
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Cnvs_onlysig.47.4101/CNV2ClinicalAnalysis_nozzle_onlysig_focal.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Cnvs_onlysig.47.4101/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/351852/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/PRAD-TP/2589023/1.GDAC_clinicalDataPicker.Finished/PRAD-TP.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=PRAD-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=PRAD-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=148, in cluster file=177, common to both=146
[1] "Reduce the number of clustering variables from 44 to 43."
[1]  43 146
[1] "Amp Peak  1(1q21.3) mutation analysis"
[1] 3
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                            9                           137 
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                            9                           137 
[1] "Amp Peak  2(3q26.2) mutation analysis"
[1] 3
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                           23                           123 
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                           23                           123 
[1] "Amp Peak  3(7p15.3) mutation analysis"
[1] 3
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                           29                           117 
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                           29                           117 
[1] "Amp Peak  4(8p11.22) mutation analysis"
[1] 3
  AMP PEAK  4(8P11.22) MUTATED AMP PEAK  4(8P11.22) WILD-TYPE 
                            15                            131 
  AMP PEAK  4(8P11.22) MUTATED AMP PEAK  4(8P11.22) WILD-TYPE 
                            15                            131 
[1] "Amp Peak  5(8q21.13) mutation analysis"
[1] 3
  AMP PEAK  5(8Q21.13) MUTATED AMP PEAK  5(8Q21.13) WILD-TYPE 
                            37                            109 
  AMP PEAK  5(8Q21.13) MUTATED AMP PEAK  5(8Q21.13) WILD-TYPE 
                            37                            109 
[1] "Amp Peak  6(10q21.2) mutation analysis"
[1] 3
  AMP PEAK  6(10Q21.2) MUTATED AMP PEAK  6(10Q21.2) WILD-TYPE 
                             7                            139 
  AMP PEAK  6(10Q21.2) MUTATED AMP PEAK  6(10Q21.2) WILD-TYPE 
                             7                            139 
[1] "Amp Peak  7(12q24.32) mutation analysis"
[1] 3
  AMP PEAK  7(12Q24.32) MUTATED AMP PEAK  7(12Q24.32) WILD-TYPE 
                              7                             139 
  AMP PEAK  7(12Q24.32) MUTATED AMP PEAK  7(12Q24.32) WILD-TYPE 
                              7                             139 
[1] "Amp Peak  8(14q21.1) mutation analysis"
[1] 3
  AMP PEAK  8(14Q21.1) MUTATED AMP PEAK  8(14Q21.1) WILD-TYPE 
                             6                            140 
  AMP PEAK  8(14Q21.1) MUTATED AMP PEAK  8(14Q21.1) WILD-TYPE 
                             6                            140 
[1] "Amp Peak 10(Xp22.11) mutation analysis"
[1] 3
  AMP PEAK 10(XP22.11) MUTATED AMP PEAK 10(XP22.11) WILD-TYPE 
                             4                            142 
  AMP PEAK 10(XP22.11) MUTATED AMP PEAK 10(XP22.11) WILD-TYPE 
                             4                            142 
[1] "Amp Peak 11(Xp21.1) mutation analysis"
[1] 3
  AMP PEAK 11(XP21.1) MUTATED AMP PEAK 11(XP21.1) WILD-TYPE 
                            4                           142 
  AMP PEAK 11(XP21.1) MUTATED AMP PEAK 11(XP21.1) WILD-TYPE 
                            4                           142 
[1] "Amp Peak 12(Xq21.1) mutation analysis"
[1] 3
  AMP PEAK 12(XQ21.1) MUTATED AMP PEAK 12(XQ21.1) WILD-TYPE 
                            7                           139 
  AMP PEAK 12(XQ21.1) MUTATED AMP PEAK 12(XQ21.1) WILD-TYPE 
                            7                           139 
[1] "Amp Peak 13(Xq21.1) mutation analysis"
[1] 3
  AMP PEAK 13(XQ21.1) MUTATED AMP PEAK 13(XQ21.1) WILD-TYPE 
                            5                           141 
  AMP PEAK 13(XQ21.1) MUTATED AMP PEAK 13(XQ21.1) WILD-TYPE 
                            5                           141 
[1] "Amp Peak 14(Xq21.31) mutation analysis"
[1] 3
  AMP PEAK 14(XQ21.31) MUTATED AMP PEAK 14(XQ21.31) WILD-TYPE 
                             5                            141 
  AMP PEAK 14(XQ21.31) MUTATED AMP PEAK 14(XQ21.31) WILD-TYPE 
                             5                            141 
[1] "Amp Peak 15(Xq25) mutation analysis"
[1] 3
  AMP PEAK 15(XQ25) MUTATED AMP PEAK 15(XQ25) WILD-TYPE 
                          3                         143 
  AMP PEAK 15(XQ25) MUTATED AMP PEAK 15(XQ25) WILD-TYPE 
                          3                         143 
[1] "Amp Peak 16(Xq25) mutation analysis"
[1] 3
  AMP PEAK 16(XQ25) MUTATED AMP PEAK 16(XQ25) WILD-TYPE 
                          6                         140 
  AMP PEAK 16(XQ25) MUTATED AMP PEAK 16(XQ25) WILD-TYPE 
                          6                         140 
[1] "Amp Peak 17(Xq27.1) mutation analysis"
[1] 3
  AMP PEAK 17(XQ27.1) MUTATED AMP PEAK 17(XQ27.1) WILD-TYPE 
                            9                           137 
  AMP PEAK 17(XQ27.1) MUTATED AMP PEAK 17(XQ27.1) WILD-TYPE 
                            9                           137 
[1] "Del Peak  1(1p31.3) mutation analysis"
[1] 3
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                           19                           127 
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                           19                           127 
[1] "Del Peak  2(1p21.3) mutation analysis"
[1] 3
  DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE 
                           13                           133 
  DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE 
                           13                           133 
[1] "Del Peak  3(1q23.1) mutation analysis"
[1] 3
  DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE 
                            5                           141 
  DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE 
                            5                           141 
[1] "Del Peak  4(1q42.13) mutation analysis"
[1] 3
  DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE 
                            14                            132 
  DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE 
                            14                            132 
[1] "Del Peak  5(2q22.1) mutation analysis"
[1] 3
  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                           19                           127 
  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                           19                           127 
[1] "Del Peak  6(2q22.3) mutation analysis"
[1] 3
  DEL PEAK  6(2Q22.3) MUTATED DEL PEAK  6(2Q22.3) WILD-TYPE 
                           18                           128 
  DEL PEAK  6(2Q22.3) MUTATED DEL PEAK  6(2Q22.3) WILD-TYPE 
                           18                           128 
[1] "Del Peak  7(3p13) mutation analysis"
[1] 3
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                         26                         120 
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                         26                         120 
[1] "Del Peak  8(3q29) mutation analysis"
[1] 3
  DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE 
                          9                         137 
  DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE 
                          9                         137 
[1] "Del Peak  9(4q28.1) mutation analysis"
[1] 3
  DEL PEAK  9(4Q28.1) MUTATED DEL PEAK  9(4Q28.1) WILD-TYPE 
                           11                           135 
  DEL PEAK  9(4Q28.1) MUTATED DEL PEAK  9(4Q28.1) WILD-TYPE 
                           11                           135 
[1] "Del Peak 10(5q11.2) mutation analysis"
[1] 3
  DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE 
                           23                           123 
  DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE 
                           23                           123 
[1] "Del Peak 11(5q21.1) mutation analysis"
[1] 3
  DEL PEAK 11(5Q21.1) MUTATED DEL PEAK 11(5Q21.1) WILD-TYPE 
                           26                           120 
  DEL PEAK 11(5Q21.1) MUTATED DEL PEAK 11(5Q21.1) WILD-TYPE 
                           26                           120 
[1] "Del Peak 12(6q15) mutation analysis"
[1] 3
  DEL PEAK 12(6Q15) MUTATED DEL PEAK 12(6Q15) WILD-TYPE 
                         49                          97 
  DEL PEAK 12(6Q15) MUTATED DEL PEAK 12(6Q15) WILD-TYPE 
                         49                          97 
[1] "Del Peak 13(7q36.1) mutation analysis"
[1] 3
  DEL PEAK 13(7Q36.1) MUTATED DEL PEAK 13(7Q36.1) WILD-TYPE 
                            5                           141 
  DEL PEAK 13(7Q36.1) MUTATED DEL PEAK 13(7Q36.1) WILD-TYPE 
                            5                           141 
[1] "Del Peak 14(8p21.3) mutation analysis"
[1] 3
  DEL PEAK 14(8P21.3) MUTATED DEL PEAK 14(8P21.3) WILD-TYPE 
                           87                            59 
  DEL PEAK 14(8P21.3) MUTATED DEL PEAK 14(8P21.3) WILD-TYPE 
                           87                            59 
[1] "Del Peak 15(8p11.21) mutation analysis"
[1] 3
  DEL PEAK 15(8P11.21) MUTATED DEL PEAK 15(8P11.21) WILD-TYPE 
                            47                             99 
  DEL PEAK 15(8P11.21) MUTATED DEL PEAK 15(8P11.21) WILD-TYPE 
                            47                             99 
[1] "Del Peak 16(10q23.31) mutation analysis"
[1] 3
  DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE 
                             53                              93 
  DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE 
                             53                              93 
[1] "Del Peak 17(11q23.2) mutation analysis"
[1] 3
  DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE 
                            16                            130 
  DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE 
                            16                            130 
[1] "Del Peak 18(12p13.2) mutation analysis"
[1] 3
  DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE 
                            31                            115 
  DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE 
                            31                            115 
[1] "Del Peak 19(13q14.13) mutation analysis"
[1] 3
  DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE 
                             68                              78 
  DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE 
                             68                              78 
[1] "Del Peak 20(16q22.3) mutation analysis"
[1] 3
  DEL PEAK 20(16Q22.3) MUTATED DEL PEAK 20(16Q22.3) WILD-TYPE 
                            45                            101 
  DEL PEAK 20(16Q22.3) MUTATED DEL PEAK 20(16Q22.3) WILD-TYPE 
                            45                            101 
[1] "Del Peak 21(16q24.1) mutation analysis"
[1] 3
  DEL PEAK 21(16Q24.1) MUTATED DEL PEAK 21(16Q24.1) WILD-TYPE 
                            58                             88 
  DEL PEAK 21(16Q24.1) MUTATED DEL PEAK 21(16Q24.1) WILD-TYPE 
                            58                             88 
[1] "Del Peak 22(17p13.1) mutation analysis"
[1] 3
  DEL PEAK 22(17P13.1) MUTATED DEL PEAK 22(17P13.1) WILD-TYPE 
                            39                            107 
  DEL PEAK 22(17P13.1) MUTATED DEL PEAK 22(17P13.1) WILD-TYPE 
                            39                            107 
[1] "Del Peak 23(17q21.31) mutation analysis"
[1] 3
  DEL PEAK 23(17Q21.31) MUTATED DEL PEAK 23(17Q21.31) WILD-TYPE 
                             26                             120 
  DEL PEAK 23(17Q21.31) MUTATED DEL PEAK 23(17Q21.31) WILD-TYPE 
                             26                             120 
[1] "Del Peak 24(18q22.1) mutation analysis"
[1] 3
  DEL PEAK 24(18Q22.1) MUTATED DEL PEAK 24(18Q22.1) WILD-TYPE 
                            37                            109 
  DEL PEAK 24(18Q22.1) MUTATED DEL PEAK 24(18Q22.1) WILD-TYPE 
                            37                            109 
[1] "Del Peak 25(18q23) mutation analysis"
[1] 3
  DEL PEAK 25(18Q23) MUTATED DEL PEAK 25(18Q23) WILD-TYPE 
                          43                          103 
  DEL PEAK 25(18Q23) MUTATED DEL PEAK 25(18Q23) WILD-TYPE 
                          43                          103 
[1] "Del Peak 26(21q22.2) mutation analysis"
[1] 3
  DEL PEAK 26(21Q22.2) MUTATED DEL PEAK 26(21Q22.2) WILD-TYPE 
                            48                             98 
  DEL PEAK 26(21Q22.2) MUTATED DEL PEAK 26(21Q22.2) WILD-TYPE 
                            48                             98 
[1] "Del Peak 27(21q22.3) mutation analysis"
[1] 3
  DEL PEAK 27(21Q22.3) MUTATED DEL PEAK 27(21Q22.3) WILD-TYPE 
                            46                            100 
  DEL PEAK 27(21Q22.3) MUTATED DEL PEAK 27(21Q22.3) WILD-TYPE 
                            46                            100 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "VITALSTATUS"                           
 [5] "DCCUPLOADDATE"                         
 [6] "PRIMARYSITEOFDESEASE"                  
 [7] "GENDER"                                
 [8] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
 [9] "DAYSTOLASTKNOWNALIVE"                  
[10] "HISTOLOGICALTYPE"                      
[11] "RADIATIONS.RADIATION.REGIMENINDICATION"
[12] "BATCHNUMBER"                           

Input Data has 12 rows and 146 columns.

[1] "Batch" "12"   
[1] "Last Follow UP"
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
          91          212          671           31          395          424 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
          60          731           31          395         1065          942 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
          31           62           28         1339          365           31 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
         700           31          458          731           62          395 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
         485          820          303          974         1004           91 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
         881          378          605          594          396          536 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
         532          729          244          530          229          447 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
         356          182          907         1096          737          788 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 
         782          724         1061          783          849         1195 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
        1153          842         1403          834          790          567 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
         397         1272          724          910          519          821 
TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 
        1490         1860          295          289          285          233 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 
         175          170          191            9          169           64 
TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 
         131          167          258           79           52           70 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 
         217          526           43          284          187           32 
TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 
         923         2328         1925         1669         1649         1338 
TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 
         554         1144         1215          847         1000         1008 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
         822          993          841          804          101          875 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
         851          806          846          505          518          664 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 
         390          356         1442         1014         1109          674 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 
         457          486          451          324          512           31 
TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7213 
          NA          162           89           61           30           60 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 
          51           72           30           63           53           51 
TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 
          57           61           34         2315         1949         1899 
TCGA-HI-7171 TCGA-J4-8198 
          NA           98 
Variable 1:'AGE':	nDistinctValues=28,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=129,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=TRUE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=7,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 10:'HISTOLOGICAL.TYPE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'BATCH.NUMBER':	nDistinctValues=8,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                                   
[2] "RADIATIONS.RADIATION.REGIMENINDICATION"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 146 columns, 1 survival variables, and 2 non-survival variables.
AGE, nv=28, binary=FALSE, numeric=TRUE
RADIATIONS.RADIATION.REGIMENINDICATION, nv=2, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1q21.3) mutation analysis
D1V1, survival
                               sevent
clus2                             0   1
  AMP PEAK  1(1Q21.3) MUTATED     9   0
  AMP PEAK  1(1Q21.3) WILD-TYPE 136   1
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                            9                           137 
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                            0                             1 
$`AMP PEAK  1(1Q21.3) MUTATED`
TCGA-EJ-5501 TCGA-EJ-5519 TCGA-EJ-5525 TCGA-EJ-7784 TCGA-EJ-7788 TCGA-G9-6362 
       23.97        37.91        25.97         5.49         1.71        27.02 
TCGA-HC-7080 TCGA-HC-7213 TCGA-HI-7168 
        2.01         1.97        65.92 

$`AMP PEAK  1(1Q21.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       17.49         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 
        5.98        29.82        36.03        24.23        25.91        25.71 
TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5521 
       23.80        34.88        25.74        27.91        39.29        27.68 
TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 
       46.13        27.42        18.64        13.05        41.82        23.80 
TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       29.92        17.06        26.99        48.99        61.15         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 
        0.30         5.56         2.10         4.31         8.48         2.60 
TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        2.30         7.13        17.29         1.41         9.34         6.15 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       33.14        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       27.98        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 
       12.82        11.70        47.41        33.34        36.46        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 
       15.02        15.98        14.83        10.65        16.83         1.02 
TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7231 
       65.98         5.33         2.93         0.99         1.68         2.37 
TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 
        0.99         2.07         1.74         1.68         1.87         2.01 
TCGA-HC-7750 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
        1.12        64.08        62.43        66.02         3.22 

  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                         1.71                          0.30 
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                        65.92                         66.02 
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                        23.97                         16.60 
[1] "1.7 - 65.9 (24.0)" "0.3 - 66.0 (16.6)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
[1] "hr=" "1"  
D1V2, continuous
D1V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  1(1Q21.3) MUTATED      0    9
  AMP PEAK  1(1Q21.3) WILD-TYPE    5  132
     clus
vv    AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE
  NO                            0                             5
  YES                           9                           132

Clustering(2) Variable = Amp Peak  2(3q26.2) mutation analysis
D2V1, survival
                               sevent
clus2                             0   1
  AMP PEAK  2(3Q26.2) MUTATED    23   0
  AMP PEAK  2(3Q26.2) WILD-TYPE 122   1
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                           23                           123 
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                            0                             1 
$`AMP PEAK  2(3Q26.2) MUTATED`
TCGA-CH-5739 TCGA-CH-5751 TCGA-CH-5754 TCGA-CH-5788 TCGA-CH-5791 TCGA-EJ-5497 
       22.06        35.01         2.04        26.96        33.01        13.02 
TCGA-EJ-5505 TCGA-EJ-5510 TCGA-EJ-5514 TCGA-EJ-5518 TCGA-EJ-5521 TCGA-EJ-5527 
       14.70        24.23        23.80        39.29        27.68        13.05 
TCGA-EJ-5531 TCGA-EJ-5542 TCGA-EJ-7330 TCGA-EJ-7782 TCGA-EJ-7792 TCGA-G9-6338 
       23.80        17.06         6.28         2.10        17.29        54.21 
TCGA-G9-6363 TCGA-G9-6366 TCGA-G9-6499 TCGA-G9-7521 TCGA-HC-7211 
       32.65         3.32        36.46        15.98         0.99 

$`AMP PEAK  2(3Q26.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5744 
        2.99         6.97         1.02        12.99        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 TCGA-CH-5761 
       24.03         1.02        12.99        30.97         1.02         0.92 
TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 
       44.02        12.00         1.02        23.01         1.02        15.06 
TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5789 TCGA-CH-5790 
       24.03         2.04        12.99        15.95         9.96        32.02 
TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5498 
        2.99        28.96        12.43        19.89        19.53        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5506 
       17.49        23.97         8.02        17.42         7.53        11.70 
TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 
        5.98        29.82        36.03        25.91        25.71        34.88 
TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 
       25.74        27.91        37.91        46.13        27.42        25.97 
TCGA-EJ-5526 TCGA-EJ-5530 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       18.64        41.82        29.92        26.99        48.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
        9.70         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 
        0.30         5.56         4.31         5.49         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        1.71         2.30         7.13         1.41         9.34         6.15 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6342 
        1.05        30.35        65.92        63.29        54.87        43.99 
TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 
       18.21        37.61        39.95        27.85        32.88        33.14 
TCGA-G9-6362 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       27.02        27.65        26.43        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 
       27.81        16.60        17.03        21.83        12.82        11.70 
TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7523 
       47.41        33.34        22.16        15.02        14.83        10.65 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 
       16.83         1.02        65.98         5.33         2.93         2.01 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        1.97         1.68         2.37         0.99         2.07         1.74 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 
        1.68         1.87         2.01         1.12        65.92        64.08 
TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       62.43        66.02         3.22 

