02        49.05        16.08 
TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 
        6.02        19.99        16.08        53.95        41.98        11.01 
TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 
       34.03        15.06        37.05        10.03        26.04         0.99 
TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 
       20.02         3.02        30.08         0.99        22.98        22.06 
TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 
       22.98        16.01         4.90        11.01        38.01         8.98 
TCGA-AB-2986 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 
        6.97         0.99        12.00        15.02        60.03        56.09 
TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 
       25.02        59.11        50.99        51.98         1.02        57.01 
TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 
       41.06        51.98        47.05        69.01        15.91        51.98 
TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       27.02        18.94        61.97        62.04 

  KRAS MUTATED KRAS WILD-TYPE 
          2.01           0.92 
  KRAS MUTATED KRAS WILD-TYPE 
         39.98          94.06 
  KRAS MUTATED KRAS WILD-TYPE 
         18.97          12.03 
[1] "2.0 - 40.0 (19.0)" "0.9 - 94.1 (12.0)"
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"KRAS WILD-TYPE"   "KRAS MUTATED" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"KRAS WILD-TYPE" "KRAS WILD-TYPE"   "KRAS MUTATED"   "KRAS MUTATED" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE"   "KRAS MUTATED" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
  "KRAS MUTATED" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE"   "KRAS MUTATED" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE"   "KRAS MUTATED" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-3012 
"KRAS WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"KRAS WILD-TYPE"   "KRAS MUTATED" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"KRAS WILD-TYPE" "KRAS WILD-TYPE"   "KRAS MUTATED"   "KRAS MUTATED" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE"   "KRAS MUTATED" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
  "KRAS MUTATED" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE"   "KRAS MUTATED" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE"   "KRAS MUTATED" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-3012 
"KRAS WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"KRAS WILD-TYPE"   "KRAS MUTATED" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"KRAS WILD-TYPE" "KRAS WILD-TYPE"   "KRAS MUTATED"   "KRAS MUTATED" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE"   "KRAS MUTATED" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
  "KRAS MUTATED" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE"   "KRAS MUTATED" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE"   "KRAS MUTATED" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-AB-3012 
"KRAS WILD-TYPE" 
[1] "hr=" "1.4"
D11V2, continuous
D11V3, binary
                cls
clus               0   1
  KRAS MUTATED     6   2
  KRAS WILD-TYPE  85 104
[1] "tbl2"
                cls
clus             [,1] [,2]
  KRAS MUTATED      6    2
  KRAS WILD-TYPE   85  104
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  FEMALE            6             85
  MALE              2            104

Clustering(12) Variable = PTPN11 MUTATION ANALYSIS
D12V1, survival
                  sevent
clus2                0   1
  PTPN11 MUTATED     2   7
  PTPN11 WILD-TYPE  63 101
  PTPN11 MUTATED PTPN11 WILD-TYPE 
               9              164 
  PTPN11 MUTATED PTPN11 WILD-TYPE 
               7              101 
$`PTPN11 MUTATED`
TCGA-AB-2802 TCGA-AB-2839 TCGA-AB-2855 TCGA-AB-2871 TCGA-AB-2884 TCGA-AB-2885 
       12.00        15.98         6.94         5.03        24.03         7.04 
TCGA-AB-2914 TCGA-AB-2963 TCGA-AB-2972 
       26.04        53.95         0.99 

$`PTPN11 WILD-TYPE`
TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 TCGA-AB-2808 
       26.04        84.03        18.94        31.04         5.92        94.06 
TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 TCGA-AB-2814 
        2.04         1.02         7.99        12.03         1.02        26.04 
TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 TCGA-AB-2822 
        8.05         8.98         9.96        82.06        26.99        31.96 
TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 
        0.99         6.94        24.03         8.98        75.09         8.98 
TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 
        9.04        21.04        12.00        14.99         8.05        55.00 
TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 TCGA-AB-2844 
       17.00        12.00         0.92        46.06         7.07         3.98 
TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 
        9.96        46.09        19.96        14.96        72.99         1.97 
TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 
        7.96         2.89        12.03        10.06        18.94         9.96 
TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2866 
       14.01        47.01         1.02        18.97         2.01         5.00 
TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2872 TCGA-AB-2873 
        6.05         4.96         7.99         5.00        20.98         8.98 
TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2878 TCGA-AB-2879 
       13.02         6.97        40.08        20.98        12.00         8.05 
TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2886 TCGA-AB-2888 
       13.94        12.92        12.00        24.00         5.95        10.98 
TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 
        9.99        30.97         6.97         5.92         5.03         7.00 
TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 
        7.99        12.92        22.06         6.02         1.91        16.96 
TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 
       52.93        18.97         1.02         0.99        38.99         9.01 
TCGA-AB-2913 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 
       39.98        29.00        39.98         2.01        12.03         1.02 
TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 
        2.96         7.96        14.99         2.93         1.94         4.04 
TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 
        4.01         0.92         1.97         1.94         7.07         9.96 
TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 
       14.96        21.07         7.99         1.02        19.07        22.98 
TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 
       10.06         1.02        49.05        16.08         6.02        19.99 
TCGA-AB-2959 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 
       16.08        41.98        11.01        28.08        34.03        15.06 
TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2976 
       37.05        10.03        26.04        20.02         3.02        30.08 
TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 
        0.99        22.98        22.06        22.98        16.01         4.90 
TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 
       11.01        38.01         8.98         6.97         6.05         0.99 
TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 
       12.00        15.02        60.03        56.09        25.02        59.11 
TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 
       50.99        51.98         1.02        57.01        41.06        51.98 
TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 
       47.05        69.01        15.91        51.98        27.02        18.94 
TCGA-AB-3011 TCGA-AB-3012 
       61.97        62.04 

  PTPN11 MUTATED PTPN11 WILD-TYPE 
            0.99             0.92 
  PTPN11 MUTATED PTPN11 WILD-TYPE 
           53.95            94.06 
  PTPN11 MUTATED PTPN11 WILD-TYPE 
           12.00            12.03 
[1] "1.0 - 54.0 (12.0)" "0.9 - 94.1 (12.0)"
      TCGA-AB-2802       TCGA-AB-2803       TCGA-AB-2804       TCGA-AB-2805 
  "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2806       TCGA-AB-2807       TCGA-AB-2808       TCGA-AB-2809 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2810       TCGA-AB-2811       TCGA-AB-2812       TCGA-AB-2813 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2814       TCGA-AB-2816       TCGA-AB-2817       TCGA-AB-2818 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2819       TCGA-AB-2821       TCGA-AB-2822       TCGA-AB-2824 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2825       TCGA-AB-2826       TCGA-AB-2827       TCGA-AB-2828 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2829       TCGA-AB-2830       TCGA-AB-2831       TCGA-AB-2832 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2833       TCGA-AB-2834       TCGA-AB-2835       TCGA-AB-2836 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2838       TCGA-AB-2839       TCGA-AB-2840       TCGA-AB-2841 
"PTPN11 WILD-TYPE"   "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2843       TCGA-AB-2844       TCGA-AB-2845       TCGA-AB-2846 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2847       TCGA-AB-2848       TCGA-AB-2849       TCGA-AB-2850 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2851       TCGA-AB-2853       TCGA-AB-2854       TCGA-AB-2855 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE"   "PTPN11 MUTATED" 
      TCGA-AB-2857       TCGA-AB-2858       TCGA-AB-2859       TCGA-AB-2860 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2862       TCGA-AB-2863       TCGA-AB-2864       TCGA-AB-2865 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2866       TCGA-AB-2867       TCGA-AB-2868       TCGA-AB-2869 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2870       TCGA-AB-2871       TCGA-AB-2872       TCGA-AB-2873 
"PTPN11 WILD-TYPE"   "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2874       TCGA-AB-2875       TCGA-AB-2876       TCGA-AB-2877 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2878       TCGA-AB-2879       TCGA-AB-2880       TCGA-AB-2881 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2882       TCGA-AB-2883       TCGA-AB-2884       TCGA-AB-2885 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE"   "PTPN11 MUTATED"   "PTPN11 MUTATED" 
      TCGA-AB-2886       TCGA-AB-2888       TCGA-AB-2889       TCGA-AB-2892 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2893       TCGA-AB-2894       TCGA-AB-2895       TCGA-AB-2896 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2897       TCGA-AB-2898       TCGA-AB-2899       TCGA-AB-2900 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2901       TCGA-AB-2904       TCGA-AB-2905       TCGA-AB-2906 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2908       TCGA-AB-2909       TCGA-AB-2911       TCGA-AB-2912 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2913       TCGA-AB-2914       TCGA-AB-2916       TCGA-AB-2917 
"PTPN11 WILD-TYPE"   "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2919       TCGA-AB-2920       TCGA-AB-2923       TCGA-AB-2924 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2925       TCGA-AB-2926       TCGA-AB-2927       TCGA-AB-2928 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2929       TCGA-AB-2933       TCGA-AB-2934       TCGA-AB-2935 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2936       TCGA-AB-2937       TCGA-AB-2938       TCGA-AB-2939 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2942       TCGA-AB-2945       TCGA-AB-2947       TCGA-AB-2948 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2949       TCGA-AB-2950       TCGA-AB-2952       TCGA-AB-2954 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2955       TCGA-AB-2956       TCGA-AB-2957       TCGA-AB-2959 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2963       TCGA-AB-2964       TCGA-AB-2965       TCGA-AB-2966 
  "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2967       TCGA-AB-2968       TCGA-AB-2969       TCGA-AB-2970 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2971       TCGA-AB-2972       TCGA-AB-2973       TCGA-AB-2974 
"PTPN11 WILD-TYPE"   "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2976       TCGA-AB-2977       TCGA-AB-2978       TCGA-AB-2979 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2980       TCGA-AB-2981       TCGA-AB-2982       TCGA-AB-2983 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2984       TCGA-AB-2985       TCGA-AB-2986       TCGA-AB-2987 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2988       TCGA-AB-2989       TCGA-AB-2990       TCGA-AB-2991 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2992       TCGA-AB-2993       TCGA-AB-2994       TCGA-AB-2995 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2996       TCGA-AB-2998       TCGA-AB-2999       TCGA-AB-3000 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-3001       TCGA-AB-3002       TCGA-AB-3005       TCGA-AB-3006 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-3007       TCGA-AB-3008       TCGA-AB-3009       TCGA-AB-3011 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-3012 
"PTPN11 WILD-TYPE" 
      TCGA-AB-2802       TCGA-AB-2803       TCGA-AB-2804       TCGA-AB-2805 
  "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2806       TCGA-AB-2807       TCGA-AB-2808       TCGA-AB-2809 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2810       TCGA-AB-2811       TCGA-AB-2812       TCGA-AB-2813 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2814       TCGA-AB-2816       TCGA-AB-2817       TCGA-AB-2818 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2819       TCGA-AB-2821       TCGA-AB-2822       TCGA-AB-2824 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2825       TCGA-AB-2826       TCGA-AB-2827       TCGA-AB-2828 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2829       TCGA-AB-2830       TCGA-AB-2831       TCGA-AB-2832 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2833       TCGA-AB-2834       TCGA-AB-2835       TCGA-AB-2836 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2838       TCGA-AB-2839       TCGA-AB-2840       TCGA-AB-2841 
"PTPN11 WILD-TYPE"   "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2843       TCGA-AB-2844       TCGA-AB-2845       TCGA-AB-2846 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2847       TCGA-AB-2848       TCGA-AB-2849       TCGA-AB-2850 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2851       TCGA-AB-2853       TCGA-AB-2854       TCGA-AB-2855 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE"   "PTPN11 MUTATED" 
      TCGA-AB-2857       TCGA-AB-2858       TCGA-AB-2859       TCGA-AB-2860 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2862       TCGA-AB-2863       TCGA-AB-2864       TCGA-AB-2865 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2866       TCGA-AB-2867       TCGA-AB-2868       TCGA-AB-2869 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2870       TCGA-AB-2871       TCGA-AB-2872       TCGA-AB-2873 
"PTPN11 WILD-TYPE"   "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2874       TCGA-AB-2875       TCGA-AB-2876       TCGA-AB-2877 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2878       TCGA-AB-2879       TCGA-AB-2880       TCGA-AB-2881 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2882       TCGA-AB-2883       TCGA-AB-2884       TCGA-AB-2885 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE"   "PTPN11 MUTATED"   "PTPN11 MUTATED" 
      TCGA-AB-2886       TCGA-AB-2888       TCGA-AB-2889       TCGA-AB-2892 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2893       TCGA-AB-2894       TCGA-AB-2895       TCGA-AB-2896 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2897       TCGA-AB-2898       TCGA-AB-2899       TCGA-AB-2900 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2901       TCGA-AB-2904       TCGA-AB-2905       TCGA-AB-2906 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2908       TCGA-AB-2909       TCGA-AB-2911       TCGA-AB-2912 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2913       TCGA-AB-2914       TCGA-AB-2916       TCGA-AB-2917 
"PTPN11 WILD-TYPE"   "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2919       TCGA-AB-2920       TCGA-AB-2923       TCGA-AB-2924 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2925       TCGA-AB-2926       TCGA-AB-2927       TCGA-AB-2928 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2929       TCGA-AB-2933       TCGA-AB-2934       TCGA-AB-2935 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2936       TCGA-AB-2937       TCGA-AB-2938       TCGA-AB-2939 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2942       TCGA-AB-2945       TCGA-AB-2947       TCGA-AB-2948 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2949       TCGA-AB-2950       TCGA-AB-2952       TCGA-AB-2954 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2955       TCGA-AB-2956       TCGA-AB-2957       TCGA-AB-2959 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2963       TCGA-AB-2964       TCGA-AB-2965       TCGA-AB-2966 
  "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2967       TCGA-AB-2968       TCGA-AB-2969       TCGA-AB-2970 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2971       TCGA-AB-2972       TCGA-AB-2973       TCGA-AB-2974 
"PTPN11 WILD-TYPE"   "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2976       TCGA-AB-2977       TCGA-AB-2978       TCGA-AB-2979 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2980       TCGA-AB-2981       TCGA-AB-2982       TCGA-AB-2983 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2984       TCGA-AB-2985       TCGA-AB-2986       TCGA-AB-2987 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2988       TCGA-AB-2989       TCGA-AB-2990       TCGA-AB-2991 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2992       TCGA-AB-2993       TCGA-AB-2994       TCGA-AB-2995 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2996       TCGA-AB-2998       TCGA-AB-2999       TCGA-AB-3000 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-3001       TCGA-AB-3002       TCGA-AB-3005       TCGA-AB-3006 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-3007       TCGA-AB-3008       TCGA-AB-3009       TCGA-AB-3011 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-3012 
"PTPN11 WILD-TYPE" 
      TCGA-AB-2802       TCGA-AB-2803       TCGA-AB-2804       TCGA-AB-2805 
  "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2806       TCGA-AB-2807       TCGA-AB-2808       TCGA-AB-2809 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2810       TCGA-AB-2811       TCGA-AB-2812       TCGA-AB-2813 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2814       TCGA-AB-2816       TCGA-AB-2817       TCGA-AB-2818 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2819       TCGA-AB-2821       TCGA-AB-2822       TCGA-AB-2824 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2825       TCGA-AB-2826       TCGA-AB-2827       TCGA-AB-2828 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2829       TCGA-AB-2830       TCGA-AB-2831       TCGA-AB-2832 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2833       TCGA-AB-2834       TCGA-AB-2835       TCGA-AB-2836 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2838       TCGA-AB-2839       TCGA-AB-2840       TCGA-AB-2841 
"PTPN11 WILD-TYPE"   "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2843       TCGA-AB-2844       TCGA-AB-2845       TCGA-AB-2846 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2847       TCGA-AB-2848       TCGA-AB-2849       TCGA-AB-2850 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2851       TCGA-AB-2853       TCGA-AB-2854       TCGA-AB-2855 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE"   "PTPN11 MUTATED" 
      TCGA-AB-2857       TCGA-AB-2858       TCGA-AB-2859       TCGA-AB-2860 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2862       TCGA-AB-2863       TCGA-AB-2864       TCGA-AB-2865 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2866       TCGA-AB-2867       TCGA-AB-2868       TCGA-AB-2869 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2870       TCGA-AB-2871       TCGA-AB-2872       TCGA-AB-2873 
"PTPN11 WILD-TYPE"   "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2874       TCGA-AB-2875       TCGA-AB-2876       TCGA-AB-2877 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2878       TCGA-AB-2879       TCGA-AB-2880       TCGA-AB-2881 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2882       TCGA-AB-2883       TCGA-AB-2884       TCGA-AB-2885 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE"   "PTPN11 MUTATED"   "PTPN11 MUTATED" 
      TCGA-AB-2886       TCGA-AB-2888       TCGA-AB-2889       TCGA-AB-2892 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2893       TCGA-AB-2894       TCGA-AB-2895       TCGA-AB-2896 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2897       TCGA-AB-2898       TCGA-AB-2899       TCGA-AB-2900 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2901       TCGA-AB-2904       TCGA-AB-2905       TCGA-AB-2906 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2908       TCGA-AB-2909       TCGA-AB-2911       TCGA-AB-2912 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2913       TCGA-AB-2914       TCGA-AB-2916       TCGA-AB-2917 
"PTPN11 WILD-TYPE"   "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2919       TCGA-AB-2920       TCGA-AB-2923       TCGA-AB-2924 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2925       TCGA-AB-2926       TCGA-AB-2927       TCGA-AB-2928 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2929       TCGA-AB-2933       TCGA-AB-2934       TCGA-AB-2935 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2936       TCGA-AB-2937       TCGA-AB-2938       TCGA-AB-2939 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2942       TCGA-AB-2945       TCGA-AB-2947       TCGA-AB-2948 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2949       TCGA-AB-2950       TCGA-AB-2952       TCGA-AB-2954 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2955       TCGA-AB-2956       TCGA-AB-2957       TCGA-AB-2959 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2963       TCGA-AB-2964       TCGA-AB-2965       TCGA-AB-2966 
  "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2967       TCGA-AB-2968       TCGA-AB-2969       TCGA-AB-2970 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2971       TCGA-AB-2972       TCGA-AB-2973       TCGA-AB-2974 
"PTPN11 WILD-TYPE"   "PTPN11 MUTATED" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2976       TCGA-AB-2977       TCGA-AB-2978       TCGA-AB-2979 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2980       TCGA-AB-2981       TCGA-AB-2982       TCGA-AB-2983 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2984       TCGA-AB-2985       TCGA-AB-2986       TCGA-AB-2987 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2988       TCGA-AB-2989       TCGA-AB-2990       TCGA-AB-2991 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2992       TCGA-AB-2993       TCGA-AB-2994       TCGA-AB-2995 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-2996       TCGA-AB-2998       TCGA-AB-2999       TCGA-AB-3000 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-3001       TCGA-AB-3002       TCGA-AB-3005       TCGA-AB-3006 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-3007       TCGA-AB-3008       TCGA-AB-3009       TCGA-AB-3011 
"PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" "PTPN11 WILD-TYPE" 
      TCGA-AB-3012 
"PTPN11 WILD-TYPE" 
[1] "hr=" "1.4"
D12V2, continuous
D12V3, binary
                  cls
clus                 0   1
  PTPN11 MUTATED     4   5
  PTPN11 WILD-TYPE  87 101
[1] "tbl2"
                  cls
clus               [,1] [,2]
  PTPN11 MUTATED      4    5
  PTPN11 WILD-TYPE   87  101
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  FEMALE              4               87
  MALE                5              101

