
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/335235/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/LUAD-TP/2666818/1.GDAC_mergedClustering.Finished/LUAD-TP.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=LUAD-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=LUAD-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=408, in cluster file=403, common to both=403
[1]  77 403
[1] "Amp Peak  1(1p34.3) mutation analysis"
[1] 3
  AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE 
                          111                           292 
  AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE 
                          111                           292 
[1] "Amp Peak  2(1p22.3) mutation analysis"
[1] 3
  AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE 
                          106                           297 
  AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE 
                          106                           297 
[1] "Amp Peak  3(1q21.3) mutation analysis"
[1] 3
  AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE 
                          285                           118 
  AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE 
                          285                           118 
[1] "Amp Peak  4(3q26.2) mutation analysis"
[1] 3
  AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE 
                          141                           262 
  AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE 
                          141                           262 
[1] "Amp Peak  5(4q12) mutation analysis"
[1] 3
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                         76                         327 
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                         76                         327 
[1] "Amp Peak  6(5p15.33) mutation analysis"
[1] 3
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                           260                            143 
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                           260                            143 
[1] "Amp Peak  7(5p13.1) mutation analysis"
[1] 3
  AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE 
                          235                           168 
  AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE 
                          235                           168 
[1] "Amp Peak  8(5q35.1) mutation analysis"
[1] 3
  AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE 
                           91                           312 
  AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE 
                           91                           312 
[1] "Amp Peak  9(6p25.3) mutation analysis"
[1] 3
  AMP PEAK  9(6P25.3) MUTATED AMP PEAK  9(6P25.3) WILD-TYPE 
                          159                           244 
  AMP PEAK  9(6P25.3) MUTATED AMP PEAK  9(6P25.3) WILD-TYPE 
                          159                           244 
[1] "Amp Peak 10(6p21.1) mutation analysis"
[1] 3
  AMP PEAK 10(6P21.1) MUTATED AMP PEAK 10(6P21.1) WILD-TYPE 
                          151                           252 
  AMP PEAK 10(6P21.1) MUTATED AMP PEAK 10(6P21.1) WILD-TYPE 
                          151                           252 
[1] "Amp Peak 11(7p21.1) mutation analysis"
[1] 3
  AMP PEAK 11(7P21.1) MUTATED AMP PEAK 11(7P21.1) WILD-TYPE 
                          220                           183 
  AMP PEAK 11(7P21.1) MUTATED AMP PEAK 11(7P21.1) WILD-TYPE 
                          220                           183 
[1] "Amp Peak 12(7p11.2) mutation analysis"
[1] 3
  AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE 
                          210                           193 
  AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE 
                          210                           193 
[1] "Amp Peak 13(7q31.2) mutation analysis"
[1] 3
  AMP PEAK 13(7Q31.2) MUTATED AMP PEAK 13(7Q31.2) WILD-TYPE 
                          172                           231 
  AMP PEAK 13(7Q31.2) MUTATED AMP PEAK 13(7Q31.2) WILD-TYPE 
                          172                           231 
[1] "Amp Peak 14(8p11.21) mutation analysis"
[1] 3
  AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE 
                           123                            280 
  AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE 
                           123                            280 
[1] "Amp Peak 15(8q11.1) mutation analysis"
[1] 3
  AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE 
                          182                           221 
  AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE 
                          182                           221 
[1] "Amp Peak 16(8q24.21) mutation analysis"
[1] 3
  AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE 
                           251                            152 
  AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE 
                           251                            152 
[1] "Amp Peak 17(10p15.1) mutation analysis"
[1] 3
  AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE 
                           108                            295 
  AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE 
                           108                            295 
[1] "Amp Peak 18(11q13.3) mutation analysis"
[1] 3
  AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE 
                           137                            266 
  AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE 
                           137                            266 
[1] "Amp Peak 19(12p12.1) mutation analysis"
[1] 3
  AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE 
                           140                            263 
  AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE 
                           140                            263 
[1] "Amp Peak 20(12q14.1) mutation analysis"
[1] 3
  AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE 
                           125                            278 
  AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE 
                           125                            278 
[1] "Amp Peak 21(12q15) mutation analysis"
[1] 3
  AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE 
                         129                          274 
  AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE 
                         129                          274 
[1] "Amp Peak 22(13q33.3) mutation analysis"
[1] 3
  AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE 
                            62                            341 
  AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE 
                            62                            341 
[1] "Amp Peak 23(14q13.3) mutation analysis"
[1] 3
  AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE 
                           180                            223 
  AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE 
                           180                            223 
[1] "Amp Peak 24(17q12) mutation analysis"
[1] 3
  AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE 
                         180                          223 
  AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE 
                         180                          223 
[1] "Amp Peak 25(17q23.1) mutation analysis"
[1] 3
  AMP PEAK 25(17Q23.1) MUTATED AMP PEAK 25(17Q23.1) WILD-TYPE 
                           195                            208 
  AMP PEAK 25(17Q23.1) MUTATED AMP PEAK 25(17Q23.1) WILD-TYPE 
                           195                            208 
[1] "Amp Peak 26(18p11.32) mutation analysis"
[1] 3
  AMP PEAK 26(18P11.32) MUTATED AMP PEAK 26(18P11.32) WILD-TYPE 
                            103                             300 
  AMP PEAK 26(18P11.32) MUTATED AMP PEAK 26(18P11.32) WILD-TYPE 
                            103                             300 
[1] "Amp Peak 27(18q11.2) mutation analysis"
[1] 3
  AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE 
                            87                            316 
  AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE 
                            87                            316 
[1] "Amp Peak 28(19q12) mutation analysis"
[1] 3
  AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE 
                         110                          293 
  AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE 
                         110                          293 
[1] "Amp Peak 29(20q11.21) mutation analysis"
[1] 3
  AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE 
                            180                             223 
  AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE 
                            180                             223 
[1] "Amp Peak 30(20q13.33) mutation analysis"
[1] 3
  AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE 
                            195                             208 
  AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE 
                            195                             208 
[1] "Amp Peak 31(22q11.22) mutation analysis"
[1] 3
  AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE 
                             69                             334 
  AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE 
                             69                             334 
[1] "Amp Peak 32(Xq28) mutation analysis"
[1] 3
  AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE 
                        130                         273 
  AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE 
                        130                         273 
[1] "Del Peak  1(1p36.13) mutation analysis"
[1] 3
  DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE 
                            92                            311 
  DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE 
                            92                            311 
[1] "Del Peak  2(1p13.1) mutation analysis"
[1] 3
  DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE 
                          119                           284 
  DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE 
                          119                           284 
[1] "Del Peak  3(2q22.1) mutation analysis"
[1] 3
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                           41                           362 
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                           41                           362 
[1] "Del Peak  4(2q37.3) mutation analysis"
[1] 3
  DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE 
                           59                           344 
  DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE 
                           59                           344 
[1] "Del Peak  5(3p26.3) mutation analysis"
[1] 3
  DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE 
                          183                           220 
  DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE 
                          183                           220 
[1] "Del Peak  6(3p21.31) mutation analysis"
[1] 3
  DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE 
                           194                            209 
  DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE 
                           194                            209 
[1] "Del Peak  7(3q11.1) mutation analysis"
[1] 3
  DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE 
                          116                           287 
  DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE 
                          116                           287 
[1] "Del Peak  8(3q29) mutation analysis"
[1] 3
  DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE 
                        112                         291 
  DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE 
                        112                         291 
[1] "Del Peak  9(4p15.2) mutation analysis"
[1] 3
  DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE 
                           95                           308 
  DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE 
                           95                           308 
[1] "Del Peak 10(4q22.1) mutation analysis"
[1] 3
  DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE 
                          119                           284 
  DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE 
                          119                           284 
[1] "Del Peak 11(4q35.1) mutation analysis"
[1] 3
  DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE 
                          143                           260 
  DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE 
                          143                           260 
[1] "Del Peak 12(5q11.2) mutation analysis"
[1] 3
  DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE 
                          145                           258 
  DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE 
                          145                           258 
[1] "Del Peak 13(5q34) mutation analysis"
[1] 3
  DEL PEAK 13(5Q34) MUTATED DEL PEAK 13(5Q34) WILD-TYPE 
                        140                         263 
  DEL PEAK 13(5Q34) MUTATED DEL PEAK 13(5Q34) WILD-TYPE 
                        140                         263 
[1] "Del Peak 14(6q12) mutation analysis"
[1] 3
  DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE 
                        137                         266 
  DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE 
                        137                         266 
[1] "Del Peak 15(6q22.31) mutation analysis"
[1] 3
  DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE 
                           199                            204 
  DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE 
                           199                            204 
[1] "Del Peak 16(6q26) mutation analysis"
[1] 3
  DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE 
                        204                         199 
  DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE 
                        204                         199 
[1] "Del Peak 17(8p23.2) mutation analysis"
[1] 3
  DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE 
                          197                           206 
  DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE 
                          197                           206 
[1] "Del Peak 18(8p21.3) mutation analysis"
[1] 3
  DEL PEAK 18(8P21.3) MUTATED DEL PEAK 18(8P21.3) WILD-TYPE 
                          210                           193 
  DEL PEAK 18(8P21.3) MUTATED DEL PEAK 18(8P21.3) WILD-TYPE 
                          210                           193 
[1] "Del Peak 19(9p23) mutation analysis"
[1] 3
  DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE 
                        226                         177 
  DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE 
                        226                         177 
[1] "Del Peak 20(9p21.3) mutation analysis"
[1] 3
  DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE 
                          232                           171 
  DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE 
                          232                           171 
[1] "Del Peak 21(9q21.11) mutation analysis"
[1] 3
  DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE 
                           202                            201 
  DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE 
                           202                            201 
[1] "Del Peak 22(10p15.3) mutation analysis"
[1] 3
  DEL PEAK 22(10P15.3) MUTATED DEL PEAK 22(10P15.3) WILD-TYPE 
                            99                            304 
  DEL PEAK 22(10P15.3) MUTATED DEL PEAK 22(10P15.3) WILD-TYPE 
                            99                            304 
[1] "Del Peak 23(10q26.3) mutation analysis"
[1] 3
  DEL PEAK 23(10Q26.3) MUTATED DEL PEAK 23(10Q26.3) WILD-TYPE 
                           113                            290 
  DEL PEAK 23(10Q26.3) MUTATED DEL PEAK 23(10Q26.3) WILD-TYPE 
                           113                            290 
[1] "Del Peak 24(11p15.5) mutation analysis"
[1] 3
  DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE 
                           107                            296 
  DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE 
                           107                            296 
[1] "Del Peak 25(11q25) mutation analysis"
[1] 3
  DEL PEAK 25(11Q25) MUTATED DEL PEAK 25(11Q25) WILD-TYPE 
                          88                          315 
  DEL PEAK 25(11Q25) MUTATED DEL PEAK 25(11Q25) WILD-TYPE 
                          88                          315 
[1] "Del Peak 26(12p13.2) mutation analysis"
[1] 3
  DEL PEAK 26(12P13.2) MUTATED DEL PEAK 26(12P13.2) WILD-TYPE 
                           107                            296 
  DEL PEAK 26(12P13.2) MUTATED DEL PEAK 26(12P13.2) WILD-TYPE 
                           107                            296 
[1] "Del Peak 27(12q12) mutation analysis"
[1] 3
  DEL PEAK 27(12Q12) MUTATED DEL PEAK 27(12Q12) WILD-TYPE 
                          77                          326 
  DEL PEAK 27(12Q12) MUTATED DEL PEAK 27(12Q12) WILD-TYPE 
                          77                          326 
[1] "Del Peak 28(12q24.33) mutation analysis"
[1] 3
  DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE 
                             95                             308 
  DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE 
                             95                             308 
[1] "Del Peak 29(13q12.11) mutation analysis"
[1] 3
  DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE 
                            225                             178 
  DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE 
                            225                             178 
[1] "Del Peak 30(13q12.13) mutation analysis"
[1] 3
  DEL PEAK 30(13Q12.13) MUTATED DEL PEAK 30(13Q12.13) WILD-TYPE 
                            224                             179 
  DEL PEAK 30(13Q12.13) MUTATED DEL PEAK 30(13Q12.13) WILD-TYPE 
                            224                             179 
[1] "Del Peak 31(13q34) mutation analysis"
[1] 3
  DEL PEAK 31(13Q34) MUTATED DEL PEAK 31(13Q34) WILD-TYPE 
                         183                          220 
  DEL PEAK 31(13Q34) MUTATED DEL PEAK 31(13Q34) WILD-TYPE 
                         183                          220 
[1] "Del Peak 32(14q32.33) mutation analysis"
[1] 3
  DEL PEAK 32(14Q32.33) MUTATED DEL PEAK 32(14Q32.33) WILD-TYPE 
                            120                             283 
  DEL PEAK 32(14Q32.33) MUTATED DEL PEAK 32(14Q32.33) WILD-TYPE 
                            120                             283 
[1] "Del Peak 33(15q11.2) mutation analysis"
[1] 3
  DEL PEAK 33(15Q11.2) MUTATED DEL PEAK 33(15Q11.2) WILD-TYPE 
                           200                            203 
  DEL PEAK 33(15Q11.2) MUTATED DEL PEAK 33(15Q11.2) WILD-TYPE 
                           200                            203 
[1] "Del Peak 34(15q15.3) mutation analysis"
[1] 3
  DEL PEAK 34(15Q15.3) MUTATED DEL PEAK 34(15Q15.3) WILD-TYPE 
                           205                            198 
  DEL PEAK 34(15Q15.3) MUTATED DEL PEAK 34(15Q15.3) WILD-TYPE 
                           205                            198 
[1] "Del Peak 35(16q23.3) mutation analysis"
[1] 3
  DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE 
                           145                            258 
  DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE 
                           145                            258 
[1] "Del Peak 36(17p13.3) mutation analysis"
[1] 3
  DEL PEAK 36(17P13.3) MUTATED DEL PEAK 36(17P13.3) WILD-TYPE 
                           223                            180 
  DEL PEAK 36(17P13.3) MUTATED DEL PEAK 36(17P13.3) WILD-TYPE 
                           223                            180 
[1] "Del Peak 37(18q21.32) mutation analysis"
[1] 3
  DEL PEAK 37(18Q21.32) MUTATED DEL PEAK 37(18Q21.32) WILD-TYPE 
                            201                             202 
  DEL PEAK 37(18Q21.32) MUTATED DEL PEAK 37(18Q21.32) WILD-TYPE 
                            201                             202 
[1] "Del Peak 38(18q23) mutation analysis"
[1] 3
  DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE 
                         196                          207 
  DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE 
                         196                          207 
[1] "Del Peak 39(19p13.3) mutation analysis"
[1] 3
  DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE 
                           216                            187 
  DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE 
                           216                            187 
[1] "Del Peak 40(19p13.2) mutation analysis"
[1] 3
  DEL PEAK 40(19P13.2) MUTATED DEL PEAK 40(19P13.2) WILD-TYPE 
                           207                            196 
  DEL PEAK 40(19P13.2) MUTATED DEL PEAK 40(19P13.2) WILD-TYPE 
                           207                            196 
[1] "Del Peak 41(19q11) mutation analysis"
[1] 3
  DEL PEAK 41(19Q11) MUTATED DEL PEAK 41(19Q11) WILD-TYPE 
                         114                          289 
  DEL PEAK 41(19Q11) MUTATED DEL PEAK 41(19Q11) WILD-TYPE 
                         114                          289 
[1] "Del Peak 42(19q13.33) mutation analysis"
[1] 3
  DEL PEAK 42(19Q13.33) MUTATED DEL PEAK 42(19Q13.33) WILD-TYPE 
                            147                             256 
  DEL PEAK 42(19Q13.33) MUTATED DEL PEAK 42(19Q13.33) WILD-TYPE 
                            147                             256 
[1] "Del Peak 43(21q11.2) mutation analysis"
[1] 3
  DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE 
                           140                            263 
  DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE 
                           140                            263 
[1] "Del Peak 44(22q13.32) mutation analysis"
[1] 3
  DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE 
                            194                             209 
  DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE 
                            194                             209 
[1] "Del Peak 45(Xp22.2) mutation analysis"
[1] 3
  DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE 
                          117                           286 
  DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE 
                          117                           286 
[1] "data2feature, selection=ALL"
 [1] "MRNA_CNMF"             "MRNA_CHIERARCHICAL"    "CN_CNMF"              
 [4] "METHLYATION_CNMF"      "RPPA_CNMF"             "RPPA_CHIERARCHICAL"   
 [7] "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"          
[10] "MIRSEQ_CHIERARCHICAL" 