  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                         0.99                          0.30 
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                        54.21                         66.02 
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                        22.06                         15.06 
[1] "1.0 - 54.2 (22.1)" "0.3 - 66.0 (15.1)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
[1] "hr=" "1"  
D2V2, continuous
D2V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  2(3Q26.2) MUTATED      0   23
  AMP PEAK  2(3Q26.2) WILD-TYPE    5  118
     clus
vv    AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE
  NO                            0                             5
  YES                          23                           118

Clustering(3) Variable = Amp Peak  3(7p15.3) mutation analysis
D3V1, survival
                               sevent
clus2                             0   1
  AMP PEAK  3(7P15.3) MUTATED    28   1
  AMP PEAK  3(7P15.3) WILD-TYPE 117   0
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                           29                           117 
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                            1                             0 
$`AMP PEAK  3(7P15.3) MUTATED`
TCGA-CH-5751 TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5772 
       35.01         2.04        44.02        24.03        12.99        15.95 
TCGA-CH-5788 TCGA-CH-5791 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5509 TCGA-EJ-5542 
       26.96        33.01        12.43        19.89        36.03        17.06 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7330 TCGA-EJ-7784 TCGA-EJ-7789 TCGA-G9-6338 
       61.15         9.70         6.28         5.49         2.30        54.21 
TCGA-G9-6366 TCGA-G9-6371 TCGA-G9-6377 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7523 
        3.32        27.81        17.03        33.34        36.46        10.65 
TCGA-HC-7078 TCGA-HC-7213 TCGA-HI-7168 TCGA-HI-7171 TCGA-J4-8198 
        5.33         1.97        65.92        66.02         3.22 

$`AMP PEAK  3(7P15.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5761 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 
        0.92        12.00         1.02        23.01         1.02        15.06 
TCGA-CH-5769 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5496 
        2.04         9.96        32.02         2.99        28.96        19.53 
TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 
       13.02        17.62        17.49        23.97         8.02        17.42 
TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5510 
        7.53        14.70        11.70         5.98        29.82        24.23 
TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 
       25.91        25.71        23.80        34.88        25.74        27.91 
TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 
       39.29        37.91        27.68        46.13        27.42        25.97 
TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 
       18.64        13.05        41.82        23.80        29.92        26.99 
TCGA-EJ-7123 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
       48.99         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 
        0.30         5.56         2.10         4.31         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        1.71         7.13        17.29         1.41         9.34         6.15 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6342 
        1.05        30.35        65.92        63.29        54.87        43.99 
TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 
       18.21        37.61        39.95        27.85        32.88        33.14 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6367 TCGA-G9-6369 
       27.02        32.65        27.65        26.43        28.77        27.98 
TCGA-G9-6370 TCGA-G9-6373 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       26.50        16.60        21.83        12.82        11.70        47.41 
TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7525 TCGA-H9-7775 
       22.16        15.02        15.98        14.83        16.83         1.02 
TCGA-HC-7077 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7231 
       65.98         2.93         2.01         0.99         1.68         2.37 
TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 
        0.99         2.07         1.74         1.68         1.87         2.01 
TCGA-HC-7750 TCGA-HI-7169 TCGA-HI-7170 
        1.12        64.08        62.43 

  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                         1.97                          0.30 
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                        66.02                         65.98 
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                        17.06                         15.98 
[1] "2.0 - 66.0 (17.1)" "0.3 - 66.0 (16.0)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
[1] "hr=" "1"  
D3V2, continuous
D3V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  3(7P15.3) MUTATED      2   27
  AMP PEAK  3(7P15.3) WILD-TYPE    3  114
     clus
vv    AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE
  NO                            2                             3
  YES                          27                           114

Clustering(4) Variable = Amp Peak  4(8p11.22) mutation analysis
D4V1, survival
                                sevent
clus2                              0   1
  AMP PEAK  4(8P11.22) MUTATED    15   0
  AMP PEAK  4(8P11.22) WILD-TYPE 130   1
  AMP PEAK  4(8P11.22) MUTATED AMP PEAK  4(8P11.22) WILD-TYPE 
                            15                            131 
  AMP PEAK  4(8P11.22) MUTATED AMP PEAK  4(8P11.22) WILD-TYPE 
                             0                              1 
$`AMP PEAK  4(8P11.22) MUTATED`
TCGA-CH-5751 TCGA-CH-5767 TCGA-CH-5788 TCGA-EJ-5504 TCGA-EJ-5509 TCGA-EJ-5511 
       35.01        15.06        26.96         7.53        36.03        25.91 
TCGA-EJ-5514 TCGA-EJ-5526 TCGA-EJ-7125 TCGA-EJ-7781 TCGA-EJ-7784 TCGA-G9-6366 
       23.80        18.64        61.15         5.56         5.49         3.32 
TCGA-G9-6373 TCGA-G9-6499 TCGA-HC-7213 
       16.60        36.46         1.97 

$`AMP PEAK  4(8P11.22) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 
        2.04         0.92        44.02        12.00         1.02        23.01 
TCGA-CH-5766 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5789 
        1.02        24.03         2.04        12.99        15.95         9.96 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 
       32.02        33.01         2.99        28.96        12.43        19.89 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5510 
       17.42        14.70        11.70         5.98        29.82        24.23 
TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 
       25.71        34.88        25.74        27.91        39.29        37.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5527 TCGA-EJ-5530 
       27.68        46.13        27.42        25.97        13.05        41.82 
TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7314 
       23.80        29.92        17.06        26.99        48.99         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 
        0.30         2.10         4.31         8.48         2.60         1.71 
TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        2.30         7.13        17.29         1.41         9.34         6.15 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6367 
       33.14        27.02        32.65        27.65        26.43        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 
       27.98        26.50        27.81        17.03        21.83        12.82 
TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 
       11.70        47.41        33.34        22.16        15.02        15.98 
TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 
       14.83        10.65        16.83         1.02        65.98         5.33 
TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 
        2.93         2.01         0.99         1.68         2.37         0.99 
TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 
        2.07         1.74         1.68         1.87         2.01         1.12 
TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       65.92        64.08        62.43        66.02         3.22 

  AMP PEAK  4(8P11.22) MUTATED AMP PEAK  4(8P11.22) WILD-TYPE 
                          1.97                           0.30 
  AMP PEAK  4(8P11.22) MUTATED AMP PEAK  4(8P11.22) WILD-TYPE 
                         61.15                          66.02 
  AMP PEAK  4(8P11.22) MUTATED AMP PEAK  4(8P11.22) WILD-TYPE 
                         18.64                          15.98 
[1] "2.0 - 61.1 (18.6)" "0.3 - 66.0 (16.0)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK  4(8P11.22) MUTATED" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK  4(8P11.22) WILD-TYPE"   "AMP PEAK  4(8P11.22) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  4(8P11.22) WILD-TYPE" "AMP PEAK  4(8P11.22) WILD-TYPE" 
[1] "hr=" "1"  
D4V2, continuous
D4V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  4(8P11.22) MUTATED      0   15
  AMP PEAK  4(8P11.22) WILD-TYPE    5  126
     clus
vv    AMP PEAK  4(8P11.22) MUTATED AMP PEAK  4(8P11.22) WILD-TYPE
  NO                             0                              5
  YES                           15                            126

Clustering(5) Variable = Amp Peak  5(8q21.13) mutation analysis
D5V1, survival
                                sevent
clus2                              0   1
  AMP PEAK  5(8Q21.13) MUTATED    36   1
  AMP PEAK  5(8Q21.13) WILD-TYPE 109   0
  AMP PEAK  5(8Q21.13) MUTATED AMP PEAK  5(8Q21.13) WILD-TYPE 
                            37                            109 
  AMP PEAK  5(8Q21.13) MUTATED AMP PEAK  5(8Q21.13) WILD-TYPE 
                             1                              0 
$`AMP PEAK  5(8Q21.13) MUTATED`
TCGA-CH-5739 TCGA-CH-5751 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5767 
       22.06        35.01         1.02         2.04         0.92        15.06 
TCGA-CH-5771 TCGA-EJ-5504 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5511 TCGA-EJ-5514 
       12.99         7.53        29.82        36.03        25.91        23.80 
TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5521 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 
       27.91        39.29        27.68        25.97        18.64        13.05 
TCGA-EJ-5532 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7781 TCGA-EJ-7784 TCGA-EJ-7789 
       29.92        48.99        61.15         5.56         5.49         2.30 
TCGA-G9-6332 TCGA-G9-6366 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6494 TCGA-G9-6499 
       65.92         3.32        16.60        17.03        47.41        36.46 
TCGA-G9-7510 TCGA-G9-7521 TCGA-HC-7078 TCGA-HC-7080 TCGA-HC-7213 TCGA-HI-7168 
       22.16        15.98         5.33         2.01         1.97        65.92 
TCGA-HI-7171 
       66.02 

$`AMP PEAK  5(8Q21.13) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5744 
        2.99         6.97         1.02        12.99        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5762 TCGA-CH-5763 
       24.03         1.02        12.99        30.97        44.02        12.00 
TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5772 
        1.02        23.01         1.02        24.03         2.04        15.95 
TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 
       26.96         9.96        32.02        33.01         2.99        28.96 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 
       12.43        19.89        19.53        13.02        17.62        17.49 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 
       23.97         8.02        17.42        14.70        11.70         5.98 
TCGA-EJ-5510 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5519 TCGA-EJ-5522 
       24.23        25.71        34.88        25.74        37.91        46.13 
TCGA-EJ-5524 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7314 
       27.42        41.82        23.80        17.06        26.99         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 
        0.30         2.10         4.31         8.48         2.60         1.71 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 
        7.13        17.29         1.41         9.34         6.15         1.05 
TCGA-G9-6329 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 
       30.35        63.29        54.87        54.21        43.99        18.21 
TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 
       37.61        39.95        27.85        32.88        33.14        27.02 
TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       32.65        27.65        26.43        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6496 TCGA-G9-7519 
       27.81        21.83        12.82        11.70        33.34        15.02 
TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7079 
       14.83        10.65        16.83         1.02        65.98         2.93 
TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        0.99         1.68         2.37         0.99         2.07         1.74 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7169 TCGA-HI-7170 
        1.68         1.87         2.01         1.12        64.08        62.43 
TCGA-J4-8198 
        3.22 

  AMP PEAK  5(8Q21.13) MUTATED AMP PEAK  5(8Q21.13) WILD-TYPE 
                          0.92                           0.30 
  AMP PEAK  5(8Q21.13) MUTATED AMP PEAK  5(8Q21.13) WILD-TYPE 
                         66.02                          65.98 
  AMP PEAK  5(8Q21.13) MUTATED AMP PEAK  5(8Q21.13) WILD-TYPE 
                         22.06                          14.83 
[1] "0.9 - 66.0 (22.1)" "0.3 - 66.0 (14.8)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK  5(8Q21.13) MUTATED"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK  5(8Q21.13) WILD-TYPE"   "AMP PEAK  5(8Q21.13) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  5(8Q21.13) WILD-TYPE" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "AMP PEAK  5(8Q21.13) MUTATED" "AMP PEAK  5(8Q21.13) WILD-TYPE" 
[1] "hr=" "1"  
D5V2, continuous
D5V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  5(8Q21.13) MUTATED      0   37
  AMP PEAK  5(8Q21.13) WILD-TYPE    5  104
     clus
vv    AMP PEAK  5(8Q21.13) MUTATED AMP PEAK  5(8Q21.13) WILD-TYPE
  NO                             0                              5
  YES                           37                            104

Clustering(6) Variable = Amp Peak  6(10q21.2) mutation analysis
D6V1, survival
                                sevent
clus2                              0   1
  AMP PEAK  6(10Q21.2) MUTATED     7   0
  AMP PEAK  6(10Q21.2) WILD-TYPE 138   1
  AMP PEAK  6(10Q21.2) MUTATED AMP PEAK  6(10Q21.2) WILD-TYPE 
                             7                            139 
  AMP PEAK  6(10Q21.2) MUTATED AMP PEAK  6(10Q21.2) WILD-TYPE 
                             0                              1 
$`AMP PEAK  6(10Q21.2) MUTATED`
TCGA-CH-5761 TCGA-CH-5765 TCGA-CH-5788 TCGA-EJ-5514 TCGA-EJ-5524 TCGA-HC-7078 
        0.92        23.01        26.96        23.80        27.42         5.33 
TCGA-HC-7231 
        2.37 

$`AMP PEAK  6(10Q21.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5766 
        1.02         2.04        44.02        12.00         1.02         1.02 
TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5789 
       15.06        24.03         2.04        12.99        15.95         9.96 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 
       32.02        33.01         2.99        28.96        12.43        19.89 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 
       17.42         7.53        14.70        11.70         5.98        29.82 
TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 
       36.03        24.23        25.91        25.71        34.88        25.74 
TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5525 
       27.91        39.29        37.91        27.68        46.13        25.97 
TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 
       18.64        13.05        41.82        23.80        29.92        17.06 
TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 
       26.99        48.99        61.15         9.70         9.50         9.37 
TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 
        7.66         5.75         5.59         6.28         0.30         5.56 
TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 
        2.10         4.31         5.49         8.48         2.60         1.71 
TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        2.30         7.13        17.29         1.41         9.34         6.15 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 
       33.14        27.02        32.65        27.65        26.43         3.32 
TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 
       28.77        27.98        26.50        27.81        16.60        17.03 
TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 
       21.83        12.82        11.70        47.41        33.34        36.46 
TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 
       22.16        15.02        15.98        14.83        10.65        16.83 
TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7213 
        1.02        65.98         2.93         2.01         0.99         1.97 
TCGA-HC-7230 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 
        1.68         0.99         2.07         1.74         1.68         1.87 
TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        2.01         1.12        65.92        64.08        62.43        66.02 
TCGA-J4-8198 
        3.22 

  AMP PEAK  6(10Q21.2) MUTATED AMP PEAK  6(10Q21.2) WILD-TYPE 
                          0.92                           0.30 
  AMP PEAK  6(10Q21.2) MUTATED AMP PEAK  6(10Q21.2) WILD-TYPE 
                         27.42                          66.02 
  AMP PEAK  6(10Q21.2) MUTATED AMP PEAK  6(10Q21.2) WILD-TYPE 
                         23.01                          16.60 
[1] "0.9 - 27.4 (23.0)" "0.3 - 66.0 (16.6)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK  6(10Q21.2) MUTATED" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "AMP PEAK  6(10Q21.2) MUTATED" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK  6(10Q21.2) MUTATED" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "AMP PEAK  6(10Q21.2) MUTATED" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK  6(10Q21.2) MUTATED" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "AMP PEAK  6(10Q21.2) MUTATED" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK  6(10Q21.2) WILD-TYPE"   "AMP PEAK  6(10Q21.2) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  6(10Q21.2) WILD-TYPE" "AMP PEAK  6(10Q21.2) WILD-TYPE" 
[1] "hr=" "1"  
D6V2, continuous
D6V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  6(10Q21.2) MUTATED      0    7
  AMP PEAK  6(10Q21.2) WILD-TYPE    5  134
     clus
vv    AMP PEAK  6(10Q21.2) MUTATED AMP PEAK  6(10Q21.2) WILD-TYPE
  NO                             0                              5
  YES                            7                            134

Clustering(7) Variable = Amp Peak  7(12q24.32) mutation analysis
D7V1, survival
                                 sevent
clus2                               0   1
  AMP PEAK  7(12Q24.32) MUTATED     6   1
  AMP PEAK  7(12Q24.32) WILD-TYPE 139   0
  AMP PEAK  7(12Q24.32) MUTATED AMP PEAK  7(12Q24.32) WILD-TYPE 
                              7                             139 
  AMP PEAK  7(12Q24.32) MUTATED AMP PEAK  7(12Q24.32) WILD-TYPE 
                              1                               0 
$`AMP PEAK  7(12Q24.32) MUTATED`
TCGA-CH-5751 TCGA-CH-5761 TCGA-CH-5762 TCGA-EJ-5510 TCGA-EJ-5514 TCGA-EJ-5519 
       35.01         0.92        44.02        24.23        23.80        37.91 
TCGA-HI-7171 
       66.02 

$`AMP PEAK  7(12Q24.32) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5754 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 
        2.04        12.00         1.02        23.01         1.02        15.06 
TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 
       24.03         2.04        12.99        15.95        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 
       32.02        33.01         2.99        28.96        12.43        19.89 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 
       17.42         7.53        14.70        11.70         5.98        29.82 
TCGA-EJ-5509 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 
       36.03        25.91        25.71        34.88        25.74        27.91 
TCGA-EJ-5518 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       39.29        27.68        46.13        27.42        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
       13.05        41.82        23.80        29.92        17.06        26.99 
TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 
       48.99        61.15         9.70         9.50         9.37         7.66 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 
        5.75         5.59         6.28         0.30         5.56         2.10 
TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 
        4.31         5.49         8.48         2.60         1.71         2.30 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 
        7.13        17.29         1.41         9.34         6.15         1.05 
TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 
       30.35        65.92        63.29        54.87        54.21        43.99 
TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 
       18.21        37.61        39.95        27.85        32.88        33.14 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       27.02        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       27.98        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 
       12.82        11.70        47.41        33.34        36.46        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 
       15.02        15.98        14.83        10.65        16.83         1.02 
TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7213 
       65.98         5.33         2.93         2.01         0.99         1.97 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 
        1.68         2.37         0.99         2.07         1.74         1.68 
TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 
        1.87         2.01         1.12        65.92        64.08        62.43 
TCGA-J4-8198 
        3.22 