Clustering(13) Variable = TET2 MUTATION ANALYSIS
D13V1, survival
                sevent
clus2             0  1
  TET2 MUTATED    6 11
  TET2 WILD-TYPE 59 97
  TET2 MUTATED TET2 WILD-TYPE 
            17            156 
  TET2 MUTATED TET2 WILD-TYPE 
            11             97 
$`TET2 MUTATED`
TCGA-AB-2822 TCGA-AB-2830 TCGA-AB-2845 TCGA-AB-2865 TCGA-AB-2873 TCGA-AB-2876 
       31.96         9.04         9.96         2.01         8.98        40.08 
TCGA-AB-2879 TCGA-AB-2908 TCGA-AB-2923 TCGA-AB-2928 TCGA-AB-2937 TCGA-AB-2964 
        8.05         1.02         1.02         1.94         7.07        41.98 
TCGA-AB-2965 TCGA-AB-2971 TCGA-AB-2978 TCGA-AB-2996 TCGA-AB-3006 
       11.01        26.04        22.98        51.98        15.91 

$`TET2 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
       94.06         2.04         1.02         7.99        12.03         1.02 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 
       26.04         8.05         8.98         9.96        82.06        26.99 
TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 
        0.99         6.94        24.03         8.98        75.09         8.98 
TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 
       21.04        12.00        14.99         8.05        55.00        17.00 
TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 TCGA-AB-2844 
       12.00        15.98         0.92        46.06         7.07         3.98 
TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 TCGA-AB-2851 
       46.09        19.96        14.96        72.99         1.97         7.96 
TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 
        2.89        12.03         6.94        10.06        18.94         9.96 
TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2866 TCGA-AB-2867 
       14.01        47.01         1.02        18.97         5.00         6.05 
TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2874 
        4.96         7.99         5.00         5.03        20.98        13.02 
TCGA-AB-2875 TCGA-AB-2877 TCGA-AB-2878 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 
        6.97        20.98        12.00        13.94        12.92        12.00 
TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 
       24.00        24.03         7.04         5.95        10.98         9.99 
TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 
       30.97         6.97         5.92         5.03         7.00         7.99 
TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 
       12.92        22.06         6.02         1.91        16.96        52.93 
TCGA-AB-2906 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2914 
       18.97         0.99        38.99         9.01        39.98        26.04 
TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2924 TCGA-AB-2925 
       29.00        39.98         2.01        12.03         2.96         7.96 
TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 
       14.99         2.93         4.04         4.01         0.92         1.97 
TCGA-AB-2936 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 
        1.94         9.96        14.96        21.07         7.99         1.02 
TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 
       19.07        22.98        10.06         1.02        49.05        16.08 
TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2963 TCGA-AB-2966 TCGA-AB-2967 
        6.02        19.99        16.08        53.95        28.08        34.03 
TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 
       15.06        37.05        10.03         0.99        20.02         3.02 
TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 
       30.08         0.99        22.06        22.98        16.01         4.90 
TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 
       11.01        38.01         8.98         6.97         6.05         0.99 
TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 
       12.00        15.02        60.03        56.09        25.02        59.11 
TCGA-AB-2995 TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 
       50.99         1.02        57.01        41.06        51.98        47.05 
TCGA-AB-3005 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       69.01        51.98        27.02        18.94        61.97        62.04 

  TET2 MUTATED TET2 WILD-TYPE 
          1.02           0.92 
  TET2 MUTATED TET2 WILD-TYPE 
         51.98          94.06 
  TET2 MUTATED TET2 WILD-TYPE 
         9.960         12.475 
[1] "1.0 - 52.0 (10.0)" "0.9 - 94.1 (12.5)"
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
  "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"TET2 WILD-TYPE"   "TET2 MUTATED"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
  "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
  "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-3012 
"TET2 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
  "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"TET2 WILD-TYPE"   "TET2 MUTATED"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
  "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
  "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-3012 
"TET2 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
  "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"TET2 WILD-TYPE"   "TET2 MUTATED"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
  "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" "TET2 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
  "TET2 MUTATED" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE"   "TET2 MUTATED" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" "TET2 WILD-TYPE" 
    TCGA-AB-3012 
"TET2 WILD-TYPE" 
[1] "hr=" "1.1"
D13V2, continuous
D13V3, binary
                cls
clus              0  1
  TET2 MUTATED   10  7
  TET2 WILD-TYPE 81 99
[1] "tbl2"
                cls
clus             [,1] [,2]
  TET2 MUTATED     10    7
  TET2 WILD-TYPE   81   99
        clus
vv       TET2 MUTATED TET2 WILD-TYPE
  FEMALE           10             81
  MALE              7             99

Clustering(14) Variable = KIT MUTATION ANALYSIS
D14V1, survival
               sevent
clus2             0   1
  KIT MUTATED     4   4
  KIT WILD-TYPE  61 104
  KIT MUTATED KIT WILD-TYPE 
            8           165 
  KIT MUTATED KIT WILD-TYPE 
            4           104 
$`KIT MUTATED`
TCGA-AB-2819 TCGA-AB-2843 TCGA-AB-2846 TCGA-AB-2881 TCGA-AB-2888 TCGA-AB-2937 
       82.06         7.07        46.09        12.92        10.98         7.07 
TCGA-AB-2939 TCGA-AB-2945 
       14.96         7.99 

$`KIT WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
       94.06         2.04         1.02         7.99        12.03         1.02 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2821 TCGA-AB-2822 
       26.04         8.05         8.98         9.96        26.99        31.96 
TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 
        0.99         6.94        24.03         8.98        75.09         8.98 
TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 
        9.04        21.04        12.00        14.99         8.05        55.00 
TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2844 
       17.00        12.00        15.98         0.92        46.06         3.98 
TCGA-AB-2845 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 TCGA-AB-2851 
        9.96        19.96        14.96        72.99         1.97         7.96 
TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 
        2.89        12.03         6.94        10.06        18.94         9.96 
TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2866 
       14.01        47.01         1.02        18.97         2.01         5.00 
TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 
        6.05         4.96         7.99         5.00         5.03        20.98 
TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2878 
        8.98        13.02         6.97        40.08        20.98        12.00 
TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 
        8.05        13.94        12.00        24.00        24.03         7.04 
TCGA-AB-2886 TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 
        5.95         9.99        30.97         6.97         5.92         5.03 
TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 
        7.00         7.99        12.92        22.06         6.02         1.91 
TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 
       16.96        52.93        18.97         1.02         0.99        38.99 
TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 
        9.01        39.98        26.04        29.00        39.98         2.01 
TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 
       12.03         1.02         2.96         7.96        14.99         2.93 
TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 
        1.94         4.04         4.01         0.92         1.97         1.94 
TCGA-AB-2938 TCGA-AB-2942 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 
        9.96        21.07         1.02        19.07        22.98        10.06 
TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 
        1.02        49.05        16.08         6.02        19.99        16.08 
TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 
       53.95        41.98        11.01        28.08        34.03        15.06 
TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 
       37.05        10.03        26.04         0.99        20.02         3.02 
TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 
       30.08         0.99        22.98        22.06        22.98        16.01 
TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 
        4.90        11.01        38.01         8.98         6.97         6.05 
TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 
        0.99        12.00        15.02        60.03        56.09        25.02 
TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 
       59.11        50.99        51.98         1.02        57.01        41.06 
TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 
       51.98        47.05        69.01        15.91        51.98        27.02 
TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       18.94        61.97        62.04 