Input Data has 10 rows and 403 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'CN_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'RPPA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'RPPA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MRNASEQ_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "MRNA_CNMF"             "MRNA_CHIERARCHICAL"    "CN_CNMF"              
 [4] "METHLYATION_CNMF"      "RPPA_CNMF"             "RPPA_CHIERARCHICAL"   
 [7] "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"          
[10] "MIRSEQ_CHIERARCHICAL" 
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 403 columns, 0 survival variables, and 10 non-survival variables.
MRNA_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
CN_CNMF, nv=4, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=5, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1p34.3) mutation analysis
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                           0                             5
  CLUS_2                           3                             6
  CLUS_3                           4                             8
  CLUS_4                           1                             5
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                           1                             6
  CLUS_2                           5                             8
  CLUS_3                           2                            10
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          64                            58
  CLUS_2                          20                           137
  CLUS_3                          18                            52
  CLUS_4                           9                            45
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          23                            55
  CLUS_2                          30                            82
  CLUS_3                          32                            80
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          30                            59
  CLUS_2                          16                            59
  CLUS_3                          23                            48
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                           6                            17
  CLUS_2                          18                            55
  CLUS_3                          33                            50
  CLUS_4                          12                            44
D1V7, multiclass
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          35                           117
  CLUS_2                          27                            78
  CLUS_3                          35                            60
D1V9, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          40                           118
  CLUS_2                          50                           133
  CLUS_3                          21                            36
D1V10, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          42                           121
  CLUS_2                          33                            82
  CLUS_3                          36                            84

Clustering(2) Variable = Amp Peak  2(1p22.3) mutation analysis
D2V1, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           3                             6
  CLUS_3                           2                            10
  CLUS_4                           1                             5
D2V2, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                           1                             6
  CLUS_2                           3                            10
  CLUS_3                           3                             9
D2V3, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          58                            64
  CLUS_2                          18                           139
  CLUS_3                          17                            53
  CLUS_4                          13                            41
D2V4, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          19                            59
  CLUS_2                          34                            78
  CLUS_3                          30                            82
D2V5, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          28                            61
  CLUS_2                          15                            60
  CLUS_3                          21                            50
D2V6, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                           5                            18
  CLUS_2                          18                            55
  CLUS_3                          29                            54
  CLUS_4                          12                            44
D2V7, multiclass
D2V8, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          31                           121
  CLUS_2                          28                            77
  CLUS_3                          37                            58
D2V9, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          37                           121
  CLUS_2                          54                           129
  CLUS_3                          14                            43
D2V10, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          36                           127
  CLUS_2                          29                            86
  CLUS_3                          40                            80

Clustering(3) Variable = Amp Peak  3(1q21.3) mutation analysis
D3V1, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                           4                             1
  CLUS_2                           7                             2
  CLUS_3                           7                             5
  CLUS_4                           2                             4
D3V2, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                           3                             4
  CLUS_2                           8                             5
  CLUS_3                           9                             3
D3V3, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          94                            28
  CLUS_2                          90                            67
  CLUS_3                          53                            17
  CLUS_4                          48                             6
D3V4, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          55                            23
  CLUS_2                          94                            18
  CLUS_3                          69                            43
D3V5, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          63                            26
  CLUS_2                          60                            15
  CLUS_3                          53                            18
D3V6, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          16                             7
  CLUS_2                          56                            17
  CLUS_3                          59                            24
  CLUS_4                          45                            11
D3V7, multiclass
D3V8, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                         108                            44
  CLUS_2                          78                            27
  CLUS_3                          68                            27
D3V9, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                         106                            52
  CLUS_2                         141                            42
  CLUS_3                          34                            23
D3V10, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                         111                            52
  CLUS_2                          69                            46
  CLUS_3                         101                            19

Clustering(4) Variable = Amp Peak  4(3q26.2) mutation analysis
D4V1, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                           0                             5
  CLUS_2                           6                             3
  CLUS_3                           0                            12
  CLUS_4                           4                             2
D4V2, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                           4                             3
  CLUS_2                           0                            13
  CLUS_3                           6                             6
D4V3, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          43                            79
  CLUS_2                          33                           124
  CLUS_3                          45                            25
  CLUS_4                          20                            34
D4V4, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                           8                            70
  CLUS_2                          46                            66
  CLUS_3                          51                            61
D4V5, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          36                            53
  CLUS_2                          16                            59
  CLUS_3                          37                            34
D4V6, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                           6                            17
  CLUS_2                          35                            38
  CLUS_3                          38                            45
  CLUS_4                          10                            46
D4V7, multiclass
D4V8, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          32                           120
  CLUS_2                          55                            50
  CLUS_3                          41                            54
D4V9, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          32                           126
  CLUS_2                          90                            93
  CLUS_3                          17                            40
D4V10, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          32                           131
  CLUS_2                          46                            69
  CLUS_3                          61                            59

Clustering(5) Variable = Amp Peak  5(4q12) mutation analysis
D5V1, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                         1                           4
  CLUS_2                         3                           6
  CLUS_3                         3                           9
  CLUS_4                         3                           3
D5V2, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                         4                           3
  CLUS_2                         4                           9
  CLUS_3                         2                          10
D5V3, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        38                          84
  CLUS_2                         8                         149
  CLUS_3                        17                          53
  CLUS_4                        13                          41
D5V4, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        14                          64
  CLUS_2                        22                          90
  CLUS_3                        18                          94
D5V5, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        20                          69
  CLUS_2                         8                          67
  CLUS_3                        20                          51
D5V6, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                         3                          20
  CLUS_2                        17                          56
  CLUS_3                        23                          60
  CLUS_4                         5                          51
D5V7, multiclass
D5V8, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        20                         132
  CLUS_2                        22                          83
  CLUS_3                        28                          67
D5V9, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        20                         138
  CLUS_2                        44                         139
  CLUS_3                        12                          45
D5V10, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        20                         143
  CLUS_2                        32                          83
  CLUS_3                        24                          96

Clustering(6) Variable = Amp Peak  6(5p15.33) mutation analysis
D6V1, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                            5                              4
  CLUS_3                            7                              5
  CLUS_4                            4                              2
D6V2, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                            5                              2
  CLUS_2                            8                              5
  CLUS_3                            7                              5
D6V3, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                          112                             10
  CLUS_2                           65                             92
  CLUS_3                           39                             31
  CLUS_4                           44                             10
D6V4, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           50                             28
  CLUS_2                           75                             37
  CLUS_3                           74                             38
D6V5, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           68                             21
  CLUS_2                           44                             31
  CLUS_3                           47                             24
D6V6, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           11                             12
  CLUS_2                           52                             21
  CLUS_3                           67                             16
  CLUS_4                           29                             27
D6V7, multiclass
D6V8, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           87                             65
  CLUS_2                           66                             39
  CLUS_3                           74                             21
D6V9, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           87                             71
  CLUS_2                          131                             52
  CLUS_3                           41                             16
D6V10, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           90                             73
  CLUS_2                           80                             35
  CLUS_3                           89                             31

Clustering(7) Variable = Amp Peak  7(5p13.1) mutation analysis
D7V1, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                           5                             0
  CLUS_2                           5                             4
  CLUS_3                           6                             6
  CLUS_4                           3                             3
D7V2, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                           4                             3
  CLUS_2                           7                             6
  CLUS_3                           8                             4
D7V3, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                         101                            21
  CLUS_2                          59                            98
  CLUS_3                          34                            36
  CLUS_4                          41                            13
D7V4, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          46                            32
  CLUS_2                          67                            45
  CLUS_3                          66                            46
D7V5, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          59                            30
  CLUS_2                          42                            33
  CLUS_3                          43                            28
D7V6, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          10                            13
  CLUS_2                          48                            25
  CLUS_3                          58                            25
  CLUS_4                          28                            28
D7V7, multiclass
D7V8, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          78                            74
  CLUS_2                          64                            41
  CLUS_3                          61                            34
D7V9, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          76                            82
  CLUS_2                         119                            64
  CLUS_3                          38                            19
D7V10, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          82                            81
  CLUS_2                          70                            45
  CLUS_3                          81                            39

Clustering(8) Variable = Amp Peak  8(5q35.1) mutation analysis
D8V1, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                           3                             2
  CLUS_2                           2                             7
  CLUS_3                           6                             6
  CLUS_4                           0                             6
D8V2, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                           1                             6
  CLUS_2                           6                             7
  CLUS_3                           4                             8
D8V3, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          42                            80
  CLUS_2                          35                           122
  CLUS_3                           5                            65
  CLUS_4                           9                            45
D8V4, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          35                            43
  CLUS_2                          18                            94
  CLUS_3                          21                            91
D8V5, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          24                            65
  CLUS_2                          20                            55
  CLUS_3                          11                            60
D8V6, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                           4                            19
  CLUS_2                          10                            63
  CLUS_3                          26                            57
  CLUS_4                          15                            41
D8V7, multiclass
D8V8, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          49                           103
  CLUS_2                          11                            94
  CLUS_3                          24                            71
D8V9, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          45                           113
  CLUS_2                          27                           156
  CLUS_3                          19                            38
D8V10, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          47                           116
  CLUS_2                          26                            89
  CLUS_3                          18                           102

Clustering(9) Variable = Amp Peak  9(6p25.3) mutation analysis
D9V1, multiclass
        clus
vv       AMP PEAK  9(6P25.3) MUTATED AMP PEAK  9(6P25.3) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           3                             6
  CLUS_3                           5                             7
  CLUS_4                           4                             2
D9V2, multiclass
        clus
vv       AMP PEAK  9(6P25.3) MUTATED AMP PEAK  9(6P25.3) WILD-TYPE
  CLUS_1                           5                             2
  CLUS_2                           5                             8
  CLUS_3                           3                             9
D9V3, multiclass
        clus
vv       AMP PEAK  9(6P25.3) MUTATED AMP PEAK  9(6P25.3) WILD-TYPE
  CLUS_1                          47                            75
  CLUS_2                          38                           119
  CLUS_3                          31                            39
  CLUS_4                          43                            11
D9V4, multiclass
        clus
vv       AMP PEAK  9(6P25.3) MUTATED AMP PEAK  9(6P25.3) WILD-TYPE
  CLUS_1                          27                            51
  CLUS_2                          57                            55
  CLUS_3                          35                            77
D9V5, multiclass
        clus
vv       AMP PEAK  9(6P25.3) MUTATED AMP PEAK  9(6P25.3) WILD-TYPE
  CLUS_1                          24                            65
  CLUS_2                          37                            38
  CLUS_3                          34                            37
D9V6, multiclass
        clus
vv       AMP PEAK  9(6P25.3) MUTATED AMP PEAK  9(6P25.3) WILD-TYPE
  CLUS_1                           6                            17
  CLUS_2                          37                            36
  CLUS_3                          29                            54
  CLUS_4                          23                            33
D9V7, multiclass
D9V8, multiclass
        clus
vv       AMP PEAK  9(6P25.3) MUTATED AMP PEAK  9(6P25.3) WILD-TYPE
  CLUS_1                          56                            96
  CLUS_2                          48                            57
  CLUS_3                          36                            59
D9V9, multiclass
        clus
vv       AMP PEAK  9(6P25.3) MUTATED AMP PEAK  9(6P25.3) WILD-TYPE
  CLUS_1                          50                           108
  CLUS_2                          86                            97
  CLUS_3                          19                            38
D9V10, multiclass
        clus
vv       AMP PEAK  9(6P25.3) MUTATED AMP PEAK  9(6P25.3) WILD-TYPE
  CLUS_1                          46                           117
  CLUS_2                          50                            65
  CLUS_3                          59                            61

Clustering(10) Variable = Amp Peak 10(6p21.1) mutation analysis
D10V1, multiclass
        clus
vv       AMP PEAK 10(6P21.1) MUTATED AMP PEAK 10(6P21.1) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           2                             7
  CLUS_3                           4                             8
  CLUS_4                           3                             3
D10V2, multiclass
        clus
vv       AMP PEAK 10(6P21.1) MUTATED AMP PEAK 10(6P21.1) WILD-TYPE
  CLUS_1                           4                             3
  CLUS_2                           4                             9
  CLUS_3                           2                            10
D10V3, multiclass
        clus
vv       AMP PEAK 10(6P21.1) MUTATED AMP PEAK 10(6P21.1) WILD-TYPE
  CLUS_1                          48                            74
  CLUS_2                          38                           119
  CLUS_3                          27                            43
  CLUS_4                          38                            16
D10V4, multiclass
        clus
vv       AMP PEAK 10(6P21.1) MUTATED AMP PEAK 10(6P21.1) WILD-TYPE
  CLUS_1                          27                            51
  CLUS_2                          53                            59
  CLUS_3                          33                            79
D10V5, multiclass
        clus
vv       AMP PEAK 10(6P21.1) MUTATED AMP PEAK 10(6P21.1) WILD-TYPE
  CLUS_1                          26                            63
  CLUS_2                          34                            41
  CLUS_3                          26                            45
D10V6, multiclass
        clus
vv       AMP PEAK 10(6P21.1) MUTATED AMP PEAK 10(6P21.1) WILD-TYPE
  CLUS_1                           6                            17
  CLUS_2                          28                            45
  CLUS_3                          32                            51
  CLUS_4                          20                            36
D10V7, multiclass
D10V8, multiclass
        clus
vv       AMP PEAK 10(6P21.1) MUTATED AMP PEAK 10(6P21.1) WILD-TYPE
  CLUS_1                          55                            97
  CLUS_2                          40                            65
  CLUS_3                          36                            59
D10V9, multiclass
        clus
vv       AMP PEAK 10(6P21.1) MUTATED AMP PEAK 10(6P21.1) WILD-TYPE
  CLUS_1                          52                           106
  CLUS_2                          77                           106
  CLUS_3                          18                            39
D10V10, multiclass
        clus
vv       AMP PEAK 10(6P21.1) MUTATED AMP PEAK 10(6P21.1) WILD-TYPE
  CLUS_1                          49                           114
  CLUS_2                          43                            72
  CLUS_3                          55                            65

Clustering(11) Variable = Amp Peak 11(7p21.1) mutation analysis
D11V1, multiclass
        clus
vv       AMP PEAK 11(7P21.1) MUTATED AMP PEAK 11(7P21.1) WILD-TYPE
  CLUS_1                           4                             1
  CLUS_2                           5                             4
  CLUS_3                           6                             6
  CLUS_4                           3                             3
D11V2, multiclass
        clus
vv       AMP PEAK 11(7P21.1) MUTATED AMP PEAK 11(7P21.1) WILD-TYPE
  CLUS_1                           4                             3
  CLUS_2                           7                             6
  CLUS_3                           7                             5
D11V3, multiclass
        clus
vv       AMP PEAK 11(7P21.1) MUTATED AMP PEAK 11(7P21.1) WILD-TYPE
  CLUS_1                         104                            18
  CLUS_2                          50                           107
  CLUS_3                          41                            29
  CLUS_4                          25                            29
D11V4, multiclass
        clus
vv       AMP PEAK 11(7P21.1) MUTATED AMP PEAK 11(7P21.1) WILD-TYPE
  CLUS_1                          32                            46
  CLUS_2                          67                            45
  CLUS_3                          69                            43
D11V5, multiclass
        clus
vv       AMP PEAK 11(7P21.1) MUTATED AMP PEAK 11(7P21.1) WILD-TYPE
  CLUS_1                          61                            28
  CLUS_2                          29                            46
  CLUS_3                          43                            28
D11V6, multiclass
        clus
vv       AMP PEAK 11(7P21.1) MUTATED AMP PEAK 11(7P21.1) WILD-TYPE
  CLUS_1                           8                            15
  CLUS_2                          43                            30
  CLUS_3                          59                            24
  CLUS_4                          23                            33
D11V7, multiclass
D11V8, multiclass
        clus
vv       AMP PEAK 11(7P21.1) MUTATED AMP PEAK 11(7P21.1) WILD-TYPE
  CLUS_1                          65                            87
  CLUS_2                          55                            50
  CLUS_3                          76                            19
D11V9, multiclass
        clus
vv       AMP PEAK 11(7P21.1) MUTATED AMP PEAK 11(7P21.1) WILD-TYPE
  CLUS_1                          68                            90
  CLUS_2                         108                            75
  CLUS_3                          41                            16
D11V10, multiclass
        clus
vv       AMP PEAK 11(7P21.1) MUTATED AMP PEAK 11(7P21.1) WILD-TYPE
  CLUS_1                          70                            93
  CLUS_2                          77                            38
  CLUS_3                          70                            50