  AMP PEAK  7(12Q24.32) MUTATED AMP PEAK  7(12Q24.32) WILD-TYPE 
                           0.92                            0.30 
  AMP PEAK  7(12Q24.32) MUTATED AMP PEAK  7(12Q24.32) WILD-TYPE 
                          66.02                           65.98 
  AMP PEAK  7(12Q24.32) MUTATED AMP PEAK  7(12Q24.32) WILD-TYPE 
                          35.01                           15.95 
[1] "0.9 - 66.0 (35.0)" "0.3 - 66.0 (15.9)"
                     TCGA-CH-5737                      TCGA-CH-5738 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "AMP PEAK  7(12Q24.32) MUTATED" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
  "AMP PEAK  7(12Q24.32) MUTATED"   "AMP PEAK  7(12Q24.32) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "AMP PEAK  7(12Q24.32) MUTATED" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"AMP PEAK  7(12Q24.32) WILD-TYPE"   "AMP PEAK  7(12Q24.32) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
  "AMP PEAK  7(12Q24.32) MUTATED" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-FC-7708 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7077                      TCGA-HC-7078 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7079                      TCGA-HC-7080 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7213 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7230                      TCGA-HC-7231 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7736                      TCGA-HC-7737 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7740                      TCGA-HC-7744 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7747                      TCGA-HC-7749 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7750                      TCGA-HI-7168 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "AMP PEAK  7(12Q24.32) MUTATED" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5737                      TCGA-CH-5738 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "AMP PEAK  7(12Q24.32) MUTATED" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
  "AMP PEAK  7(12Q24.32) MUTATED"   "AMP PEAK  7(12Q24.32) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "AMP PEAK  7(12Q24.32) MUTATED" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"AMP PEAK  7(12Q24.32) WILD-TYPE"   "AMP PEAK  7(12Q24.32) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
  "AMP PEAK  7(12Q24.32) MUTATED" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-FC-7708 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7077                      TCGA-HC-7078 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7079                      TCGA-HC-7080 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7213 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7230                      TCGA-HC-7231 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7736                      TCGA-HC-7737 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7740                      TCGA-HC-7744 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7747                      TCGA-HC-7749 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7750                      TCGA-HI-7168 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "AMP PEAK  7(12Q24.32) MUTATED" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5737                      TCGA-CH-5738 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "AMP PEAK  7(12Q24.32) MUTATED" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
  "AMP PEAK  7(12Q24.32) MUTATED"   "AMP PEAK  7(12Q24.32) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "AMP PEAK  7(12Q24.32) MUTATED" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"AMP PEAK  7(12Q24.32) WILD-TYPE"   "AMP PEAK  7(12Q24.32) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
  "AMP PEAK  7(12Q24.32) MUTATED" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-FC-7708 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7077                      TCGA-HC-7078 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7079                      TCGA-HC-7080 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7213 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7230                      TCGA-HC-7231 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7736                      TCGA-HC-7737 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7740                      TCGA-HC-7744 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7747                      TCGA-HC-7749 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7750                      TCGA-HI-7168 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"AMP PEAK  7(12Q24.32) WILD-TYPE" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "AMP PEAK  7(12Q24.32) MUTATED" "AMP PEAK  7(12Q24.32) WILD-TYPE" 
[1] "hr=" "1"  
D7V2, continuous
D7V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK  7(12Q24.32) MUTATED      1    6
  AMP PEAK  7(12Q24.32) WILD-TYPE    4  135
     clus
vv    AMP PEAK  7(12Q24.32) MUTATED AMP PEAK  7(12Q24.32) WILD-TYPE
  NO                              1                               4
  YES                             6                             135

Clustering(8) Variable = Amp Peak  8(14q21.1) mutation analysis
D8V1, survival
                                sevent
clus2                              0   1
  AMP PEAK  8(14Q21.1) MUTATED     6   0
  AMP PEAK  8(14Q21.1) WILD-TYPE 139   1
  AMP PEAK  8(14Q21.1) MUTATED AMP PEAK  8(14Q21.1) WILD-TYPE 
                             6                            140 
  AMP PEAK  8(14Q21.1) MUTATED AMP PEAK  8(14Q21.1) WILD-TYPE 
                             0                              1 
$`AMP PEAK  8(14Q21.1) MUTATED`
TCGA-CH-5752 TCGA-CH-5761 TCGA-EJ-5495 TCGA-EJ-5514 TCGA-EJ-7331 TCGA-G9-6366 
       30.97         0.92        19.89        23.80         0.30         3.32 

$`AMP PEAK  8(14Q21.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        35.01         1.02 
TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 
        2.04        44.02        12.00         1.02        23.01         1.02 
TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 
       15.06        24.03         2.04        12.99        15.95        26.96 
TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 
        9.96        32.02        33.01         2.99        28.96        12.43 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 
       17.42         7.53        14.70        11.70         5.98        29.82 
TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 
       36.03        24.23        25.91        25.71        34.88        25.74 
TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 
       27.91        39.29        37.91        27.68        46.13        27.42 
TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 
       25.97        18.64        13.05        41.82        23.80        29.92 
TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 
       17.06        26.99        48.99        61.15         9.70         9.50 
TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7781 
        9.37         7.66         5.75         5.59         6.28         5.56 
TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 
        2.10         4.31         5.49         8.48         2.60         1.71 
TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        2.30         7.13        17.29         1.41         9.34         6.15 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6367 
       33.14        27.02        32.65        27.65        26.43        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       27.98        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 
       12.82        11.70        47.41        33.34        36.46        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 
       15.02        15.98        14.83        10.65        16.83         1.02 
TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7213 
       65.98         5.33         2.93         2.01         0.99         1.97 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 
        1.68         2.37         0.99         2.07         1.74         1.68 
TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 
        1.87         2.01         1.12        65.92        64.08        62.43 
TCGA-HI-7171 TCGA-J4-8198 
       66.02         3.22 

  AMP PEAK  8(14Q21.1) MUTATED AMP PEAK  8(14Q21.1) WILD-TYPE 
                          0.30                           0.99 
  AMP PEAK  8(14Q21.1) MUTATED AMP PEAK  8(14Q21.1) WILD-TYPE 
                         30.97                          66.02 
  AMP PEAK  8(14Q21.1) MUTATED AMP PEAK  8(14Q21.1) WILD-TYPE 
                        11.605                         16.715 
[1] "0.3 - 31.0 (11.6)" "1.0 - 66.0 (16.7)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK  8(14Q21.1) WILD-TYPE"   "AMP PEAK  8(14Q21.1) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK  8(14Q21.1) MUTATED" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "AMP PEAK  8(14Q21.1) MUTATED" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  8(14Q21.1) WILD-TYPE"   "AMP PEAK  8(14Q21.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  8(14Q21.1) WILD-TYPE"   "AMP PEAK  8(14Q21.1) MUTATED" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  8(14Q21.1) MUTATED" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK  8(14Q21.1) WILD-TYPE"   "AMP PEAK  8(14Q21.1) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK  8(14Q21.1) MUTATED" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "AMP PEAK  8(14Q21.1) MUTATED" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  8(14Q21.1) WILD-TYPE"   "AMP PEAK  8(14Q21.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  8(14Q21.1) WILD-TYPE"   "AMP PEAK  8(14Q21.1) MUTATED" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  8(14Q21.1) MUTATED" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK  8(14Q21.1) WILD-TYPE"   "AMP PEAK  8(14Q21.1) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK  8(14Q21.1) MUTATED" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "AMP PEAK  8(14Q21.1) MUTATED" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  8(14Q21.1) WILD-TYPE"   "AMP PEAK  8(14Q21.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  8(14Q21.1) WILD-TYPE"   "AMP PEAK  8(14Q21.1) MUTATED" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  8(14Q21.1) MUTATED" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  8(14Q21.1) WILD-TYPE" "AMP PEAK  8(14Q21.1) WILD-TYPE" 
[1] "hr=" "1"  
D8V2, continuous
D8V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  8(14Q21.1) MUTATED      1    5
  AMP PEAK  8(14Q21.1) WILD-TYPE    4  136
     clus
vv    AMP PEAK  8(14Q21.1) MUTATED AMP PEAK  8(14Q21.1) WILD-TYPE
  NO                             1                              4
  YES                            5                            136

Clustering(9) Variable = Amp Peak 10(Xp22.11) mutation analysis
D9V1, survival
                                sevent
clus2                              0   1
  AMP PEAK 10(XP22.11) MUTATED     4   0
  AMP PEAK 10(XP22.11) WILD-TYPE 141   1
  AMP PEAK 10(XP22.11) MUTATED AMP PEAK 10(XP22.11) WILD-TYPE 
                             4                            142 
  AMP PEAK 10(XP22.11) MUTATED AMP PEAK 10(XP22.11) WILD-TYPE 
                             0                              1 
$`AMP PEAK 10(XP22.11) MUTATED`
TCGA-EJ-5502 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-7789 
        8.02        25.74        27.91         2.30 

$`AMP PEAK 10(XP22.11) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       17.49        23.97        17.42         7.53        14.70        11.70 
TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 
        5.98        29.82        36.03        24.23        25.91        25.71 
TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 
       23.80        34.88        39.29        37.91        27.68        46.13 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 
       27.42        25.97        18.64        13.05        41.82        23.80 
TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       29.92        17.06        26.99        48.99        61.15         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 
        2.60         1.71         7.13        17.29         1.41         9.34 
TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 
        6.15         1.05        30.35        65.92        63.29        54.87 
TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 
       54.21        43.99        18.21        37.61        39.95        27.85 
TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 
       32.88        33.14        27.02        32.65        27.65        26.43 
TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 
        3.32        28.77        27.98        26.50        27.81        16.60 
TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 
       17.03        21.83        12.82        11.70        47.41        33.34 
TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 
       36.46        22.16        15.02        15.98        14.83        10.65 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 
       16.83         1.02        65.98         5.33         2.93         2.01 
TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 
        0.99         1.97         1.68         2.37         0.99         2.07 
TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 
        1.74         1.68         1.87         2.01         1.12        65.92 
TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       64.08        62.43        66.02         3.22 

  AMP PEAK 10(XP22.11) MUTATED AMP PEAK 10(XP22.11) WILD-TYPE 
                           2.3                            0.3 
  AMP PEAK 10(XP22.11) MUTATED AMP PEAK 10(XP22.11) WILD-TYPE 
                         27.91                          66.02 
  AMP PEAK 10(XP22.11) MUTATED AMP PEAK 10(XP22.11) WILD-TYPE 
                        16.880                         16.715 
[1] "2.3 - 27.9 (16.9)" "0.3 - 66.0 (16.7)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
  "AMP PEAK 10(XP22.11) MUTATED" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 10(XP22.11) WILD-TYPE"   "AMP PEAK 10(XP22.11) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK 10(XP22.11) MUTATED" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 10(XP22.11) WILD-TYPE"   "AMP PEAK 10(XP22.11) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
  "AMP PEAK 10(XP22.11) MUTATED" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 10(XP22.11) WILD-TYPE"   "AMP PEAK 10(XP22.11) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK 10(XP22.11) MUTATED" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 10(XP22.11) WILD-TYPE"   "AMP PEAK 10(XP22.11) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
  "AMP PEAK 10(XP22.11) MUTATED" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 10(XP22.11) WILD-TYPE"   "AMP PEAK 10(XP22.11) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK 10(XP22.11) MUTATED" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 10(XP22.11) WILD-TYPE"   "AMP PEAK 10(XP22.11) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 10(XP22.11) WILD-TYPE" "AMP PEAK 10(XP22.11) WILD-TYPE" 
[1] "hr=" "1"  
D9V2, continuous
D9V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 10(XP22.11) MUTATED      0    4
  AMP PEAK 10(XP22.11) WILD-TYPE    5  137
     clus
vv    AMP PEAK 10(XP22.11) MUTATED AMP PEAK 10(XP22.11) WILD-TYPE
  NO                             0                              5
  YES                            4                            137

Clustering(10) Variable = Amp Peak 11(Xp21.1) mutation analysis
D10V1, survival
                               sevent
clus2                             0   1
  AMP PEAK 11(XP21.1) MUTATED     4   0
  AMP PEAK 11(XP21.1) WILD-TYPE 141   1
  AMP PEAK 11(XP21.1) MUTATED AMP PEAK 11(XP21.1) WILD-TYPE 
                            4                           142 
  AMP PEAK 11(XP21.1) MUTATED AMP PEAK 11(XP21.1) WILD-TYPE 
                            0                             1 
$`AMP PEAK 11(XP21.1) MUTATED`
TCGA-EJ-5495 TCGA-EJ-5499 TCGA-EJ-5530 TCGA-EJ-7789 
       19.89        17.49        41.82         2.30 

$`AMP PEAK 11(XP21.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5501 
       28.96        12.43        19.53        13.02        17.62        23.97 
TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 
        8.02        17.42         7.53        14.70        11.70         5.98 
TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 
       29.82        36.03        24.23        25.91        25.71        23.80 
TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 
       34.88        25.74        27.91        39.29        37.91        27.68 
TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5531 
       46.13        27.42        25.97        18.64        13.05        23.80 
TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       29.92        17.06        26.99        48.99        61.15         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 
        2.60         1.71         7.13        17.29         1.41         9.34 
TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 
        6.15         1.05        30.35        65.92        63.29        54.87 
TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 
       54.21        43.99        18.21        37.61        39.95        27.85 
TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 
       32.88        33.14        27.02        32.65        27.65        26.43 
TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 
        3.32        28.77        27.98        26.50        27.81        16.60 
TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 
       17.03        21.83        12.82        11.70        47.41        33.34 
TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 
       36.46        22.16        15.02        15.98        14.83        10.65 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 
       16.83         1.02        65.98         5.33         2.93         2.01 
TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 
        0.99         1.97         1.68         2.37         0.99         2.07 
TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 
        1.74         1.68         1.87         2.01         1.12        65.92 
TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       64.08        62.43        66.02         3.22 

  AMP PEAK 11(XP21.1) MUTATED AMP PEAK 11(XP21.1) WILD-TYPE 
                          2.3                           0.3 
  AMP PEAK 11(XP21.1) MUTATED AMP PEAK 11(XP21.1) WILD-TYPE 
                        41.82                         66.02 
  AMP PEAK 11(XP21.1) MUTATED AMP PEAK 11(XP21.1) WILD-TYPE 
                        18.69                         16.29 
[1] "2.3 - 41.8 (18.7)" "0.3 - 66.0 (16.3)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK 11(XP21.1) MUTATED" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "AMP PEAK 11(XP21.1) MUTATED" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 11(XP21.1) WILD-TYPE"   "AMP PEAK 11(XP21.1) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 11(XP21.1) WILD-TYPE"   "AMP PEAK 11(XP21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK 11(XP21.1) MUTATED" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "AMP PEAK 11(XP21.1) MUTATED" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 11(XP21.1) WILD-TYPE"   "AMP PEAK 11(XP21.1) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 11(XP21.1) WILD-TYPE"   "AMP PEAK 11(XP21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK 11(XP21.1) MUTATED" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "AMP PEAK 11(XP21.1) MUTATED" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 11(XP21.1) WILD-TYPE"   "AMP PEAK 11(XP21.1) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 11(XP21.1) WILD-TYPE"   "AMP PEAK 11(XP21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 11(XP21.1) WILD-TYPE" "AMP PEAK 11(XP21.1) WILD-TYPE" 
[1] "hr=" "1"  
D10V2, continuous
D10V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 11(XP21.1) MUTATED      0    4
  AMP PEAK 11(XP21.1) WILD-TYPE    5  137
     clus
vv    AMP PEAK 11(XP21.1) MUTATED AMP PEAK 11(XP21.1) WILD-TYPE
  NO                            0                             5
  YES                           4                           137

Clustering(11) Variable = Amp Peak 12(Xq21.1) mutation analysis
D11V1, survival
                               sevent
clus2                             0   1
  AMP PEAK 12(XQ21.1) MUTATED     7   0
  AMP PEAK 12(XQ21.1) WILD-TYPE 138   1
  AMP PEAK 12(XQ21.1) MUTATED AMP PEAK 12(XQ21.1) WILD-TYPE 
                            7                           139 
  AMP PEAK 12(XQ21.1) MUTATED AMP PEAK 12(XQ21.1) WILD-TYPE 
                            0                             1 
$`AMP PEAK 12(XQ21.1) MUTATED`
TCGA-EJ-5505 TCGA-EJ-5507 TCGA-EJ-5521 TCGA-EJ-5530 TCGA-EJ-5542 TCGA-EJ-7789 
       14.70         5.98        27.68        41.82        17.06         2.30 
TCGA-G9-6499 
       36.46 

$`AMP PEAK 12(XQ21.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5506 
       17.49        23.97         8.02        17.42         7.53        11.70 
TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 
       29.82        36.03        24.23        25.91        25.71        23.80 
TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5522 
       34.88        25.74        27.91        39.29        37.91        46.13 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5531 TCGA-EJ-5532 
       27.42        25.97        18.64        13.05        23.80        29.92 
TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 
       26.99        48.99        61.15         9.70         9.50         9.37 
TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 
        7.66         5.75         5.59         6.28         0.30         5.56 
TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 
        2.10         4.31         5.49         8.48         2.60         1.71 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 
        7.13        17.29         1.41         9.34         6.15         1.05 
TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 
       30.35        65.92        63.29        54.87        54.21        43.99 
TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 
       18.21        37.61        39.95        27.85        32.88        33.14 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       27.02        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       27.98        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 
       12.82        11.70        47.41        33.34        22.16        15.02 
TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 
       15.98        14.83        10.65        16.83         1.02        65.98 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 
        5.33         2.93         2.01         0.99         1.97         1.68 
TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 
        2.37         0.99         2.07         1.74         1.68         1.87 
TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        2.01         1.12        65.92        64.08        62.43        66.02 
TCGA-J4-8198 
        3.22 

  AMP PEAK 12(XQ21.1) MUTATED AMP PEAK 12(XQ21.1) WILD-TYPE 
                          2.3                           0.3 
  AMP PEAK 12(XQ21.1) MUTATED AMP PEAK 12(XQ21.1) WILD-TYPE 
                        41.82                         66.02 
  AMP PEAK 12(XQ21.1) MUTATED AMP PEAK 12(XQ21.1) WILD-TYPE 
                        17.06                         16.60 
[1] "2.3 - 41.8 (17.1)" "0.3 - 66.0 (16.6)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK 12(XQ21.1) MUTATED" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 12(XQ21.1) MUTATED" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK 12(XQ21.1) MUTATED" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 12(XQ21.1) MUTATED" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK 12(XQ21.1) MUTATED" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 12(XQ21.1) WILD-TYPE"   "AMP PEAK 12(XQ21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 12(XQ21.1) MUTATED" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 12(XQ21.1) WILD-TYPE" "AMP PEAK 12(XQ21.1) WILD-TYPE" 
[1] "hr=" "1"  
D11V2, continuous
D11V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 12(XQ21.1) MUTATED      0    7
  AMP PEAK 12(XQ21.1) WILD-TYPE    5  134
     clus
vv    AMP PEAK 12(XQ21.1) MUTATED AMP PEAK 12(XQ21.1) WILD-TYPE
  NO                            0                             5
  YES                           7                           134