  KIT MUTATED KIT WILD-TYPE 
         7.07          0.92 
  KIT MUTATED KIT WILD-TYPE 
        82.06         94.06 
  KIT MUTATED KIT WILD-TYPE 
        11.95         12.03 
[1] "7.1 - 82.1 (11.9)" "0.9 - 94.1 (12.0)"
   TCGA-AB-2802    TCGA-AB-2803    TCGA-AB-2804    TCGA-AB-2805    TCGA-AB-2806 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2807    TCGA-AB-2808    TCGA-AB-2809    TCGA-AB-2810    TCGA-AB-2811 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2812    TCGA-AB-2813    TCGA-AB-2814    TCGA-AB-2816    TCGA-AB-2817 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2818    TCGA-AB-2819    TCGA-AB-2821    TCGA-AB-2822    TCGA-AB-2824 
"KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2825    TCGA-AB-2826    TCGA-AB-2827    TCGA-AB-2828    TCGA-AB-2829 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2830    TCGA-AB-2831    TCGA-AB-2832    TCGA-AB-2833    TCGA-AB-2834 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2835    TCGA-AB-2836    TCGA-AB-2838    TCGA-AB-2839    TCGA-AB-2840 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2841    TCGA-AB-2843    TCGA-AB-2844    TCGA-AB-2845    TCGA-AB-2846 
"KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE"   "KIT MUTATED" 
   TCGA-AB-2847    TCGA-AB-2848    TCGA-AB-2849    TCGA-AB-2850    TCGA-AB-2851 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2853    TCGA-AB-2854    TCGA-AB-2855    TCGA-AB-2857    TCGA-AB-2858 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2859    TCGA-AB-2860    TCGA-AB-2862    TCGA-AB-2863    TCGA-AB-2864 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2865    TCGA-AB-2866    TCGA-AB-2867    TCGA-AB-2868    TCGA-AB-2869 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2870    TCGA-AB-2871    TCGA-AB-2872    TCGA-AB-2873    TCGA-AB-2874 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2875    TCGA-AB-2876    TCGA-AB-2877    TCGA-AB-2878    TCGA-AB-2879 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2880    TCGA-AB-2881    TCGA-AB-2882    TCGA-AB-2883    TCGA-AB-2884 
"KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2885    TCGA-AB-2886    TCGA-AB-2888    TCGA-AB-2889    TCGA-AB-2892 
"KIT WILD-TYPE" "KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2893    TCGA-AB-2894    TCGA-AB-2895    TCGA-AB-2896    TCGA-AB-2897 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2898    TCGA-AB-2899    TCGA-AB-2900    TCGA-AB-2901    TCGA-AB-2904 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2905    TCGA-AB-2906    TCGA-AB-2908    TCGA-AB-2909    TCGA-AB-2911 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2912    TCGA-AB-2913    TCGA-AB-2914    TCGA-AB-2916    TCGA-AB-2917 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2919    TCGA-AB-2920    TCGA-AB-2923    TCGA-AB-2924    TCGA-AB-2925 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2926    TCGA-AB-2927    TCGA-AB-2928    TCGA-AB-2929    TCGA-AB-2933 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2934    TCGA-AB-2935    TCGA-AB-2936    TCGA-AB-2937    TCGA-AB-2938 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" 
   TCGA-AB-2939    TCGA-AB-2942    TCGA-AB-2945    TCGA-AB-2947    TCGA-AB-2948 
  "KIT MUTATED" "KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2949    TCGA-AB-2950    TCGA-AB-2952    TCGA-AB-2954    TCGA-AB-2955 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2956    TCGA-AB-2957    TCGA-AB-2959    TCGA-AB-2963    TCGA-AB-2964 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2965    TCGA-AB-2966    TCGA-AB-2967    TCGA-AB-2968    TCGA-AB-2969 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2970    TCGA-AB-2971    TCGA-AB-2972    TCGA-AB-2973    TCGA-AB-2974 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2976    TCGA-AB-2977    TCGA-AB-2978    TCGA-AB-2979    TCGA-AB-2980 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2981    TCGA-AB-2982    TCGA-AB-2983    TCGA-AB-2984    TCGA-AB-2985 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2986    TCGA-AB-2987    TCGA-AB-2988    TCGA-AB-2989    TCGA-AB-2990 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2991    TCGA-AB-2992    TCGA-AB-2993    TCGA-AB-2994    TCGA-AB-2995 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2996    TCGA-AB-2998    TCGA-AB-2999    TCGA-AB-3000    TCGA-AB-3001 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-3002    TCGA-AB-3005    TCGA-AB-3006    TCGA-AB-3007    TCGA-AB-3008 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-3009    TCGA-AB-3011    TCGA-AB-3012 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2802    TCGA-AB-2803    TCGA-AB-2804    TCGA-AB-2805    TCGA-AB-2806 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2807    TCGA-AB-2808    TCGA-AB-2809    TCGA-AB-2810    TCGA-AB-2811 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2812    TCGA-AB-2813    TCGA-AB-2814    TCGA-AB-2816    TCGA-AB-2817 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2818    TCGA-AB-2819    TCGA-AB-2821    TCGA-AB-2822    TCGA-AB-2824 
"KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2825    TCGA-AB-2826    TCGA-AB-2827    TCGA-AB-2828    TCGA-AB-2829 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2830    TCGA-AB-2831    TCGA-AB-2832    TCGA-AB-2833    TCGA-AB-2834 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2835    TCGA-AB-2836    TCGA-AB-2838    TCGA-AB-2839    TCGA-AB-2840 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2841    TCGA-AB-2843    TCGA-AB-2844    TCGA-AB-2845    TCGA-AB-2846 
"KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE"   "KIT MUTATED" 
   TCGA-AB-2847    TCGA-AB-2848    TCGA-AB-2849    TCGA-AB-2850    TCGA-AB-2851 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2853    TCGA-AB-2854    TCGA-AB-2855    TCGA-AB-2857    TCGA-AB-2858 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2859    TCGA-AB-2860    TCGA-AB-2862    TCGA-AB-2863    TCGA-AB-2864 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2865    TCGA-AB-2866    TCGA-AB-2867    TCGA-AB-2868    TCGA-AB-2869 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2870    TCGA-AB-2871    TCGA-AB-2872    TCGA-AB-2873    TCGA-AB-2874 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2875    TCGA-AB-2876    TCGA-AB-2877    TCGA-AB-2878    TCGA-AB-2879 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2880    TCGA-AB-2881    TCGA-AB-2882    TCGA-AB-2883    TCGA-AB-2884 
"KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2885    TCGA-AB-2886    TCGA-AB-2888    TCGA-AB-2889    TCGA-AB-2892 
"KIT WILD-TYPE" "KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2893    TCGA-AB-2894    TCGA-AB-2895    TCGA-AB-2896    TCGA-AB-2897 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2898    TCGA-AB-2899    TCGA-AB-2900    TCGA-AB-2901    TCGA-AB-2904 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2905    TCGA-AB-2906    TCGA-AB-2908    TCGA-AB-2909    TCGA-AB-2911 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2912    TCGA-AB-2913    TCGA-AB-2914    TCGA-AB-2916    TCGA-AB-2917 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2919    TCGA-AB-2920    TCGA-AB-2923    TCGA-AB-2924    TCGA-AB-2925 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2926    TCGA-AB-2927    TCGA-AB-2928    TCGA-AB-2929    TCGA-AB-2933 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2934    TCGA-AB-2935    TCGA-AB-2936    TCGA-AB-2937    TCGA-AB-2938 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" 
   TCGA-AB-2939    TCGA-AB-2942    TCGA-AB-2945    TCGA-AB-2947    TCGA-AB-2948 
  "KIT MUTATED" "KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2949    TCGA-AB-2950    TCGA-AB-2952    TCGA-AB-2954    TCGA-AB-2955 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2956    TCGA-AB-2957    TCGA-AB-2959    TCGA-AB-2963    TCGA-AB-2964 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2965    TCGA-AB-2966    TCGA-AB-2967    TCGA-AB-2968    TCGA-AB-2969 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2970    TCGA-AB-2971    TCGA-AB-2972    TCGA-AB-2973    TCGA-AB-2974 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2976    TCGA-AB-2977    TCGA-AB-2978    TCGA-AB-2979    TCGA-AB-2980 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2981    TCGA-AB-2982    TCGA-AB-2983    TCGA-AB-2984    TCGA-AB-2985 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2986    TCGA-AB-2987    TCGA-AB-2988    TCGA-AB-2989    TCGA-AB-2990 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2991    TCGA-AB-2992    TCGA-AB-2993    TCGA-AB-2994    TCGA-AB-2995 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2996    TCGA-AB-2998    TCGA-AB-2999    TCGA-AB-3000    TCGA-AB-3001 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-3002    TCGA-AB-3005    TCGA-AB-3006    TCGA-AB-3007    TCGA-AB-3008 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-3009    TCGA-AB-3011    TCGA-AB-3012 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2802    TCGA-AB-2803    TCGA-AB-2804    TCGA-AB-2805    TCGA-AB-2806 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2807    TCGA-AB-2808    TCGA-AB-2809    TCGA-AB-2810    TCGA-AB-2811 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2812    TCGA-AB-2813    TCGA-AB-2814    TCGA-AB-2816    TCGA-AB-2817 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2818    TCGA-AB-2819    TCGA-AB-2821    TCGA-AB-2822    TCGA-AB-2824 
"KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2825    TCGA-AB-2826    TCGA-AB-2827    TCGA-AB-2828    TCGA-AB-2829 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2830    TCGA-AB-2831    TCGA-AB-2832    TCGA-AB-2833    TCGA-AB-2834 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2835    TCGA-AB-2836    TCGA-AB-2838    TCGA-AB-2839    TCGA-AB-2840 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2841    TCGA-AB-2843    TCGA-AB-2844    TCGA-AB-2845    TCGA-AB-2846 
"KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE"   "KIT MUTATED" 
   TCGA-AB-2847    TCGA-AB-2848    TCGA-AB-2849    TCGA-AB-2850    TCGA-AB-2851 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2853    TCGA-AB-2854    TCGA-AB-2855    TCGA-AB-2857    TCGA-AB-2858 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2859    TCGA-AB-2860    TCGA-AB-2862    TCGA-AB-2863    TCGA-AB-2864 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2865    TCGA-AB-2866    TCGA-AB-2867    TCGA-AB-2868    TCGA-AB-2869 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2870    TCGA-AB-2871    TCGA-AB-2872    TCGA-AB-2873    TCGA-AB-2874 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2875    TCGA-AB-2876    TCGA-AB-2877    TCGA-AB-2878    TCGA-AB-2879 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2880    TCGA-AB-2881    TCGA-AB-2882    TCGA-AB-2883    TCGA-AB-2884 
"KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2885    TCGA-AB-2886    TCGA-AB-2888    TCGA-AB-2889    TCGA-AB-2892 
"KIT WILD-TYPE" "KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2893    TCGA-AB-2894    TCGA-AB-2895    TCGA-AB-2896    TCGA-AB-2897 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2898    TCGA-AB-2899    TCGA-AB-2900    TCGA-AB-2901    TCGA-AB-2904 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2905    TCGA-AB-2906    TCGA-AB-2908    TCGA-AB-2909    TCGA-AB-2911 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2912    TCGA-AB-2913    TCGA-AB-2914    TCGA-AB-2916    TCGA-AB-2917 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2919    TCGA-AB-2920    TCGA-AB-2923    TCGA-AB-2924    TCGA-AB-2925 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2926    TCGA-AB-2927    TCGA-AB-2928    TCGA-AB-2929    TCGA-AB-2933 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2934    TCGA-AB-2935    TCGA-AB-2936    TCGA-AB-2937    TCGA-AB-2938 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" 
   TCGA-AB-2939    TCGA-AB-2942    TCGA-AB-2945    TCGA-AB-2947    TCGA-AB-2948 
  "KIT MUTATED" "KIT WILD-TYPE"   "KIT MUTATED" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2949    TCGA-AB-2950    TCGA-AB-2952    TCGA-AB-2954    TCGA-AB-2955 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2956    TCGA-AB-2957    TCGA-AB-2959    TCGA-AB-2963    TCGA-AB-2964 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2965    TCGA-AB-2966    TCGA-AB-2967    TCGA-AB-2968    TCGA-AB-2969 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2970    TCGA-AB-2971    TCGA-AB-2972    TCGA-AB-2973    TCGA-AB-2974 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2976    TCGA-AB-2977    TCGA-AB-2978    TCGA-AB-2979    TCGA-AB-2980 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2981    TCGA-AB-2982    TCGA-AB-2983    TCGA-AB-2984    TCGA-AB-2985 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2986    TCGA-AB-2987    TCGA-AB-2988    TCGA-AB-2989    TCGA-AB-2990 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2991    TCGA-AB-2992    TCGA-AB-2993    TCGA-AB-2994    TCGA-AB-2995 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-2996    TCGA-AB-2998    TCGA-AB-2999    TCGA-AB-3000    TCGA-AB-3001 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-3002    TCGA-AB-3005    TCGA-AB-3006    TCGA-AB-3007    TCGA-AB-3008 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
   TCGA-AB-3009    TCGA-AB-3011    TCGA-AB-3012 
"KIT WILD-TYPE" "KIT WILD-TYPE" "KIT WILD-TYPE" 
[1] "hr=" "1.3"
D14V2, continuous
D14V3, binary
               cls
clus              0   1
  KIT MUTATED     5   3
  KIT WILD-TYPE  86 103
[1] "tbl2"
               cls
clus            [,1] [,2]
  KIT MUTATED      5    3
  KIT WILD-TYPE   86  103
        clus
vv       KIT MUTATED KIT WILD-TYPE
  FEMALE           5            86
  MALE             3           103

Clustering(15) Variable = PHF6 MUTATION ANALYSIS
D15V1, survival
                sevent
clus2              0   1
  PHF6 MUTATED     1   5
  PHF6 WILD-TYPE  64 103
  PHF6 MUTATED PHF6 WILD-TYPE 
             6            167 
  PHF6 MUTATED PHF6 WILD-TYPE 
             5            103 
$`PHF6 MUTATED`
TCGA-AB-2804 TCGA-AB-2855 TCGA-AB-2912 TCGA-AB-2959 TCGA-AB-2976 TCGA-AB-3009 
       84.03         6.94         9.01        16.08        30.08        18.94 