Clustering(12) Variable = Amp Peak 12(7p11.2) mutation analysis
D12V1, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                           5                             4
  CLUS_3                           6                             6
  CLUS_4                           3                             3
D12V2, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                           3                             4
  CLUS_2                           7                             6
  CLUS_3                           6                             6
D12V3, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          99                            23
  CLUS_2                          49                           108
  CLUS_3                          42                            28
  CLUS_4                          20                            34
D12V4, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          30                            48
  CLUS_2                          62                            50
  CLUS_3                          69                            43
D12V5, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          58                            31
  CLUS_2                          27                            48
  CLUS_3                          44                            27
D12V6, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                           7                            16
  CLUS_2                          43                            30
  CLUS_3                          58                            25
  CLUS_4                          21                            35
D12V7, multiclass
D12V8, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          58                            94
  CLUS_2                          54                            51
  CLUS_3                          74                            21
D12V9, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          59                            99
  CLUS_2                         107                            76
  CLUS_3                          41                            16
D12V10, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          62                           101
  CLUS_2                          80                            35
  CLUS_3                          65                            55

Clustering(13) Variable = Amp Peak 13(7q31.2) mutation analysis
D13V1, multiclass
        clus
vv       AMP PEAK 13(7Q31.2) MUTATED AMP PEAK 13(7Q31.2) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                           6                             3
  CLUS_3                           4                             8
  CLUS_4                           2                             4
D13V2, multiclass
        clus
vv       AMP PEAK 13(7Q31.2) MUTATED AMP PEAK 13(7Q31.2) WILD-TYPE
  CLUS_1                           2                             5
  CLUS_2                           5                             8
  CLUS_3                           7                             5
D13V3, multiclass
        clus
vv       AMP PEAK 13(7Q31.2) MUTATED AMP PEAK 13(7Q31.2) WILD-TYPE
  CLUS_1                          81                            41
  CLUS_2                          42                           115
  CLUS_3                          29                            41
  CLUS_4                          20                            34
D13V4, multiclass
        clus
vv       AMP PEAK 13(7Q31.2) MUTATED AMP PEAK 13(7Q31.2) WILD-TYPE
  CLUS_1                          26                            52
  CLUS_2                          48                            64
  CLUS_3                          55                            57
D13V5, multiclass
        clus
vv       AMP PEAK 13(7Q31.2) MUTATED AMP PEAK 13(7Q31.2) WILD-TYPE
  CLUS_1                          46                            43
  CLUS_2                          26                            49
  CLUS_3                          32                            39
D13V6, multiclass
        clus
vv       AMP PEAK 13(7Q31.2) MUTATED AMP PEAK 13(7Q31.2) WILD-TYPE
  CLUS_1                           9                            14
  CLUS_2                          30                            43
  CLUS_3                          47                            36
  CLUS_4                          18                            38
D13V7, multiclass
D13V8, multiclass
        clus
vv       AMP PEAK 13(7Q31.2) MUTATED AMP PEAK 13(7Q31.2) WILD-TYPE
  CLUS_1                          48                           104
  CLUS_2                          36                            69
  CLUS_3                          63                            32
D13V9, multiclass
        clus
vv       AMP PEAK 13(7Q31.2) MUTATED AMP PEAK 13(7Q31.2) WILD-TYPE
  CLUS_1                          52                           106
  CLUS_2                          88                            95
  CLUS_3                          29                            28
D13V10, multiclass
        clus
vv       AMP PEAK 13(7Q31.2) MUTATED AMP PEAK 13(7Q31.2) WILD-TYPE
  CLUS_1                          55                           108
  CLUS_2                          65                            50
  CLUS_3                          49                            71

Clustering(14) Variable = Amp Peak 14(8p11.21) mutation analysis
D14V1, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                            0                              5
  CLUS_2                            3                              6
  CLUS_3                            1                             11
  CLUS_4                            2                              4
D14V2, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                            2                              5
  CLUS_2                            1                             12
  CLUS_3                            3                              9
D14V3, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           27                             95
  CLUS_2                           31                            126
  CLUS_3                           30                             40
  CLUS_4                           35                             19
D14V4, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           15                             63
  CLUS_2                           45                             67
  CLUS_3                           35                             77
D14V5, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           22                             67
  CLUS_2                           20                             55
  CLUS_3                           33                             38
D14V6, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                            4                             19
  CLUS_2                           35                             38
  CLUS_3                           22                             61
  CLUS_4                           14                             42
D14V7, multiclass
D14V8, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           30                            122
  CLUS_2                           55                             50
  CLUS_3                           24                             71
D14V9, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           32                            126
  CLUS_2                           71                            112
  CLUS_3                           18                             39
D14V10, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           37                            126
  CLUS_2                           34                             81
  CLUS_3                           50                             70

Clustering(15) Variable = Amp Peak 15(8q11.1) mutation analysis
D15V1, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                           4                             1
  CLUS_2                           6                             3
  CLUS_3                           1                            11
  CLUS_4                           4                             2
D15V2, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                           5                             2
  CLUS_2                           2                            11
  CLUS_3                           8                             4
D15V3, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          64                            58
  CLUS_2                          39                           118
  CLUS_3                          38                            32
  CLUS_4                          41                            13
D15V4, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          23                            55
  CLUS_2                          69                            43
  CLUS_3                          44                            68
D15V5, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          42                            47
  CLUS_2                          27                            48
  CLUS_3                          42                            29
D15V6, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                           5                            18
  CLUS_2                          42                            31
  CLUS_3                          45                            38
  CLUS_4                          19                            37
D15V7, multiclass
D15V8, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          50                           102
  CLUS_2                          64                            41
  CLUS_3                          48                            47
D15V9, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          47                           111
  CLUS_2                         108                            75
  CLUS_3                          25                            32
D15V10, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          51                           112
  CLUS_2                          57                            58
  CLUS_3                          72                            48

Clustering(16) Variable = Amp Peak 16(8q24.21) mutation analysis
D16V1, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                            5                              0
  CLUS_2                            7                              2
  CLUS_3                            3                              9
  CLUS_4                            5                              1
D16V2, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                            6                              1
  CLUS_2                            4                              9
  CLUS_3                           10                              2
D16V3, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           84                             38
  CLUS_2                           64                             93
  CLUS_3                           54                             16
  CLUS_4                           49                              5
D16V4, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           32                             46
  CLUS_2                           90                             22
  CLUS_3                           63                             49
D16V5, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           58                             31
  CLUS_2                           43                             32
  CLUS_3                           52                             19
D16V6, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           10                             13
  CLUS_2                           53                             20
  CLUS_3                           61                             22
  CLUS_4                           29                             27
D16V7, multiclass
D16V8, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           76                             76
  CLUS_2                           77                             28
  CLUS_3                           68                             27
D16V9, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           75                             83
  CLUS_2                          138                             45
  CLUS_3                           35                             22
D16V10, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           77                             86
  CLUS_2                           79                             36
  CLUS_3                           92                             28

Clustering(17) Variable = Amp Peak 17(10p15.1) mutation analysis
D17V1, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                            0                              5
  CLUS_2                            2                              7
  CLUS_3                            0                             12
  CLUS_4                            3                              3
D17V2, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                            3                              4
  CLUS_2                            0                             13
  CLUS_3                            2                             10
D17V3, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           27                             95
  CLUS_2                           26                            131
  CLUS_3                           27                             43
  CLUS_4                           28                             26
D17V4, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                            4                             74
  CLUS_2                           41                             71
  CLUS_3                           35                             77
D17V5, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           17                             72
  CLUS_2                           25                             50
  CLUS_3                           30                             41
D17V6, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                            8                             15
  CLUS_2                           32                             41
  CLUS_3                           16                             67
  CLUS_4                           16                             40
D17V7, multiclass
D17V8, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           24                            128
  CLUS_2                           47                             58
  CLUS_3                           24                             71
D17V9, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           29                            129
  CLUS_2                           65                            118
  CLUS_3                           11                             46
D17V10, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           27                            136
  CLUS_2                           32                             83
  CLUS_3                           46                             74

Clustering(18) Variable = Amp Peak 18(11q13.3) mutation analysis
D18V1, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                            2                              3
  CLUS_2                            4                              5
  CLUS_3                            1                             11
  CLUS_4                            6                              0
D18V2, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                            7                              0
  CLUS_2                            2                             11
  CLUS_3                            4                              8
D18V3, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           55                             67
  CLUS_2                           19                            138
  CLUS_3                           33                             37
  CLUS_4                           30                             24
D18V4, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           14                             64
  CLUS_2                           57                             55
  CLUS_3                           34                             78
D18V5, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           31                             58
  CLUS_2                           18                             57
  CLUS_3                           34                             37
D18V6, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                            3                             20
  CLUS_2                           34                             39
  CLUS_3                           33                             50
  CLUS_4                           13                             43
D18V7, multiclass
D18V8, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           30                            122
  CLUS_2                           53                             52
  CLUS_3                           40                             55
D18V9, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           28                            130
  CLUS_2                           86                             97
  CLUS_3                           20                             37
D18V10, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           30                            133
  CLUS_2                           45                             70
  CLUS_3                           59                             61

Clustering(19) Variable = Amp Peak 19(12p12.1) mutation analysis
D19V1, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            3                              6
  CLUS_3                            2                             10
  CLUS_4                            4                              2
D19V2, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                            5                              2
  CLUS_2                            2                             11
  CLUS_3                            3                              9
D19V3, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           35                             87
  CLUS_2                           34                            123
  CLUS_3                           57                             13
  CLUS_4                           14                             40
D19V4, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                            8                             70
  CLUS_2                           44                             68
  CLUS_3                           51                             61
D19V5, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           28                             61
  CLUS_2                           18                             57
  CLUS_3                           33                             38
D19V6, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                            6                             17
  CLUS_2                           32                             41
  CLUS_3                           29                             54
  CLUS_4                           12                             44
D19V7, multiclass
D19V8, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           34                            118
  CLUS_2                           55                             50
  CLUS_3                           36                             59
D19V9, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           35                            123
  CLUS_2                           85                             98
  CLUS_3                           17                             40
D19V10, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           34                            129
  CLUS_2                           48                             67
  CLUS_3                           55                             65

Clustering(20) Variable = Amp Peak 20(12q14.1) mutation analysis
D20V1, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            4                              5
  CLUS_3                            2                             10
  CLUS_4                            3                              3
D20V2, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                            4                              3
  CLUS_2                            3                             10
  CLUS_3                            3                              9
D20V3, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           23                             99
  CLUS_2                           31                            126
  CLUS_3                           54                             16
  CLUS_4                           17                             37
D20V4, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                            8                             70
  CLUS_2                           40                             72
  CLUS_3                           44                             68
D20V5, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           25                             64
  CLUS_2                           21                             54
  CLUS_3                           34                             37
D20V6, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                            5                             18
  CLUS_2                           37                             36
  CLUS_3                           25                             58
  CLUS_4                           13                             43
D20V7, multiclass
D20V8, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           26                            126
  CLUS_2                           57                             48
  CLUS_3                           27                             68
D20V9, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           26                            132
  CLUS_2                           83                            100
  CLUS_3                           14                             43
D20V10, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           26                            137
  CLUS_2                           38                             77
  CLUS_3                           59                             61

Clustering(21) Variable = Amp Peak 21(12q15) mutation analysis
D21V1, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                          1                            4
  CLUS_2                          3                            6
  CLUS_3                          1                           11
  CLUS_4                          3                            3
D21V2, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                          4                            3
  CLUS_2                          2                           11
  CLUS_3                          2                           10
D21V3, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         27                           95
  CLUS_2                         32                          125
  CLUS_3                         52                           18
  CLUS_4                         18                           36
D21V4, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                          8                           70
  CLUS_2                         45                           67
  CLUS_3                         43                           69
D21V5, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         30                           59
  CLUS_2                         18                           57
  CLUS_3                         33                           38
D21V6, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                          4                           19
  CLUS_2                         36                           37
  CLUS_3                         29                           54
  CLUS_4                         12                           44
D21V7, multiclass
D21V8, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         32                          120
  CLUS_2                         56                           49
  CLUS_3                         25                           70
D21V9, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         29                          129
  CLUS_2                         84                           99
  CLUS_3                         15                           42
D21V10, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         30                          133
  CLUS_2                         34                           81
  CLUS_3                         64                           56

Clustering(22) Variable = Amp Peak 22(13q33.3) mutation analysis
D22V1, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                            0                              5
  CLUS_2                            0                              9
  CLUS_3                            4                              8
  CLUS_4                            1                              5
D22V2, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                            1                              6
  CLUS_2                            4                              9
  CLUS_3                            0                             12
D22V3, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           21                            101
  CLUS_2                           18                            139
  CLUS_3                           14                             56
  CLUS_4                            9                             45
D22V4, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           11                             67
  CLUS_2                           22                             90
  CLUS_3                           15                             97
D22V5, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           13                             76
  CLUS_2                            9                             66
  CLUS_3                           13                             58
D22V6, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                            1                             22
  CLUS_2                           13                             60
  CLUS_3                           14                             69
  CLUS_4                            7                             49
D22V7, multiclass
D22V8, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           23                            129
  CLUS_2                           21                             84
  CLUS_3                           11                             84
D22V9, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           20                            138
  CLUS_2                           34                            149
  CLUS_3                            7                             50
D22V10, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           18                            145
  CLUS_2                           19                             96
  CLUS_3                           24                             96

Clustering(23) Variable = Amp Peak 23(14q13.3) mutation analysis
D23V1, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                            4                              5
  CLUS_3                            4                              8
  CLUS_4                            4                              2
D23V2, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                            5                              2
  CLUS_2                            4                              9
  CLUS_3                            6                              6
D23V3, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           64                             58
  CLUS_2                           41                            116
  CLUS_3                           34                             36
  CLUS_4                           41                             13
D23V4, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           28                             50
  CLUS_2                           69                             43
  CLUS_3                           36                             76
D23V5, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           33                             56
  CLUS_2                           27                             48
  CLUS_3                           42                             29
D23V6, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                            9                             14
  CLUS_2                           42                             31
  CLUS_3                           35                             48
  CLUS_4                           16                             40
D23V7, multiclass
D23V8, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           47                            105
  CLUS_2                           58                             47
  CLUS_3                           51                             44
D23V9, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           46                            112
  CLUS_2                          102                             81
  CLUS_3                           29                             28
D23V10, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           45                            118
  CLUS_2                           55                             60
  CLUS_3                           77                             43

Clustering(24) Variable = Amp Peak 24(17q12) mutation analysis
D24V1, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                          3                            2
  CLUS_2                          6                            3
  CLUS_3                          3                            9
  CLUS_4                          4                            2
D24V2, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                          5                            2
  CLUS_2                          3                           10
  CLUS_3                          8                            4
D24V3, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         77                           45
  CLUS_2                         35                          122
  CLUS_3                         41                           29
  CLUS_4                         27                           27
D24V4, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         17                           61
  CLUS_2                         67                           45
  CLUS_3                         47                           65
D24V5, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         45                           44
  CLUS_2                         26                           49
  CLUS_3                         37                           34
D24V6, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                          3                           20
  CLUS_2                         38                           35
  CLUS_3                         49                           34
  CLUS_4                         18                           38
D24V7, multiclass
D24V8, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         44                          108
  CLUS_2                         52                           53
  CLUS_3                         62                           33
D24V9, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         48                          110
  CLUS_2                        105                           78
  CLUS_3                         25                           32
D24V10, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         47                          116
  CLUS_2                         57                           58
  CLUS_3                         74                           46

Clustering(25) Variable = Amp Peak 25(17q23.1) mutation analysis
D25V1, multiclass
        clus
vv       AMP PEAK 25(17Q23.1) MUTATED AMP PEAK 25(17Q23.1) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                            8                              1
  CLUS_3                            4                              8
  CLUS_4                            3                              3
D25V2, multiclass
        clus
vv       AMP PEAK 25(17Q23.1) MUTATED AMP PEAK 25(17Q23.1) WILD-TYPE
  CLUS_1                            4                              3
  CLUS_2                            5                              8
  CLUS_3                            9                              3
D25V3, multiclass
        clus
vv       AMP PEAK 25(17Q23.1) MUTATED AMP PEAK 25(17Q23.1) WILD-TYPE
  CLUS_1                           85                             37
  CLUS_2                           41                            116
  CLUS_3                           44                             26
  CLUS_4                           25                             29
D25V4, multiclass
        clus
vv       AMP PEAK 25(17Q23.1) MUTATED AMP PEAK 25(17Q23.1) WILD-TYPE
  CLUS_1                           18                             60
  CLUS_2                           65                             47
  CLUS_3                           56                             56
D25V5, multiclass
        clus
vv       AMP PEAK 25(17Q23.1) MUTATED AMP PEAK 25(17Q23.1) WILD-TYPE
  CLUS_1                           48                             41
  CLUS_2                           24                             51
  CLUS_3                           43                             28
D25V6, multiclass
        clus
vv       AMP PEAK 25(17Q23.1) MUTATED AMP PEAK 25(17Q23.1) WILD-TYPE
  CLUS_1                            3                             20
  CLUS_2                           43                             30
  CLUS_3                           54                             29
  CLUS_4                           15                             41
D25V7, multiclass
D25V8, multiclass
        clus
vv       AMP PEAK 25(17Q23.1) MUTATED AMP PEAK 25(17Q23.1) WILD-TYPE
  CLUS_1                           46                            106
  CLUS_2                           54                             51
  CLUS_3                           69                             26
D25V9, multiclass
        clus
vv       AMP PEAK 25(17Q23.1) MUTATED AMP PEAK 25(17Q23.1) WILD-TYPE
  CLUS_1                           56                            102
  CLUS_2                          111                             72
  CLUS_3                           26                             31
D25V10, multiclass
        clus
vv       AMP PEAK 25(17Q23.1) MUTATED AMP PEAK 25(17Q23.1) WILD-TYPE
  CLUS_1                           55                            108
  CLUS_2                           67                             48
  CLUS_3                           71                             49