Clustering(12) Variable = Amp Peak 13(Xq21.1) mutation analysis
D12V1, survival
                               sevent
clus2                             0   1
  AMP PEAK 13(XQ21.1) MUTATED     5   0
  AMP PEAK 13(XQ21.1) WILD-TYPE 140   1
  AMP PEAK 13(XQ21.1) MUTATED AMP PEAK 13(XQ21.1) WILD-TYPE 
                            5                           141 
  AMP PEAK 13(XQ21.1) MUTATED AMP PEAK 13(XQ21.1) WILD-TYPE 
                            0                             1 
$`AMP PEAK 13(XQ21.1) MUTATED`
TCGA-EJ-5519 TCGA-EJ-5531 TCGA-EJ-7789 TCGA-G9-6499 TCGA-HC-7737 
       37.91        23.80         2.30        36.46         2.07 

$`AMP PEAK 13(XQ21.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.49        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       11.70         5.98        29.82        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 
       25.71        23.80        34.88        25.74        27.91        39.29 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 
       27.68        46.13        27.42        25.97        18.64        13.05 
TCGA-EJ-5530 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       41.82        29.92        17.06        26.99        48.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
        9.70         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 
        6.28         0.30         5.56         2.10         4.31         5.49 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        8.48         2.60         1.71         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 
        9.34         6.15         1.05        30.35        65.92        63.29 
TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       54.87        54.21        43.99        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 
       33.34        22.16        15.02        15.98        14.83        10.65 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 
       16.83         1.02        65.98         5.33         2.93         2.01 
TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7740 
        0.99         1.97         1.68         2.37         0.99         1.74 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 
        1.68         1.87         2.01         1.12        65.92        64.08 
TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       62.43        66.02         3.22 

  AMP PEAK 13(XQ21.1) MUTATED AMP PEAK 13(XQ21.1) WILD-TYPE 
                         2.07                          0.30 
  AMP PEAK 13(XQ21.1) MUTATED AMP PEAK 13(XQ21.1) WILD-TYPE 
                        37.91                         66.02 
  AMP PEAK 13(XQ21.1) MUTATED AMP PEAK 13(XQ21.1) WILD-TYPE 
                         23.8                          16.6 
[1] "2.1 - 37.9 (23.8)" "0.3 - 66.0 (16.6)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "AMP PEAK 13(XQ21.1) MUTATED" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "AMP PEAK 13(XQ21.1) MUTATED" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 13(XQ21.1) WILD-TYPE"   "AMP PEAK 13(XQ21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 13(XQ21.1) MUTATED" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK 13(XQ21.1) WILD-TYPE"   "AMP PEAK 13(XQ21.1) MUTATED" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "AMP PEAK 13(XQ21.1) MUTATED" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "AMP PEAK 13(XQ21.1) MUTATED" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 13(XQ21.1) WILD-TYPE"   "AMP PEAK 13(XQ21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 13(XQ21.1) MUTATED" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK 13(XQ21.1) WILD-TYPE"   "AMP PEAK 13(XQ21.1) MUTATED" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "AMP PEAK 13(XQ21.1) MUTATED" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "AMP PEAK 13(XQ21.1) MUTATED" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 13(XQ21.1) WILD-TYPE"   "AMP PEAK 13(XQ21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 13(XQ21.1) MUTATED" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK 13(XQ21.1) WILD-TYPE"   "AMP PEAK 13(XQ21.1) MUTATED" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 13(XQ21.1) WILD-TYPE" "AMP PEAK 13(XQ21.1) WILD-TYPE" 
[1] "hr=" "1"  
D12V2, continuous
D12V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 13(XQ21.1) MUTATED      0    5
  AMP PEAK 13(XQ21.1) WILD-TYPE    5  136
     clus
vv    AMP PEAK 13(XQ21.1) MUTATED AMP PEAK 13(XQ21.1) WILD-TYPE
  NO                            0                             5
  YES                           5                           136

Clustering(13) Variable = Amp Peak 14(Xq21.31) mutation analysis
D13V1, survival
                                sevent
clus2                              0   1
  AMP PEAK 14(XQ21.31) MUTATED     5   0
  AMP PEAK 14(XQ21.31) WILD-TYPE 140   1
  AMP PEAK 14(XQ21.31) MUTATED AMP PEAK 14(XQ21.31) WILD-TYPE 
                             5                            141 
  AMP PEAK 14(XQ21.31) MUTATED AMP PEAK 14(XQ21.31) WILD-TYPE 
                             0                              1 
$`AMP PEAK 14(XQ21.31) MUTATED`
TCGA-EJ-5517 TCGA-EJ-5521 TCGA-EJ-5525 TCGA-EJ-7789 TCGA-G9-6499 
       27.91        27.68        25.97         2.30        36.46 

$`AMP PEAK 14(XQ21.31) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.49        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       11.70         5.98        29.82        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5518 TCGA-EJ-5519 
       25.71        23.80        34.88        25.74        39.29        37.91 
TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 
       46.13        27.42        18.64        13.05        41.82        23.80 
TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       29.92        17.06        26.99        48.99        61.15         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 
        2.60         1.71         7.13        17.29         1.41         9.34 
TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 
        6.15         1.05        30.35        65.92        63.29        54.87 
TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 
       54.21        43.99        18.21        37.61        39.95        27.85 
TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 
       32.88        33.14        27.02        32.65        27.65        26.43 
TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 
        3.32        28.77        27.98        26.50        27.81        16.60 
TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 
       17.03        21.83        12.82        11.70        47.41        33.34 
TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 
       22.16        15.02        15.98        14.83        10.65        16.83 
TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 
        1.02        65.98         5.33         2.93         2.01         0.99 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        1.97         1.68         2.37         0.99         2.07         1.74 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 
        1.68         1.87         2.01         1.12        65.92        64.08 
TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       62.43        66.02         3.22 

  AMP PEAK 14(XQ21.31) MUTATED AMP PEAK 14(XQ21.31) WILD-TYPE 
                           2.3                            0.3 
  AMP PEAK 14(XQ21.31) MUTATED AMP PEAK 14(XQ21.31) WILD-TYPE 
                         36.46                          66.02 
  AMP PEAK 14(XQ21.31) MUTATED AMP PEAK 14(XQ21.31) WILD-TYPE 
                         27.68                          15.98 
[1] "2.3 - 36.5 (27.7)" "0.3 - 66.0 (16.0)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK 14(XQ21.31) MUTATED" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 14(XQ21.31) WILD-TYPE"   "AMP PEAK 14(XQ21.31) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "AMP PEAK 14(XQ21.31) MUTATED" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 14(XQ21.31) WILD-TYPE"   "AMP PEAK 14(XQ21.31) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK 14(XQ21.31) MUTATED" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK 14(XQ21.31) MUTATED" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 14(XQ21.31) WILD-TYPE"   "AMP PEAK 14(XQ21.31) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "AMP PEAK 14(XQ21.31) MUTATED" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 14(XQ21.31) WILD-TYPE"   "AMP PEAK 14(XQ21.31) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK 14(XQ21.31) MUTATED" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK 14(XQ21.31) MUTATED" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 14(XQ21.31) WILD-TYPE"   "AMP PEAK 14(XQ21.31) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "AMP PEAK 14(XQ21.31) MUTATED" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 14(XQ21.31) WILD-TYPE"   "AMP PEAK 14(XQ21.31) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK 14(XQ21.31) MUTATED" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 14(XQ21.31) WILD-TYPE" "AMP PEAK 14(XQ21.31) WILD-TYPE" 
[1] "hr=" "1"  
D13V2, continuous
D13V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 14(XQ21.31) MUTATED      0    5
  AMP PEAK 14(XQ21.31) WILD-TYPE    5  136
     clus
vv    AMP PEAK 14(XQ21.31) MUTATED AMP PEAK 14(XQ21.31) WILD-TYPE
  NO                             0                              5
  YES                            5                            136

Clustering(14) Variable = Amp Peak 15(Xq25) mutation analysis
D14V1, survival
                             sevent
clus2                           0   1
  AMP PEAK 15(XQ25) MUTATED     3   0
  AMP PEAK 15(XQ25) WILD-TYPE 142   1
  AMP PEAK 15(XQ25) MUTATED AMP PEAK 15(XQ25) WILD-TYPE 
                          3                         143 
  AMP PEAK 15(XQ25) MUTATED AMP PEAK 15(XQ25) WILD-TYPE 
                          0                           1 
$`AMP PEAK 15(XQ25) MUTATED`
TCGA-EJ-7781 TCGA-EJ-7789 TCGA-G9-6499 
        5.56         2.30        36.46 

$`AMP PEAK 15(XQ25) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.49        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       11.70         5.98        29.82        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 
       25.71        23.80        34.88        25.74        27.91        39.29 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       37.91        27.68        46.13        27.42        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
       13.05        41.82        23.80        29.92        17.06        26.99 
TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 
       48.99        61.15         9.70         9.50         9.37         7.66 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 
        5.75         5.59         6.28         0.30         2.10         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 
        5.49         8.48         2.60         1.71         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
        1.41         9.34         6.15         1.05        30.35        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 
       63.29        54.87        54.21        43.99        18.21        37.61 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 
       39.95        27.85        32.88        33.14        27.02        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       27.65        26.43         3.32        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 
       27.81        16.60        17.03        21.83        12.82        11.70 
TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 
       47.41        33.34        22.16        15.02        15.98        14.83 
TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 
       10.65        16.83         1.02        65.98         5.33         2.93 
TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 
        2.01         0.99         1.97         1.68         2.37         0.99 
TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 
        2.07         1.74         1.68         1.87         2.01         1.12 
TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       65.92        64.08        62.43        66.02         3.22 

  AMP PEAK 15(XQ25) MUTATED AMP PEAK 15(XQ25) WILD-TYPE 
                        2.3                         0.3 
  AMP PEAK 15(XQ25) MUTATED AMP PEAK 15(XQ25) WILD-TYPE 
                      36.46                       66.02 
  AMP PEAK 15(XQ25) MUTATED AMP PEAK 15(XQ25) WILD-TYPE 
                       5.56                       16.83 
[1] "2.3 - 36.5 (5.6)"  "0.3 - 66.0 (16.8)"
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
  "AMP PEAK 15(XQ25) MUTATED" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 15(XQ25) WILD-TYPE"   "AMP PEAK 15(XQ25) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 15(XQ25) MUTATED" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7749 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
  "AMP PEAK 15(XQ25) MUTATED" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 15(XQ25) WILD-TYPE"   "AMP PEAK 15(XQ25) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 15(XQ25) MUTATED" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7749 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
  "AMP PEAK 15(XQ25) MUTATED" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 15(XQ25) WILD-TYPE"   "AMP PEAK 15(XQ25) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 15(XQ25) MUTATED" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7749 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 15(XQ25) WILD-TYPE" "AMP PEAK 15(XQ25) WILD-TYPE" 
[1] "hr=" "1"  
D14V2, continuous
D14V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 15(XQ25) MUTATED      0    3
  AMP PEAK 15(XQ25) WILD-TYPE    5  138
     clus
vv    AMP PEAK 15(XQ25) MUTATED AMP PEAK 15(XQ25) WILD-TYPE
  NO                          0                           5
  YES                         3                         138

Clustering(15) Variable = Amp Peak 16(Xq25) mutation analysis
D15V1, survival
                             sevent
clus2                           0   1
  AMP PEAK 16(XQ25) MUTATED     6   0
  AMP PEAK 16(XQ25) WILD-TYPE 139   1
  AMP PEAK 16(XQ25) MUTATED AMP PEAK 16(XQ25) WILD-TYPE 
                          6                         140 
  AMP PEAK 16(XQ25) MUTATED AMP PEAK 16(XQ25) WILD-TYPE 
                          0                           1 
$`AMP PEAK 16(XQ25) MUTATED`
TCGA-EJ-5499 TCGA-EJ-5505 TCGA-EJ-5522 TCGA-EJ-5526 TCGA-EJ-7789 TCGA-G9-6499 
       17.49        14.70        46.13        18.64         2.30        36.46 

$`AMP PEAK 16(XQ25) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5506 TCGA-EJ-5507 
       23.97         8.02        17.42         7.53        11.70         5.98 
TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 
       29.82        36.03        24.23        25.91        25.71        23.80 
TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 
       34.88        25.74        27.91        39.29        37.91        27.68 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 
       27.42        25.97        13.05        41.82        23.80        29.92 
TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 
       17.06        26.99        48.99        61.15         9.70         9.50 
TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 
        9.37         7.66         5.75         5.59         6.28         0.30 
TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 
        5.56         2.10         4.31         5.49         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        1.71         7.13        17.29         1.41         9.34         6.15 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 
       33.14        27.02        32.65        27.65        26.43         3.32 
TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 
       28.77        27.98        26.50        27.81        16.60        17.03 
TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 
       21.83        12.82        11.70        47.41        33.34        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 
       15.02        15.98        14.83        10.65        16.83         1.02 
TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7213 
       65.98         5.33         2.93         2.01         0.99         1.97 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 
        1.68         2.37         0.99         2.07         1.74         1.68 
TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 
        1.87         2.01         1.12        65.92        64.08        62.43 
TCGA-HI-7171 TCGA-J4-8198 
       66.02         3.22 

  AMP PEAK 16(XQ25) MUTATED AMP PEAK 16(XQ25) WILD-TYPE 
                        2.3                         0.3 
  AMP PEAK 16(XQ25) MUTATED AMP PEAK 16(XQ25) WILD-TYPE 
                      46.13                       66.02 
  AMP PEAK 16(XQ25) MUTATED AMP PEAK 16(XQ25) WILD-TYPE 
                     18.065                      16.290 
[1] "2.3 - 46.1 (18.1)" "0.3 - 66.0 (16.3)"
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
  "AMP PEAK 16(XQ25) MUTATED" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 16(XQ25) WILD-TYPE"   "AMP PEAK 16(XQ25) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
  "AMP PEAK 16(XQ25) MUTATED" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 16(XQ25) WILD-TYPE"   "AMP PEAK 16(XQ25) MUTATED" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 16(XQ25) WILD-TYPE"   "AMP PEAK 16(XQ25) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 16(XQ25) MUTATED" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7749 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
  "AMP PEAK 16(XQ25) MUTATED" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 16(XQ25) WILD-TYPE"   "AMP PEAK 16(XQ25) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
  "AMP PEAK 16(XQ25) MUTATED" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 16(XQ25) WILD-TYPE"   "AMP PEAK 16(XQ25) MUTATED" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 16(XQ25) WILD-TYPE"   "AMP PEAK 16(XQ25) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 16(XQ25) MUTATED" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7749 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
  "AMP PEAK 16(XQ25) MUTATED" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 16(XQ25) WILD-TYPE"   "AMP PEAK 16(XQ25) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
  "AMP PEAK 16(XQ25) MUTATED" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 16(XQ25) WILD-TYPE"   "AMP PEAK 16(XQ25) MUTATED" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 16(XQ25) WILD-TYPE"   "AMP PEAK 16(XQ25) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 16(XQ25) MUTATED" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7749 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 16(XQ25) WILD-TYPE" "AMP PEAK 16(XQ25) WILD-TYPE" 
[1] "hr=" "1"  
D15V2, continuous
D15V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 16(XQ25) MUTATED      0    6
  AMP PEAK 16(XQ25) WILD-TYPE    5  135
     clus
vv    AMP PEAK 16(XQ25) MUTATED AMP PEAK 16(XQ25) WILD-TYPE
  NO                          0                           5
  YES                         6                         135

Clustering(16) Variable = Amp Peak 17(Xq27.1) mutation analysis
D16V1, survival
                               sevent
clus2                             0   1
  AMP PEAK 17(XQ27.1) MUTATED     9   0
  AMP PEAK 17(XQ27.1) WILD-TYPE 136   1
  AMP PEAK 17(XQ27.1) MUTATED AMP PEAK 17(XQ27.1) WILD-TYPE 
                            9                           137 
  AMP PEAK 17(XQ27.1) MUTATED AMP PEAK 17(XQ27.1) WILD-TYPE 
                            0                             1 
$`AMP PEAK 17(XQ27.1) MUTATED`
TCGA-EJ-7331 TCGA-EJ-7783 TCGA-EJ-7789 TCGA-EJ-7792 TCGA-EJ-7794 TCGA-G9-6499 
        0.30         4.31         2.30        17.29         9.34        36.46 
TCGA-H9-7775 TCGA-HC-7744 TCGA-HC-7749 
        1.02         1.68         2.01 

$`AMP PEAK 17(XQ27.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.49        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       11.70         5.98        29.82        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 
       25.71        23.80        34.88        25.74        27.91        39.29 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       37.91        27.68        46.13        27.42        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
       13.05        41.82        23.80        29.92        17.06        26.99 
TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 
       48.99        61.15         9.70         9.50         9.37         7.66 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7784 
        5.75         5.59         6.28         5.56         2.10         5.49 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7793 TCGA-EJ-7797 
        8.48         2.60         1.71         7.13         1.41         6.15 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 
       33.14        27.02        32.65        27.65        26.43         3.32 
TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 
       28.77        27.98        26.50        27.81        16.60        17.03 
TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 
       21.83        12.82        11.70        47.41        33.34        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-HC-7077 
       15.02        15.98        14.83        10.65        16.83        65.98 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 
        5.33         2.93         2.01         0.99         1.97         1.68 
TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7747 TCGA-HC-7750 
        2.37         0.99         2.07         1.74         1.87         1.12 
TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       65.92        64.08        62.43        66.02         3.22 

  AMP PEAK 17(XQ27.1) MUTATED AMP PEAK 17(XQ27.1) WILD-TYPE 
                         0.30                          0.92 
  AMP PEAK 17(XQ27.1) MUTATED AMP PEAK 17(XQ27.1) WILD-TYPE 
                        36.46                         66.02 
  AMP PEAK 17(XQ27.1) MUTATED AMP PEAK 17(XQ27.1) WILD-TYPE 
                         2.30                         17.06 
[1] "0.3 - 36.5 (2.3)"  "0.9 - 66.0 (17.1)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
  "AMP PEAK 17(XQ27.1) MUTATED" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 17(XQ27.1) MUTATED" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
  "AMP PEAK 17(XQ27.1) MUTATED" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 17(XQ27.1) MUTATED" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
  "AMP PEAK 17(XQ27.1) MUTATED" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 17(XQ27.1) MUTATED" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"AMP PEAK 17(XQ27.1) WILD-TYPE"   "AMP PEAK 17(XQ27.1) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 17(XQ27.1) WILD-TYPE" "AMP PEAK 17(XQ27.1) WILD-TYPE" 
[1] "hr=" "1"  
D16V2, continuous
D16V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 17(XQ27.1) MUTATED      0    9
  AMP PEAK 17(XQ27.1) WILD-TYPE    5  132
     clus
vv    AMP PEAK 17(XQ27.1) MUTATED AMP PEAK 17(XQ27.1) WILD-TYPE
  NO                            0                             5
  YES                           9                           132