$`PHF6 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 TCGA-AB-2808 
       12.00        26.04        18.94        31.04         5.92        94.06 
TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 TCGA-AB-2814 
        2.04         1.02         7.99        12.03         1.02        26.04 
TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 TCGA-AB-2822 
        8.05         8.98         9.96        82.06        26.99        31.96 
TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 
        0.99         6.94        24.03         8.98        75.09         8.98 
TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 
        9.04        21.04        12.00        14.99         8.05        55.00 
TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 
       17.00        12.00        15.98         0.92        46.06         7.07 
TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 
        3.98         9.96        46.09        19.96        14.96        72.99 
TCGA-AB-2850 TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2857 TCGA-AB-2858 
        1.97         7.96         2.89        12.03        10.06        18.94 
TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2865 
        9.96        14.01        47.01         1.02        18.97         2.01 
TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 
        5.00         6.05         4.96         7.99         5.00         5.03 
TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 
       20.98         8.98        13.02         6.97        40.08        20.98 
TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 
       12.00         8.05        13.94        12.92        12.00        24.00 
TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 
       24.03         7.04         5.95        10.98         9.99        30.97 
TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 
        6.97         5.92         5.03         7.00         7.99        12.92 
TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 
       22.06         6.02         1.91        16.96        52.93        18.97 
TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2913 TCGA-AB-2914 TCGA-AB-2916 
        1.02         0.99        38.99        39.98        26.04        29.00 
TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 
       39.98         2.01        12.03         1.02         2.96         7.96 
TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 
       14.99         2.93         1.94         4.04         4.01         0.92 
TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2942 
        1.97         1.94         7.07         9.96        14.96        21.07 
TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 TCGA-AB-2952 
        7.99         1.02        19.07        22.98        10.06         1.02 
TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2963 TCGA-AB-2964 
       49.05        16.08         6.02        19.99        53.95        41.98 
TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2970 
       11.01        28.08        34.03        15.06        37.05        10.03 
TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2977 TCGA-AB-2978 
       26.04         0.99        20.02         3.02         0.99        22.98 
TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 
       22.06        22.98        16.01         4.90        11.01        38.01 
TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 
        8.98         6.97         6.05         0.99        12.00        15.02 
TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 
       60.03        56.09        25.02        59.11        50.99        51.98 
TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 
        1.02        57.01        41.06        51.98        47.05        69.01 
TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3011 TCGA-AB-3012 
       15.91        51.98        27.02        61.97        62.04 

  PHF6 MUTATED PHF6 WILD-TYPE 
          6.94           0.92 
  PHF6 MUTATED PHF6 WILD-TYPE 
         84.03          94.06 
  PHF6 MUTATED PHF6 WILD-TYPE 
         17.51          12.03 
[1] "6.9 - 84.0 (17.5)" "0.9 - 94.1 (12.0)"
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" "PHF6 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
  "PHF6 MUTATED" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" "PHF6 WILD-TYPE" 
    TCGA-AB-3012 
"PHF6 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" "PHF6 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
  "PHF6 MUTATED" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" "PHF6 WILD-TYPE" 
    TCGA-AB-3012 
"PHF6 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" "PHF6 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
  "PHF6 MUTATED" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" "PHF6 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"PHF6 WILD-TYPE" "PHF6 WILD-TYPE"   "PHF6 MUTATED" "PHF6 WILD-TYPE" 
    TCGA-AB-3012 
"PHF6 WILD-TYPE" 
[1] "hr=" "1.1"
D15V2, continuous
D15V3, binary
                cls
clus               0   1
  PHF6 MUTATED     0   6
  PHF6 WILD-TYPE  91 100
[1] "tbl2"
                cls
clus             [,1] [,2]
  PHF6 MUTATED      0    6
  PHF6 WILD-TYPE   91  100
        clus
vv       PHF6 MUTATED PHF6 WILD-TYPE
  FEMALE            0             91
  MALE              6            100

Clustering(16) Variable = SMC1A MUTATION ANALYSIS
D16V1, survival
                 sevent
clus2               0   1
  SMC1A MUTATED     0   7
  SMC1A WILD-TYPE  65 101
  SMC1A MUTATED SMC1A WILD-TYPE 
              7             166 
  SMC1A MUTATED SMC1A WILD-TYPE 
              7             101 
$`SMC1A MUTATED`
TCGA-AB-2811 TCGA-AB-2822 TCGA-AB-2824 TCGA-AB-2844 TCGA-AB-2858 TCGA-AB-2900 
        7.99        31.96         0.99         3.98        18.94         6.02 
TCGA-AB-2963 
       53.95 

$`SMC1A WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2812 TCGA-AB-2813 TCGA-AB-2814 
       94.06         2.04         1.02        12.03         1.02        26.04 
TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 TCGA-AB-2825 
        8.05         8.98         9.96        82.06        26.99         6.94 
TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 
       24.03         8.98        75.09         8.98         9.04        21.04 
TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2838 
       12.00        14.99         8.05        55.00        17.00        12.00 
TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 TCGA-AB-2845 TCGA-AB-2846 
       15.98         0.92        46.06         7.07         9.96        46.09 
TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 TCGA-AB-2851 TCGA-AB-2853 
       19.96        14.96        72.99         1.97         7.96         2.89 
TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 
       12.03         6.94        10.06         9.96        14.01        47.01 
TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2868 
        1.02        18.97         2.01         5.00         6.05         4.96 
TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 
        7.99         5.00         5.03        20.98         8.98        13.02 
TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 
        6.97        40.08        20.98        12.00         8.05        13.94 
TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 
       12.92        12.00        24.00        24.03         7.04         5.95 
TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 
       10.98         9.99        30.97         6.97         5.92         5.03 
TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2901 TCGA-AB-2904 
        7.00         7.99        12.92        22.06         1.91        16.96 
TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 
       52.93        18.97         1.02         0.99        38.99         9.01 
TCGA-AB-2913 TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 
       39.98        26.04        29.00        39.98         2.01        12.03 
TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 
        1.02         2.96         7.96        14.99         2.93         1.94 
TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 
        4.04         4.01         0.92         1.97         1.94         7.07 
TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2948 
        9.96        14.96        21.07         7.99         1.02        19.07 
TCGA-AB-2949 TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 
       22.98        10.06         1.02        49.05        16.08         6.02 
TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 
       19.99        16.08        41.98        11.01        28.08        34.03 
TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 
       15.06        37.05        10.03        26.04         0.99        20.02 
TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 
        3.02        30.08         0.99        22.98        22.06        22.98 
TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 
       16.01         4.90        11.01        38.01         8.98         6.97 
TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 
        6.05         0.99        12.00        15.02        60.03        56.09 
TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 
       25.02        59.11        50.99        51.98         1.02        57.01 
TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 
       41.06        51.98        47.05        69.01        15.91        51.98 
TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       27.02        18.94        61.97        62.04 

  SMC1A MUTATED SMC1A WILD-TYPE 
           0.99            0.92 
  SMC1A MUTATED SMC1A WILD-TYPE 
          53.95           94.06 
  SMC1A MUTATED SMC1A WILD-TYPE 
           7.99           12.03 
[1] "1.0 - 54.0 (8.0)"  "0.9 - 94.1 (12.0)"
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"SMC1A WILD-TYPE"   "SMC1A MUTATED" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE"   "SMC1A MUTATED"   "SMC1A MUTATED" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"SMC1A WILD-TYPE"   "SMC1A MUTATED" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"SMC1A WILD-TYPE"   "SMC1A MUTATED" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE"   "SMC1A MUTATED" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
  "SMC1A MUTATED" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-3012 
"SMC1A WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"SMC1A WILD-TYPE"   "SMC1A MUTATED" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE"   "SMC1A MUTATED"   "SMC1A MUTATED" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"SMC1A WILD-TYPE"   "SMC1A MUTATED" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"SMC1A WILD-TYPE"   "SMC1A MUTATED" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE"   "SMC1A MUTATED" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
  "SMC1A MUTATED" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-3012 
"SMC1A WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"SMC1A WILD-TYPE"   "SMC1A MUTATED" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE"   "SMC1A MUTATED"   "SMC1A MUTATED" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"SMC1A WILD-TYPE"   "SMC1A MUTATED" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"SMC1A WILD-TYPE"   "SMC1A MUTATED" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE"   "SMC1A MUTATED" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
  "SMC1A MUTATED" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" "SMC1A WILD-TYPE" 
     TCGA-AB-3012 
"SMC1A WILD-TYPE" 
[1] "hr=" "1.8"
D16V2, continuous
D16V3, binary
                 cls
clus                0   1
  SMC1A MUTATED     1   6
  SMC1A WILD-TYPE  90 100
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SMC1A MUTATED      1    6
  SMC1A WILD-TYPE   90  100
        clus
vv       SMC1A MUTATED SMC1A WILD-TYPE
  FEMALE             1              90
  MALE               6             100

Clustering(17) Variable = SMC3 MUTATION ANALYSIS
D17V1, survival
                sevent
clus2              0   1
  SMC3 MUTATED     1   6
  SMC3 WILD-TYPE  64 102
  SMC3 MUTATED SMC3 WILD-TYPE 
             7            166 
  SMC3 MUTATED SMC3 WILD-TYPE 
             6            102 
$`SMC3 MUTATED`
TCGA-AB-2839 TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2908 TCGA-AB-2912 TCGA-AB-2950 
       15.98         7.96         2.89         1.02         9.01        10.06 
TCGA-AB-2993 
       25.02 

$`SMC3 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
       94.06         2.04         1.02         7.99        12.03         1.02 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 
       26.04         8.05         8.98         9.96        82.06        26.99 
TCGA-AB-2822 TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 
       31.96         0.99         6.94        24.03         8.98        75.09 
TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 
        8.98         9.04        21.04        12.00        14.99         8.05 
TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 
       55.00        17.00        12.00         0.92        46.06         7.07 
TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 
        3.98         9.96        46.09        19.96        14.96        72.99 
TCGA-AB-2850 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 
        1.97        12.03         6.94        10.06        18.94         9.96 
TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2866 
       14.01        47.01         1.02        18.97         2.01         5.00 
TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 
        6.05         4.96         7.99         5.00         5.03        20.98 
TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2878 
        8.98        13.02         6.97        40.08        20.98        12.00 
TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2884 
        8.05        13.94        12.92        12.00        24.00        24.03 
TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 
        7.04         5.95        10.98         9.99        30.97         6.97 
TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 
        5.92         5.03         7.00         7.99        12.92        22.06 
TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2909 
        6.02         1.91        16.96        52.93        18.97         0.99 
TCGA-AB-2911 TCGA-AB-2913 TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 
       38.99        39.98        26.04        29.00        39.98         2.01 
TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 
       12.03         1.02         2.96         7.96        14.99         2.93 
TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 
        1.94         4.04         4.01         0.92         1.97         1.94 
TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 
        7.07         9.96        14.96        21.07         7.99         1.02 
TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 
       19.07        22.98         1.02        49.05        16.08         6.02 
TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 
       19.99        16.08        53.95        41.98        11.01        28.08 
TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 
       34.03        15.06        37.05        10.03        26.04         0.99 
TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 
       20.02         3.02        30.08         0.99        22.98        22.06 
TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 
       22.98        16.01         4.90        11.01        38.01         8.98 
TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 
        6.97         6.05         0.99        12.00        15.02        60.03 
TCGA-AB-2992 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 
       56.09        59.11        50.99        51.98         1.02        57.01 
TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 
       41.06        51.98        47.05        69.01        15.91        51.98 
TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       27.02        18.94        61.97        62.04 

  SMC3 MUTATED SMC3 WILD-TYPE 
          1.02           0.92 
  SMC3 MUTATED SMC3 WILD-TYPE 
         25.02          94.06 
  SMC3 MUTATED SMC3 WILD-TYPE 
         9.010         12.475 
[1] "1.0 - 25.0 (9.0)"  "0.9 - 94.1 (12.5)"
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"SMC3 WILD-TYPE"   "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
  "SMC3 MUTATED"   "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
  "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE"   "SMC3 MUTATED" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"SMC3 WILD-TYPE"   "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"SMC3 WILD-TYPE"   "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-3012 
"SMC3 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"SMC3 WILD-TYPE"   "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
  "SMC3 MUTATED"   "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
  "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE"   "SMC3 MUTATED" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"SMC3 WILD-TYPE"   "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"SMC3 WILD-TYPE"   "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-3012 
"SMC3 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"SMC3 WILD-TYPE"   "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
  "SMC3 MUTATED"   "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
  "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE"   "SMC3 MUTATED" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"SMC3 WILD-TYPE"   "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"SMC3 WILD-TYPE"   "SMC3 MUTATED" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" "SMC3 WILD-TYPE" 
    TCGA-AB-3012 
"SMC3 WILD-TYPE" 
[1] "hr=" "2.1"
D17V2, continuous
D17V3, binary
                cls
clus               0   1
  SMC3 MUTATED     4   3
  SMC3 WILD-TYPE  87 103
[1] "tbl2"
                cls
clus             [,1] [,2]
  SMC3 MUTATED      4    3
  SMC3 WILD-TYPE   87  103
        clus
vv       SMC3 MUTATED SMC3 WILD-TYPE
  FEMALE            4             87
  MALE              3            103

Clustering(18) Variable = RAD21 MUTATION ANALYSIS
D18V1, survival
                 sevent
clus2               0   1
  RAD21 MUTATED     2   2
  RAD21 WILD-TYPE  63 106
  RAD21 MUTATED RAD21 WILD-TYPE 
              4             169 
  RAD21 MUTATED RAD21 WILD-TYPE 
              2             106 
$`RAD21 MUTATED`
TCGA-AB-2818 TCGA-AB-2886 TCGA-AB-2967 TCGA-AB-2986 
        9.96         5.95        34.03         6.97 