Clustering(26) Variable = Amp Peak 26(18p11.32) mutation analysis
D26V1, multiclass
        clus
vv       AMP PEAK 26(18P11.32) MUTATED AMP PEAK 26(18P11.32) WILD-TYPE
  CLUS_1                             0                               5
  CLUS_2                             3                               6
  CLUS_3                             3                               9
  CLUS_4                             1                               5
D26V2, multiclass
        clus
vv       AMP PEAK 26(18P11.32) MUTATED AMP PEAK 26(18P11.32) WILD-TYPE
  CLUS_1                             1                               6
  CLUS_2                             3                              10
  CLUS_3                             3                               9
D26V3, multiclass
        clus
vv       AMP PEAK 26(18P11.32) MUTATED AMP PEAK 26(18P11.32) WILD-TYPE
  CLUS_1                            38                              84
  CLUS_2                            18                             139
  CLUS_3                            20                              50
  CLUS_4                            27                              27
D26V4, multiclass
        clus
vv       AMP PEAK 26(18P11.32) MUTATED AMP PEAK 26(18P11.32) WILD-TYPE
  CLUS_1                            11                              67
  CLUS_2                            41                              71
  CLUS_3                            28                              84
D26V5, multiclass
        clus
vv       AMP PEAK 26(18P11.32) MUTATED AMP PEAK 26(18P11.32) WILD-TYPE
  CLUS_1                            16                              73
  CLUS_2                            18                              57
  CLUS_3                            21                              50
D26V6, multiclass
        clus
vv       AMP PEAK 26(18P11.32) MUTATED AMP PEAK 26(18P11.32) WILD-TYPE
  CLUS_1                             3                              20
  CLUS_2                            21                              52
  CLUS_3                            19                              64
  CLUS_4                            12                              44
D26V7, multiclass
D26V8, multiclass
        clus
vv       AMP PEAK 26(18P11.32) MUTATED AMP PEAK 26(18P11.32) WILD-TYPE
  CLUS_1                            27                             125
  CLUS_2                            36                              69
  CLUS_3                            27                              68
D26V9, multiclass
        clus
vv       AMP PEAK 26(18P11.32) MUTATED AMP PEAK 26(18P11.32) WILD-TYPE
  CLUS_1                            25                             133
  CLUS_2                            62                             121
  CLUS_3                            15                              42
D26V10, multiclass
        clus
vv       AMP PEAK 26(18P11.32) MUTATED AMP PEAK 26(18P11.32) WILD-TYPE
  CLUS_1                            23                             140
  CLUS_2                            32                              83
  CLUS_3                            47                              73

Clustering(27) Variable = Amp Peak 27(18q11.2) mutation analysis
D27V1, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            1                              8
  CLUS_3                            1                             11
  CLUS_4                            3                              3
D27V2, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                            4                              3
  CLUS_2                            1                             12
  CLUS_3                            1                             11
D27V3, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           26                             96
  CLUS_2                           19                            138
  CLUS_3                           17                             53
  CLUS_4                           25                             29
D27V4, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                            9                             69
  CLUS_2                           34                             78
  CLUS_3                           26                             86
D27V5, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           13                             76
  CLUS_2                           12                             63
  CLUS_3                           21                             50
D27V6, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                            2                             21
  CLUS_2                           24                             49
  CLUS_3                            9                             74
  CLUS_4                           11                             45
D27V7, multiclass
D27V8, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           21                            131
  CLUS_2                           33                             72
  CLUS_3                           19                             76
D27V9, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           21                            137
  CLUS_2                           52                            131
  CLUS_3                           13                             44
D27V10, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           19                            144
  CLUS_2                           22                             93
  CLUS_3                           45                             75

Clustering(28) Variable = Amp Peak 28(19q12) mutation analysis
D28V1, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                          1                            4
  CLUS_2                          4                            5
  CLUS_3                          0                           12
  CLUS_4                          2                            4
D28V2, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                          2                            5
  CLUS_2                          0                           13
  CLUS_3                          5                            7
D28V3, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         31                           91
  CLUS_2                         23                          134
  CLUS_3                         32                           38
  CLUS_4                         24                           30
D28V4, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         16                           62
  CLUS_2                         38                           74
  CLUS_3                         36                           76
D28V5, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         20                           69
  CLUS_2                         15                           60
  CLUS_3                         27                           44
D28V6, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                          5                           18
  CLUS_2                         28                           45
  CLUS_3                         18                           65
  CLUS_4                         11                           45
D28V7, multiclass
D28V8, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         24                          128
  CLUS_2                         42                           63
  CLUS_3                         30                           65
D28V9, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         23                          135
  CLUS_2                         72                          111
  CLUS_3                         15                           42
D28V10, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         23                          140
  CLUS_2                         37                           78
  CLUS_3                         50                           70

Clustering(29) Variable = Amp Peak 29(20q11.21) mutation analysis
D29V1, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                             1                               4
  CLUS_2                             4                               5
  CLUS_3                             3                               9
  CLUS_4                             6                               0
D29V2, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                             6                               1
  CLUS_2                             3                              10
  CLUS_3                             5                               7
D29V3, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            62                              60
  CLUS_2                            39                             118
  CLUS_3                            45                              25
  CLUS_4                            34                              20
D29V4, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            25                              53
  CLUS_2                            58                              54
  CLUS_3                            50                              62
D29V5, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            45                              44
  CLUS_2                            24                              51
  CLUS_3                            37                              34
D29V6, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                             8                              15
  CLUS_2                            38                              35
  CLUS_3                            45                              38
  CLUS_4                            15                              41
D29V7, multiclass
D29V8, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            58                              94
  CLUS_2                            53                              52
  CLUS_3                            48                              47
D29V9, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            47                             111
  CLUS_2                           102                              81
  CLUS_3                            27                              30
D29V10, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            51                             112
  CLUS_2                            59                              56
  CLUS_3                            66                              54

Clustering(30) Variable = Amp Peak 30(20q13.33) mutation analysis
D30V1, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                             2                               3
  CLUS_2                             5                               4
  CLUS_3                             2                              10
  CLUS_4                             6                               0
D30V2, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                             6                               1
  CLUS_2                             3                              10
  CLUS_3                             6                               6
D30V3, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            67                              55
  CLUS_2                            47                             110
  CLUS_3                            41                              29
  CLUS_4                            40                              14
D30V4, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            31                              47
  CLUS_2                            64                              48
  CLUS_3                            53                              59
D30V5, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            50                              39
  CLUS_2                            28                              47
  CLUS_3                            44                              27
D30V6, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            10                              13
  CLUS_2                            41                              32
  CLUS_3                            52                              31
  CLUS_4                            19                              37
D30V7, multiclass
D30V8, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            60                              92
  CLUS_2                            61                              44
  CLUS_3                            53                              42
D30V9, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            54                             104
  CLUS_2                           110                              73
  CLUS_3                            27                              30
D30V10, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            56                             107
  CLUS_2                            61                              54
  CLUS_3                            74                              46

Clustering(31) Variable = Amp Peak 31(22q11.22) mutation analysis
D31V1, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                             1                               4
  CLUS_2                             2                               7
  CLUS_3                             1                              11
  CLUS_4                             3                               3
D31V2, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                             3                               4
  CLUS_2                             1                              12
  CLUS_3                             3                               9
D31V3, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            31                              91
  CLUS_2                            15                             142
  CLUS_3                            13                              57
  CLUS_4                            10                              44
D31V4, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                             9                              69
  CLUS_2                            23                              89
  CLUS_3                            20                              92
D31V5, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            21                              68
  CLUS_2                             7                              68
  CLUS_3                            17                              54
D31V6, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                             3                              20
  CLUS_2                            18                              55
  CLUS_3                            18                              65
  CLUS_4                             6                              50
D31V7, multiclass
D31V8, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            20                             132
  CLUS_2                            22                              83
  CLUS_3                            17                              78
D31V9, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            19                             139
  CLUS_2                            37                             146
  CLUS_3                            13                              44
D31V10, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            21                             142
  CLUS_2                            21                              94
  CLUS_3                            27                              93

Clustering(32) Variable = Amp Peak 32(Xq28) mutation analysis
D32V1, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                         3                           2
  CLUS_2                         3                           6
  CLUS_3                         3                           9
  CLUS_4                         4                           2
D32V2, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                         5                           2
  CLUS_2                         3                          10
  CLUS_3                         5                           7
D32V3, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        59                          63
  CLUS_2                        18                         139
  CLUS_3                        29                          41
  CLUS_4                        24                          30
D32V4, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        17                          61
  CLUS_2                        51                          61
  CLUS_3                        30                          82
D32V5, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        33                          56
  CLUS_2                        17                          58
  CLUS_3                        32                          39
D32V6, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                         5                          18
  CLUS_2                        30                          43
  CLUS_3                        35                          48
  CLUS_4                        12                          44
D32V7, multiclass
D32V8, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        37                         115
  CLUS_2                        40                          65
  CLUS_3                        42                          53
D32V9, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        39                         119
  CLUS_2                        66                         117
  CLUS_3                        23                          34
D32V10, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        41                         122
  CLUS_2                        45                          70
  CLUS_3                        42                          78

Clustering(33) Variable = Del Peak  1(1p36.13) mutation analysis
D33V1, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            3                              6
  CLUS_3                            2                             10
  CLUS_4                            2                              4
D33V2, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                            3                              4
  CLUS_2                            2                             11
  CLUS_3                            3                              9
D33V3, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           12                            110
  CLUS_2                           32                            125
  CLUS_3                           24                             46
  CLUS_4                           24                             30
D33V4, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                            8                             70
  CLUS_2                           35                             77
  CLUS_3                           24                             88
D33V5, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           22                             67
  CLUS_2                           16                             59
  CLUS_3                           22                             49
D33V6, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                            5                             18
  CLUS_2                           23                             50
  CLUS_3                           17                             66
  CLUS_4                           15                             41
D33V7, multiclass
D33V8, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           21                            131
  CLUS_2                           38                             67
  CLUS_3                           22                             73
D33V9, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           27                            131
  CLUS_2                           57                            126
  CLUS_3                            5                             52
D33V10, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           28                            135
  CLUS_2                           22                             93
  CLUS_3                           39                             81

Clustering(34) Variable = Del Peak  2(1p13.1) mutation analysis
D34V1, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           3                             6
  CLUS_3                           3                             9
  CLUS_4                           3                             3
D34V2, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                           3                             4
  CLUS_2                           3                            10
  CLUS_3                           4                             8
D34V3, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          26                            96
  CLUS_2                          36                           121
  CLUS_3                          33                            37
  CLUS_4                          24                            30
D34V4, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          16                            62
  CLUS_2                          45                            67
  CLUS_3                          21                            91
D34V5, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          24                            65
  CLUS_2                          22                            53
  CLUS_3                          28                            43
D34V6, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                           6                            17
  CLUS_2                          27                            46
  CLUS_3                          23                            60
  CLUS_4                          18                            38
D34V7, multiclass
D34V8, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          37                           115
  CLUS_2                          44                            61
  CLUS_3                          24                            71
D34V9, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          33                           125
  CLUS_2                          66                           117
  CLUS_3                          17                            40
D34V10, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          35                           128
  CLUS_2                          37                            78
  CLUS_3                          44                            76

Clustering(35) Variable = Del Peak  3(2q22.1) mutation analysis
D35V1, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           0                             5
  CLUS_2                           1                             8
  CLUS_3                           2                            10
  CLUS_4                           0                             6
D35V2, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           0                             7
  CLUS_2                           2                            11
  CLUS_3                           1                            11
D35V3, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          14                           108
  CLUS_2                           7                           150
  CLUS_3                          12                            58
  CLUS_4                           8                            46
D35V4, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           9                            69
  CLUS_2                          15                            97
  CLUS_3                          10                           102
D35V5, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           7                            82
  CLUS_2                           5                            70
  CLUS_3                          13                            58
D35V6, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           1                            22
  CLUS_2                          10                            63
  CLUS_3                          10                            73
  CLUS_4                           4                            52
D35V7, multiclass
D35V8, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           8                           144
  CLUS_2                          20                            85
  CLUS_3                          10                            85
D35V9, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           9                           149
  CLUS_2                          23                           160
  CLUS_3                           8                            49
D35V10, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          11                           152
  CLUS_2                          12                           103
  CLUS_3                          17                           103

Clustering(36) Variable = Del Peak  4(2q37.3) mutation analysis
D36V1, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           3                             6
  CLUS_3                           3                             9
  CLUS_4                           3                             3
D36V2, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           4                             3
  CLUS_2                           4                             9
  CLUS_3                           2                            10
D36V3, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          23                            99
  CLUS_2                          13                           144
  CLUS_3                           9                            61
  CLUS_4                          14                            40
D36V4, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          12                            66
  CLUS_2                          21                            91
  CLUS_3                          11                           101
D36V5, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          17                            72
  CLUS_2                           7                            68
  CLUS_3                          12                            59
D36V6, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           4                            19
  CLUS_2                          10                            63
  CLUS_3                          18                            65
  CLUS_4                           4                            52
D36V7, multiclass
D36V8, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          13                           139
  CLUS_2                          19                            86
  CLUS_3                          23                            72
D36V9, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          13                           145
  CLUS_2                          38                           145
  CLUS_3                           8                            49
D36V10, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          12                           151
  CLUS_2                          24                            91
  CLUS_3                          23                            97

Clustering(37) Variable = Del Peak  5(3p26.3) mutation analysis
D37V1, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           4                             5
  CLUS_3                           3                             9
  CLUS_4                           5                             1
D37V2, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                           5                             2
  CLUS_2                           4                             9
  CLUS_3                           4                             8
D37V3, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          60                            62
  CLUS_2                          48                           109
  CLUS_3                          41                            29
  CLUS_4                          34                            20
D37V4, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          31                            47
  CLUS_2                          60                            52
  CLUS_3                          51                            61
D37V5, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          39                            50
  CLUS_2                          34                            41
  CLUS_3                          40                            31
D37V6, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          10                            13
  CLUS_2                          42                            31
  CLUS_3                          42                            41
  CLUS_4                          19                            37
D37V7, multiclass
D37V8, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          49                           103
  CLUS_2                          67                            38
  CLUS_3                          45                            50
D37V9, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          51                           107
  CLUS_2                          99                            84
  CLUS_3                          29                            28
D37V10, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          51                           112
  CLUS_2                          56                            59
  CLUS_3                          72                            48

Clustering(38) Variable = Del Peak  6(3p21.31) mutation analysis
D38V1, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            6                              3
  CLUS_3                            3                              9
  CLUS_4                            4                              2
D38V2, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                            4                              3
  CLUS_2                            4                              9
  CLUS_3                            6                              6
D38V3, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           62                             60
  CLUS_2                           51                            106
  CLUS_3                           46                             24
  CLUS_4                           35                             19
D38V4, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           31                             47
  CLUS_2                           60                             52
  CLUS_3                           58                             54
D38V5, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           40                             49
  CLUS_2                           34                             41
  CLUS_3                           45                             26
D38V6, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           11                             12
  CLUS_2                           45                             28
  CLUS_3                           44                             39
  CLUS_4                           19                             37
D38V7, multiclass
D38V8, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           49                            103
  CLUS_2                           75                             30
  CLUS_3                           47                             48
D38V9, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           52                            106
  CLUS_2                          106                             77
  CLUS_3                           32                             25
D38V10, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           55                            108
  CLUS_2                           59                             56
  CLUS_3                           76                             44