Clustering(17) Variable = Del Peak  1(1p31.3) mutation analysis
D17V1, survival
                               sevent
clus2                             0   1
  DEL PEAK  1(1P31.3) MUTATED    18   1
  DEL PEAK  1(1P31.3) WILD-TYPE 127   0
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                           19                           127 
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                            1                             0 
$`DEL PEAK  1(1P31.3) MUTATED`
TCGA-CH-5740 TCGA-CH-5753 TCGA-CH-5769 TCGA-CH-5791 TCGA-CH-5794 TCGA-EJ-5499 
        1.02         1.02         2.04        33.01        28.96        17.49 
TCGA-EJ-5504 TCGA-EJ-7788 TCGA-G9-6332 TCGA-G9-6342 TCGA-G9-6351 TCGA-G9-6361 
        7.53         1.71        65.92        43.99        39.95        33.14 
TCGA-G9-6499 TCGA-G9-7525 TCGA-HC-7078 TCGA-HC-7213 TCGA-HC-7231 TCGA-HI-7168 
       36.46        16.83         5.33         1.97         2.37        65.92 
TCGA-HI-7171 
       66.02 

$`DEL PEAK  1(1P31.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5744 
        2.99         6.97        22.06        12.99        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 TCGA-CH-5754 
       24.03         1.02        12.99        35.01        30.97         2.04 
TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 
        0.92        44.02        12.00         1.02        23.01         1.02 
TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 
       15.06        24.03        12.99        15.95        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5792 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 
       32.02         2.99        12.43        19.89        19.53        13.02 
TCGA-EJ-5498 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 
       17.62        23.97         8.02        17.42        14.70        11.70 
TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 
        5.98        29.82        36.03        24.23        25.91        25.71 
TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 
       23.80        34.88        25.74        27.91        39.29        37.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 
       27.68        46.13        27.42        25.97        18.64        13.05 
TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 
       41.82        23.80        29.92        17.06        26.99        48.99 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 
       61.15         9.70         9.50         9.37         7.66         5.75 
TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 
        5.59         6.28         0.30         5.56         2.10         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 
        5.49         8.48         2.60         2.30         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6333 
        1.41         9.34         6.15         1.05        30.35        63.29 
TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6353 TCGA-G9-6356 
       54.87        54.21        18.21        37.61        27.85        32.88 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       27.02        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       27.98        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 
       12.82        11.70        47.41        33.34        22.16        15.02 
TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7079 
       15.98        14.83        10.65         1.02        65.98         2.93 
TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        2.01         0.99         1.68         0.99         2.07         1.74 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7169 TCGA-HI-7170 
        1.68         1.87         2.01         1.12        64.08        62.43 
TCGA-J4-8198 
        3.22 

  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                         1.02                          0.30 
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                        66.02                         65.98 
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                        17.49                         15.98 
[1] "1.0 - 66.0 (17.5)" "0.3 - 66.0 (16.0)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
[1] "hr=" "1"  
D17V2, continuous
D17V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  1(1P31.3) MUTATED      0   19
  DEL PEAK  1(1P31.3) WILD-TYPE    5  122
     clus
vv    DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE
  NO                            0                             5
  YES                          19                           122

Clustering(18) Variable = Del Peak  2(1p21.3) mutation analysis
D18V1, survival
                               sevent
clus2                             0   1
  DEL PEAK  2(1P21.3) MUTATED    13   0
  DEL PEAK  2(1P21.3) WILD-TYPE 132   1
  DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE 
                           13                           133 
  DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE 
                            0                             1 
$`DEL PEAK  2(1P21.3) MUTATED`
TCGA-CH-5753 TCGA-CH-5788 TCGA-CH-5791 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-G9-6332 
        1.02        26.96        33.01         1.71         2.30        65.92 
TCGA-G9-6338 TCGA-G9-6351 TCGA-G9-6369 TCGA-HC-7078 TCGA-HC-7213 TCGA-HC-7736 
       54.21        39.95        27.98         5.33         1.97         0.99 
TCGA-HC-7747 
        1.87 

$`DEL PEAK  2(1P21.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 
        2.04         0.92        44.02        12.00         1.02        23.01 
TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
        1.02        15.06        24.03         2.04        12.99        15.95 
TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 
        9.96        32.02         2.99        28.96        12.43        19.89 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 
       17.42         7.53        14.70        11.70         5.98        29.82 
TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 
       36.03        24.23        25.91        25.71        23.80        34.88 
TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 
       25.74        27.91        39.29        37.91        27.68        46.13 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 
       27.42        25.97        18.64        13.05        41.82        23.80 
TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       29.92        17.06        26.99        48.99        61.15         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        2.60         7.13        17.29         1.41         9.34         6.15 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6342 TCGA-G9-6343 
        1.05        30.35        63.29        54.87        43.99        18.21 
TCGA-G9-6348 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 
       37.61        27.85        32.88        33.14        27.02        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6370 TCGA-G9-6371 
       27.65        26.43         3.32        28.77        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 
       33.34        36.46        22.16        15.02        15.98        14.83 
TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7079 TCGA-HC-7080 
       10.65        16.83         1.02        65.98         2.93         2.01 
TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 
        0.99         1.68         2.37         2.07         1.74         1.68 
TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        2.01         1.12        65.92        64.08        62.43        66.02 
TCGA-J4-8198 
        3.22 

  DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE 
                         0.99                          0.30 
  DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE 
                        65.92                         66.02 
  DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE 
                         5.33                         16.83 
[1] "1.0 - 65.9 (5.3)"  "0.3 - 66.0 (16.8)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  2(1P21.3) WILD-TYPE"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK  2(1P21.3) MUTATED"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  2(1P21.3) WILD-TYPE"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  2(1P21.3) WILD-TYPE"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  2(1P21.3) WILD-TYPE"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  2(1P21.3) WILD-TYPE"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK  2(1P21.3) MUTATED"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  2(1P21.3) WILD-TYPE"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  2(1P21.3) WILD-TYPE"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  2(1P21.3) WILD-TYPE"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  2(1P21.3) WILD-TYPE"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK  2(1P21.3) MUTATED"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  2(1P21.3) WILD-TYPE"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  2(1P21.3) WILD-TYPE"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  2(1P21.3) WILD-TYPE"   "DEL PEAK  2(1P21.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
  "DEL PEAK  2(1P21.3) MUTATED" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  2(1P21.3) WILD-TYPE" "DEL PEAK  2(1P21.3) WILD-TYPE" 
[1] "hr=" "1"  
D18V2, continuous
D18V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  2(1P21.3) MUTATED      0   13
  DEL PEAK  2(1P21.3) WILD-TYPE    5  128
     clus
vv    DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE
  NO                            0                             5
  YES                          13                           128

Clustering(19) Variable = Del Peak  3(1q23.1) mutation analysis
D19V1, survival
                               sevent
clus2                             0   1
  DEL PEAK  3(1Q23.1) MUTATED     5   0
  DEL PEAK  3(1Q23.1) WILD-TYPE 140   1
  DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE 
                            5                           141 
  DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE 
                            0                             1 
$`DEL PEAK  3(1Q23.1) MUTATED`
TCGA-EJ-5525 TCGA-EJ-7115 TCGA-EJ-7315 TCGA-HC-7080 TCGA-HC-7744 
       25.97        26.99         9.50         2.01         1.68 

$`DEL PEAK  3(1Q23.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.49        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       11.70         5.98        29.82        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 
       25.71        23.80        34.88        25.74        27.91        39.29 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5526 TCGA-EJ-5527 
       37.91        27.68        46.13        27.42        18.64        13.05 
TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7123 TCGA-EJ-7125 
       41.82        23.80        29.92        17.06        48.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.70         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        2.60         1.71         2.30         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 
        9.34         6.15         1.05        30.35        65.92        63.29 
TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       54.87        54.21        43.99        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 
       33.34        36.46        22.16        15.02        15.98        14.83 
TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 
       10.65        16.83         1.02        65.98         5.33         2.93 
TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 
        0.99         1.97         1.68         2.37         0.99         2.07 
TCGA-HC-7740 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 
        1.74         1.87         2.01         1.12        65.92        64.08 
TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       62.43        66.02         3.22 

  DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE 
                         1.68                          0.30 
  DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE 
                        26.99                         66.02 
  DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE 
                         9.50                         16.83 
[1] "1.7 - 27.0 (9.5)"  "0.3 - 66.0 (16.8)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK  3(1Q23.1) MUTATED" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  3(1Q23.1) WILD-TYPE"   "DEL PEAK  3(1Q23.1) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  3(1Q23.1) WILD-TYPE"   "DEL PEAK  3(1Q23.1) MUTATED" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  3(1Q23.1) WILD-TYPE"   "DEL PEAK  3(1Q23.1) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  3(1Q23.1) WILD-TYPE"   "DEL PEAK  3(1Q23.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK  3(1Q23.1) MUTATED" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  3(1Q23.1) WILD-TYPE"   "DEL PEAK  3(1Q23.1) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  3(1Q23.1) WILD-TYPE"   "DEL PEAK  3(1Q23.1) MUTATED" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  3(1Q23.1) WILD-TYPE"   "DEL PEAK  3(1Q23.1) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  3(1Q23.1) WILD-TYPE"   "DEL PEAK  3(1Q23.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK  3(1Q23.1) MUTATED" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  3(1Q23.1) WILD-TYPE"   "DEL PEAK  3(1Q23.1) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  3(1Q23.1) WILD-TYPE"   "DEL PEAK  3(1Q23.1) MUTATED" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  3(1Q23.1) WILD-TYPE"   "DEL PEAK  3(1Q23.1) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  3(1Q23.1) WILD-TYPE"   "DEL PEAK  3(1Q23.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  3(1Q23.1) WILD-TYPE" "DEL PEAK  3(1Q23.1) WILD-TYPE" 
[1] "hr=" "1"  
D19V2, continuous
D19V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  3(1Q23.1) MUTATED      0    5
  DEL PEAK  3(1Q23.1) WILD-TYPE    5  136
     clus
vv    DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE
  NO                            0                             5
  YES                           5                           136

Clustering(20) Variable = Del Peak  4(1q42.13) mutation analysis
D20V1, survival
                                sevent
clus2                              0   1
  DEL PEAK  4(1Q42.13) MUTATED    13   1
  DEL PEAK  4(1Q42.13) WILD-TYPE 132   0
  DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE 
                            14                            132 
  DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE 
                             1                              0 
$`DEL PEAK  4(1Q42.13) MUTATED`
TCGA-CH-5737 TCGA-CH-5764 TCGA-CH-5771 TCGA-EJ-5496 TCGA-EJ-5514 TCGA-EJ-5518 
        2.99         1.02        12.99        19.53        23.80        39.29 
TCGA-EJ-5519 TCGA-EJ-7123 TCGA-EJ-7330 TCGA-G9-6332 TCGA-G9-6499 TCGA-HC-7736 
       37.91        48.99         6.28        65.92        36.46         0.99 
TCGA-HC-7737 TCGA-HI-7171 
        2.07        66.02 

$`DEL PEAK  4(1Q42.13) WILD-TYPE`
TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5744 
        6.97        22.06         1.02        12.99        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 TCGA-CH-5753 
       24.03         1.02        12.99        35.01        30.97         1.02 
TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5765 TCGA-CH-5766 
        2.04         0.92        44.02        12.00        23.01         1.02 
TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 
       15.06        24.03         2.04        15.95        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 
       32.02        33.01         2.99        28.96        12.43        19.89 
TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 
       13.02        17.62        17.49        23.97         8.02        17.42 
TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 
        7.53        14.70        11.70         5.98        29.82        36.03 
TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 
       24.23        25.91        25.71        34.88        25.74        27.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 
       27.68        46.13        27.42        25.97        18.64        13.05 
TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7125 
       41.82        23.80        29.92        17.06        26.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
        9.70         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        2.60         1.71         2.30         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6333 TCGA-G9-6336 
        9.34         6.15         1.05        30.35        63.29        54.87 
TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 
       54.21        43.99        18.21        37.61        39.95        27.85 
TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 
       32.88        33.14        27.02        32.65        27.65        26.43 
TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 
        3.32        28.77        27.98        26.50        27.81        16.60 
TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 
       17.03        21.83        12.82        11.70        47.41        33.34 
TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 
       22.16        15.02        15.98        14.83        10.65        16.83 
TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 
        1.02        65.98         5.33         2.93         2.01         0.99 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 
        1.97         1.68         2.37         1.74         1.68         1.87 
TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-J4-8198 
        2.01         1.12        65.92        64.08        62.43         3.22 

  DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE 
                          0.99                           0.30 
  DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE 
                         66.02                          65.98 
  DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE 
                        21.665                         16.290 
[1] "1.0 - 66.0 (21.7)" "0.3 - 66.0 (16.3)"
                    TCGA-CH-5737                     TCGA-CH-5738 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK  4(1Q42.13) MUTATED"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK  4(1Q42.13) MUTATED"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK  4(1Q42.13) WILD-TYPE"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK  4(1Q42.13) MUTATED"   "DEL PEAK  4(1Q42.13) MUTATED" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK  4(1Q42.13) WILD-TYPE" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK  4(1Q42.13) MUTATED" "DEL PEAK  4(1Q42.13) WILD-TYPE" 
[1] "hr=" "1"  
D20V2, continuous
D20V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  4(1Q42.13) MUTATED      0   14
  DEL PEAK  4(1Q42.13) WILD-TYPE    5  127
     clus
vv    DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE
  NO                             0                              5
  YES                           14                            127

Clustering(21) Variable = Del Peak  5(2q22.1) mutation analysis
D21V1, survival
                               sevent
clus2                             0   1
  DEL PEAK  5(2Q22.1) MUTATED    18   1
  DEL PEAK  5(2Q22.1) WILD-TYPE 127   0
  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                           19                           127 
  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                            1                             0 
$`DEL PEAK  5(2Q22.1) MUTATED`
TCGA-CH-5767 TCGA-CH-5788 TCGA-EJ-5504 TCGA-EJ-5518 TCGA-EJ-7123 TCGA-EJ-7330 
       15.06        26.96         7.53        39.29        48.99         6.28 
TCGA-EJ-7782 TCGA-EJ-7784 TCGA-EJ-7789 TCGA-G9-6369 TCGA-G9-6499 TCGA-G9-7510 
        2.10         5.49         2.30        27.98        36.46        22.16 
TCGA-G9-7525 TCGA-HC-7080 TCGA-HC-7213 TCGA-HC-7736 TCGA-HC-7744 TCGA-HC-7749 
       16.83         2.01         1.97         0.99         1.68         2.01 
TCGA-HI-7171 
       66.02 

$`DEL PEAK  5(2Q22.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
       23.01         1.02        24.03         2.04        12.99        15.95 
TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 
        9.96        32.02        33.01         2.99        28.96        12.43 
TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 
       19.89        19.53        13.02        17.62        17.49        23.97 
TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 
        8.02        17.42        14.70        11.70         5.98        29.82 
TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 
       36.03        24.23        25.91        25.71        23.80        34.88 
TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 
       25.74        27.91        37.91        27.68        46.13        27.42 
TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 
       25.97        18.64        13.05        41.82        23.80        29.92 
TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 
       17.06        26.99        61.15         9.70         9.50         9.37 
TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7783 
        7.66         5.75         5.59         0.30         5.56         4.31 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        8.48         2.60         1.71         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 
        9.34         6.15         1.05        30.35        65.92        63.29 
TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       54.87        54.21        43.99        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 
       26.43         3.32        28.77        26.50        27.81        16.60 
TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 
       17.03        21.83        12.82        11.70        47.41        33.34 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-H9-7775 TCGA-HC-7077 
       15.02        15.98        14.83        10.65         1.02        65.98 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7737 
        5.33         2.93         0.99         1.68         2.37         2.07 
TCGA-HC-7740 TCGA-HC-7747 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 
        1.74         1.87         1.12        65.92        64.08        62.43 
TCGA-J4-8198 
        3.22 

  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                         0.99                          0.30 
  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                        66.02                         65.98 
  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                         7.53                         17.06 
[1] "1.0 - 66.0 (7.5)"  "0.3 - 66.0 (17.1)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  5(2Q22.1) MUTATED"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  5(2Q22.1) MUTATED"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  5(2Q22.1) MUTATED"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  5(2Q22.1) WILD-TYPE"   "DEL PEAK  5(2Q22.1) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  5(2Q22.1) WILD-TYPE" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  5(2Q22.1) MUTATED" "DEL PEAK  5(2Q22.1) WILD-TYPE" 
[1] "hr=" "1"  
D21V2, continuous
D21V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  5(2Q22.1) MUTATED      0   19
  DEL PEAK  5(2Q22.1) WILD-TYPE    5  122
     clus
vv    DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  NO                            0                             5
  YES                          19                           122

Clustering(22) Variable = Del Peak  6(2q22.3) mutation analysis
D22V1, survival
                               sevent
clus2                             0   1
  DEL PEAK  6(2Q22.3) MUTATED    17   1
  DEL PEAK  6(2Q22.3) WILD-TYPE 128   0
  DEL PEAK  6(2Q22.3) MUTATED DEL PEAK  6(2Q22.3) WILD-TYPE 
                           18                           128 
  DEL PEAK  6(2Q22.3) MUTATED DEL PEAK  6(2Q22.3) WILD-TYPE 
                            1                             0 
$`DEL PEAK  6(2Q22.3) MUTATED`
TCGA-CH-5788 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5514 TCGA-EJ-5518 TCGA-EJ-7123 
       26.96         5.98        36.03        23.80        39.29        48.99 
TCGA-EJ-7784 TCGA-EJ-7789 TCGA-G9-6333 TCGA-G9-6496 TCGA-G9-6499 TCGA-HC-7078 
        5.49         2.30        63.29        33.34        36.46         5.33 
TCGA-HC-7080 TCGA-HC-7213 TCGA-HC-7231 TCGA-HC-7744 TCGA-HC-7749 TCGA-HI-7171 
        2.01         1.97         2.37         1.68         2.01        66.02 

$`DEL PEAK  6(2Q22.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 
       15.95         9.96        32.02        33.01         2.99        28.96 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 
       12.43        19.89        19.53        13.02        17.62        17.49 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       23.97         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5508 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 
       29.82        24.23        25.91        25.71        34.88        25.74 
TCGA-EJ-5517 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 
       27.91        37.91        27.68        46.13        27.42        25.97 
TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 
       18.64        13.05        41.82        23.80        29.92        17.06 
TCGA-EJ-7115 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 
       26.99        61.15         9.70         9.50         9.37         7.66 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 
        5.75         5.59         6.28         0.30         5.56         2.10 
TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 
        4.31         8.48         2.60         1.71         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
        1.41         9.34         6.15         1.05        30.35        65.92 
TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       54.87        54.21        43.99        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 
       22.16        15.02        15.98        14.83        10.65        16.83 
TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7079 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7736 
        1.02        65.98         2.93         0.99         1.68         0.99 
TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7747 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 
        2.07         1.74         1.87         1.12        65.92        64.08 
TCGA-HI-7170 TCGA-J4-8198 
       62.43         3.22 