$`RAD21 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
       94.06         2.04         1.02         7.99        12.03         1.02 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2819 TCGA-AB-2821 TCGA-AB-2822 
       26.04         8.05         8.98        82.06        26.99        31.96 
TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 
        0.99         6.94        24.03         8.98        75.09         8.98 
TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 
        9.04        21.04        12.00        14.99         8.05        55.00 
TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 
       17.00        12.00        15.98         0.92        46.06         7.07 
TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 
        3.98         9.96        46.09        19.96        14.96        72.99 
TCGA-AB-2850 TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 
        1.97         7.96         2.89        12.03         6.94        10.06 
TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 
       18.94         9.96        14.01        47.01         1.02        18.97 
TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 
        2.01         5.00         6.05         4.96         7.99         5.00 
TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 
        5.03        20.98         8.98        13.02         6.97        40.08 
TCGA-AB-2877 TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 
       20.98        12.00         8.05        13.94        12.92        12.00 
TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 
       24.00        24.03         7.04        10.98         9.99        30.97 
TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 
        6.97         5.92         5.03         7.00         7.99        12.92 
TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 
       22.06         6.02         1.91        16.96        52.93        18.97 
TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2914 
        1.02         0.99        38.99         9.01        39.98        26.04 
TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 
       29.00        39.98         2.01        12.03         1.02         2.96 
TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 
        7.96        14.99         2.93         1.94         4.04         4.01 
TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 
        0.92         1.97         1.94         7.07         9.96        14.96 
TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 
       21.07         7.99         1.02        19.07        22.98        10.06 
TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 
        1.02        49.05        16.08         6.02        19.99        16.08 
TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2968 TCGA-AB-2969 
       53.95        41.98        11.01        28.08        15.06        37.05 
TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2976 
       10.03        26.04         0.99        20.02         3.02        30.08 
TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 
        0.99        22.98        22.06        22.98        16.01         4.90 
TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 
       11.01        38.01         8.98         6.05         0.99        12.00 
TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 
       15.02        60.03        56.09        25.02        59.11        50.99 
TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 
       51.98         1.02        57.01        41.06        51.98        47.05 
TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 
       69.01        15.91        51.98        27.02        18.94        61.97 
TCGA-AB-3012 
       62.04 

  RAD21 MUTATED RAD21 WILD-TYPE 
           5.95            0.92 
  RAD21 MUTATED RAD21 WILD-TYPE 
          34.03           94.06 
  RAD21 MUTATED RAD21 WILD-TYPE 
          8.465          12.030 
[1] "6.0 - 34.0 (8.5)"  "0.9 - 94.1 (12.0)"
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE"   "RAD21 MUTATED" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
  "RAD21 MUTATED" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
  "RAD21 MUTATED" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE"   "RAD21 MUTATED" "RAD21 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-3012 
"RAD21 WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE"   "RAD21 MUTATED" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
  "RAD21 MUTATED" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
  "RAD21 MUTATED" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE"   "RAD21 MUTATED" "RAD21 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-3012 
"RAD21 WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE"   "RAD21 MUTATED" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
  "RAD21 MUTATED" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
  "RAD21 MUTATED" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE"   "RAD21 MUTATED" "RAD21 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" "RAD21 WILD-TYPE" 
     TCGA-AB-3012 
"RAD21 WILD-TYPE" 
[1] "hr=" "1"  
D18V2, continuous
D18V3, binary
                 cls
clus                0   1
  RAD21 MUTATED     2   3
  RAD21 WILD-TYPE  89 103
[1] "tbl2"
                 cls
clus              [,1] [,2]
  RAD21 MUTATED      2    3
  RAD21 WILD-TYPE   89  103
        clus
vv       RAD21 MUTATED RAD21 WILD-TYPE
  FEMALE             2              89
  MALE               3             103

Clustering(19) Variable = STAG2 MUTATION ANALYSIS
D19V1, survival
                 sevent
clus2               0   1
  STAG2 MUTATED     4   2
  STAG2 WILD-TYPE  61 106
  STAG2 MUTATED STAG2 WILD-TYPE 
              6             167 
  STAG2 MUTATED STAG2 WILD-TYPE 
              2             106 
$`STAG2 MUTATED`
TCGA-AB-2850 TCGA-AB-2871 TCGA-AB-2913 TCGA-AB-2964 TCGA-AB-2972 TCGA-AB-2978 
        1.97         5.03        39.98        41.98         0.99        22.98 

$`STAG2 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
       94.06         2.04         1.02         7.99        12.03         1.02 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 
       26.04         8.05         8.98         9.96        82.06        26.99 
TCGA-AB-2822 TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 
       31.96         0.99         6.94        24.03         8.98        75.09 
TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 
        8.98         9.04        21.04        12.00        14.99         8.05 
TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 
       55.00        17.00        12.00        15.98         0.92        46.06 
TCGA-AB-2843 TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 
        7.07         3.98         9.96        46.09        19.96        14.96 
TCGA-AB-2849 TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 
       72.99         7.96         2.89        12.03         6.94        10.06 
TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 
       18.94         9.96        14.01        47.01         1.02        18.97 
TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 
        2.01         5.00         6.05         4.96         7.99         5.00 
TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 
       20.98         8.98        13.02         6.97        40.08        20.98 
TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 
       12.00         8.05        13.94        12.92        12.00        24.00 
TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 
       24.03         7.04         5.95        10.98         9.99        30.97 
TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 
        6.97         5.92         5.03         7.00         7.99        12.92 
TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 
       22.06         6.02         1.91        16.96        52.93        18.97 
TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2914 TCGA-AB-2916 
        1.02         0.99        38.99         9.01        26.04        29.00 
TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 
       39.98         2.01        12.03         1.02         2.96         7.96 
TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 
       14.99         2.93         1.94         4.04         4.01         0.92 
TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2942 
        1.97         1.94         7.07         9.96        14.96        21.07 
TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 TCGA-AB-2952 
        7.99         1.02        19.07        22.98        10.06         1.02 
TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2963 
       49.05        16.08         6.02        19.99        16.08        53.95 
TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2970 
       11.01        28.08        34.03        15.06        37.05        10.03 
TCGA-AB-2971 TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2979 
       26.04        20.02         3.02        30.08         0.99        22.06 
TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 
       22.98        16.01         4.90        11.01        38.01         8.98 
TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 
        6.97         6.05         0.99        12.00        15.02        60.03 
TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2998 
       56.09        25.02        59.11        50.99        51.98         1.02 
TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 
       57.01        41.06        51.98        47.05        69.01        15.91 
TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       51.98        27.02        18.94        61.97        62.04 

  STAG2 MUTATED STAG2 WILD-TYPE 
           0.99            0.92 
  STAG2 MUTATED STAG2 WILD-TYPE 
          41.98           94.06 
  STAG2 MUTATED STAG2 WILD-TYPE 
         14.005          12.030 
[1] "1.0 - 42.0 (14.0)" "0.9 - 94.1 (12.0)"
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE"   "STAG2 MUTATED" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"STAG2 WILD-TYPE"   "STAG2 MUTATED" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
  "STAG2 MUTATED" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"STAG2 WILD-TYPE"   "STAG2 MUTATED" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"STAG2 WILD-TYPE"   "STAG2 MUTATED" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE"   "STAG2 MUTATED" "STAG2 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-3012 
"STAG2 WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE"   "STAG2 MUTATED" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"STAG2 WILD-TYPE"   "STAG2 MUTATED" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
  "STAG2 MUTATED" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"STAG2 WILD-TYPE"   "STAG2 MUTATED" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"STAG2 WILD-TYPE"   "STAG2 MUTATED" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE"   "STAG2 MUTATED" "STAG2 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-3012 
"STAG2 WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE"   "STAG2 MUTATED" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"STAG2 WILD-TYPE"   "STAG2 MUTATED" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
  "STAG2 MUTATED" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"STAG2 WILD-TYPE"   "STAG2 MUTATED" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"STAG2 WILD-TYPE"   "STAG2 MUTATED" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE"   "STAG2 MUTATED" "STAG2 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" "STAG2 WILD-TYPE" 
     TCGA-AB-3012 
"STAG2 WILD-TYPE" 
[1] "hr=" "1.8"
D19V2, continuous
D19V3, binary
                 cls
clus                0   1
  STAG2 MUTATED     4   2
  STAG2 WILD-TYPE  87 104
[1] "tbl2"
                 cls
clus              [,1] [,2]
  STAG2 MUTATED      4    2
  STAG2 WILD-TYPE   87  104
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  FEMALE             4              87
  MALE               2             104

Clustering(20) Variable = FAM5C MUTATION ANALYSIS
D20V1, survival
                 sevent
clus2               0   1
  FAM5C MUTATED     0   5
  FAM5C WILD-TYPE  65 103
  FAM5C MUTATED FAM5C WILD-TYPE 
              5             168 
  FAM5C MUTATED FAM5C WILD-TYPE 
              5             103 
$`FAM5C MUTATED`
TCGA-AB-2817 TCGA-AB-2838 TCGA-AB-2965 TCGA-AB-2976 TCGA-AB-2998 
        8.98        12.00        11.01        30.08         1.02 

$`FAM5C WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
       94.06         2.04         1.02         7.99        12.03         1.02 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 TCGA-AB-2822 
       26.04         8.05         9.96        82.06        26.99        31.96 
TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 
        0.99         6.94        24.03         8.98        75.09         8.98 
TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 
        9.04        21.04        12.00        14.99         8.05        55.00 
TCGA-AB-2836 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 TCGA-AB-2844 
       17.00        15.98         0.92        46.06         7.07         3.98 
TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 
        9.96        46.09        19.96        14.96        72.99         1.97 
TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 
        7.96         2.89        12.03         6.94        10.06        18.94 
TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2865 
        9.96        14.01        47.01         1.02        18.97         2.01 
TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 
        5.00         6.05         4.96         7.99         5.00         5.03 
TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 
       20.98         8.98        13.02         6.97        40.08        20.98 
TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 
       12.00         8.05        13.94        12.92        12.00        24.00 
TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 
       24.03         7.04         5.95        10.98         9.99        30.97 
TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 
        6.97         5.92         5.03         7.00         7.99        12.92 
TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 
       22.06         6.02         1.91        16.96        52.93        18.97 
TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2914 
        1.02         0.99        38.99         9.01        39.98        26.04 
TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 
       29.00        39.98         2.01        12.03         1.02         2.96 
TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 
        7.96        14.99         2.93         1.94         4.04         4.01 
TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 
        0.92         1.97         1.94         7.07         9.96        14.96 
TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 
       21.07         7.99         1.02        19.07        22.98        10.06 
TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 
        1.02        49.05        16.08         6.02        19.99        16.08 
TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2969 
       53.95        41.98        28.08        34.03        15.06        37.05 
TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2977 
       10.03        26.04         0.99        20.02         3.02         0.99 
TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 
       22.98        22.06        22.98        16.01         4.90        11.01 
TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 
       38.01         8.98         6.97         6.05         0.99        12.00 
TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 
       15.02        60.03        56.09        25.02        59.11        50.99 
TCGA-AB-2996 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 
       51.98        57.01        41.06        51.98        47.05        69.01 
TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       15.91        51.98        27.02        18.94        61.97        62.04 

  FAM5C MUTATED FAM5C WILD-TYPE 
           1.02            0.92 
  FAM5C MUTATED FAM5C WILD-TYPE 
          30.08           94.06 
  FAM5C MUTATED FAM5C WILD-TYPE 
         11.010          12.475 
[1] "1.0 - 30.1 (11.0)" "0.9 - 94.1 (12.5)"
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE"   "FAM5C MUTATED" "FAM5C WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
  "FAM5C MUTATED" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE"   "FAM5C MUTATED" "FAM5C WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
  "FAM5C MUTATED" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"FAM5C WILD-TYPE"   "FAM5C MUTATED" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-3012 
"FAM5C WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE"   "FAM5C MUTATED" "FAM5C WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
  "FAM5C MUTATED" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE"   "FAM5C MUTATED" "FAM5C WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
  "FAM5C MUTATED" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"FAM5C WILD-TYPE"   "FAM5C MUTATED" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-3012 
"FAM5C WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE"   "FAM5C MUTATED" "FAM5C WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
  "FAM5C MUTATED" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE"   "FAM5C MUTATED" "FAM5C WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
  "FAM5C MUTATED" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"FAM5C WILD-TYPE"   "FAM5C MUTATED" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" "FAM5C WILD-TYPE" 
     TCGA-AB-3012 
"FAM5C WILD-TYPE" 
[1] "hr=" "2.1"
D20V2, continuous
D20V3, binary
                 cls
clus                0   1
  FAM5C MUTATED     1   4
  FAM5C WILD-TYPE  90 102
[1] "tbl2"
                 cls
clus              [,1] [,2]
  FAM5C MUTATED      1    4
  FAM5C WILD-TYPE   90  102
        clus
vv       FAM5C MUTATED FAM5C WILD-TYPE
  FEMALE             1              90
  MALE               4             102

Clustering(21) Variable = EZH2 MUTATION ANALYSIS
D21V1, survival
                sevent
clus2              0   1
  EZH2 MUTATED     0   2
  EZH2 WILD-TYPE  65 106
  EZH2 MUTATED EZH2 WILD-TYPE 
             2            171 
  EZH2 MUTATED EZH2 WILD-TYPE 
             2            106 
$`EZH2 MUTATED`
TCGA-AB-2817 TCGA-AB-2865 
        8.98         2.01 