Clustering(39) Variable = Del Peak  7(3q11.1) mutation analysis
D39V1, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                           0                             5
  CLUS_2                           1                             8
  CLUS_3                           2                            10
  CLUS_4                           2                             4
D39V2, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                           2                             5
  CLUS_2                           2                            11
  CLUS_3                           1                            11
D39V3, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          41                            81
  CLUS_2                          36                           121
  CLUS_3                          19                            51
  CLUS_4                          20                            34
D39V4, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          25                            53
  CLUS_2                          42                            70
  CLUS_3                          32                            80
D39V5, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          21                            68
  CLUS_2                          25                            50
  CLUS_3                          22                            49
D39V6, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          10                            13
  CLUS_2                          22                            51
  CLUS_3                          19                            64
  CLUS_4                          17                            39
D39V7, multiclass
D39V8, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          37                           115
  CLUS_2                          41                            64
  CLUS_3                          24                            71
D39V9, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          44                           114
  CLUS_2                          53                           130
  CLUS_3                          18                            39
D39V10, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          45                           118
  CLUS_2                          32                            83
  CLUS_3                          38                            82

Clustering(40) Variable = Del Peak  8(3q29) mutation analysis
D40V1, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                         0                           5
  CLUS_2                         2                           7
  CLUS_3                         2                          10
  CLUS_4                         2                           4
D40V2, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                         2                           5
  CLUS_2                         3                          10
  CLUS_3                         1                          11
D40V3, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        35                          87
  CLUS_2                        37                         120
  CLUS_3                        20                          50
  CLUS_4                        20                          34
D40V4, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        26                          52
  CLUS_2                        47                          65
  CLUS_3                        21                          91
D40V5, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        17                          72
  CLUS_2                        31                          44
  CLUS_3                        16                          55
D40V6, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        12                          11
  CLUS_2                        19                          54
  CLUS_3                        16                          67
  CLUS_4                        17                          39
D40V7, multiclass
D40V8, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        40                         112
  CLUS_2                        38                          67
  CLUS_3                        21                          74
D40V9, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        44                         114
  CLUS_2                        54                         129
  CLUS_3                        13                          44
D40V10, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        45                         118
  CLUS_2                        23                          92
  CLUS_3                        43                          77

Clustering(41) Variable = Del Peak  9(4p15.2) mutation analysis
D41V1, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           2                             7
  CLUS_3                           1                            11
  CLUS_4                           2                             4
D41V2, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                           2                             5
  CLUS_2                           1                            12
  CLUS_3                           3                             9
D41V3, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          26                            96
  CLUS_2                          27                           130
  CLUS_3                          20                            50
  CLUS_4                          22                            32
D41V4, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                           5                            73
  CLUS_2                          31                            81
  CLUS_3                          32                            80
D41V5, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          21                            68
  CLUS_2                          16                            59
  CLUS_3                          25                            46
D41V6, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                           6                            17
  CLUS_2                          27                            46
  CLUS_3                          18                            65
  CLUS_4                          11                            45
D41V7, multiclass
D41V8, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          18                           134
  CLUS_2                          43                            62
  CLUS_3                          19                            76
D41V9, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          18                           140
  CLUS_2                          63                           120
  CLUS_3                          13                            44
D41V10, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          19                           144
  CLUS_2                          30                            85
  CLUS_3                          45                            75

Clustering(42) Variable = Del Peak 10(4q22.1) mutation analysis
D42V1, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                           3                             2
  CLUS_2                           1                             8
  CLUS_3                           0                            12
  CLUS_4                           5                             1
D42V2, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                           6                             1
  CLUS_2                           0                            13
  CLUS_3                           3                             9
D42V3, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          33                            89
  CLUS_2                          28                           129
  CLUS_3                          35                            35
  CLUS_4                          23                            31
D42V4, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          10                            68
  CLUS_2                          43                            69
  CLUS_3                          34                            78
D42V5, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          27                            62
  CLUS_2                          19                            56
  CLUS_3                          29                            42
D42V6, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                           9                            14
  CLUS_2                          29                            44
  CLUS_3                          26                            57
  CLUS_4                          11                            45
D42V7, multiclass
D42V8, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          23                           129
  CLUS_2                          60                            45
  CLUS_3                          23                            72
D42V9, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          25                           133
  CLUS_2                          77                           106
  CLUS_3                          16                            41
D42V10, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          25                           138
  CLUS_2                          35                            80
  CLUS_3                          58                            62

Clustering(43) Variable = Del Peak 11(4q35.1) mutation analysis
D43V1, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                           3                             2
  CLUS_2                           1                             8
  CLUS_3                           1                            11
  CLUS_4                           5                             1
D43V2, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                           6                             1
  CLUS_2                           1                            12
  CLUS_3                           3                             9
D43V3, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          40                            82
  CLUS_2                          32                           125
  CLUS_3                          43                            27
  CLUS_4                          28                            26
D43V4, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                           8                            70
  CLUS_2                          54                            58
  CLUS_3                          48                            64
D43V5, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          33                            56
  CLUS_2                          24                            51
  CLUS_3                          38                            33
D43V6, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          11                            12
  CLUS_2                          41                            32
  CLUS_3                          31                            52
  CLUS_4                          12                            44
D43V7, multiclass
D43V8, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          28                           124
  CLUS_2                          73                            32
  CLUS_3                          26                            69
D43V9, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          34                           124
  CLUS_2                          94                            89
  CLUS_3                          14                            43
D43V10, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          31                           132
  CLUS_2                          34                            81
  CLUS_3                          77                            43

Clustering(44) Variable = Del Peak 12(5q11.2) mutation analysis
D44V1, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                           4                             5
  CLUS_3                           4                             8
  CLUS_4                           5                             1
D44V2, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                           5                             2
  CLUS_2                           4                             9
  CLUS_3                           6                             6
D44V3, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          55                            67
  CLUS_2                          24                           133
  CLUS_3                          38                            32
  CLUS_4                          28                            26
D44V4, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          14                            64
  CLUS_2                          48                            64
  CLUS_3                          41                            71
D44V5, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          38                            51
  CLUS_2                          16                            59
  CLUS_3                          31                            40
D44V6, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                           6                            17
  CLUS_2                          31                            42
  CLUS_3                          37                            46
  CLUS_4                          11                            45
D44V7, multiclass
D44V8, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          30                           122
  CLUS_2                          56                            49
  CLUS_3                          38                            57
D44V9, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          34                           124
  CLUS_2                          90                            93
  CLUS_3                          18                            39
D44V10, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          34                           129
  CLUS_2                          44                            71
  CLUS_3                          64                            56

Clustering(45) Variable = Del Peak 13(5q34) mutation analysis
D45V1, multiclass
        clus
vv       DEL PEAK 13(5Q34) MUTATED DEL PEAK 13(5Q34) WILD-TYPE
  CLUS_1                         1                           4
  CLUS_2                         4                           5
  CLUS_3                         1                          11
  CLUS_4                         4                           2
D45V2, multiclass
        clus
vv       DEL PEAK 13(5Q34) MUTATED DEL PEAK 13(5Q34) WILD-TYPE
  CLUS_1                         4                           3
  CLUS_2                         2                          11
  CLUS_3                         4                           8
D45V3, multiclass
        clus
vv       DEL PEAK 13(5Q34) MUTATED DEL PEAK 13(5Q34) WILD-TYPE
  CLUS_1                        46                          76
  CLUS_2                        23                         134
  CLUS_3                        43                          27
  CLUS_4                        28                          26
D45V4, multiclass
        clus
vv       DEL PEAK 13(5Q34) MUTATED DEL PEAK 13(5Q34) WILD-TYPE
  CLUS_1                         8                          70
  CLUS_2                        56                          56
  CLUS_3                        41                          71
D45V5, multiclass
        clus
vv       DEL PEAK 13(5Q34) MUTATED DEL PEAK 13(5Q34) WILD-TYPE
  CLUS_1                        32                          57
  CLUS_2                        17                          58
  CLUS_3                        33                          38
D45V6, multiclass
        clus
vv       DEL PEAK 13(5Q34) MUTATED DEL PEAK 13(5Q34) WILD-TYPE
  CLUS_1                         4                          19
  CLUS_2                        37                          36
  CLUS_3                        31                          52
  CLUS_4                        10                          46
D45V7, multiclass
D45V8, multiclass
        clus
vv       DEL PEAK 13(5Q34) MUTATED DEL PEAK 13(5Q34) WILD-TYPE
  CLUS_1                        24                         128
  CLUS_2                        58                          47
  CLUS_3                        37                          58
D45V9, multiclass
        clus
vv       DEL PEAK 13(5Q34) MUTATED DEL PEAK 13(5Q34) WILD-TYPE
  CLUS_1                        28                         130
  CLUS_2                        94                          89
  CLUS_3                        15                          42
D45V10, multiclass
        clus
vv       DEL PEAK 13(5Q34) MUTATED DEL PEAK 13(5Q34) WILD-TYPE
  CLUS_1                        27                         136
  CLUS_2                        48                          67
  CLUS_3                        62                          58

Clustering(46) Variable = Del Peak 14(6q12) mutation analysis
D46V1, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                         3                           2
  CLUS_2                         3                           6
  CLUS_3                         3                           9
  CLUS_4                         1                           5
D46V2, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                         2                           5
  CLUS_2                         4                           9
  CLUS_3                         4                           8
D46V3, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        44                          78
  CLUS_2                        51                         106
  CLUS_3                        22                          48
  CLUS_4                        20                          34
D46V4, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        30                          48
  CLUS_2                        46                          66
  CLUS_3                        33                          79
D46V5, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        29                          60
  CLUS_2                        22                          53
  CLUS_3                        28                          43
D46V6, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                         3                          20
  CLUS_2                        28                          45
  CLUS_3                        28                          55
  CLUS_4                        20                          36
D46V7, multiclass
D46V8, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        54                          98
  CLUS_2                        35                          70
  CLUS_3                        34                          61
D46V9, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        46                         112
  CLUS_2                        65                         118
  CLUS_3                        24                          33
D46V10, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        49                         114
  CLUS_2                        53                          62
  CLUS_3                        33                          87

Clustering(47) Variable = Del Peak 15(6q22.31) mutation analysis
D47V1, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                            4                              5
  CLUS_3                            6                              6
  CLUS_4                            5                              1
D47V2, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                            6                              1
  CLUS_2                            7                              6
  CLUS_3                            5                              7
D47V3, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           60                             62
  CLUS_2                           71                             86
  CLUS_3                           33                             37
  CLUS_4                           35                             19
D47V4, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           45                             33
  CLUS_2                           70                             42
  CLUS_3                           41                             71
D47V5, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           40                             49
  CLUS_2                           41                             34
  CLUS_3                           37                             34
D47V6, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                            7                             16
  CLUS_2                           40                             33
  CLUS_3                           36                             47
  CLUS_4                           35                             21
D47V7, multiclass
D47V8, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           77                             75
  CLUS_2                           53                             52
  CLUS_3                           49                             46
D47V9, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           74                             84
  CLUS_2                           98                             85
  CLUS_3                           26                             31
D47V10, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           80                             83
  CLUS_2                           62                             53
  CLUS_3                           56                             64

Clustering(48) Variable = Del Peak 16(6q26) mutation analysis
D48V1, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                         3                           2
  CLUS_2                         6                           3
  CLUS_3                         5                           7
  CLUS_4                         5                           1
D48V2, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                         6                           1
  CLUS_2                         6                           7
  CLUS_3                         7                           5
D48V3, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        61                          61
  CLUS_2                        71                          86
  CLUS_3                        37                          33
  CLUS_4                        35                          19
D48V4, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        43                          35
  CLUS_2                        69                          43
  CLUS_3                        43                          69
D48V5, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        40                          49
  CLUS_2                        41                          34
  CLUS_3                        38                          33
D48V6, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                         5                          18
  CLUS_2                        41                          32
  CLUS_3                        38                          45
  CLUS_4                        35                          21
D48V7, multiclass
D48V8, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        75                          77
  CLUS_2                        57                          48
  CLUS_3                        52                          43
D48V9, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        73                          85
  CLUS_2                       102                          81
  CLUS_3                        27                          30
D48V10, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        77                          86
  CLUS_2                        68                          47
  CLUS_3                        57                          63

Clustering(49) Variable = Del Peak 17(8p23.2) mutation analysis
D49V1, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                           4                             1
  CLUS_2                           7                             2
  CLUS_3                           3                             9
  CLUS_4                           6                             0
D49V2, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                           7                             0
  CLUS_2                           4                             9
  CLUS_3                           9                             3
D49V3, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          91                            31
  CLUS_2                          37                           120
  CLUS_3                          42                            28
  CLUS_4                          27                            27
D49V4, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          27                            51
  CLUS_2                          60                            52
  CLUS_3                          62                            50
D49V5, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          47                            42
  CLUS_2                          27                            48
  CLUS_3                          42                            29
D49V6, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          10                            13
  CLUS_2                          39                            34
  CLUS_3                          51                            32
  CLUS_4                          16                            40
D49V7, multiclass
D49V8, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          54                            98
  CLUS_2                          53                            52
  CLUS_3                          68                            27
D49V9, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          61                            97
  CLUS_2                         102                            81
  CLUS_3                          31                            26
D49V10, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          57                           106
  CLUS_2                          76                            39
  CLUS_3                          61                            59

Clustering(50) Variable = Del Peak 18(8p21.3) mutation analysis
D50V1, multiclass
        clus
vv       DEL PEAK 18(8P21.3) MUTATED DEL PEAK 18(8P21.3) WILD-TYPE
  CLUS_1                           4                             1
  CLUS_2                           7                             2
  CLUS_3                           3                             9
  CLUS_4                           6                             0
D50V2, multiclass
        clus
vv       DEL PEAK 18(8P21.3) MUTATED DEL PEAK 18(8P21.3) WILD-TYPE
  CLUS_1                           7                             0
  CLUS_2                           4                             9
  CLUS_3                           9                             3
D50V3, multiclass
        clus
vv       DEL PEAK 18(8P21.3) MUTATED DEL PEAK 18(8P21.3) WILD-TYPE
  CLUS_1                          94                            28
  CLUS_2                          41                           116
  CLUS_3                          45                            25
  CLUS_4                          30                            24
D50V4, multiclass
        clus
vv       DEL PEAK 18(8P21.3) MUTATED DEL PEAK 18(8P21.3) WILD-TYPE
  CLUS_1                          28                            50
  CLUS_2                          65                            47
  CLUS_3                          66                            46
D50V5, multiclass
        clus
vv       DEL PEAK 18(8P21.3) MUTATED DEL PEAK 18(8P21.3) WILD-TYPE
  CLUS_1                          49                            40
  CLUS_2                          30                            45
  CLUS_3                          45                            26
D50V6, multiclass
        clus
vv       DEL PEAK 18(8P21.3) MUTATED DEL PEAK 18(8P21.3) WILD-TYPE
  CLUS_1                          10                            13
  CLUS_2                          42                            31
  CLUS_3                          54                            29
  CLUS_4                          18                            38
D50V7, multiclass
D50V8, multiclass
        clus
vv       DEL PEAK 18(8P21.3) MUTATED DEL PEAK 18(8P21.3) WILD-TYPE
  CLUS_1                          59                            93
  CLUS_2                          56                            49
  CLUS_3                          71                            24
D50V9, multiclass
        clus
vv       DEL PEAK 18(8P21.3) MUTATED DEL PEAK 18(8P21.3) WILD-TYPE
  CLUS_1                          64                            94
  CLUS_2                         114                            69
  CLUS_3                          29                            28
D50V10, multiclass
        clus
vv       DEL PEAK 18(8P21.3) MUTATED DEL PEAK 18(8P21.3) WILD-TYPE
  CLUS_1                          61                           102
  CLUS_2                          79                            36
  CLUS_3                          67                            53

Clustering(51) Variable = Del Peak 19(9p23) mutation analysis
D51V1, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                         2                           3
  CLUS_2                         5                           4
  CLUS_3                         8                           4
  CLUS_4                         5                           1
D51V2, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                         5                           2
  CLUS_2                         8                           5
  CLUS_3                         7                           5
D51V3, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        72                          50
  CLUS_2                        74                          83
  CLUS_3                        54                          16
  CLUS_4                        26                          28
D51V4, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        42                          36
  CLUS_2                        61                          51
  CLUS_3                        65                          47
D51V5, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        47                          42
  CLUS_2                        38                          37
  CLUS_3                        41                          30
D51V6, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        13                          10
  CLUS_2                        43                          30
  CLUS_3                        43                          40
  CLUS_4                        27                          29
D51V7, multiclass
D51V8, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        77                          75
  CLUS_2                        70                          35
  CLUS_3                        48                          47
D51V9, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        85                          73
  CLUS_2                       101                          82
  CLUS_3                        36                          21
D51V10, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        82                          81
  CLUS_2                        66                          49
  CLUS_3                        74                          46