  DEL PEAK  6(2Q22.3) MUTATED DEL PEAK  6(2Q22.3) WILD-TYPE 
                         1.68                          0.30 
  DEL PEAK  6(2Q22.3) MUTATED DEL PEAK  6(2Q22.3) WILD-TYPE 
                        66.02                         65.98 
  DEL PEAK  6(2Q22.3) MUTATED DEL PEAK  6(2Q22.3) WILD-TYPE 
                       14.890                        16.715 
[1] "1.7 - 66.0 (14.9)" "0.3 - 66.0 (16.7)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  6(2Q22.3) MUTATED" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
  "DEL PEAK  6(2Q22.3) MUTATED" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  6(2Q22.3) MUTATED" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  6(2Q22.3) MUTATED" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  6(2Q22.3) MUTATED" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
  "DEL PEAK  6(2Q22.3) MUTATED" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  6(2Q22.3) MUTATED" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  6(2Q22.3) MUTATED" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  6(2Q22.3) MUTATED" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
  "DEL PEAK  6(2Q22.3) MUTATED" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  6(2Q22.3) MUTATED" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  6(2Q22.3) WILD-TYPE"   "DEL PEAK  6(2Q22.3) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  6(2Q22.3) WILD-TYPE" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  6(2Q22.3) MUTATED" "DEL PEAK  6(2Q22.3) WILD-TYPE" 
[1] "hr=" "1"  
D22V2, continuous
D22V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  6(2Q22.3) MUTATED      0   18
  DEL PEAK  6(2Q22.3) WILD-TYPE    5  123
     clus
vv    DEL PEAK  6(2Q22.3) MUTATED DEL PEAK  6(2Q22.3) WILD-TYPE
  NO                            0                             5
  YES                          18                           123

Clustering(23) Variable = Del Peak  7(3p13) mutation analysis
D23V1, survival
                             sevent
clus2                           0   1
  DEL PEAK  7(3P13) MUTATED    26   0
  DEL PEAK  7(3P13) WILD-TYPE 119   1
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                         26                         120 
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                          0                           1 
$`DEL PEAK  7(3P13) MUTATED`
TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5741 TCGA-CH-5746 TCGA-CH-5752 TCGA-CH-5753 
        6.97        22.06        12.99        24.03        30.97         1.02 
TCGA-CH-5764 TCGA-EJ-5497 TCGA-EJ-5501 TCGA-EJ-5505 TCGA-EJ-5510 TCGA-EJ-5517 
        1.02        13.02        23.97        14.70        24.23        27.91 
TCGA-EJ-5542 TCGA-EJ-7327 TCGA-EJ-7788 TCGA-EJ-7797 TCGA-G9-6332 TCGA-G9-6362 
       17.06         5.75         1.71         6.15        65.92        27.02 
TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6384 TCGA-G9-7523 TCGA-HC-7077 TCGA-HC-7747 
       32.65        27.65        12.82        10.65        65.98         1.87 
TCGA-HC-7749 TCGA-HI-7168 
        2.01        65.92 

$`DEL PEAK  7(3P13) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5740 TCGA-CH-5743 TCGA-CH-5744 TCGA-CH-5748 TCGA-CH-5750 
        2.99         1.02        13.94         1.97         1.02        12.99 
TCGA-CH-5751 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5765 
       35.01         2.04         0.92        44.02        12.00        23.01 
TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
        1.02        15.06        24.03         2.04        12.99        15.95 
TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 
       26.96         9.96        32.02        33.01         2.99        28.96 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5502 
       12.43        19.89        19.53        17.62        17.49         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 
       17.42         7.53        11.70         5.98        29.82        36.03 
TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5518 
       25.91        25.71        23.80        34.88        25.74        39.29 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       37.91        27.68        46.13        27.42        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 
       13.05        41.82        23.80        29.92        26.99        48.99 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7328 
       61.15         9.70         9.50         9.37         7.66         5.59 
TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 
        6.28         0.30         5.56         2.10         4.31         5.49 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        8.48         2.60         2.30         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        9.34         1.05        30.35        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       33.14        26.43         3.32        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6385 TCGA-G9-6494 
       27.81        16.60        17.03        21.83        11.70        47.41 
TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 
       33.34        36.46        22.16        15.02        15.98        14.83 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 
       16.83         1.02         5.33         2.93         2.01         0.99 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        1.97         1.68         2.37         0.99         2.07         1.74 
TCGA-HC-7744 TCGA-HC-7750 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
        1.68         1.12        64.08        62.43        66.02         3.22 

  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                       1.02                        0.30 
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                      65.98                       66.02 
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                     15.880                      16.715 
[1] "1.0 - 66.0 (15.9)" "0.3 - 66.0 (16.7)"
                 TCGA-CH-5737                  TCGA-CH-5738 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-CH-5739                  TCGA-CH-5740 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-CH-5753                  TCGA-CH-5754 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
  "DEL PEAK  7(3P13) MUTATED"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-G9-6364                  TCGA-G9-6365 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7749 
  "DEL PEAK  7(3P13) MUTATED"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-CH-5739                  TCGA-CH-5740 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-CH-5753                  TCGA-CH-5754 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
  "DEL PEAK  7(3P13) MUTATED"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-G9-6364                  TCGA-G9-6365 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7749 
  "DEL PEAK  7(3P13) MUTATED"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-CH-5739                  TCGA-CH-5740 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-CH-5753                  TCGA-CH-5754 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
  "DEL PEAK  7(3P13) MUTATED"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-G9-6364                  TCGA-G9-6365 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
  "DEL PEAK  7(3P13) MUTATED" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7749 
  "DEL PEAK  7(3P13) MUTATED"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"DEL PEAK  7(3P13) WILD-TYPE"   "DEL PEAK  7(3P13) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  7(3P13) WILD-TYPE" "DEL PEAK  7(3P13) WILD-TYPE" 
[1] "hr=" "1"  
D23V2, continuous
D23V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  7(3P13) MUTATED      3   23
  DEL PEAK  7(3P13) WILD-TYPE    2  118
     clus
vv    DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  NO                          3                           2
  YES                        23                         118

Clustering(24) Variable = Del Peak  8(3q29) mutation analysis
D24V1, survival
                             sevent
clus2                           0   1
  DEL PEAK  8(3Q29) MUTATED     9   0
  DEL PEAK  8(3Q29) WILD-TYPE 136   1
  DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE 
                          9                         137 
  DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE 
                          0                           1 
$`DEL PEAK  8(3Q29) MUTATED`
TCGA-CH-5768 TCGA-EJ-5497 TCGA-EJ-5542 TCGA-EJ-7792 TCGA-G9-6332 TCGA-G9-6361 
       24.03        13.02        17.06        17.29        65.92        33.14 
TCGA-G9-7523 TCGA-G9-7525 TCGA-HI-7168 
       10.65        16.83        65.92 

$`DEL PEAK  8(3Q29) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
       23.01         1.02        15.06         2.04        12.99        15.95 
TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 
       26.96         9.96        32.02        33.01         2.99        28.96 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 
       12.43        19.89        19.53        17.62        17.49        23.97 
TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 
        8.02        17.42         7.53        14.70        11.70         5.98 
TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 
       29.82        36.03        24.23        25.91        25.71        23.80 
TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 
       34.88        25.74        27.91        39.29        37.91        27.68 
TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 
       46.13        27.42        25.97        18.64        13.05        41.82 
TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       23.80        29.92        26.99        48.99        61.15         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7793 TCGA-EJ-7794 
        2.60         1.71         2.30         7.13         1.41         9.34 
TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        6.15         1.05        30.35        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       27.02        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       27.98        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 
       12.82        11.70        47.41        33.34        36.46        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 
       15.02        15.98        14.83         1.02        65.98         5.33 
TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 
        2.93         2.01         0.99         1.97         1.68         2.37 
TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 
        0.99         2.07         1.74         1.68         1.87         2.01 
TCGA-HC-7750 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
        1.12        64.08        62.43        66.02         3.22 

  DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE 
                      10.65                        0.30 
  DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE 
                      65.92                       66.02 
  DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE 
                      17.29                       15.95 
[1] "10.7 - 65.9 (17.3)" "0.3 - 66.0 (15.9)" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
  "DEL PEAK  8(3Q29) MUTATED" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "DEL PEAK  8(3Q29) MUTATED" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
  "DEL PEAK  8(3Q29) MUTATED" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7749 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
  "DEL PEAK  8(3Q29) MUTATED" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "DEL PEAK  8(3Q29) MUTATED" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
  "DEL PEAK  8(3Q29) MUTATED" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7749 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
  "DEL PEAK  8(3Q29) MUTATED" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "DEL PEAK  8(3Q29) MUTATED" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
  "DEL PEAK  8(3Q29) MUTATED" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7749 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"DEL PEAK  8(3Q29) WILD-TYPE"   "DEL PEAK  8(3Q29) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  8(3Q29) WILD-TYPE" "DEL PEAK  8(3Q29) WILD-TYPE" 
[1] "hr=" "1"  
D24V2, continuous
D24V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  8(3Q29) MUTATED      0    9
  DEL PEAK  8(3Q29) WILD-TYPE    5  132
     clus
vv    DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  NO                          0                           5
  YES                         9                         132

Clustering(25) Variable = Del Peak  9(4q28.1) mutation analysis
D25V1, survival
                               sevent
clus2                             0   1
  DEL PEAK  9(4Q28.1) MUTATED    11   0
  DEL PEAK  9(4Q28.1) WILD-TYPE 134   1
  DEL PEAK  9(4Q28.1) MUTATED DEL PEAK  9(4Q28.1) WILD-TYPE 
                           11                           135 
  DEL PEAK  9(4Q28.1) MUTATED DEL PEAK  9(4Q28.1) WILD-TYPE 
                            0                             1 
$`DEL PEAK  9(4Q28.1) MUTATED`
TCGA-CH-5751 TCGA-EJ-5509 TCGA-EJ-5521 TCGA-EJ-7123 TCGA-EJ-7330 TCGA-EJ-7331 
       35.01        36.03        27.68        48.99         6.28         0.30 
TCGA-EJ-7782 TCGA-EJ-7789 TCGA-G9-6361 TCGA-G9-6499 TCGA-HC-7749 
        2.10         2.30        33.14        36.46         2.01 

$`DEL PEAK  9(4Q28.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 
        2.04         0.92        44.02        12.00         1.02        23.01 
TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
        1.02        15.06        24.03         2.04        12.99        15.95 
TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 
       26.96         9.96        32.02        33.01         2.99        28.96 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 
       12.43        19.89        19.53        13.02        17.62        17.49 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       23.97         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 
        5.98        29.82        24.23        25.91        25.71        23.80 
TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5522 
       34.88        25.74        27.91        39.29        37.91        46.13 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 
       27.42        25.97        18.64        13.05        41.82        23.80 
TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 
       29.92        17.06        26.99        61.15         9.70         9.50 
TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7781 TCGA-EJ-7783 
        9.37         7.66         5.75         5.59         5.56         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 
        5.49         8.48         2.60         1.71         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
        1.41         9.34         6.15         1.05        30.35        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 
       63.29        54.87        54.21        43.99        18.21        37.61 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       39.95        27.85        32.88        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 
       33.34        22.16        15.02        15.98        14.83        10.65 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 
       16.83         1.02        65.98         5.33         2.93         2.01 
TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 
        0.99         1.97         1.68         2.37         0.99         2.07 
TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 
        1.74         1.68         1.87         1.12        65.92        64.08 
TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       62.43        66.02         3.22 

  DEL PEAK  9(4Q28.1) MUTATED DEL PEAK  9(4Q28.1) WILD-TYPE 
                         0.30                          0.92 
  DEL PEAK  9(4Q28.1) MUTATED DEL PEAK  9(4Q28.1) WILD-TYPE 
                        48.99                         66.02 
  DEL PEAK  9(4Q28.1) MUTATED DEL PEAK  9(4Q28.1) WILD-TYPE 
                        27.68                         16.60 
[1] "0.3 - 49.0 (27.7)" "0.9 - 66.0 (16.6)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK  9(4Q28.1) MUTATED" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  9(4Q28.1) MUTATED" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  9(4Q28.1) MUTATED"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  9(4Q28.1) MUTATED" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK  9(4Q28.1) MUTATED" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  9(4Q28.1) MUTATED" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  9(4Q28.1) MUTATED"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  9(4Q28.1) MUTATED" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK  9(4Q28.1) MUTATED" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  9(4Q28.1) MUTATED" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  9(4Q28.1) MUTATED"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  9(4Q28.1) MUTATED" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK  9(4Q28.1) WILD-TYPE"   "DEL PEAK  9(4Q28.1) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  9(4Q28.1) WILD-TYPE" "DEL PEAK  9(4Q28.1) WILD-TYPE" 
[1] "hr=" "1"  
D25V2, continuous
D25V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  9(4Q28.1) MUTATED      0   11
  DEL PEAK  9(4Q28.1) WILD-TYPE    5  130
     clus
vv    DEL PEAK  9(4Q28.1) MUTATED DEL PEAK  9(4Q28.1) WILD-TYPE
  NO                            0                             5
  YES                          11                           130

Clustering(26) Variable = Del Peak 10(5q11.2) mutation analysis
D26V1, survival
                               sevent
clus2                             0   1
  DEL PEAK 10(5Q11.2) MUTATED    23   0
  DEL PEAK 10(5Q11.2) WILD-TYPE 122   1
  DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE 
                           23                           123 
  DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE 
                            0                             1 
$`DEL PEAK 10(5Q11.2) MUTATED`
TCGA-CH-5751 TCGA-CH-5761 TCGA-CH-5766 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5792 
       35.01         0.92         1.02        24.03        12.99         2.99 
TCGA-EJ-5501 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5519 TCGA-EJ-5525 TCGA-EJ-5526 
       23.97         5.98        36.03        37.91        25.97        18.64 
TCGA-EJ-7115 TCGA-EJ-7327 TCGA-EJ-7789 TCGA-G9-6338 TCGA-G9-6499 TCGA-G9-7510 
       26.99         5.75         2.30        54.21        36.46        22.16 
TCGA-G9-7521 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HI-7168 
       15.98         1.02        65.98         5.33        65.92 

$`DEL PEAK 10(5Q11.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5767 
        2.04        44.02        12.00         1.02        23.01        15.06 
TCGA-CH-5769 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 
        2.04        15.95        26.96         9.96        32.02        33.01 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       17.49         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5508 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 
       29.82        24.23        25.91        25.71        23.80        34.88 
TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 
       25.74        27.91        39.29        27.68        46.13        27.42 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7123 
       13.05        41.82        23.80        29.92        17.06        48.99 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7328 
       61.15         9.70         9.50         9.37         7.66         5.59 
TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 
        6.28         0.30         5.56         2.10         4.31         5.49 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        8.48         2.60         1.71         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 
        9.34         6.15         1.05        30.35        65.92        63.29 
TCGA-G9-6336 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 
       54.87        43.99        18.21        37.61        39.95        27.85 
TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 
       32.88        33.14        27.02        32.65        27.65        26.43 
TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 
        3.32        28.77        27.98        26.50        27.81        16.60 
TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 
       17.03        21.83        12.82        11.70        47.41        33.34 
TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-HC-7079 TCGA-HC-7080 
       15.02        14.83        10.65        16.83         2.93         2.01 
TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 
        0.99         1.97         1.68         2.37         0.99         2.07 
TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7169 
        1.74         1.68         1.87         2.01         1.12        64.08 
TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       62.43        66.02         3.22 

  DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE 
                         0.92                          0.30 
  DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE 
                        65.98                         66.02 
  DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE 
                        22.16                         15.95 
[1] "0.9 - 66.0 (22.2)" "0.3 - 66.0 (15.9)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK 10(5Q11.2) MUTATED"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK 10(5Q11.2) MUTATED"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-HC-7077                    TCGA-HC-7078 
  "DEL PEAK 10(5Q11.2) MUTATED"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK 10(5Q11.2) MUTATED"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK 10(5Q11.2) MUTATED"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-HC-7077                    TCGA-HC-7078 
  "DEL PEAK 10(5Q11.2) MUTATED"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK 10(5Q11.2) MUTATED"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK 10(5Q11.2) MUTATED" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK 10(5Q11.2) MUTATED"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-HC-7077                    TCGA-HC-7078 
  "DEL PEAK 10(5Q11.2) MUTATED"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK 10(5Q11.2) WILD-TYPE"   "DEL PEAK 10(5Q11.2) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 10(5Q11.2) WILD-TYPE" "DEL PEAK 10(5Q11.2) WILD-TYPE" 
[1] "hr=" "1"  
D26V2, continuous
D26V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 10(5Q11.2) MUTATED      0   23
  DEL PEAK 10(5Q11.2) WILD-TYPE    5  118
     clus
vv    DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE
  NO                            0                             5
  YES                          23                           118

Clustering(27) Variable = Del Peak 11(5q21.1) mutation analysis
D27V1, survival
                               sevent
clus2                             0   1
  DEL PEAK 11(5Q21.1) MUTATED    26   0
  DEL PEAK 11(5Q21.1) WILD-TYPE 119   1
  DEL PEAK 11(5Q21.1) MUTATED DEL PEAK 11(5Q21.1) WILD-TYPE 
                           26                           120 
  DEL PEAK 11(5Q21.1) MUTATED DEL PEAK 11(5Q21.1) WILD-TYPE 
                            0                             1 
$`DEL PEAK 11(5Q21.1) MUTATED`
TCGA-CH-5737 TCGA-CH-5751 TCGA-CH-5761 TCGA-CH-5766 TCGA-CH-5788 TCGA-CH-5792 
        2.99        35.01         0.92         1.02        26.96         2.99 
TCGA-EJ-5501 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5521 
       23.97         7.53        14.70         5.98        36.03        27.68 
TCGA-EJ-5531 TCGA-EJ-7123 TCGA-EJ-7315 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 
       23.80        48.99         9.50         6.28         0.30         2.10 
TCGA-EJ-7784 TCGA-EJ-7789 TCGA-G9-6338 TCGA-G9-6369 TCGA-G9-6496 TCGA-G9-6499 
        5.49         2.30        54.21        27.98        33.34        36.46 
TCGA-HC-7080 TCGA-HI-7168 
        2.01        65.92 

$`DEL PEAK 11(5Q21.1) WILD-TYPE`
TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5744 
        6.97        22.06         1.02        12.99        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 TCGA-CH-5754 
       24.03         1.02        12.99        30.97         1.02         2.04 
TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5767 TCGA-CH-5768 
       44.02        12.00         1.02        23.01        15.06        24.03 
TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 
        2.04        12.99        15.95         9.96        32.02        33.01 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5510 
       17.49         8.02        17.42        11.70        29.82        24.23 
TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 
       25.91        25.71        23.80        34.88        25.74        27.91 
TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       39.29        37.91        46.13        27.42        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7125 
       13.05        41.82        29.92        17.06        26.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7781 
        9.70         9.37         7.66         5.75         5.59         5.56 
TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 
        4.31         8.48         2.60         1.71         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
        1.41         9.34         6.15         1.05        30.35        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       63.29        54.87        43.99        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 
       26.43         3.32        28.77        26.50        27.81        16.60 
TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-7510 
       17.03        21.83        12.82        11.70        47.41        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 
       15.02        15.98        14.83        10.65        16.83         1.02 
TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 
       65.98         5.33         2.93         0.99         1.97         1.68 
TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 
        2.37         0.99         2.07         1.74         1.68         1.87 
TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
        2.01         1.12        64.08        62.43        66.02         3.22 