$`EZH2 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
       94.06         2.04         1.02         7.99        12.03         1.02 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 TCGA-AB-2822 
       26.04         8.05         9.96        82.06        26.99        31.96 
TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 
        0.99         6.94        24.03         8.98        75.09         8.98 
TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 
        9.04        21.04        12.00        14.99         8.05        55.00 
TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 
       17.00        12.00        15.98         0.92        46.06         7.07 
TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 
        3.98         9.96        46.09        19.96        14.96        72.99 
TCGA-AB-2850 TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 
        1.97         7.96         2.89        12.03         6.94        10.06 
TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 
       18.94         9.96        14.01        47.01         1.02        18.97 
TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 
        5.00         6.05         4.96         7.99         5.00         5.03 
TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 
       20.98         8.98        13.02         6.97        40.08        20.98 
TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 
       12.00         8.05        13.94        12.92        12.00        24.00 
TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 
       24.03         7.04         5.95        10.98         9.99        30.97 
TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 
        6.97         5.92         5.03         7.00         7.99        12.92 
TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 
       22.06         6.02         1.91        16.96        52.93        18.97 
TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2914 
        1.02         0.99        38.99         9.01        39.98        26.04 
TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 
       29.00        39.98         2.01        12.03         1.02         2.96 
TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 
        7.96        14.99         2.93         1.94         4.04         4.01 
TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 
        0.92         1.97         1.94         7.07         9.96        14.96 
TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 
       21.07         7.99         1.02        19.07        22.98        10.06 
TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 
        1.02        49.05        16.08         6.02        19.99        16.08 
TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 
       53.95        41.98        11.01        28.08        34.03        15.06 
TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 
       37.05        10.03        26.04         0.99        20.02         3.02 
TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 
       30.08         0.99        22.98        22.06        22.98        16.01 
TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 
        4.90        11.01        38.01         8.98         6.97         6.05 
TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 
        0.99        12.00        15.02        60.03        56.09        25.02 
TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 
       59.11        50.99        51.98         1.02        57.01        41.06 
TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 
       51.98        47.05        69.01        15.91        51.98        27.02 
TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       18.94        61.97        62.04 

  EZH2 MUTATED EZH2 WILD-TYPE 
          2.01           0.92 
  EZH2 MUTATED EZH2 WILD-TYPE 
          8.98          94.06 
  EZH2 MUTATED EZH2 WILD-TYPE 
         5.495         12.030 
[1] "2.0 - 9.0 (5.5)"   "0.9 - 94.1 (12.0)"
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE"   "EZH2 MUTATED" "EZH2 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE"   "EZH2 MUTATED" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-3012 
"EZH2 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE"   "EZH2 MUTATED" "EZH2 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE"   "EZH2 MUTATED" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-3012 
"EZH2 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE"   "EZH2 MUTATED" "EZH2 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE"   "EZH2 MUTATED" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-3012 
"EZH2 WILD-TYPE" 
[1] "Remove cluster labels:" "EZH2 MUTATED"          
clus
  EZH2 MUTATED EZH2 WILD-TYPE 
             2            171 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2818     TCGA-AB-2819 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824     TCGA-AB-2825 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828     TCGA-AB-2829 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832     TCGA-AB-2833 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836     TCGA-AB-2838 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841     TCGA-AB-2843 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846     TCGA-AB-2847 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850     TCGA-AB-2851 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855     TCGA-AB-2857 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860     TCGA-AB-2862 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2866     TCGA-AB-2867 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2868     TCGA-AB-2869     TCGA-AB-2870     TCGA-AB-2871 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2872     TCGA-AB-2873     TCGA-AB-2874     TCGA-AB-2875 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2876     TCGA-AB-2877     TCGA-AB-2878     TCGA-AB-2879 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2880     TCGA-AB-2881     TCGA-AB-2882     TCGA-AB-2883 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2884     TCGA-AB-2885     TCGA-AB-2886     TCGA-AB-2888 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2889     TCGA-AB-2892     TCGA-AB-2893     TCGA-AB-2894 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2895     TCGA-AB-2896     TCGA-AB-2897     TCGA-AB-2898 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2899     TCGA-AB-2900     TCGA-AB-2901     TCGA-AB-2904 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2905     TCGA-AB-2906     TCGA-AB-2908     TCGA-AB-2909 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2911     TCGA-AB-2912     TCGA-AB-2913     TCGA-AB-2914 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2916     TCGA-AB-2917     TCGA-AB-2919     TCGA-AB-2920 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2923     TCGA-AB-2924     TCGA-AB-2925     TCGA-AB-2926 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2927     TCGA-AB-2928     TCGA-AB-2929     TCGA-AB-2933 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2934     TCGA-AB-2935     TCGA-AB-2936     TCGA-AB-2937 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2938     TCGA-AB-2939     TCGA-AB-2942     TCGA-AB-2945 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2947     TCGA-AB-2948     TCGA-AB-2949     TCGA-AB-2950 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2952     TCGA-AB-2954     TCGA-AB-2955     TCGA-AB-2956 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2957     TCGA-AB-2959     TCGA-AB-2963     TCGA-AB-2964 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2965     TCGA-AB-2966     TCGA-AB-2967     TCGA-AB-2968 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2969     TCGA-AB-2970     TCGA-AB-2971     TCGA-AB-2972 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2973     TCGA-AB-2974     TCGA-AB-2976     TCGA-AB-2977 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2978     TCGA-AB-2979     TCGA-AB-2980     TCGA-AB-2981 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2982     TCGA-AB-2983     TCGA-AB-2984     TCGA-AB-2985 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2986     TCGA-AB-2987     TCGA-AB-2988     TCGA-AB-2989 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2990     TCGA-AB-2991     TCGA-AB-2992     TCGA-AB-2993 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2994     TCGA-AB-2995     TCGA-AB-2996     TCGA-AB-2998 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-2999     TCGA-AB-3000     TCGA-AB-3001     TCGA-AB-3002 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-3005     TCGA-AB-3006     TCGA-AB-3007     TCGA-AB-3008 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
    TCGA-AB-3009     TCGA-AB-3011     TCGA-AB-3012 
"EZH2 WILD-TYPE" "EZH2 WILD-TYPE" "EZH2 WILD-TYPE" 
D21V2, continuous
D21V3, binary
                cls
clus               0   1
  EZH2 MUTATED     1   2
  EZH2 WILD-TYPE  90 104
[1] "tbl2"
                cls
clus             [,1] [,2]
  EZH2 MUTATED      1    2
  EZH2 WILD-TYPE   90  104
        clus
vv       EZH2 MUTATED EZH2 WILD-TYPE
  FEMALE            1             90
  MALE              2            104

Clustering(22) Variable = ASXL1 MUTATION ANALYSIS
D22V1, survival
                 sevent
clus2               0   1
  ASXL1 MUTATED     0   4
  ASXL1 WILD-TYPE  65 104
  ASXL1 MUTATED ASXL1 WILD-TYPE 
              4             169 
  ASXL1 MUTATED ASXL1 WILD-TYPE 
              4             104 
$`ASXL1 MUTATED`
TCGA-AB-2807 TCGA-AB-2821 TCGA-AB-2864 TCGA-AB-2927 
        5.92        26.99        18.97         2.93 

$`ASXL1 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2808 
       12.00        26.04        84.03        18.94        31.04        94.06 
TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 TCGA-AB-2814 
        2.04         1.02         7.99        12.03         1.02        26.04 
TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2822 TCGA-AB-2824 
        8.05         8.98         9.96        82.06        31.96         0.99 
TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 TCGA-AB-2830 
        6.94        24.03         8.98        75.09         8.98         9.04 
TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 
       21.04        12.00        14.99         8.05        55.00        17.00 
TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 TCGA-AB-2844 
       12.00        15.98         0.92        46.06         7.07         3.98 
TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2850 
        9.96        46.09        19.96        14.96        72.99         1.97 
TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2858 
        7.96         2.89        12.03         6.94        10.06        18.94 
TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2865 TCGA-AB-2866 
        9.96        14.01        47.01         1.02         2.01         5.00 
TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 
        6.05         4.96         7.99         5.00         5.03        20.98 
TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2878 
        8.98        13.02         6.97        40.08        20.98        12.00 
TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2884 
        8.05        13.94        12.92        12.00        24.00        24.03 
TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2893 
        7.04         5.95        10.98         9.99        30.97         6.97 
TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 
        5.92         5.03         7.00         7.99        12.92        22.06 
TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2908 
        6.02         1.91        16.96        52.93        18.97         1.02 
TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2914 TCGA-AB-2916 
        0.99        38.99         9.01        39.98        26.04        29.00 
TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 
       39.98         2.01        12.03         1.02         2.96         7.96 
TCGA-AB-2926 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 
       14.99         1.94         4.04         4.01         0.92         1.97 
TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2945 
        1.94         7.07         9.96        14.96        21.07         7.99 
TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2954 
        1.02        19.07        22.98        10.06         1.02        49.05 
TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2963 TCGA-AB-2964 
       16.08         6.02        19.99        16.08        53.95        41.98 
TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2970 
       11.01        28.08        34.03        15.06        37.05        10.03 
TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2977 
       26.04         0.99        20.02         3.02        30.08         0.99 
TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 
       22.98        22.06        22.98        16.01         4.90        11.01 
TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 
       38.01         8.98         6.97         6.05         0.99        12.00 
TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 
       15.02        60.03        56.09        25.02        59.11        50.99 
TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 
       51.98         1.02        57.01        41.06        51.98        47.05 
TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 
       69.01        15.91        51.98        27.02        18.94        61.97 
TCGA-AB-3012 
       62.04 

  ASXL1 MUTATED ASXL1 WILD-TYPE 
           2.93            0.92 
  ASXL1 MUTATED ASXL1 WILD-TYPE 
          26.99           94.06 
  ASXL1 MUTATED ASXL1 WILD-TYPE 
         12.445          12.030 
[1] "2.9 - 27.0 (12.4)" "0.9 - 94.1 (12.0)"
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"ASXL1 WILD-TYPE"   "ASXL1 MUTATED" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"ASXL1 WILD-TYPE"   "ASXL1 MUTATED" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE"   "ASXL1 MUTATED" "ASXL1 WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE"   "ASXL1 MUTATED" "ASXL1 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-3012 
"ASXL1 WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"ASXL1 WILD-TYPE"   "ASXL1 MUTATED" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"ASXL1 WILD-TYPE"   "ASXL1 MUTATED" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE"   "ASXL1 MUTATED" "ASXL1 WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE"   "ASXL1 MUTATED" "ASXL1 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-3012 
"ASXL1 WILD-TYPE" 
     TCGA-AB-2802      TCGA-AB-2803      TCGA-AB-2804      TCGA-AB-2805 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2806      TCGA-AB-2807      TCGA-AB-2808      TCGA-AB-2809 
"ASXL1 WILD-TYPE"   "ASXL1 MUTATED" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2810      TCGA-AB-2811      TCGA-AB-2812      TCGA-AB-2813 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2814      TCGA-AB-2816      TCGA-AB-2817      TCGA-AB-2818 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2819      TCGA-AB-2821      TCGA-AB-2822      TCGA-AB-2824 
"ASXL1 WILD-TYPE"   "ASXL1 MUTATED" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2825      TCGA-AB-2826      TCGA-AB-2827      TCGA-AB-2828 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2829      TCGA-AB-2830      TCGA-AB-2831      TCGA-AB-2832 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2833      TCGA-AB-2834      TCGA-AB-2835      TCGA-AB-2836 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2838      TCGA-AB-2839      TCGA-AB-2840      TCGA-AB-2841 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2843      TCGA-AB-2844      TCGA-AB-2845      TCGA-AB-2846 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2847      TCGA-AB-2848      TCGA-AB-2849      TCGA-AB-2850 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2851      TCGA-AB-2853      TCGA-AB-2854      TCGA-AB-2855 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2857      TCGA-AB-2858      TCGA-AB-2859      TCGA-AB-2860 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2862      TCGA-AB-2863      TCGA-AB-2864      TCGA-AB-2865 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE"   "ASXL1 MUTATED" "ASXL1 WILD-TYPE" 
     TCGA-AB-2866      TCGA-AB-2867      TCGA-AB-2868      TCGA-AB-2869 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2870      TCGA-AB-2871      TCGA-AB-2872      TCGA-AB-2873 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2874      TCGA-AB-2875      TCGA-AB-2876      TCGA-AB-2877 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2878      TCGA-AB-2879      TCGA-AB-2880      TCGA-AB-2881 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2882      TCGA-AB-2883      TCGA-AB-2884      TCGA-AB-2885 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2886      TCGA-AB-2888      TCGA-AB-2889      TCGA-AB-2892 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2893      TCGA-AB-2894      TCGA-AB-2895      TCGA-AB-2896 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2897      TCGA-AB-2898      TCGA-AB-2899      TCGA-AB-2900 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2901      TCGA-AB-2904      TCGA-AB-2905      TCGA-AB-2906 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2908      TCGA-AB-2909      TCGA-AB-2911      TCGA-AB-2912 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2913      TCGA-AB-2914      TCGA-AB-2916      TCGA-AB-2917 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2919      TCGA-AB-2920      TCGA-AB-2923      TCGA-AB-2924 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2925      TCGA-AB-2926      TCGA-AB-2927      TCGA-AB-2928 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE"   "ASXL1 MUTATED" "ASXL1 WILD-TYPE" 
     TCGA-AB-2929      TCGA-AB-2933      TCGA-AB-2934      TCGA-AB-2935 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2936      TCGA-AB-2937      TCGA-AB-2938      TCGA-AB-2939 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2942      TCGA-AB-2945      TCGA-AB-2947      TCGA-AB-2948 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2949      TCGA-AB-2950      TCGA-AB-2952      TCGA-AB-2954 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2955      TCGA-AB-2956      TCGA-AB-2957      TCGA-AB-2959 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2963      TCGA-AB-2964      TCGA-AB-2965      TCGA-AB-2966 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2967      TCGA-AB-2968      TCGA-AB-2969      TCGA-AB-2970 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2971      TCGA-AB-2972      TCGA-AB-2973      TCGA-AB-2974 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2976      TCGA-AB-2977      TCGA-AB-2978      TCGA-AB-2979 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2980      TCGA-AB-2981      TCGA-AB-2982      TCGA-AB-2983 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2984      TCGA-AB-2985      TCGA-AB-2986      TCGA-AB-2987 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2988      TCGA-AB-2989      TCGA-AB-2990      TCGA-AB-2991 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2992      TCGA-AB-2993      TCGA-AB-2994      TCGA-AB-2995 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-2996      TCGA-AB-2998      TCGA-AB-2999      TCGA-AB-3000 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-3001      TCGA-AB-3002      TCGA-AB-3005      TCGA-AB-3006 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-3007      TCGA-AB-3008      TCGA-AB-3009      TCGA-AB-3011 
"ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" "ASXL1 WILD-TYPE" 
     TCGA-AB-3012 
"ASXL1 WILD-TYPE" 
[1] "hr=" "1.9"
D22V2, continuous
D22V3, binary
                 cls
clus                0   1
  ASXL1 MUTATED     3   2
  ASXL1 WILD-TYPE  88 104
[1] "tbl2"
                 cls
clus              [,1] [,2]
  ASXL1 MUTATED      3    2
  ASXL1 WILD-TYPE   88  104
        clus
vv       ASXL1 MUTATED ASXL1 WILD-TYPE
  FEMALE             3              88
  MALE               2             104