Clustering(52) Variable = Del Peak 20(9p21.3) mutation analysis
D52V1, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                           5                             4
  CLUS_3                           8                             4
  CLUS_4                           5                             1
D52V2, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                           5                             2
  CLUS_2                           8                             5
  CLUS_3                           7                             5
D52V3, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          74                            48
  CLUS_2                          78                            79
  CLUS_3                          56                            14
  CLUS_4                          24                            30
D52V4, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          40                            38
  CLUS_2                          63                            49
  CLUS_3                          70                            42
D52V5, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          52                            37
  CLUS_2                          38                            37
  CLUS_3                          43                            28
D52V6, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          11                            12
  CLUS_2                          46                            27
  CLUS_3                          48                            35
  CLUS_4                          28                            28
D52V7, multiclass
D52V8, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          80                            72
  CLUS_2                          73                            32
  CLUS_3                          50                            45
D52V9, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          90                            68
  CLUS_2                         104                            79
  CLUS_3                          35                            22
D52V10, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          86                            77
  CLUS_2                          67                            48
  CLUS_3                          76                            44

Clustering(53) Variable = Del Peak 21(9q21.11) mutation analysis
D53V1, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                            0                              5
  CLUS_2                            6                              3
  CLUS_3                            6                              6
  CLUS_4                            5                              1
D53V2, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                            5                              2
  CLUS_2                            6                              7
  CLUS_3                            6                              6
D53V3, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           61                             61
  CLUS_2                           58                             99
  CLUS_3                           49                             21
  CLUS_4                           34                             20
D53V4, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           31                             47
  CLUS_2                           60                             52
  CLUS_3                           59                             53
D53V5, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           43                             46
  CLUS_2                           30                             45
  CLUS_3                           41                             30
D53V6, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           10                             13
  CLUS_2                           43                             30
  CLUS_3                           43                             40
  CLUS_4                           18                             38
D53V7, multiclass
D53V8, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           59                             93
  CLUS_2                           72                             33
  CLUS_3                           43                             52
D53V9, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           63                             95
  CLUS_2                          104                             79
  CLUS_3                           32                             25
D53V10, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           60                            103
  CLUS_2                           61                             54
  CLUS_3                           78                             42

Clustering(54) Variable = Del Peak 22(10p15.3) mutation analysis
D54V1, multiclass
        clus
vv       DEL PEAK 22(10P15.3) MUTATED DEL PEAK 22(10P15.3) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            2                              7
  CLUS_3                            3                              9
  CLUS_4                            1                              5
D54V2, multiclass
        clus
vv       DEL PEAK 22(10P15.3) MUTATED DEL PEAK 22(10P15.3) WILD-TYPE
  CLUS_1                            1                              6
  CLUS_2                            3                             10
  CLUS_3                            3                              9
D54V3, multiclass
        clus
vv       DEL PEAK 22(10P15.3) MUTATED DEL PEAK 22(10P15.3) WILD-TYPE
  CLUS_1                           46                             76
  CLUS_2                           19                            138
  CLUS_3                           23                             47
  CLUS_4                           11                             43
D54V4, multiclass
        clus
vv       DEL PEAK 22(10P15.3) MUTATED DEL PEAK 22(10P15.3) WILD-TYPE
  CLUS_1                           19                             59
  CLUS_2                           32                             80
  CLUS_3                           23                             89
D54V5, multiclass
        clus
vv       DEL PEAK 22(10P15.3) MUTATED DEL PEAK 22(10P15.3) WILD-TYPE
  CLUS_1                           24                             65
  CLUS_2                           15                             60
  CLUS_3                           18                             53
D54V6, multiclass
        clus
vv       DEL PEAK 22(10P15.3) MUTATED DEL PEAK 22(10P15.3) WILD-TYPE
  CLUS_1                            5                             18
  CLUS_2                           17                             56
  CLUS_3                           24                             59
  CLUS_4                           11                             45
D54V7, multiclass
D54V8, multiclass
        clus
vv       DEL PEAK 22(10P15.3) MUTATED DEL PEAK 22(10P15.3) WILD-TYPE
  CLUS_1                           32                            120
  CLUS_2                           29                             76
  CLUS_3                           23                             72
D54V9, multiclass
        clus
vv       DEL PEAK 22(10P15.3) MUTATED DEL PEAK 22(10P15.3) WILD-TYPE
  CLUS_1                           26                            132
  CLUS_2                           50                            133
  CLUS_3                           22                             35
D54V10, multiclass
        clus
vv       DEL PEAK 22(10P15.3) MUTATED DEL PEAK 22(10P15.3) WILD-TYPE
  CLUS_1                           29                            134
  CLUS_2                           36                             79
  CLUS_3                           33                             87

Clustering(55) Variable = Del Peak 23(10q26.3) mutation analysis
D55V1, multiclass
        clus
vv       DEL PEAK 23(10Q26.3) MUTATED DEL PEAK 23(10Q26.3) WILD-TYPE
  CLUS_1                            2                              3
  CLUS_2                            4                              5
  CLUS_3                            4                              8
  CLUS_4                            1                              5
D55V2, multiclass
        clus
vv       DEL PEAK 23(10Q26.3) MUTATED DEL PEAK 23(10Q26.3) WILD-TYPE
  CLUS_1                            1                              6
  CLUS_2                            4                              9
  CLUS_3                            6                              6
D55V3, multiclass
        clus
vv       DEL PEAK 23(10Q26.3) MUTATED DEL PEAK 23(10Q26.3) WILD-TYPE
  CLUS_1                           52                             70
  CLUS_2                           25                            132
  CLUS_3                           18                             52
  CLUS_4                           18                             36
D55V4, multiclass
        clus
vv       DEL PEAK 23(10Q26.3) MUTATED DEL PEAK 23(10Q26.3) WILD-TYPE
  CLUS_1                           18                             60
  CLUS_2                           37                             75
  CLUS_3                           26                             86
D55V5, multiclass
        clus
vv       DEL PEAK 23(10Q26.3) MUTATED DEL PEAK 23(10Q26.3) WILD-TYPE
  CLUS_1                           38                             51
  CLUS_2                           14                             61
  CLUS_3                           16                             55
D55V6, multiclass
        clus
vv       DEL PEAK 23(10Q26.3) MUTATED DEL PEAK 23(10Q26.3) WILD-TYPE
  CLUS_1                            6                             17
  CLUS_2                           16                             57
  CLUS_3                           35                             48
  CLUS_4                           11                             45
D55V7, multiclass
D55V8, multiclass
        clus
vv       DEL PEAK 23(10Q26.3) MUTATED DEL PEAK 23(10Q26.3) WILD-TYPE
  CLUS_1                           34                            118
  CLUS_2                           27                             78
  CLUS_3                           37                             58
D55V9, multiclass
        clus
vv       DEL PEAK 23(10Q26.3) MUTATED DEL PEAK 23(10Q26.3) WILD-TYPE
  CLUS_1                           32                            126
  CLUS_2                           61                            122
  CLUS_3                           18                             39
D55V10, multiclass
        clus
vv       DEL PEAK 23(10Q26.3) MUTATED DEL PEAK 23(10Q26.3) WILD-TYPE
  CLUS_1                           32                            131
  CLUS_2                           36                             79
  CLUS_3                           43                             77

Clustering(56) Variable = Del Peak 24(11p15.5) mutation analysis
D56V1, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            2                              7
  CLUS_3                            1                             11
  CLUS_4                            3                              3
D56V2, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                            4                              3
  CLUS_2                            1                             12
  CLUS_3                            2                             10
D56V3, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           39                             83
  CLUS_2                           24                            133
  CLUS_3                           29                             41
  CLUS_4                           15                             39
D56V4, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           12                             66
  CLUS_2                           37                             75
  CLUS_3                           34                             78
D56V5, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           19                             70
  CLUS_2                           14                             61
  CLUS_3                           31                             40
D56V6, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                            5                             18
  CLUS_2                           31                             42
  CLUS_3                           19                             64
  CLUS_4                            9                             47
D56V7, multiclass
D56V8, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           22                            130
  CLUS_2                           44                             61
  CLUS_3                           27                             68
D56V9, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           34                            124
  CLUS_2                           62                            121
  CLUS_3                            9                             48
D56V10, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           28                            135
  CLUS_2                           36                             79
  CLUS_3                           41                             79

Clustering(57) Variable = Del Peak 25(11q25) mutation analysis
D57V1, multiclass
        clus
vv       DEL PEAK 25(11Q25) MUTATED DEL PEAK 25(11Q25) WILD-TYPE
  CLUS_1                          2                            3
  CLUS_2                          2                            7
  CLUS_3                          0                           12
  CLUS_4                          1                            5
D57V2, multiclass
        clus
vv       DEL PEAK 25(11Q25) MUTATED DEL PEAK 25(11Q25) WILD-TYPE
  CLUS_1                          2                            5
  CLUS_2                          0                           13
  CLUS_3                          3                            9
D57V3, multiclass
        clus
vv       DEL PEAK 25(11Q25) MUTATED DEL PEAK 25(11Q25) WILD-TYPE
  CLUS_1                         22                          100
  CLUS_2                         27                          130
  CLUS_3                         23                           47
  CLUS_4                         16                           38
D57V4, multiclass
        clus
vv       DEL PEAK 25(11Q25) MUTATED DEL PEAK 25(11Q25) WILD-TYPE
  CLUS_1                         14                           64
  CLUS_2                         31                           81
  CLUS_3                         28                           84
D57V5, multiclass
        clus
vv       DEL PEAK 25(11Q25) MUTATED DEL PEAK 25(11Q25) WILD-TYPE
  CLUS_1                         10                           79
  CLUS_2                         17                           58
  CLUS_3                         26                           45
D57V6, multiclass
        clus
vv       DEL PEAK 25(11Q25) MUTATED DEL PEAK 25(11Q25) WILD-TYPE
  CLUS_1                          6                           17
  CLUS_2                         26                           47
  CLUS_3                         10                           73
  CLUS_4                         11                           45
D57V7, multiclass
D57V8, multiclass
        clus
vv       DEL PEAK 25(11Q25) MUTATED DEL PEAK 25(11Q25) WILD-TYPE
  CLUS_1                         25                          127
  CLUS_2                         35                           70
  CLUS_3                         19                           76
D57V9, multiclass
        clus
vv       DEL PEAK 25(11Q25) MUTATED DEL PEAK 25(11Q25) WILD-TYPE
  CLUS_1                         34                          124
  CLUS_2                         46                          137
  CLUS_3                          7                           50
D57V10, multiclass
        clus
vv       DEL PEAK 25(11Q25) MUTATED DEL PEAK 25(11Q25) WILD-TYPE
  CLUS_1                         34                          129
  CLUS_2                         22                           93
  CLUS_3                         31                           89

Clustering(58) Variable = Del Peak 26(12p13.2) mutation analysis
D58V1, multiclass
        clus
vv       DEL PEAK 26(12P13.2) MUTATED DEL PEAK 26(12P13.2) WILD-TYPE
  CLUS_1                            0                              5
  CLUS_2                            5                              4
  CLUS_3                            5                              7
  CLUS_4                            2                              4
D58V2, multiclass
        clus
vv       DEL PEAK 26(12P13.2) MUTATED DEL PEAK 26(12P13.2) WILD-TYPE
  CLUS_1                            2                              5
  CLUS_2                            6                              7
  CLUS_3                            4                              8
D58V3, multiclass
        clus
vv       DEL PEAK 26(12P13.2) MUTATED DEL PEAK 26(12P13.2) WILD-TYPE
  CLUS_1                           44                             78
  CLUS_2                           35                            122
  CLUS_3                            9                             61
  CLUS_4                           19                             35
D58V4, multiclass
        clus
vv       DEL PEAK 26(12P13.2) MUTATED DEL PEAK 26(12P13.2) WILD-TYPE
  CLUS_1                           24                             54
  CLUS_2                           38                             74
  CLUS_3                           16                             96
D58V5, multiclass
        clus
vv       DEL PEAK 26(12P13.2) MUTATED DEL PEAK 26(12P13.2) WILD-TYPE
  CLUS_1                           33                             56
  CLUS_2                           18                             57
  CLUS_3                           15                             56
D58V6, multiclass
        clus
vv       DEL PEAK 26(12P13.2) MUTATED DEL PEAK 26(12P13.2) WILD-TYPE
  CLUS_1                            5                             18
  CLUS_2                           12                             61
  CLUS_3                           36                             47
  CLUS_4                           13                             43
D58V7, multiclass
D58V8, multiclass
        clus
vv       DEL PEAK 26(12P13.2) MUTATED DEL PEAK 26(12P13.2) WILD-TYPE
  CLUS_1                           42                            110
  CLUS_2                           21                             84
  CLUS_3                           33                             62
D58V9, multiclass
        clus
vv       DEL PEAK 26(12P13.2) MUTATED DEL PEAK 26(12P13.2) WILD-TYPE
  CLUS_1                           41                            117
  CLUS_2                           48                            135
  CLUS_3                           15                             42
D58V10, multiclass
        clus
vv       DEL PEAK 26(12P13.2) MUTATED DEL PEAK 26(12P13.2) WILD-TYPE
  CLUS_1                           42                            121
  CLUS_2                           31                             84
  CLUS_3                           31                             89

Clustering(59) Variable = Del Peak 27(12q12) mutation analysis
D59V1, multiclass
        clus
vv       DEL PEAK 27(12Q12) MUTATED DEL PEAK 27(12Q12) WILD-TYPE
  CLUS_1                          0                            5
  CLUS_2                          2                            7
  CLUS_3                          4                            8
  CLUS_4                          1                            5
D59V2, multiclass
        clus
vv       DEL PEAK 27(12Q12) MUTATED DEL PEAK 27(12Q12) WILD-TYPE
  CLUS_1                          1                            6
  CLUS_2                          4                            9
  CLUS_3                          2                           10
D59V3, multiclass
        clus
vv       DEL PEAK 27(12Q12) MUTATED DEL PEAK 27(12Q12) WILD-TYPE
  CLUS_1                         38                           84
  CLUS_2                         26                          131
  CLUS_3                          6                           64
  CLUS_4                          7                           47
D59V4, multiclass
        clus
vv       DEL PEAK 27(12Q12) MUTATED DEL PEAK 27(12Q12) WILD-TYPE
  CLUS_1                         15                           63
  CLUS_2                         26                           86
  CLUS_3                         17                           95
D59V5, multiclass
        clus
vv       DEL PEAK 27(12Q12) MUTATED DEL PEAK 27(12Q12) WILD-TYPE
  CLUS_1                         24                           65
  CLUS_2                         12                           63
  CLUS_3                         10                           61
D59V6, multiclass
        clus
vv       DEL PEAK 27(12Q12) MUTATED DEL PEAK 27(12Q12) WILD-TYPE
  CLUS_1                          3                           20
  CLUS_2                          7                           66
  CLUS_3                         25                           58
  CLUS_4                         11                           45
D59V7, multiclass
D59V8, multiclass
        clus
vv       DEL PEAK 27(12Q12) MUTATED DEL PEAK 27(12Q12) WILD-TYPE
  CLUS_1                         30                          122
  CLUS_2                         14                           91
  CLUS_3                         22                           73
D59V9, multiclass
        clus
vv       DEL PEAK 27(12Q12) MUTATED DEL PEAK 27(12Q12) WILD-TYPE
  CLUS_1                         33                          125
  CLUS_2                         28                          155
  CLUS_3                         14                           43
D59V10, multiclass
        clus
vv       DEL PEAK 27(12Q12) MUTATED DEL PEAK 27(12Q12) WILD-TYPE
  CLUS_1                         37                          126
  CLUS_2                         25                           90
  CLUS_3                         13                          107

Clustering(60) Variable = Del Peak 28(12q24.33) mutation analysis
D60V1, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                             0                               5
  CLUS_2                             0                               9
  CLUS_3                             5                               7
  CLUS_4                             1                               5
D60V2, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                             1                               6
  CLUS_2                             5                               8
  CLUS_3                             0                              12
D60V3, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            44                              78
  CLUS_2                            37                             120
  CLUS_3                             9                              61
  CLUS_4                             5                              49
D60V4, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            25                              53
  CLUS_2                            27                              85
  CLUS_3                            21                              91
D60V5, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            27                              62
  CLUS_2                            21                              54
  CLUS_3                             9                              62
D60V6, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                             6                              17
  CLUS_2                             7                              66
  CLUS_3                            29                              54
  CLUS_4                            15                              41
D60V7, multiclass
D60V8, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            46                             106
  CLUS_2                            12                              93
  CLUS_3                            25                              70
D60V9, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            48                             110
  CLUS_2                            29                             154
  CLUS_3                            16                              41
D60V10, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            54                             109
  CLUS_2                            28                              87
  CLUS_3                            11                             109