  DEL PEAK 11(5Q21.1) MUTATED DEL PEAK 11(5Q21.1) WILD-TYPE 
                         0.30                          0.99 
  DEL PEAK 11(5Q21.1) MUTATED DEL PEAK 11(5Q21.1) WILD-TYPE 
                        65.92                         66.02 
  DEL PEAK 11(5Q21.1) MUTATED DEL PEAK 11(5Q21.1) WILD-TYPE 
                        12.10                         16.93 
[1] "0.3 - 65.9 (12.1)" "1.0 - 66.0 (16.9)"
                   TCGA-CH-5737                    TCGA-CH-5738 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK 11(5Q21.1) MUTATED"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK 11(5Q21.1) MUTATED"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK 11(5Q21.1) MUTATED"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK 11(5Q21.1) MUTATED"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK 11(5Q21.1) MUTATED"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK 11(5Q21.1) MUTATED"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK 11(5Q21.1) MUTATED" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK 11(5Q21.1) WILD-TYPE"   "DEL PEAK 11(5Q21.1) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 11(5Q21.1) WILD-TYPE" "DEL PEAK 11(5Q21.1) WILD-TYPE" 
[1] "hr=" "1"  
D27V2, continuous
D27V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 11(5Q21.1) MUTATED      0   26
  DEL PEAK 11(5Q21.1) WILD-TYPE    5  115
     clus
vv    DEL PEAK 11(5Q21.1) MUTATED DEL PEAK 11(5Q21.1) WILD-TYPE
  NO                            0                             5
  YES                          26                           115

Clustering(28) Variable = Del Peak 12(6q15) mutation analysis
D28V1, survival
                             sevent
clus2                          0  1
  DEL PEAK 12(6Q15) MUTATED   49  0
  DEL PEAK 12(6Q15) WILD-TYPE 96  1
  DEL PEAK 12(6Q15) MUTATED DEL PEAK 12(6Q15) WILD-TYPE 
                         49                          97 
  DEL PEAK 12(6Q15) MUTATED DEL PEAK 12(6Q15) WILD-TYPE 
                          0                           1 
$`DEL PEAK 12(6Q15) MUTATED`
TCGA-CH-5737 TCGA-CH-5740 TCGA-CH-5744 TCGA-CH-5748 TCGA-CH-5751 TCGA-CH-5753 
        2.99         1.02         1.97         1.02        35.01         1.02 
TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5788 TCGA-CH-5792 
        2.04         0.92         1.02        15.06        26.96         2.99 
TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5511 TCGA-EJ-5514 
        7.53        14.70         5.98        36.03        25.91        23.80 
TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5531 TCGA-EJ-7115 TCGA-EJ-7123 
       27.91        39.29        37.91        23.80        26.99        48.99 
TCGA-EJ-7317 TCGA-EJ-7327 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7784 
        9.37         5.75         6.28         0.30         2.10         5.49 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-G9-6333 TCGA-G9-6338 TCGA-G9-6351 
        2.60         1.71         2.30        63.29        54.21        39.95 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6369 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 
       33.14        27.02        27.98        33.34        36.46        22.16 
TCGA-HC-7078 TCGA-HC-7080 TCGA-HC-7213 TCGA-HC-7736 TCGA-HC-7744 TCGA-HC-7747 
        5.33         2.01         1.97         0.99         1.68         1.87 
TCGA-HC-7749 
        2.01 

$`DEL PEAK 12(6Q15) WILD-TYPE`
TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5746 TCGA-CH-5750 
        6.97        22.06        12.99        13.94        24.03        12.99 
TCGA-CH-5752 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5768 
       30.97        44.02        12.00         1.02        23.01        24.03 
TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 
        2.04        12.99        15.95         9.96        32.02        33.01 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5506 TCGA-EJ-5508 
       17.49        23.97         8.02        17.42        11.70        29.82 
TCGA-EJ-5510 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5521 TCGA-EJ-5522 
       24.23        25.71        34.88        25.74        27.68        46.13 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5532 
       27.42        25.97        18.64        13.05        41.82        29.92 
TCGA-EJ-5542 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7321 TCGA-EJ-7328 
       17.06        61.15         9.70         9.50         7.66         5.59 
TCGA-EJ-7781 TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        5.56         4.31         8.48         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6336 
        9.34         6.15         1.05        30.35        65.92        54.87 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6363 
       43.99        18.21        37.61        27.85        32.88        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6370 TCGA-G9-6371 
       27.65        26.43         3.32        28.77        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 
       15.02        15.98        14.83        10.65        16.83         1.02 
TCGA-HC-7077 TCGA-HC-7079 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7737 
       65.98         2.93         0.99         1.68         2.37         2.07 
TCGA-HC-7740 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        1.74         1.12        65.92        64.08        62.43        66.02 
TCGA-J4-8198 
        3.22 

  DEL PEAK 12(6Q15) MUTATED DEL PEAK 12(6Q15) WILD-TYPE 
                       0.30                        0.99 
  DEL PEAK 12(6Q15) MUTATED DEL PEAK 12(6Q15) WILD-TYPE 
                      63.29                       66.02 
  DEL PEAK 12(6Q15) MUTATED DEL PEAK 12(6Q15) WILD-TYPE 
                       6.28                       17.42 
[1] "0.3 - 63.3 (6.3)"  "1.0 - 66.0 (17.4)"
                 TCGA-CH-5737                  TCGA-CH-5738 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5761                  TCGA-CH-5762 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5767                  TCGA-CH-5768 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-G9-6362                  TCGA-G9-6363 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7747                  TCGA-HC-7749 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5761                  TCGA-CH-5762 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5767                  TCGA-CH-5768 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-G9-6362                  TCGA-G9-6363 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7747                  TCGA-HC-7749 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5761                  TCGA-CH-5762 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5767                  TCGA-CH-5768 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-FC-7708 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-G9-6362                  TCGA-G9-6363 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HC-7077                  TCGA-HC-7078 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7079                  TCGA-HC-7080 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7211                  TCGA-HC-7213 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7230                  TCGA-HC-7231 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HC-7736                  TCGA-HC-7737 
  "DEL PEAK 12(6Q15) MUTATED" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HC-7740                  TCGA-HC-7744 
"DEL PEAK 12(6Q15) WILD-TYPE"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7747                  TCGA-HC-7749 
  "DEL PEAK 12(6Q15) MUTATED"   "DEL PEAK 12(6Q15) MUTATED" 
                 TCGA-HC-7750                  TCGA-HI-7168 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK 12(6Q15) WILD-TYPE" "DEL PEAK 12(6Q15) WILD-TYPE" 
[1] "hr=" "1"  
D28V2, continuous
D28V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 12(6Q15) MUTATED      0   49
  DEL PEAK 12(6Q15) WILD-TYPE    5   92
     clus
vv    DEL PEAK 12(6Q15) MUTATED DEL PEAK 12(6Q15) WILD-TYPE
  NO                          0                           5
  YES                        49                          92

Clustering(29) Variable = Del Peak 13(7q36.1) mutation analysis
D29V1, survival
                               sevent
clus2                             0   1
  DEL PEAK 13(7Q36.1) MUTATED     5   0
  DEL PEAK 13(7Q36.1) WILD-TYPE 140   1
  DEL PEAK 13(7Q36.1) MUTATED DEL PEAK 13(7Q36.1) WILD-TYPE 
                            5                           141 
  DEL PEAK 13(7Q36.1) MUTATED DEL PEAK 13(7Q36.1) WILD-TYPE 
                            0                             1 
$`DEL PEAK 13(7Q36.1) MUTATED`
TCGA-EJ-5495 TCGA-EJ-5521 TCGA-G9-6348 TCGA-G9-6366 TCGA-G9-6496 
       19.89        27.68        37.61         3.32        33.34 

$`DEL PEAK 13(7Q36.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 
       28.96        12.43        19.53        13.02        17.62        17.49 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       23.97         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 
        5.98        29.82        36.03        24.23        25.91        25.71 
TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 
       23.80        34.88        25.74        27.91        39.29        37.91 
TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 
       46.13        27.42        25.97        18.64        13.05        41.82 
TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       23.80        29.92        17.06        26.99        48.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
        9.70         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 
        6.28         0.30         5.56         2.10         4.31         5.49 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 
        8.48         2.60         1.71         2.30         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
        1.41         9.34         6.15         1.05        30.35        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6351 
       63.29        54.87        54.21        43.99        18.21        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 
       26.43        28.77        27.98        26.50        27.81        16.60 
TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6499 
       17.03        21.83        12.82        11.70        47.41        36.46 
TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 
       22.16        15.02        15.98        14.83        10.65        16.83 
TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 
        1.02        65.98         5.33         2.93         2.01         0.99 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        1.97         1.68         2.37         0.99         2.07         1.74 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7169 
        1.68         1.87         2.01         1.12        65.92        64.08 
TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       62.43        66.02         3.22 

  DEL PEAK 13(7Q36.1) MUTATED DEL PEAK 13(7Q36.1) WILD-TYPE 
                         3.32                          0.30 
  DEL PEAK 13(7Q36.1) MUTATED DEL PEAK 13(7Q36.1) WILD-TYPE 
                        37.61                         66.02 
  DEL PEAK 13(7Q36.1) MUTATED DEL PEAK 13(7Q36.1) WILD-TYPE 
                        27.68                         15.98 
[1] "3.3 - 37.6 (27.7)" "0.3 - 66.0 (16.0)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "DEL PEAK 13(7Q36.1) MUTATED" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK 13(7Q36.1) WILD-TYPE"   "DEL PEAK 13(7Q36.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 13(7Q36.1) WILD-TYPE"   "DEL PEAK 13(7Q36.1) MUTATED" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "DEL PEAK 13(7Q36.1) MUTATED" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 13(7Q36.1) WILD-TYPE"   "DEL PEAK 13(7Q36.1) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "DEL PEAK 13(7Q36.1) MUTATED" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK 13(7Q36.1) WILD-TYPE"   "DEL PEAK 13(7Q36.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 13(7Q36.1) WILD-TYPE"   "DEL PEAK 13(7Q36.1) MUTATED" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "DEL PEAK 13(7Q36.1) MUTATED" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 13(7Q36.1) WILD-TYPE"   "DEL PEAK 13(7Q36.1) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "DEL PEAK 13(7Q36.1) MUTATED" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK 13(7Q36.1) WILD-TYPE"   "DEL PEAK 13(7Q36.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 13(7Q36.1) WILD-TYPE"   "DEL PEAK 13(7Q36.1) MUTATED" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "DEL PEAK 13(7Q36.1) MUTATED" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 13(7Q36.1) WILD-TYPE"   "DEL PEAK 13(7Q36.1) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7077                    TCGA-HC-7078 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7749 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 13(7Q36.1) WILD-TYPE" "DEL PEAK 13(7Q36.1) WILD-TYPE" 
[1] "hr=" "1"  
D29V2, continuous
D29V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 13(7Q36.1) MUTATED      0    5
  DEL PEAK 13(7Q36.1) WILD-TYPE    5  136
     clus
vv    DEL PEAK 13(7Q36.1) MUTATED DEL PEAK 13(7Q36.1) WILD-TYPE
  NO                            0                             5
  YES                           5                           136

Clustering(30) Variable = Del Peak 14(8p21.3) mutation analysis
D30V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 14(8P21.3) MUTATED   86  1
  DEL PEAK 14(8P21.3) WILD-TYPE 59  0
  DEL PEAK 14(8P21.3) MUTATED DEL PEAK 14(8P21.3) WILD-TYPE 
                           87                            59 
  DEL PEAK 14(8P21.3) MUTATED DEL PEAK 14(8P21.3) WILD-TYPE 
                            1                             0 
$`DEL PEAK 14(8P21.3) MUTATED`
TCGA-CH-5739 TCGA-CH-5741 TCGA-CH-5744 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
       22.06        12.99         1.97        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5764 TCGA-CH-5765 
        1.02         2.04         0.92        44.02         1.02        23.01 
TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5788 TCGA-CH-5790 
        1.02        15.06        24.03        12.99        26.96        32.02 
TCGA-CH-5791 TCGA-CH-5792 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5499 
       33.01         2.99        19.89        19.53        13.02        17.49 
TCGA-EJ-5501 TCGA-EJ-5504 TCGA-EJ-5507 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 
       23.97         7.53         5.98        24.23        25.91        25.71 
TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5524 TCGA-EJ-5525 
       27.91        39.29        37.91        27.68        27.42        25.97 
TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 
       18.64        13.05        41.82        23.80        29.92        17.06 
TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7314 TCGA-EJ-7321 TCGA-EJ-7328 TCGA-EJ-7330 
       26.99        48.99         9.70         7.66         5.59         6.28 
TCGA-EJ-7781 TCGA-EJ-7783 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7797 TCGA-FC-7708 
        5.56         4.31         1.71         2.30         6.15         1.05 
TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6361 
       65.92        63.29        54.21        43.99        18.21        33.14 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6366 TCGA-G9-6369 TCGA-G9-6371 
       27.02        32.65        27.65         3.32        27.98        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6384 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 
       16.60        17.03        12.82        47.41        33.34        22.16 
TCGA-G9-7521 TCGA-G9-7522 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7211 
       15.98        14.83         1.02        65.98         5.33         0.99 
TCGA-HC-7213 TCGA-HC-7231 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HI-7168 
        1.97         2.37         1.68         1.87         2.01        65.92 
TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       62.43        66.02         3.22 

$`DEL PEAK 14(8P21.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5740 TCGA-CH-5743 TCGA-CH-5746 TCGA-CH-5748 
        2.99         6.97         1.02        13.94        24.03         1.02 
TCGA-CH-5763 TCGA-CH-5769 TCGA-CH-5772 TCGA-CH-5789 TCGA-CH-5794 TCGA-EJ-5494 
       12.00         2.04        15.95         9.96        28.96        12.43 
TCGA-EJ-5498 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 
       17.62         8.02        17.42        14.70        11.70        29.82 
TCGA-EJ-5509 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5522 TCGA-EJ-7125 
       36.03        23.80        34.88        25.74        46.13        61.15 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7327 TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7784 
        9.50         9.37         5.75         0.30         2.10         5.49 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 
        8.48         2.60         7.13        17.29         1.41         9.34 
TCGA-G9-6329 TCGA-G9-6336 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       30.35        54.87        37.61        39.95        27.85        32.88 
TCGA-G9-6365 TCGA-G9-6367 TCGA-G9-6370 TCGA-G9-6378 TCGA-G9-6385 TCGA-G9-6499 
       26.43        28.77        26.50        21.83        11.70        36.46 
TCGA-G9-7519 TCGA-G9-7523 TCGA-G9-7525 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7230 
       15.02        10.65        16.83         2.93         2.01         1.68 
TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7750 TCGA-HI-7169 
        0.99         2.07         1.74         1.12        64.08 

  DEL PEAK 14(8P21.3) MUTATED DEL PEAK 14(8P21.3) WILD-TYPE 
                         0.92                          0.30 
  DEL PEAK 14(8P21.3) MUTATED DEL PEAK 14(8P21.3) WILD-TYPE 
                        66.02                         64.08 
  DEL PEAK 14(8P21.3) MUTATED DEL PEAK 14(8P21.3) WILD-TYPE 
                        18.64                         12.43 
[1] "0.9 - 66.0 (18.6)" "0.3 - 64.1 (12.4)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5765                    TCGA-CH-5766 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6343                    TCGA-G9-6348 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6364                    TCGA-G9-6365 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7077                    TCGA-HC-7078 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5765                    TCGA-CH-5766 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6343                    TCGA-G9-6348 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6364                    TCGA-G9-6365 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7077                    TCGA-HC-7078 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5765                    TCGA-CH-5766 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-FC-7708 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6343                    TCGA-G9-6348 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6364                    TCGA-G9-6365 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
  "DEL PEAK 14(8P21.3) MUTATED" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7077                    TCGA-HC-7078 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7079                    TCGA-HC-7080 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7213 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7230                    TCGA-HC-7231 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7736                    TCGA-HC-7737 
"DEL PEAK 14(8P21.3) WILD-TYPE" "DEL PEAK 14(8P21.3) WILD-TYPE" 
                   TCGA-HC-7740                    TCGA-HC-7744 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7749 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HC-7750                    TCGA-HI-7168 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 14(8P21.3) WILD-TYPE"   "DEL PEAK 14(8P21.3) MUTATED" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK 14(8P21.3) MUTATED"   "DEL PEAK 14(8P21.3) MUTATED" 
[1] "hr=" "1"  
D30V2, continuous
D30V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 14(8P21.3) MUTATED      3   84
  DEL PEAK 14(8P21.3) WILD-TYPE    2   57
     clus
vv    DEL PEAK 14(8P21.3) MUTATED DEL PEAK 14(8P21.3) WILD-TYPE
  NO                            3                             2
  YES                          84                            57

Clustering(31) Variable = Del Peak 15(8p11.21) mutation analysis
D31V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 15(8P11.21) MUTATED   46  1
  DEL PEAK 15(8P11.21) WILD-TYPE 99  0
  DEL PEAK 15(8P11.21) MUTATED DEL PEAK 15(8P11.21) WILD-TYPE 
                            47                             99 
  DEL PEAK 15(8P11.21) MUTATED DEL PEAK 15(8P11.21) WILD-TYPE 
                             1                              0 
$`DEL PEAK 15(8P11.21) MUTATED`
TCGA-CH-5739 TCGA-CH-5744 TCGA-CH-5750 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 
       22.06         1.97        12.99         1.02         2.04         0.92 
TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5790 
        1.02        23.01         1.02        24.03        12.99        32.02 
TCGA-CH-5794 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5507 TCGA-EJ-5510 TCGA-EJ-5517 
       28.96        17.49        23.97         5.98        24.23        27.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5532 TCGA-EJ-5542 
       27.68        46.13        13.05        41.82        29.92        17.06 
TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7330 TCGA-EJ-7783 TCGA-EJ-7789 TCGA-FC-7708 
       26.99        48.99         6.28         4.31         2.30         1.05 
TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6361 TCGA-G9-6364 
       65.92        63.29        43.99        18.21        33.14        27.65 
TCGA-G9-6369 TCGA-G9-6377 TCGA-G9-6494 TCGA-G9-7510 TCGA-G9-7521 TCGA-HC-7077 
       27.98        17.03        47.41        22.16        15.98        65.98 
TCGA-HC-7078 TCGA-HC-7231 TCGA-HI-7168 TCGA-HI-7170 TCGA-HI-7171 
        5.33         2.37        65.92        62.43        66.02 