Clustering(23) Variable = PHACTR1 MUTATION ANALYSIS
D23V1, survival
                   sevent
clus2                 0   1
  PHACTR1 MUTATED     2   1
  PHACTR1 WILD-TYPE  63 107
  PHACTR1 MUTATED PHACTR1 WILD-TYPE 
                3               170 
  PHACTR1 MUTATED PHACTR1 WILD-TYPE 
                1               107 
$`PHACTR1 MUTATED`
TCGA-AB-2868 TCGA-AB-2876 TCGA-AB-2916 
        4.96        40.08        29.00 

$`PHACTR1 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
       94.06         2.04         1.02         7.99        12.03         1.02 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 
       26.04         8.05         8.98         9.96        82.06        26.99 
TCGA-AB-2822 TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 
       31.96         0.99         6.94        24.03         8.98        75.09 
TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 
        8.98         9.04        21.04        12.00        14.99         8.05 
TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 
       55.00        17.00        12.00        15.98         0.92        46.06 
TCGA-AB-2843 TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 
        7.07         3.98         9.96        46.09        19.96        14.96 
TCGA-AB-2849 TCGA-AB-2850 TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 
       72.99         1.97         7.96         2.89        12.03         6.94 
TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 
       10.06        18.94         9.96        14.01        47.01         1.02 
TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2869 TCGA-AB-2870 
       18.97         2.01         5.00         6.05         7.99         5.00 
TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2877 
        5.03        20.98         8.98        13.02         6.97        20.98 
TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 
       12.00         8.05        13.94        12.92        12.00        24.00 
TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 
       24.03         7.04         5.95        10.98         9.99        30.97 
TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 
        6.97         5.92         5.03         7.00         7.99        12.92 
TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 TCGA-AB-2906 
       22.06         6.02         1.91        16.96        52.93        18.97 
TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2914 
        1.02         0.99        38.99         9.01        39.98        26.04 
TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 
       39.98         2.01        12.03         1.02         2.96         7.96 
TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 
       14.99         2.93         1.94         4.04         4.01         0.92 
TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2942 
        1.97         1.94         7.07         9.96        14.96        21.07 
TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 TCGA-AB-2952 
        7.99         1.02        19.07        22.98        10.06         1.02 
TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2963 
       49.05        16.08         6.02        19.99        16.08        53.95 
TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2969 
       41.98        11.01        28.08        34.03        15.06        37.05 
TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2976 
       10.03        26.04         0.99        20.02         3.02        30.08 
TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 
        0.99        22.98        22.06        22.98        16.01         4.90 
TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 
       11.01        38.01         8.98         6.97         6.05         0.99 
TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 
       12.00        15.02        60.03        56.09        25.02        59.11 
TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 
       50.99        51.98         1.02        57.01        41.06        51.98 
TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 
       47.05        69.01        15.91        51.98        27.02        18.94 
TCGA-AB-3011 TCGA-AB-3012 
       61.97        62.04 

  PHACTR1 MUTATED PHACTR1 WILD-TYPE 
             4.96              0.92 
  PHACTR1 MUTATED PHACTR1 WILD-TYPE 
            40.08             94.06 
  PHACTR1 MUTATED PHACTR1 WILD-TYPE 
            29.00             12.03 
[1] "5.0 - 40.1 (29.0)" "0.9 - 94.1 (12.0)"
       TCGA-AB-2802        TCGA-AB-2803        TCGA-AB-2804        TCGA-AB-2805 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2806        TCGA-AB-2807        TCGA-AB-2808        TCGA-AB-2809 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2810        TCGA-AB-2811        TCGA-AB-2812        TCGA-AB-2813 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2814        TCGA-AB-2816        TCGA-AB-2817        TCGA-AB-2818 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2819        TCGA-AB-2821        TCGA-AB-2822        TCGA-AB-2824 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2825        TCGA-AB-2826        TCGA-AB-2827        TCGA-AB-2828 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2829        TCGA-AB-2830        TCGA-AB-2831        TCGA-AB-2832 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2833        TCGA-AB-2834        TCGA-AB-2835        TCGA-AB-2836 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2838        TCGA-AB-2839        TCGA-AB-2840        TCGA-AB-2841 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2843        TCGA-AB-2844        TCGA-AB-2845        TCGA-AB-2846 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2847        TCGA-AB-2848        TCGA-AB-2849        TCGA-AB-2850 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2851        TCGA-AB-2853        TCGA-AB-2854        TCGA-AB-2855 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2857        TCGA-AB-2858        TCGA-AB-2859        TCGA-AB-2860 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2862        TCGA-AB-2863        TCGA-AB-2864        TCGA-AB-2865 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2866        TCGA-AB-2867        TCGA-AB-2868        TCGA-AB-2869 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE"   "PHACTR1 MUTATED" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2870        TCGA-AB-2871        TCGA-AB-2872        TCGA-AB-2873 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2874        TCGA-AB-2875        TCGA-AB-2876        TCGA-AB-2877 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE"   "PHACTR1 MUTATED" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2878        TCGA-AB-2879        TCGA-AB-2880        TCGA-AB-2881 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2882        TCGA-AB-2883        TCGA-AB-2884        TCGA-AB-2885 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2886        TCGA-AB-2888        TCGA-AB-2889        TCGA-AB-2892 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2893        TCGA-AB-2894        TCGA-AB-2895        TCGA-AB-2896 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2897        TCGA-AB-2898        TCGA-AB-2899        TCGA-AB-2900 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2901        TCGA-AB-2904        TCGA-AB-2905        TCGA-AB-2906 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2908        TCGA-AB-2909        TCGA-AB-2911        TCGA-AB-2912 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2913        TCGA-AB-2914        TCGA-AB-2916        TCGA-AB-2917 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE"   "PHACTR1 MUTATED" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2919        TCGA-AB-2920        TCGA-AB-2923        TCGA-AB-2924 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2925        TCGA-AB-2926        TCGA-AB-2927        TCGA-AB-2928 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2929        TCGA-AB-2933        TCGA-AB-2934        TCGA-AB-2935 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2936        TCGA-AB-2937        TCGA-AB-2938        TCGA-AB-2939 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2942        TCGA-AB-2945        TCGA-AB-2947        TCGA-AB-2948 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2949        TCGA-AB-2950        TCGA-AB-2952        TCGA-AB-2954 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2955        TCGA-AB-2956        TCGA-AB-2957        TCGA-AB-2959 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2963        TCGA-AB-2964        TCGA-AB-2965        TCGA-AB-2966 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2967        TCGA-AB-2968        TCGA-AB-2969        TCGA-AB-2970 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2971        TCGA-AB-2972        TCGA-AB-2973        TCGA-AB-2974 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2976        TCGA-AB-2977        TCGA-AB-2978        TCGA-AB-2979 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2980        TCGA-AB-2981        TCGA-AB-2982        TCGA-AB-2983 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2984        TCGA-AB-2985        TCGA-AB-2986        TCGA-AB-2987 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2988        TCGA-AB-2989        TCGA-AB-2990        TCGA-AB-2991 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2992        TCGA-AB-2993        TCGA-AB-2994        TCGA-AB-2995 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2996        TCGA-AB-2998        TCGA-AB-2999        TCGA-AB-3000 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-3001        TCGA-AB-3002        TCGA-AB-3005        TCGA-AB-3006 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-3007        TCGA-AB-3008        TCGA-AB-3009        TCGA-AB-3011 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-3012 
"PHACTR1 WILD-TYPE" 
       TCGA-AB-2802        TCGA-AB-2803        TCGA-AB-2804        TCGA-AB-2805 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2806        TCGA-AB-2807        TCGA-AB-2808        TCGA-AB-2809 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2810        TCGA-AB-2811        TCGA-AB-2812        TCGA-AB-2813 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2814        TCGA-AB-2816        TCGA-AB-2817        TCGA-AB-2818 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2819        TCGA-AB-2821        TCGA-AB-2822        TCGA-AB-2824 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2825        TCGA-AB-2826        TCGA-AB-2827        TCGA-AB-2828 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2829        TCGA-AB-2830        TCGA-AB-2831        TCGA-AB-2832 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2833        TCGA-AB-2834        TCGA-AB-2835        TCGA-AB-2836 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2838        TCGA-AB-2839        TCGA-AB-2840        TCGA-AB-2841 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2843        TCGA-AB-2844        TCGA-AB-2845        TCGA-AB-2846 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2847        TCGA-AB-2848        TCGA-AB-2849        TCGA-AB-2850 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2851        TCGA-AB-2853        TCGA-AB-2854        TCGA-AB-2855 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2857        TCGA-AB-2858        TCGA-AB-2859        TCGA-AB-2860 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2862        TCGA-AB-2863        TCGA-AB-2864        TCGA-AB-2865 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2866        TCGA-AB-2867        TCGA-AB-2868        TCGA-AB-2869 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE"   "PHACTR1 MUTATED" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2870        TCGA-AB-2871        TCGA-AB-2872        TCGA-AB-2873 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2874        TCGA-AB-2875        TCGA-AB-2876        TCGA-AB-2877 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE"   "PHACTR1 MUTATED" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2878        TCGA-AB-2879        TCGA-AB-2880        TCGA-AB-2881 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2882        TCGA-AB-2883        TCGA-AB-2884        TCGA-AB-2885 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2886        TCGA-AB-2888        TCGA-AB-2889        TCGA-AB-2892 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2893        TCGA-AB-2894        TCGA-AB-2895        TCGA-AB-2896 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2897        TCGA-AB-2898        TCGA-AB-2899        TCGA-AB-2900 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2901        TCGA-AB-2904        TCGA-AB-2905        TCGA-AB-2906 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2908        TCGA-AB-2909        TCGA-AB-2911        TCGA-AB-2912 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2913        TCGA-AB-2914        TCGA-AB-2916        TCGA-AB-2917 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE"   "PHACTR1 MUTATED" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2919        TCGA-AB-2920        TCGA-AB-2923        TCGA-AB-2924 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2925        TCGA-AB-2926        TCGA-AB-2927        TCGA-AB-2928 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2929        TCGA-AB-2933        TCGA-AB-2934        TCGA-AB-2935 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2936        TCGA-AB-2937        TCGA-AB-2938        TCGA-AB-2939 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2942        TCGA-AB-2945        TCGA-AB-2947        TCGA-AB-2948 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2949        TCGA-AB-2950        TCGA-AB-2952        TCGA-AB-2954 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2955        TCGA-AB-2956        TCGA-AB-2957        TCGA-AB-2959 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2963        TCGA-AB-2964        TCGA-AB-2965        TCGA-AB-2966 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2967        TCGA-AB-2968        TCGA-AB-2969        TCGA-AB-2970 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2971        TCGA-AB-2972        TCGA-AB-2973        TCGA-AB-2974 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2976        TCGA-AB-2977        TCGA-AB-2978        TCGA-AB-2979 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2980        TCGA-AB-2981        TCGA-AB-2982        TCGA-AB-2983 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2984        TCGA-AB-2985        TCGA-AB-2986        TCGA-AB-2987 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2988        TCGA-AB-2989        TCGA-AB-2990        TCGA-AB-2991 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2992        TCGA-AB-2993        TCGA-AB-2994        TCGA-AB-2995 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2996        TCGA-AB-2998        TCGA-AB-2999        TCGA-AB-3000 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-3001        TCGA-AB-3002        TCGA-AB-3005        TCGA-AB-3006 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-3007        TCGA-AB-3008        TCGA-AB-3009        TCGA-AB-3011 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-3012 
"PHACTR1 WILD-TYPE" 
       TCGA-AB-2802        TCGA-AB-2803        TCGA-AB-2804        TCGA-AB-2805 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2806        TCGA-AB-2807        TCGA-AB-2808        TCGA-AB-2809 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2810        TCGA-AB-2811        TCGA-AB-2812        TCGA-AB-2813 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2814        TCGA-AB-2816        TCGA-AB-2817        TCGA-AB-2818 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2819        TCGA-AB-2821        TCGA-AB-2822        TCGA-AB-2824 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2825        TCGA-AB-2826        TCGA-AB-2827        TCGA-AB-2828 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2829        TCGA-AB-2830        TCGA-AB-2831        TCGA-AB-2832 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2833        TCGA-AB-2834        TCGA-AB-2835        TCGA-AB-2836 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2838        TCGA-AB-2839        TCGA-AB-2840        TCGA-AB-2841 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2843        TCGA-AB-2844        TCGA-AB-2845        TCGA-AB-2846 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2847        TCGA-AB-2848        TCGA-AB-2849        TCGA-AB-2850 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2851        TCGA-AB-2853        TCGA-AB-2854        TCGA-AB-2855 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2857        TCGA-AB-2858        TCGA-AB-2859        TCGA-AB-2860 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2862        TCGA-AB-2863        TCGA-AB-2864        TCGA-AB-2865 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2866        TCGA-AB-2867        TCGA-AB-2868        TCGA-AB-2869 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE"   "PHACTR1 MUTATED" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2870        TCGA-AB-2871        TCGA-AB-2872        TCGA-AB-2873 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2874        TCGA-AB-2875        TCGA-AB-2876        TCGA-AB-2877 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE"   "PHACTR1 MUTATED" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2878        TCGA-AB-2879        TCGA-AB-2880        TCGA-AB-2881 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2882        TCGA-AB-2883        TCGA-AB-2884        TCGA-AB-2885 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2886        TCGA-AB-2888        TCGA-AB-2889        TCGA-AB-2892 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2893        TCGA-AB-2894        TCGA-AB-2895        TCGA-AB-2896 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2897        TCGA-AB-2898        TCGA-AB-2899        TCGA-AB-2900 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2901        TCGA-AB-2904        TCGA-AB-2905        TCGA-AB-2906 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2908        TCGA-AB-2909        TCGA-AB-2911        TCGA-AB-2912 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2913        TCGA-AB-2914        TCGA-AB-2916        TCGA-AB-2917 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE"   "PHACTR1 MUTATED" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2919        TCGA-AB-2920        TCGA-AB-2923        TCGA-AB-2924 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2925        TCGA-AB-2926        TCGA-AB-2927        TCGA-AB-2928 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2929        TCGA-AB-2933        TCGA-AB-2934        TCGA-AB-2935 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2936        TCGA-AB-2937        TCGA-AB-2938        TCGA-AB-2939 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2942        TCGA-AB-2945        TCGA-AB-2947        TCGA-AB-2948 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2949        TCGA-AB-2950        TCGA-AB-2952        TCGA-AB-2954 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2955        TCGA-AB-2956        TCGA-AB-2957        TCGA-AB-2959 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2963        TCGA-AB-2964        TCGA-AB-2965        TCGA-AB-2966 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2967        TCGA-AB-2968        TCGA-AB-2969        TCGA-AB-2970 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2971        TCGA-AB-2972        TCGA-AB-2973        TCGA-AB-2974 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2976        TCGA-AB-2977        TCGA-AB-2978        TCGA-AB-2979 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2980        TCGA-AB-2981        TCGA-AB-2982        TCGA-AB-2983 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2984        TCGA-AB-2985        TCGA-AB-2986        TCGA-AB-2987 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2988        TCGA-AB-2989        TCGA-AB-2990        TCGA-AB-2991 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2992        TCGA-AB-2993        TCGA-AB-2994        TCGA-AB-2995 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-2996        TCGA-AB-2998        TCGA-AB-2999        TCGA-AB-3000 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-3001        TCGA-AB-3002        TCGA-AB-3005        TCGA-AB-3006 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-3007        TCGA-AB-3008        TCGA-AB-3009        TCGA-AB-3011 
"PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" "PHACTR1 WILD-TYPE" 
       TCGA-AB-3012 
"PHACTR1 WILD-TYPE" 
[1] "hr=" "2.4"
D23V2, continuous
D23V3, binary
                   cls
clus                  0   1
  PHACTR1 MUTATED     2   1
  PHACTR1 WILD-TYPE  89 105
[1] "tbl2"
                   cls
clus                [,1] [,2]
  PHACTR1 MUTATED      2    1
  PHACTR1 WILD-TYPE   89  105
        clus
vv       PHACTR1 MUTATED PHACTR1 WILD-TYPE
  FEMALE               2                89
  MALE                 1               105