Clustering(61) Variable = Del Peak 29(13q12.11) mutation analysis
D61V1, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                             5                               0
  CLUS_2                             5                               4
  CLUS_3                             1                              11
  CLUS_4                             4                               2
D61V2, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                             5                               2
  CLUS_2                             2                              11
  CLUS_3                             8                               4
D61V3, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            96                              26
  CLUS_2                            47                             110
  CLUS_3                            47                              23
  CLUS_4                            35                              19
D61V4, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            35                              43
  CLUS_2                            74                              38
  CLUS_3                            63                              49
D61V5, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            58                              31
  CLUS_2                            30                              45
  CLUS_3                            44                              27
D61V6, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                             8                              15
  CLUS_2                            46                              27
  CLUS_3                            60                              23
  CLUS_4                            18                              38
D61V7, multiclass
D61V8, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            56                              96
  CLUS_2                            74                              31
  CLUS_3                            66                              29
D61V9, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            66                              92
  CLUS_2                           124                              59
  CLUS_3                            34                              23
D61V10, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            66                              97
  CLUS_2                            77                              38
  CLUS_3                            81                              39

Clustering(62) Variable = Del Peak 30(13q12.13) mutation analysis
D62V1, multiclass
        clus
vv       DEL PEAK 30(13Q12.13) MUTATED DEL PEAK 30(13Q12.13) WILD-TYPE
  CLUS_1                             4                               1
  CLUS_2                             5                               4
  CLUS_3                             1                              11
  CLUS_4                             4                               2
D62V2, multiclass
        clus
vv       DEL PEAK 30(13Q12.13) MUTATED DEL PEAK 30(13Q12.13) WILD-TYPE
  CLUS_1                             5                               2
  CLUS_2                             2                              11
  CLUS_3                             7                               5
D62V3, multiclass
        clus
vv       DEL PEAK 30(13Q12.13) MUTATED DEL PEAK 30(13Q12.13) WILD-TYPE
  CLUS_1                            98                              24
  CLUS_2                            45                             112
  CLUS_3                            45                              25
  CLUS_4                            36                              18
D62V4, multiclass
        clus
vv       DEL PEAK 30(13Q12.13) MUTATED DEL PEAK 30(13Q12.13) WILD-TYPE
  CLUS_1                            35                              43
  CLUS_2                            78                              34
  CLUS_3                            59                              53
D62V5, multiclass
        clus
vv       DEL PEAK 30(13Q12.13) MUTATED DEL PEAK 30(13Q12.13) WILD-TYPE
  CLUS_1                            59                              30
  CLUS_2                            29                              46
  CLUS_3                            45                              26
D62V6, multiclass
        clus
vv       DEL PEAK 30(13Q12.13) MUTATED DEL PEAK 30(13Q12.13) WILD-TYPE
  CLUS_1                             8                              15
  CLUS_2                            46                              27
  CLUS_3                            61                              22
  CLUS_4                            18                              38
D62V7, multiclass
D62V8, multiclass
        clus
vv       DEL PEAK 30(13Q12.13) MUTATED DEL PEAK 30(13Q12.13) WILD-TYPE
  CLUS_1                            57                              95
  CLUS_2                            73                              32
  CLUS_3                            67                              28
D62V9, multiclass
        clus
vv       DEL PEAK 30(13Q12.13) MUTATED DEL PEAK 30(13Q12.13) WILD-TYPE
  CLUS_1                            67                              91
  CLUS_2                           122                              61
  CLUS_3                            34                              23
D62V10, multiclass
        clus
vv       DEL PEAK 30(13Q12.13) MUTATED DEL PEAK 30(13Q12.13) WILD-TYPE
  CLUS_1                            67                              96
  CLUS_2                            75                              40
  CLUS_3                            81                              39

Clustering(63) Variable = Del Peak 31(13q34) mutation analysis
D63V1, multiclass
        clus
vv       DEL PEAK 31(13Q34) MUTATED DEL PEAK 31(13Q34) WILD-TYPE
  CLUS_1                          3                            2
  CLUS_2                          4                            5
  CLUS_3                          1                           11
  CLUS_4                          4                            2
D63V2, multiclass
        clus
vv       DEL PEAK 31(13Q34) MUTATED DEL PEAK 31(13Q34) WILD-TYPE
  CLUS_1                          5                            2
  CLUS_2                          2                           11
  CLUS_3                          5                            7
D63V3, multiclass
        clus
vv       DEL PEAK 31(13Q34) MUTATED DEL PEAK 31(13Q34) WILD-TYPE
  CLUS_1                         74                           48
  CLUS_2                         39                          118
  CLUS_3                         37                           33
  CLUS_4                         33                           21
D63V4, multiclass
        clus
vv       DEL PEAK 31(13Q34) MUTATED DEL PEAK 31(13Q34) WILD-TYPE
  CLUS_1                         29                           49
  CLUS_2                         56                           56
  CLUS_3                         51                           61
D63V5, multiclass
        clus
vv       DEL PEAK 31(13Q34) MUTATED DEL PEAK 31(13Q34) WILD-TYPE
  CLUS_1                         45                           44
  CLUS_2                         21                           54
  CLUS_3                         37                           34
D63V6, multiclass
        clus
vv       DEL PEAK 31(13Q34) MUTATED DEL PEAK 31(13Q34) WILD-TYPE
  CLUS_1                          7                           16
  CLUS_2                         42                           31
  CLUS_3                         41                           42
  CLUS_4                         13                           43
D63V7, multiclass
D63V8, multiclass
        clus
vv       DEL PEAK 31(13Q34) MUTATED DEL PEAK 31(13Q34) WILD-TYPE
  CLUS_1                         46                          106
  CLUS_2                         59                           46
  CLUS_3                         54                           41
D63V9, multiclass
        clus
vv       DEL PEAK 31(13Q34) MUTATED DEL PEAK 31(13Q34) WILD-TYPE
  CLUS_1                         54                          104
  CLUS_2                         96                           87
  CLUS_3                         30                           27
D63V10, multiclass
        clus
vv       DEL PEAK 31(13Q34) MUTATED DEL PEAK 31(13Q34) WILD-TYPE
  CLUS_1                         54                          109
  CLUS_2                         63                           52
  CLUS_3                         63                           57

Clustering(64) Variable = Del Peak 32(14q32.33) mutation analysis
D64V1, multiclass
        clus
vv       DEL PEAK 32(14Q32.33) MUTATED DEL PEAK 32(14Q32.33) WILD-TYPE
  CLUS_1                             1                               4
  CLUS_2                             3                               6
  CLUS_3                             3                               9
  CLUS_4                             3                               3
D64V2, multiclass
        clus
vv       DEL PEAK 32(14Q32.33) MUTATED DEL PEAK 32(14Q32.33) WILD-TYPE
  CLUS_1                             4                               3
  CLUS_2                             3                              10
  CLUS_3                             3                               9
D64V3, multiclass
        clus
vv       DEL PEAK 32(14Q32.33) MUTATED DEL PEAK 32(14Q32.33) WILD-TYPE
  CLUS_1                            37                              85
  CLUS_2                            38                             119
  CLUS_3                            34                              36
  CLUS_4                            11                              43
D64V4, multiclass
        clus
vv       DEL PEAK 32(14Q32.33) MUTATED DEL PEAK 32(14Q32.33) WILD-TYPE
  CLUS_1                            20                              58
  CLUS_2                            39                              73
  CLUS_3                            31                              81
D64V5, multiclass
        clus
vv       DEL PEAK 32(14Q32.33) MUTATED DEL PEAK 32(14Q32.33) WILD-TYPE
  CLUS_1                            25                              64
  CLUS_2                            18                              57
  CLUS_3                            27                              44
D64V6, multiclass
        clus
vv       DEL PEAK 32(14Q32.33) MUTATED DEL PEAK 32(14Q32.33) WILD-TYPE
  CLUS_1                             6                              17
  CLUS_2                            30                              43
  CLUS_3                            20                              63
  CLUS_4                            14                              42
D64V7, multiclass
D64V8, multiclass
        clus
vv       DEL PEAK 32(14Q32.33) MUTATED DEL PEAK 32(14Q32.33) WILD-TYPE
  CLUS_1                            38                             114
  CLUS_2                            40                              65
  CLUS_3                            27                              68
D64V9, multiclass
        clus
vv       DEL PEAK 32(14Q32.33) MUTATED DEL PEAK 32(14Q32.33) WILD-TYPE
  CLUS_1                            44                             114
  CLUS_2                            66                             117
  CLUS_3                            10                              47
D64V10, multiclass
        clus
vv       DEL PEAK 32(14Q32.33) MUTATED DEL PEAK 32(14Q32.33) WILD-TYPE
  CLUS_1                            41                             122
  CLUS_2                            38                              77
  CLUS_3                            41                              79

Clustering(65) Variable = Del Peak 33(15q11.2) mutation analysis
D65V1, multiclass
        clus
vv       DEL PEAK 33(15Q11.2) MUTATED DEL PEAK 33(15Q11.2) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                            7                              2
  CLUS_3                            4                              8
  CLUS_4                            4                              2
D65V2, multiclass
        clus
vv       DEL PEAK 33(15Q11.2) MUTATED DEL PEAK 33(15Q11.2) WILD-TYPE
  CLUS_1                            5                              2
  CLUS_2                            5                              8
  CLUS_3                            9                              3
D65V3, multiclass
        clus
vv       DEL PEAK 33(15Q11.2) MUTATED DEL PEAK 33(15Q11.2) WILD-TYPE
  CLUS_1                           85                             37
  CLUS_2                           46                            111
  CLUS_3                           34                             36
  CLUS_4                           35                             19
D65V4, multiclass
        clus
vv       DEL PEAK 33(15Q11.2) MUTATED DEL PEAK 33(15Q11.2) WILD-TYPE
  CLUS_1                           31                             47
  CLUS_2                           68                             44
  CLUS_3                           51                             61
D65V5, multiclass
        clus
vv       DEL PEAK 33(15Q11.2) MUTATED DEL PEAK 33(15Q11.2) WILD-TYPE
  CLUS_1                           50                             39
  CLUS_2                           32                             43
  CLUS_3                           37                             34
D65V6, multiclass
        clus
vv       DEL PEAK 33(15Q11.2) MUTATED DEL PEAK 33(15Q11.2) WILD-TYPE
  CLUS_1                           10                             13
  CLUS_2                           38                             35
  CLUS_3                           55                             28
  CLUS_4                           16                             40
D65V7, multiclass
D65V8, multiclass
        clus
vv       DEL PEAK 33(15Q11.2) MUTATED DEL PEAK 33(15Q11.2) WILD-TYPE
  CLUS_1                           59                             93
  CLUS_2                           49                             56
  CLUS_3                           71                             24
D65V9, multiclass
        clus
vv       DEL PEAK 33(15Q11.2) MUTATED DEL PEAK 33(15Q11.2) WILD-TYPE
  CLUS_1                           63                             95
  CLUS_2                          108                             75
  CLUS_3                           27                             30
D65V10, multiclass
        clus
vv       DEL PEAK 33(15Q11.2) MUTATED DEL PEAK 33(15Q11.2) WILD-TYPE
  CLUS_1                           61                            102
  CLUS_2                           70                             45
  CLUS_3                           67                             53

Clustering(66) Variable = Del Peak 34(15q15.3) mutation analysis
D66V1, multiclass
        clus
vv       DEL PEAK 34(15Q15.3) MUTATED DEL PEAK 34(15Q15.3) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                            7                              2
  CLUS_3                            4                              8
  CLUS_4                            5                              1
D66V2, multiclass
        clus
vv       DEL PEAK 34(15Q15.3) MUTATED DEL PEAK 34(15Q15.3) WILD-TYPE
  CLUS_1                            6                              1
  CLUS_2                            5                              8
  CLUS_3                            9                              3
D66V3, multiclass
        clus
vv       DEL PEAK 34(15Q15.3) MUTATED DEL PEAK 34(15Q15.3) WILD-TYPE
  CLUS_1                           86                             36
  CLUS_2                           45                            112
  CLUS_3                           37                             33
  CLUS_4                           37                             17
D66V4, multiclass
        clus
vv       DEL PEAK 34(15Q15.3) MUTATED DEL PEAK 34(15Q15.3) WILD-TYPE
  CLUS_1                           29                             49
  CLUS_2                           70                             42
  CLUS_3                           53                             59
D66V5, multiclass
        clus
vv       DEL PEAK 34(15Q15.3) MUTATED DEL PEAK 34(15Q15.3) WILD-TYPE
  CLUS_1                           52                             37
  CLUS_2                           32                             43
  CLUS_3                           40                             31
D66V6, multiclass
        clus
vv       DEL PEAK 34(15Q15.3) MUTATED DEL PEAK 34(15Q15.3) WILD-TYPE
  CLUS_1                            8                             15
  CLUS_2                           41                             32
  CLUS_3                           59                             24
  CLUS_4                           16                             40
D66V7, multiclass
D66V8, multiclass
        clus
vv       DEL PEAK 34(15Q15.3) MUTATED DEL PEAK 34(15Q15.3) WILD-TYPE
  CLUS_1                           59                             93
  CLUS_2                           54                             51
  CLUS_3                           72                             23
D66V9, multiclass
        clus
vv       DEL PEAK 34(15Q15.3) MUTATED DEL PEAK 34(15Q15.3) WILD-TYPE
  CLUS_1                           61                             97
  CLUS_2                          113                             70
  CLUS_3                           29                             28
D66V10, multiclass
        clus
vv       DEL PEAK 34(15Q15.3) MUTATED DEL PEAK 34(15Q15.3) WILD-TYPE
  CLUS_1                           57                            106
  CLUS_2                           73                             42
  CLUS_3                           73                             47

Clustering(67) Variable = Del Peak 35(16q23.3) mutation analysis
D67V1, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                            2                              7
  CLUS_3                            3                              9
  CLUS_4                            2                              4
D67V2, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                            3                              4
  CLUS_2                            3                             10
  CLUS_3                            5                              7
D67V3, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                           54                             68
  CLUS_2                           34                            123
  CLUS_3                           31                             39
  CLUS_4                           26                             28
D67V4, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                           18                             60
  CLUS_2                           47                             65
  CLUS_3                           44                             68
D67V5, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                           32                             57
  CLUS_2                           19                             56
  CLUS_3                           34                             37
D67V6, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                            6                             17
  CLUS_2                           34                             39
  CLUS_3                           31                             52
  CLUS_4                           14                             42
D67V7, multiclass
D67V8, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                           33                            119
  CLUS_2                           46                             59
  CLUS_3                           48                             47
D67V9, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                           45                            113
  CLUS_2                           79                            104
  CLUS_3                           21                             36
D67V10, multiclass
        clus
vv       DEL PEAK 35(16Q23.3) MUTATED DEL PEAK 35(16Q23.3) WILD-TYPE
  CLUS_1                           45                            118
  CLUS_2                           43                             72
  CLUS_3                           57                             63

Clustering(68) Variable = Del Peak 36(17p13.3) mutation analysis
D68V1, multiclass
        clus
vv       DEL PEAK 36(17P13.3) MUTATED DEL PEAK 36(17P13.3) WILD-TYPE
  CLUS_1                            5                              0
  CLUS_2                            6                              3
  CLUS_3                            7                              5
  CLUS_4                            5                              1
D68V2, multiclass
        clus
vv       DEL PEAK 36(17P13.3) MUTATED DEL PEAK 36(17P13.3) WILD-TYPE
  CLUS_1                            6                              1
  CLUS_2                            8                              5
  CLUS_3                            9                              3
D68V3, multiclass
        clus
vv       DEL PEAK 36(17P13.3) MUTATED DEL PEAK 36(17P13.3) WILD-TYPE
  CLUS_1                           92                             30
  CLUS_2                           53                            104
  CLUS_3                           46                             24
  CLUS_4                           32                             22
D68V4, multiclass
        clus
vv       DEL PEAK 36(17P13.3) MUTATED DEL PEAK 36(17P13.3) WILD-TYPE
  CLUS_1                           32                             46
  CLUS_2                           77                             35
  CLUS_3                           63                             49
D68V5, multiclass
        clus
vv       DEL PEAK 36(17P13.3) MUTATED DEL PEAK 36(17P13.3) WILD-TYPE
  CLUS_1                           59                             30
  CLUS_2                           36                             39
  CLUS_3                           45                             26
D68V6, multiclass
        clus
vv       DEL PEAK 36(17P13.3) MUTATED DEL PEAK 36(17P13.3) WILD-TYPE
  CLUS_1                           11                             12
  CLUS_2                           47                             26
  CLUS_3                           59                             24
  CLUS_4                           23                             33
D68V7, multiclass
D68V8, multiclass
        clus
vv       DEL PEAK 36(17P13.3) MUTATED DEL PEAK 36(17P13.3) WILD-TYPE
  CLUS_1                           67                             85
  CLUS_2                           65                             40
  CLUS_3                           71                             24
D68V9, multiclass
        clus
vv       DEL PEAK 36(17P13.3) MUTATED DEL PEAK 36(17P13.3) WILD-TYPE
  CLUS_1                           77                             81
  CLUS_2                          117                             66
  CLUS_3                           26                             31
D68V10, multiclass
        clus
vv       DEL PEAK 36(17P13.3) MUTATED DEL PEAK 36(17P13.3) WILD-TYPE
  CLUS_1                           74                             89
  CLUS_2                           69                             46
  CLUS_3                           77                             43

Clustering(69) Variable = Del Peak 37(18q21.32) mutation analysis
D69V1, multiclass
        clus
vv       DEL PEAK 37(18Q21.32) MUTATED DEL PEAK 37(18Q21.32) WILD-TYPE
  CLUS_1                             3                               2
  CLUS_2                             7                               2
  CLUS_3                             3                               9
  CLUS_4                             3                               3
D69V2, multiclass
        clus
vv       DEL PEAK 37(18Q21.32) MUTATED DEL PEAK 37(18Q21.32) WILD-TYPE
  CLUS_1                             4                               3
  CLUS_2                             4                               9
  CLUS_3                             8                               4
D69V3, multiclass
        clus
vv       DEL PEAK 37(18Q21.32) MUTATED DEL PEAK 37(18Q21.32) WILD-TYPE
  CLUS_1                            84                              38
  CLUS_2                            56                             101
  CLUS_3                            43                              27
  CLUS_4                            18                              36
D69V4, multiclass
        clus
vv       DEL PEAK 37(18Q21.32) MUTATED DEL PEAK 37(18Q21.32) WILD-TYPE
  CLUS_1                            42                              36
  CLUS_2                            61                              51
  CLUS_3                            55                              57
D69V5, multiclass
        clus
vv       DEL PEAK 37(18Q21.32) MUTATED DEL PEAK 37(18Q21.32) WILD-TYPE
  CLUS_1                            56                              33
  CLUS_2                            28                              47
  CLUS_3                            41                              30
D69V6, multiclass
        clus
vv       DEL PEAK 37(18Q21.32) MUTATED DEL PEAK 37(18Q21.32) WILD-TYPE
  CLUS_1                            12                              11
  CLUS_2                            41                              32
  CLUS_3                            53                              30
  CLUS_4                            19                              37
D69V7, multiclass
D69V8, multiclass
        clus
vv       DEL PEAK 37(18Q21.32) MUTATED DEL PEAK 37(18Q21.32) WILD-TYPE
  CLUS_1                            68                              84
  CLUS_2                            52                              53
  CLUS_3                            61                              34
D69V9, multiclass
        clus
vv       DEL PEAK 37(18Q21.32) MUTATED DEL PEAK 37(18Q21.32) WILD-TYPE
  CLUS_1                            67                              91
  CLUS_2                            97                              86
  CLUS_3                            34                              23
D69V10, multiclass
        clus
vv       DEL PEAK 37(18Q21.32) MUTATED DEL PEAK 37(18Q21.32) WILD-TYPE
  CLUS_1                            69                              94
  CLUS_2                            68                              47
  CLUS_3                            61                              59

Clustering(70) Variable = Del Peak 38(18q23) mutation analysis
D70V1, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                          3                            2
  CLUS_2                          8                            1
  CLUS_3                          3                            9
  CLUS_4                          3                            3
D70V2, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                          4                            3
  CLUS_2                          4                            9
  CLUS_3                          9                            3
D70V3, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         84                           38
  CLUS_2                         52                          105
  CLUS_3                         42                           28
  CLUS_4                         18                           36
D70V4, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         40                           38
  CLUS_2                         58                           54
  CLUS_3                         53                           59
D70V5, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         53                           36
  CLUS_2                         27                           48
  CLUS_3                         39                           32
D70V6, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         12                           11
  CLUS_2                         39                           34
  CLUS_3                         51                           32
  CLUS_4                         17                           39
D70V7, multiclass
D70V8, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         64                           88
  CLUS_2                         48                           57
  CLUS_3                         63                           32
D70V9, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         63                           95
  CLUS_2                         96                           87
  CLUS_3                         34                           23
D70V10, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         65                           98
  CLUS_2                         70                           45
  CLUS_3                         58                           62

Clustering(71) Variable = Del Peak 39(19p13.3) mutation analysis
D71V1, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            4                              5
  CLUS_3                            5                              7
  CLUS_4                            4                              2
D71V2, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                            4                              3
  CLUS_2                            6                              7
  CLUS_3                            4                              8
D71V3, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           65                             57
  CLUS_2                           58                             99
  CLUS_3                           58                             12
  CLUS_4                           35                             19
D71V4, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           36                             42
  CLUS_2                           70                             42
  CLUS_3                           63                             49
D71V5, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           48                             41
  CLUS_2                           42                             33
  CLUS_3                           45                             26
D71V6, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           12                             11
  CLUS_2                           48                             25
  CLUS_3                           46                             37
  CLUS_4                           29                             27
D71V7, multiclass
D71V8, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           61                             91
  CLUS_2                           81                             24
  CLUS_3                           52                             43
D71V9, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           67                             91
  CLUS_2                          122                             61
  CLUS_3                           22                             35
D71V10, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           66                             97
  CLUS_2                           62                             53
  CLUS_3                           83                             37

Clustering(72) Variable = Del Peak 40(19p13.2) mutation analysis
D72V1, multiclass
        clus
vv       DEL PEAK 40(19P13.2) MUTATED DEL PEAK 40(19P13.2) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            5                              4
  CLUS_3                            5                              7
  CLUS_4                            3                              3
D72V2, multiclass
        clus
vv       DEL PEAK 40(19P13.2) MUTATED DEL PEAK 40(19P13.2) WILD-TYPE
  CLUS_1                            3                              4
  CLUS_2                            6                              7
  CLUS_3                            5                              7
D72V3, multiclass
        clus
vv       DEL PEAK 40(19P13.2) MUTATED DEL PEAK 40(19P13.2) WILD-TYPE
  CLUS_1                           62                             60
  CLUS_2                           54                            103
  CLUS_3                           55                             15
  CLUS_4                           36                             18
D72V4, multiclass
        clus
vv       DEL PEAK 40(19P13.2) MUTATED DEL PEAK 40(19P13.2) WILD-TYPE
  CLUS_1                           34                             44
  CLUS_2                           71                             41
  CLUS_3                           56                             56
D72V5, multiclass
        clus
vv       DEL PEAK 40(19P13.2) MUTATED DEL PEAK 40(19P13.2) WILD-TYPE
  CLUS_1                           43                             46
  CLUS_2                           40                             35
  CLUS_3                           43                             28
D72V6, multiclass
        clus
vv       DEL PEAK 40(19P13.2) MUTATED DEL PEAK 40(19P13.2) WILD-TYPE
  CLUS_1                           11                             12
  CLUS_2                           47                             26
  CLUS_3                           41                             42
  CLUS_4                           27                             29
D72V7, multiclass
D72V8, multiclass
        clus
vv       DEL PEAK 40(19P13.2) MUTATED DEL PEAK 40(19P13.2) WILD-TYPE
  CLUS_1                           59                             93
  CLUS_2                           75                             30
  CLUS_3                           52                             43
D72V9, multiclass
        clus
vv       DEL PEAK 40(19P13.2) MUTATED DEL PEAK 40(19P13.2) WILD-TYPE
  CLUS_1                           65                             93
  CLUS_2                          118                             65
  CLUS_3                           19                             38
D72V10, multiclass
        clus
vv       DEL PEAK 40(19P13.2) MUTATED DEL PEAK 40(19P13.2) WILD-TYPE
  CLUS_1                           62                            101
  CLUS_2                           56                             59
  CLUS_3                           84                             36

Clustering(73) Variable = Del Peak 41(19q11) mutation analysis
D73V1, multiclass
        clus
vv       DEL PEAK 41(19Q11) MUTATED DEL PEAK 41(19Q11) WILD-TYPE
  CLUS_1                          1                            4
  CLUS_2                          2                            7
  CLUS_3                          4                            8
  CLUS_4                          2                            4
D73V2, multiclass
        clus
vv       DEL PEAK 41(19Q11) MUTATED DEL PEAK 41(19Q11) WILD-TYPE
  CLUS_1                          2                            5
  CLUS_2                          5                            8
  CLUS_3                          2                           10
D73V3, multiclass
        clus
vv       DEL PEAK 41(19Q11) MUTATED DEL PEAK 41(19Q11) WILD-TYPE
  CLUS_1                         51                           71
  CLUS_2                         25                          132
  CLUS_3                         24                           46
  CLUS_4                         14                           40
D73V4, multiclass
        clus
vv       DEL PEAK 41(19Q11) MUTATED DEL PEAK 41(19Q11) WILD-TYPE
  CLUS_1                         16                           62
  CLUS_2                         35                           77
  CLUS_3                         34                           78
D73V5, multiclass
        clus
vv       DEL PEAK 41(19Q11) MUTATED DEL PEAK 41(19Q11) WILD-TYPE
  CLUS_1                         30                           59
  CLUS_2                         16                           59
  CLUS_3                         26                           45
D73V6, multiclass
        clus
vv       DEL PEAK 41(19Q11) MUTATED DEL PEAK 41(19Q11) WILD-TYPE
  CLUS_1                          5                           18
  CLUS_2                         24                           49
  CLUS_3                         32                           51
  CLUS_4                         11                           45
D73V7, multiclass
D73V8, multiclass
        clus
vv       DEL PEAK 41(19Q11) MUTATED DEL PEAK 41(19Q11) WILD-TYPE
  CLUS_1                         27                          125
  CLUS_2                         36                           69
  CLUS_3                         38                           57
D73V9, multiclass
        clus
vv       DEL PEAK 41(19Q11) MUTATED DEL PEAK 41(19Q11) WILD-TYPE
  CLUS_1                         30                          128
  CLUS_2                         64                          119
  CLUS_3                         16                           41
D73V10, multiclass
        clus
vv       DEL PEAK 41(19Q11) MUTATED DEL PEAK 41(19Q11) WILD-TYPE
  CLUS_1                         31                          132
  CLUS_2                         43                           72
  CLUS_3                         36                           84

Clustering(74) Variable = Del Peak 42(19q13.33) mutation analysis
D74V1, multiclass
        clus
vv       DEL PEAK 42(19Q13.33) MUTATED DEL PEAK 42(19Q13.33) WILD-TYPE
  CLUS_1                             2                               3
  CLUS_2                             6                               3
  CLUS_3                             3                               9
  CLUS_4                             3                               3
D74V2, multiclass
        clus
vv       DEL PEAK 42(19Q13.33) MUTATED DEL PEAK 42(19Q13.33) WILD-TYPE
  CLUS_1                             3                               4
  CLUS_2                             4                               9
  CLUS_3                             7                               5
D74V3, multiclass
        clus
vv       DEL PEAK 42(19Q13.33) MUTATED DEL PEAK 42(19Q13.33) WILD-TYPE
  CLUS_1                            59                              63
  CLUS_2                            32                             125
  CLUS_3                            31                              39
  CLUS_4                            25                              29
D74V4, multiclass
        clus
vv       DEL PEAK 42(19Q13.33) MUTATED DEL PEAK 42(19Q13.33) WILD-TYPE
  CLUS_1                            27                              51
  CLUS_2                            45                              67
  CLUS_3                            32                              80
D74V5, multiclass
        clus
vv       DEL PEAK 42(19Q13.33) MUTATED DEL PEAK 42(19Q13.33) WILD-TYPE
  CLUS_1                            40                              49
  CLUS_2                            23                              52
  CLUS_3                            30                              41
D74V6, multiclass
        clus
vv       DEL PEAK 42(19Q13.33) MUTATED DEL PEAK 42(19Q13.33) WILD-TYPE
  CLUS_1                             8                              15
  CLUS_2                            28                              45
  CLUS_3                            38                              45
  CLUS_4                            19                              37
D74V7, multiclass
D74V8, multiclass
        clus
vv       DEL PEAK 42(19Q13.33) MUTATED DEL PEAK 42(19Q13.33) WILD-TYPE
  CLUS_1                            43                             109
  CLUS_2                            45                              60
  CLUS_3                            43                              52
D74V9, multiclass
        clus
vv       DEL PEAK 42(19Q13.33) MUTATED DEL PEAK 42(19Q13.33) WILD-TYPE
  CLUS_1                            38                             120
  CLUS_2                            84                              99
  CLUS_3                            21                              36
D74V10, multiclass
        clus
vv       DEL PEAK 42(19Q13.33) MUTATED DEL PEAK 42(19Q13.33) WILD-TYPE
  CLUS_1                            37                             126
  CLUS_2                            48                              67
  CLUS_3                            58                              62

Clustering(75) Variable = Del Peak 43(21q11.2) mutation analysis
D75V1, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            2                              7
  CLUS_3                            1                             11
  CLUS_4                            4                              2
D75V2, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                            4                              3
  CLUS_2                            1                             12
  CLUS_3                            3                              9
D75V3, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           27                             95
  CLUS_2                           44                            113
  CLUS_3                           43                             27
  CLUS_4                           26                             28
D75V4, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           12                             66
  CLUS_2                           52                             60
  CLUS_3                           40                             72
D75V5, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           24                             65
  CLUS_2                           23                             52
  CLUS_3                           37                             34
D75V6, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                            5                             18
  CLUS_2                           42                             31
  CLUS_3                           21                             62
  CLUS_4                           16                             40
D75V7, multiclass
D75V8, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           30                            122
  CLUS_2                           60                             45
  CLUS_3                           33                             62
D75V9, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           35                            123
  CLUS_2                           84                             99
  CLUS_3                           18                             39
D75V10, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           37                            126
  CLUS_2                           39                             76
  CLUS_3                           61                             59

Clustering(76) Variable = Del Peak 44(22q13.32) mutation analysis
D76V1, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                             3                               2
  CLUS_2                             6                               3
  CLUS_3                             2                              10
  CLUS_4                             4                               2
D76V2, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                             4                               3
  CLUS_2                             3                              10
  CLUS_3                             8                               4
D76V3, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            65                              57
  CLUS_2                            42                             115
  CLUS_3                            45                              25
  CLUS_4                            42                              12
D76V4, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            19                              59
  CLUS_2                            74                              38
  CLUS_3                            52                              60
D76V5, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            41                              48
  CLUS_2                            30                              45
  CLUS_3                            46                              25
D76V6, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            11                              12
  CLUS_2                            45                              28
  CLUS_3                            41                              42
  CLUS_4                            20                              36
D76V7, multiclass
D76V8, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            46                             106
  CLUS_2                            71                              34
  CLUS_3                            53                              42
D76V9, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            58                             100
  CLUS_2                           111                              72
  CLUS_3                            22                              35
D76V10, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            51                             112
  CLUS_2                            62                              53
  CLUS_3                            78                              42

Clustering(77) Variable = Del Peak 45(Xp22.2) mutation analysis
D77V1, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                           2                             7
  CLUS_3                           4                             8
  CLUS_4                           3                             3
D77V2, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                           3                             4
  CLUS_2                           4                             9
  CLUS_3                           4                             8
D77V3, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          53                            69
  CLUS_2                          22                           135
  CLUS_3                          24                            46
  CLUS_4                          18                            36
D77V4, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          19                            59
  CLUS_2                          44                            68
  CLUS_3                          27                            85
D77V5, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          30                            59
  CLUS_2                          14                            61
  CLUS_3                          25                            46
D77V6, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                           7                            16
  CLUS_2                          24                            49
  CLUS_3                          29                            54
  CLUS_4                           9                            47
D77V7, multiclass
D77V8, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          31                           121
  CLUS_2                          32                            73
  CLUS_3                          40                            55
D77V9, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          42                           116
  CLUS_2                          58                           125
  CLUS_3                          15                            42
D77V10, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          42                           121
  CLUS_2                          36                            79
  CLUS_3                          37                            83
                     V1                      V2                      V3 
            "MRNA_CNMF"    "MRNA_CHIERARCHICAL"               "CN_CNMF" 
                     V4                      V5                      V6 
     "METHLYATION_CNMF"             "RPPA_CNMF"    "RPPA_CHIERARCHICAL" 
                     V7                      V8                      V9 
         "MRNASEQ_CNMF" "MRNASEQ_CHIERARCHICAL"           "MIRSEQ_CNMF" 
                    V10 
 "MIRSEQ_CHIERARCHICAL" 
> q(save="no")