Clustering(24) Variable = DIS3 MUTATION ANALYSIS
D24V1, survival
                sevent
clus2              0   1
  DIS3 MUTATED     0   2
  DIS3 WILD-TYPE  65 106
  DIS3 MUTATED DIS3 WILD-TYPE 
             2            171 
  DIS3 MUTATED DIS3 WILD-TYPE 
             2            106 
$`DIS3 MUTATED`
TCGA-AB-2865 TCGA-AB-2927 
        2.01         2.93 

$`DIS3 WILD-TYPE`
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
       12.00        26.04        84.03        18.94        31.04         5.92 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
       94.06         2.04         1.02         7.99        12.03         1.02 
TCGA-AB-2814 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 
       26.04         8.05         8.98         9.96        82.06        26.99 
TCGA-AB-2822 TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 
       31.96         0.99         6.94        24.03         8.98        75.09 
TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 
        8.98         9.04        21.04        12.00        14.99         8.05 
TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 
       55.00        17.00        12.00        15.98         0.92        46.06 
TCGA-AB-2843 TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 
        7.07         3.98         9.96        46.09        19.96        14.96 
TCGA-AB-2849 TCGA-AB-2850 TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 
       72.99         1.97         7.96         2.89        12.03         6.94 
TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 
       10.06        18.94         9.96        14.01        47.01         1.02 
TCGA-AB-2864 TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 
       18.97         5.00         6.05         4.96         7.99         5.00 
TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 
        5.03        20.98         8.98        13.02         6.97        40.08 
TCGA-AB-2877 TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 
       20.98        12.00         8.05        13.94        12.92        12.00 
TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 
       24.00        24.03         7.04         5.95        10.98         9.99 
TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 
       30.97         6.97         5.92         5.03         7.00         7.99 
TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2904 TCGA-AB-2905 
       12.92        22.06         6.02         1.91        16.96        52.93 
TCGA-AB-2906 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 
       18.97         1.02         0.99        38.99         9.01        39.98 
TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 
       26.04        29.00        39.98         2.01        12.03         1.02 
TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 
        2.96         7.96        14.99         1.94         4.04         4.01 
TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 
        0.92         1.97         1.94         7.07         9.96        14.96 
TCGA-AB-2942 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 
       21.07         7.99         1.02        19.07        22.98        10.06 
TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 
        1.02        49.05        16.08         6.02        19.99        16.08 
TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 
       53.95        41.98        11.01        28.08        34.03        15.06 
TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 
       37.05        10.03        26.04         0.99        20.02         3.02 
TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 
       30.08         0.99        22.98        22.06        22.98        16.01 
TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 
        4.90        11.01        38.01         8.98         6.97         6.05 
TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 
        0.99        12.00        15.02        60.03        56.09        25.02 
TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 
       59.11        50.99        51.98         1.02        57.01        41.06 
TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 
       51.98        47.05        69.01        15.91        51.98        27.02 
TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       18.94        61.97        62.04 

  DIS3 MUTATED DIS3 WILD-TYPE 
          2.01           0.92 
  DIS3 MUTATED DIS3 WILD-TYPE 
          2.93          94.06 
  DIS3 MUTATED DIS3 WILD-TYPE 
          2.47          12.03 
[1] "2.0 - 2.9 (2.5)"   "0.9 - 94.1 (12.0)"
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE"   "DIS3 MUTATED" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE"   "DIS3 MUTATED" "DIS3 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-3012 
"DIS3 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE"   "DIS3 MUTATED" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE"   "DIS3 MUTATED" "DIS3 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-3012 
"DIS3 WILD-TYPE" 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2865 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE"   "DIS3 MUTATED" 
    TCGA-AB-2866     TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2870     TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2874     TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2878     TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2882     TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2886     TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2893     TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2897     TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2901     TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2908     TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2913     TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2919     TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2925     TCGA-AB-2926     TCGA-AB-2927     TCGA-AB-2928 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE"   "DIS3 MUTATED" "DIS3 WILD-TYPE" 
    TCGA-AB-2929     TCGA-AB-2933     TCGA-AB-2934     TCGA-AB-2935 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2936     TCGA-AB-2937     TCGA-AB-2938     TCGA-AB-2939 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2942     TCGA-AB-2945     TCGA-AB-2947     TCGA-AB-2948 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2949     TCGA-AB-2950     TCGA-AB-2952     TCGA-AB-2954 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2955     TCGA-AB-2956     TCGA-AB-2957     TCGA-AB-2959 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2963     TCGA-AB-2964     TCGA-AB-2965     TCGA-AB-2966 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2967     TCGA-AB-2968     TCGA-AB-2969     TCGA-AB-2970 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2971     TCGA-AB-2972     TCGA-AB-2973     TCGA-AB-2974 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2976     TCGA-AB-2977     TCGA-AB-2978     TCGA-AB-2979 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2980     TCGA-AB-2981     TCGA-AB-2982     TCGA-AB-2983 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2984     TCGA-AB-2985     TCGA-AB-2986     TCGA-AB-2987 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2988     TCGA-AB-2989     TCGA-AB-2990     TCGA-AB-2991 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2992     TCGA-AB-2993     TCGA-AB-2994     TCGA-AB-2995 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2996     TCGA-AB-2998     TCGA-AB-2999     TCGA-AB-3000 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-3001     TCGA-AB-3002     TCGA-AB-3005     TCGA-AB-3006 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-3007     TCGA-AB-3008     TCGA-AB-3009     TCGA-AB-3011 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-3012 
"DIS3 WILD-TYPE" 
[1] "Remove cluster labels:" "DIS3 MUTATED"          
clus
  DIS3 MUTATED DIS3 WILD-TYPE 
             2            171 
    TCGA-AB-2802     TCGA-AB-2803     TCGA-AB-2804     TCGA-AB-2805 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2806     TCGA-AB-2807     TCGA-AB-2808     TCGA-AB-2809 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2810     TCGA-AB-2811     TCGA-AB-2812     TCGA-AB-2813 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2814     TCGA-AB-2816     TCGA-AB-2817     TCGA-AB-2818 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2819     TCGA-AB-2821     TCGA-AB-2822     TCGA-AB-2824 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2825     TCGA-AB-2826     TCGA-AB-2827     TCGA-AB-2828 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2829     TCGA-AB-2830     TCGA-AB-2831     TCGA-AB-2832 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2833     TCGA-AB-2834     TCGA-AB-2835     TCGA-AB-2836 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2838     TCGA-AB-2839     TCGA-AB-2840     TCGA-AB-2841 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2843     TCGA-AB-2844     TCGA-AB-2845     TCGA-AB-2846 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2847     TCGA-AB-2848     TCGA-AB-2849     TCGA-AB-2850 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2851     TCGA-AB-2853     TCGA-AB-2854     TCGA-AB-2855 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2857     TCGA-AB-2858     TCGA-AB-2859     TCGA-AB-2860 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2862     TCGA-AB-2863     TCGA-AB-2864     TCGA-AB-2866 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2867     TCGA-AB-2868     TCGA-AB-2869     TCGA-AB-2870 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2871     TCGA-AB-2872     TCGA-AB-2873     TCGA-AB-2874 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2875     TCGA-AB-2876     TCGA-AB-2877     TCGA-AB-2878 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2879     TCGA-AB-2880     TCGA-AB-2881     TCGA-AB-2882 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2883     TCGA-AB-2884     TCGA-AB-2885     TCGA-AB-2886 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2888     TCGA-AB-2889     TCGA-AB-2892     TCGA-AB-2893 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2894     TCGA-AB-2895     TCGA-AB-2896     TCGA-AB-2897 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2898     TCGA-AB-2899     TCGA-AB-2900     TCGA-AB-2901 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2904     TCGA-AB-2905     TCGA-AB-2906     TCGA-AB-2908 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2909     TCGA-AB-2911     TCGA-AB-2912     TCGA-AB-2913 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2914     TCGA-AB-2916     TCGA-AB-2917     TCGA-AB-2919 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2920     TCGA-AB-2923     TCGA-AB-2924     TCGA-AB-2925 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2926     TCGA-AB-2928     TCGA-AB-2929     TCGA-AB-2933 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2934     TCGA-AB-2935     TCGA-AB-2936     TCGA-AB-2937 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2938     TCGA-AB-2939     TCGA-AB-2942     TCGA-AB-2945 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2947     TCGA-AB-2948     TCGA-AB-2949     TCGA-AB-2950 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2952     TCGA-AB-2954     TCGA-AB-2955     TCGA-AB-2956 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2957     TCGA-AB-2959     TCGA-AB-2963     TCGA-AB-2964 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2965     TCGA-AB-2966     TCGA-AB-2967     TCGA-AB-2968 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2969     TCGA-AB-2970     TCGA-AB-2971     TCGA-AB-2972 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2973     TCGA-AB-2974     TCGA-AB-2976     TCGA-AB-2977 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2978     TCGA-AB-2979     TCGA-AB-2980     TCGA-AB-2981 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2982     TCGA-AB-2983     TCGA-AB-2984     TCGA-AB-2985 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2986     TCGA-AB-2987     TCGA-AB-2988     TCGA-AB-2989 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2990     TCGA-AB-2991     TCGA-AB-2992     TCGA-AB-2993 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2994     TCGA-AB-2995     TCGA-AB-2996     TCGA-AB-2998 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-2999     TCGA-AB-3000     TCGA-AB-3001     TCGA-AB-3002 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-3005     TCGA-AB-3006     TCGA-AB-3007     TCGA-AB-3008 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
    TCGA-AB-3009     TCGA-AB-3011     TCGA-AB-3012 
"DIS3 WILD-TYPE" "DIS3 WILD-TYPE" "DIS3 WILD-TYPE" 
D24V2, continuous
D24V3, binary
                cls
clus               0   1
  DIS3 MUTATED     2   1
  DIS3 WILD-TYPE  89 105
[1] "tbl2"
                cls
clus             [,1] [,2]
  DIS3 MUTATED      2    1
  DIS3 WILD-TYPE   89  105
        clus
vv       DIS3 MUTATED DIS3 WILD-TYPE
  FEMALE            2             89
  MALE              1            105
           V1.D              V2              V3 
"Time to Death"           "AGE"        "GENDER" 
> q(save="no")