$`DEL PEAK 15(8P11.21) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5746 
        2.99         6.97         1.02        12.99        13.94        24.03 
TCGA-CH-5748 TCGA-CH-5751 TCGA-CH-5752 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5767 
        1.02        35.01        30.97        44.02        12.00        15.06 
TCGA-CH-5769 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5791 TCGA-CH-5792 
        2.04        15.95        26.96         9.96        33.01         2.99 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5502 
       12.43        19.89        19.53        13.02        17.62         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5509 
       17.42         7.53        14.70        11.70        29.82        36.03 
TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5518 
       25.91        25.71        23.80        34.88        25.74        39.29 
TCGA-EJ-5519 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5531 TCGA-EJ-7125 
       37.91        27.42        25.97        18.64        23.80        61.15 
TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
        9.70         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 
        0.30         5.56         2.10         5.49         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        1.71         7.13        17.29         1.41         9.34         6.15 
TCGA-G9-6329 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 
       30.35        54.87        54.21        37.61        39.95        27.85 
TCGA-G9-6356 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       32.88        27.02        32.65        26.43         3.32        28.77 
TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 
       26.50        27.81        16.60        21.83        12.82        11.70 
TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 
       33.34        36.46        15.02        14.83        10.65        16.83 
TCGA-H9-7775 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 
        1.02         2.93         2.01         0.99         1.97         1.68 
TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 
        0.99         2.07         1.74         1.68         1.87         2.01 
TCGA-HC-7750 TCGA-HI-7169 TCGA-J4-8198 
        1.12        64.08         3.22 

  DEL PEAK 15(8P11.21) MUTATED DEL PEAK 15(8P11.21) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 15(8P11.21) MUTATED DEL PEAK 15(8P11.21) WILD-TYPE 
                         66.02                          64.08 
  DEL PEAK 15(8P11.21) MUTATED DEL PEAK 15(8P11.21) WILD-TYPE 
                         23.01                          13.94 
[1] "0.9 - 66.0 (23.0)" "0.3 - 64.1 (13.9)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
  "DEL PEAK 15(8P11.21) MUTATED"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 15(8P11.21) WILD-TYPE" "DEL PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 15(8P11.21) WILD-TYPE"   "DEL PEAK 15(8P11.21) MUTATED" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 15(8P11.21) MUTATED" "DEL PEAK 15(8P11.21) WILD-TYPE" 
[1] "hr=" "1"  
D31V2, continuous
D31V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 15(8P11.21) MUTATED      0   47
  DEL PEAK 15(8P11.21) WILD-TYPE    5   94
     clus
vv    DEL PEAK 15(8P11.21) MUTATED DEL PEAK 15(8P11.21) WILD-TYPE
  NO                             0                              5
  YES                           47                             94

Clustering(32) Variable = Del Peak 16(10q23.31) mutation analysis
D32V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 16(10Q23.31) MUTATED   52  1
  DEL PEAK 16(10Q23.31) WILD-TYPE 93  0
  DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE 
                             53                              93 
  DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE 
                              1                               0 
$`DEL PEAK 16(10Q23.31) MUTATED`
TCGA-CH-5737 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5744 TCGA-CH-5751 TCGA-CH-5754 
        2.99         1.02        12.99         1.97        35.01         2.04 
TCGA-CH-5766 TCGA-CH-5769 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5794 TCGA-EJ-5495 
        1.02         2.04        32.02        33.01        28.96        19.89 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5504 TCGA-EJ-5507 TCGA-EJ-5510 TCGA-EJ-5514 
       17.49        23.97         7.53         5.98        24.23        23.80 
TCGA-EJ-5516 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 
       25.74        39.29        37.91        27.68        46.13        27.42 
TCGA-EJ-5527 TCGA-EJ-5542 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7327 TCGA-EJ-7788 
       13.05        17.06         9.70         9.50         5.75         1.71 
TCGA-FC-7708 TCGA-G9-6332 TCGA-G9-6342 TCGA-G9-6348 TCGA-G9-6356 TCGA-G9-6361 
        1.05        65.92        43.99        37.61        32.88        33.14 
TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6499 TCGA-G9-7521 
       32.65        27.65        16.60        17.03        36.46        15.98 
TCGA-G9-7522 TCGA-G9-7525 TCGA-HC-7077 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 
       14.83        16.83        65.98         1.97         1.68         2.37 
TCGA-HC-7737 TCGA-HC-7744 TCGA-HC-7749 TCGA-HI-7168 TCGA-HI-7171 
        2.07         1.68         2.01        65.92        66.02 

$`DEL PEAK 16(10Q23.31) WILD-TYPE`
TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5743 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 
        6.97        22.06        13.94        24.03         1.02        12.99 
TCGA-CH-5752 TCGA-CH-5753 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
       30.97         1.02         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 
       23.01        15.06        24.03        12.99        15.95        26.96 
TCGA-CH-5789 TCGA-CH-5792 TCGA-EJ-5494 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
        9.96         2.99        12.43        19.53        13.02        17.62 
TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5509 
        8.02        17.42        14.70        11.70        29.82        36.03 
TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5517 TCGA-EJ-5525 TCGA-EJ-5526 
       25.91        25.71        34.88        27.91        25.97        18.64 
TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       41.82        23.80        29.92        26.99        48.99        61.15 
TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 
        9.37         7.66         5.59         6.28         0.30         5.56 
TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7789 
        2.10         4.31         5.49         8.48         2.60         2.30 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-G9-6329 
        7.13        17.29         1.41         9.34         6.15        30.35 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6343 TCGA-G9-6351 TCGA-G9-6353 
       63.29        54.87        54.21        18.21        39.95        27.85 
TCGA-G9-6362 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       27.02        26.43         3.32        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 
       27.81        21.83        12.82        11.70        47.41        33.34 
TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7523 TCGA-H9-7775 TCGA-HC-7078 TCGA-HC-7079 
       22.16        15.02        10.65         1.02         5.33         2.93 
TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7736 TCGA-HC-7740 TCGA-HC-7747 TCGA-HC-7750 
        2.01         0.99         0.99         1.74         1.87         1.12 
TCGA-HI-7169 TCGA-HI-7170 TCGA-J4-8198 
       64.08        62.43         3.22 

  DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE 
                           1.02                            0.30 
  DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE 
                          66.02                           64.08 
  DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE 
                          17.06                           15.02 
[1] "1.0 - 66.0 (17.1)" "0.3 - 64.1 (15.0)"
                     TCGA-CH-5737                      TCGA-CH-5738 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-CH-5791                      TCGA-CH-5792 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-FC-7708 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6364                      TCGA-G9-6365 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6377                      TCGA-G9-6378 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-7522                      TCGA-G9-7523 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7077                      TCGA-HC-7078 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7079                      TCGA-HC-7080 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7213 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7230                      TCGA-HC-7231 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7736                      TCGA-HC-7737 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7740                      TCGA-HC-7744 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7749 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7750                      TCGA-HI-7168 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5737                      TCGA-CH-5738 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-CH-5791                      TCGA-CH-5792 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-FC-7708 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6364                      TCGA-G9-6365 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6377                      TCGA-G9-6378 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-7522                      TCGA-G9-7523 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7077                      TCGA-HC-7078 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7079                      TCGA-HC-7080 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7213 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7230                      TCGA-HC-7231 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7736                      TCGA-HC-7737 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7740                      TCGA-HC-7744 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7749 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7750                      TCGA-HI-7168 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5737                      TCGA-CH-5738 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-CH-5791                      TCGA-CH-5792 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-FC-7708 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6364                      TCGA-G9-6365 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-6377                      TCGA-G9-6378 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-G9-7522                      TCGA-G9-7523 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7077                      TCGA-HC-7078 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7079                      TCGA-HC-7080 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7213 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7230                      TCGA-HC-7231 
  "DEL PEAK 16(10Q23.31) MUTATED"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7736                      TCGA-HC-7737 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7740                      TCGA-HC-7744 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7749 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HC-7750                      TCGA-HI-7168 
"DEL PEAK 16(10Q23.31) WILD-TYPE"   "DEL PEAK 16(10Q23.31) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 16(10Q23.31) WILD-TYPE" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 16(10Q23.31) MUTATED" "DEL PEAK 16(10Q23.31) WILD-TYPE" 
[1] "hr=" "1"  
D32V2, continuous
D32V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 16(10Q23.31) MUTATED      1   52
  DEL PEAK 16(10Q23.31) WILD-TYPE    4   89
     clus
vv    DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  NO                              1                               4
  YES                            52                              89

Clustering(33) Variable = Del Peak 17(11q23.2) mutation analysis
D33V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 17(11Q23.2) MUTATED    16   0
  DEL PEAK 17(11Q23.2) WILD-TYPE 129   1
  DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE 
                            16                            130 
  DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE 
                             0                              1 
$`DEL PEAK 17(11Q23.2) MUTATED`
TCGA-CH-5761 TCGA-CH-5769 TCGA-CH-5790 TCGA-CH-5792 TCGA-EJ-5504 TCGA-EJ-5509 
        0.92         2.04        32.02         2.99         7.53        36.03 
TCGA-EJ-5518 TCGA-EJ-5527 TCGA-EJ-7330 TCGA-G9-6363 TCGA-G9-6377 TCGA-G9-6494 
       39.29        13.05         6.28        32.65        17.03        47.41 
TCGA-G9-7522 TCGA-HC-7077 TCGA-HC-7213 TCGA-HC-7736 
       14.83        65.98         1.97         0.99 

$`DEL PEAK 17(11Q23.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 
        1.02         2.04        44.02        12.00         1.02        23.01 
TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 
        1.02        15.06        24.03        12.99        15.95        26.96 
TCGA-CH-5789 TCGA-CH-5791 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 
        9.96        33.01        28.96        12.43        19.89        19.53 
TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 
       13.02        17.62        17.49        23.97         8.02        17.42 
TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5510 TCGA-EJ-5511 
       14.70        11.70         5.98        29.82        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5519 
       25.71        23.80        34.88        25.74        27.91        37.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5530 
       27.68        46.13        27.42        25.97        18.64        41.82 
TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       23.80        29.92        17.06        26.99        48.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
        9.70         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        2.60         1.71         2.30         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 
        9.34         6.15         1.05        30.35        65.92        63.29 
TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       54.87        54.21        43.99        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6364 TCGA-G9-6365 
       27.85        32.88        33.14        27.02        27.65        26.43 
TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 
        3.32        28.77        27.98        26.50        27.81        16.60 
TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 
       21.83        12.82        11.70        33.34        36.46        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7078 
       15.02        15.98        10.65        16.83         1.02         5.33 
TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7737 
        2.93         2.01         0.99         1.68         2.37         2.07 
TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 
        1.74         1.68         1.87         2.01         1.12        65.92 
TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       64.08        62.43        66.02         3.22 

  DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE 
                         65.98                          66.02 
  DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE 
                        13.940                         16.945 
[1] "0.9 - 66.0 (13.9)" "0.3 - 66.0 (16.9)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 17(11Q23.2) WILD-TYPE"   "DEL PEAK 17(11Q23.2) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK 17(11Q23.2) MUTATED" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 17(11Q23.2) WILD-TYPE" "DEL PEAK 17(11Q23.2) WILD-TYPE" 
[1] "hr=" "1"  
D33V2, continuous
D33V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 17(11Q23.2) MUTATED      0   16
  DEL PEAK 17(11Q23.2) WILD-TYPE    5  125
     clus
vv    DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE
  NO                             0                              5
  YES                           16                            125

Clustering(34) Variable = Del Peak 18(12p13.2) mutation analysis
D34V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 18(12P13.2) MUTATED    31   0
  DEL PEAK 18(12P13.2) WILD-TYPE 114   1
  DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE 
                            31                            115 
  DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE 
                             0                              1 
$`DEL PEAK 18(12P13.2) MUTATED`
TCGA-CH-5744 TCGA-CH-5748 TCGA-CH-5751 TCGA-CH-5752 TCGA-CH-5761 TCGA-CH-5766 
        1.97         1.02        35.01        30.97         0.92         1.02 
TCGA-CH-5768 TCGA-CH-5792 TCGA-EJ-5501 TCGA-EJ-5507 TCGA-EJ-5510 TCGA-EJ-5514 
       24.03         2.99        23.97         5.98        24.23        23.80 
TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5526 TCGA-EJ-7314 TCGA-EJ-7315 
       39.29        37.91        46.13        18.64         9.70         9.50 
TCGA-EJ-7781 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-G9-6333 TCGA-G9-6362 TCGA-G9-6364 
        5.56         1.71         2.30        63.29        27.02        27.65 
TCGA-G9-6384 TCGA-G9-6499 TCGA-G9-7521 TCGA-G9-7525 TCGA-HC-7230 TCGA-HC-7736 
       12.82        36.46        15.98        16.83         1.68         0.99 
TCGA-HI-7168 
       65.92 

$`DEL PEAK 18(12P13.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5746 TCGA-CH-5750 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5763 
       24.03        12.99         1.02         2.04        44.02        12.00 
TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5767 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
        1.02        23.01        15.06         2.04        12.99        15.95 
TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5794 TCGA-EJ-5494 
       26.96         9.96        32.02        33.01        28.96        12.43 
TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5502 
       19.89        19.53        13.02        17.62        17.49         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5509 
       17.42         7.53        14.70        11.70        29.82        36.03 
TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5521 
       25.91        25.71        34.88        25.74        27.91        27.68 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 
       27.42        25.97        13.05        41.82        23.80        29.92 
TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7317 TCGA-EJ-7321 
       17.06        26.99        48.99        61.15         9.37         7.66 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 
        5.75         5.59         6.28         0.30         2.10         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        5.49         8.48         2.60         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6336 
        9.34         6.15         1.05        30.35        65.92        54.87 
TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 
       54.21        43.99        18.21        37.61        39.95        27.85 
TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6363 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       32.88        33.14        32.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       27.98        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7522 
       11.70        47.41        33.34        22.16        15.02        14.83 
TCGA-G9-7523 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 
       10.65         1.02        65.98         5.33         2.93         2.01 
TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7231 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 
        0.99         1.97         2.37         2.07         1.74         1.68 
TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        1.87         2.01         1.12        64.08        62.43        66.02 
TCGA-J4-8198 
        3.22 

  DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE 
                         65.92                          66.02 
  DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE 
                         16.83                          16.60 
[1] "0.9 - 65.9 (16.8)" "0.3 - 66.0 (16.6)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 18(12P13.2) MUTATED"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
  "DEL PEAK 18(12P13.2) MUTATED"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
  "DEL PEAK 18(12P13.2) MUTATED"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 18(12P13.2) MUTATED"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
  "DEL PEAK 18(12P13.2) MUTATED"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
  "DEL PEAK 18(12P13.2) MUTATED"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 18(12P13.2) MUTATED"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
  "DEL PEAK 18(12P13.2) MUTATED"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
  "DEL PEAK 18(12P13.2) MUTATED"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7230                     TCGA-HC-7231 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK 18(12P13.2) MUTATED" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 18(12P13.2) WILD-TYPE"   "DEL PEAK 18(12P13.2) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 18(12P13.2) WILD-TYPE" "DEL PEAK 18(12P13.2) WILD-TYPE" 
[1] "hr=" "1"  
D34V2, continuous
D34V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 18(12P13.2) MUTATED      1   30
  DEL PEAK 18(12P13.2) WILD-TYPE    4  111
     clus
vv    DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE
  NO                             1                              4
  YES                           30                            111

Clustering(35) Variable = Del Peak 19(13q14.13) mutation analysis
D35V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 19(13Q14.13) MUTATED   67  1
  DEL PEAK 19(13Q14.13) WILD-TYPE 78  0
  DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE 
                             68                              78 
  DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE 
                              1                               0 
$`DEL PEAK 19(13Q14.13) MUTATED`
TCGA-CH-5737 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5748 TCGA-CH-5752 
        2.99        22.06         1.02        12.99         1.02        30.97 
TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5768 TCGA-CH-5771 
        2.04        44.02         1.02        23.01        24.03        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5495 TCGA-EJ-5496 
       15.95        26.96         2.99        28.96        19.89        19.53 
TCGA-EJ-5499 TCGA-EJ-5504 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       17.49         7.53         5.98        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5516 TCGA-EJ-5518 TCGA-EJ-5521 TCGA-EJ-5525 
       25.71        23.80        25.74        39.29        27.68        25.97 
TCGA-EJ-5527 TCGA-EJ-5531 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7315 TCGA-EJ-7317 
       13.05        23.80        26.99        48.99         9.50         9.37 
TCGA-EJ-7321 TCGA-EJ-7330 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 
        7.66         6.28         5.56         2.10         4.31         5.49 
TCGA-EJ-7786 TCGA-EJ-7789 TCGA-EJ-7794 TCGA-G9-6329 TCGA-G9-6348 TCGA-G9-6361 
        2.60         2.30         9.34        30.35        37.61        33.14 
TCGA-G9-6365 TCGA-G9-6369 TCGA-G9-6378 TCGA-G9-6494 TCGA-G9-7510 TCGA-G9-7519 
       26.43        27.98        21.83        47.41        22.16        15.02 
TCGA-G9-7521 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7080 TCGA-HC-7213 
       15.98         1.02        65.98         5.33         2.01         1.97 
TCGA-HC-7231 TCGA-HC-7737 TCGA-HC-7744 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 
        2.37         2.07         1.68         2.01         1.12        65.92 
TCGA-HI-7171 TCGA-J4-8198 
       66.02         3.22 

$`DEL PEAK 19(13Q14.13) WILD-TYPE`
TCGA-CH-5738 TCGA-CH-5743 TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5750 TCGA-CH-5751 
        6.97        13.94         1.97        24.03        12.99        35.01 
TCGA-CH-5753 TCGA-CH-5761 TCGA-CH-5763 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5769 
        1.02         0.92        12.00         1.02        15.06         2.04 
TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-EJ-5494 TCGA-EJ-5497 TCGA-EJ-5498 
        9.96        32.02        33.01        12.43        13.02        17.62 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 
       23.97         8.02        17.42        14.70        11.70        29.82 
TCGA-EJ-5515 TCGA-EJ-5517 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5526 
       34.88        27.91        37.91        46.13        27.42        18.64 
TCGA-EJ-5530 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7327 
       41.82        29.92        17.06        61.15         9.70         5.75 
TCGA-EJ-7328 TCGA-EJ-7331 TCGA-EJ-7785 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 
        5.59         0.30         8.48         1.71         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 
        1.41         6.15         1.05        65.92        63.29        54.87 
TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       54.21        43.99        18.21        39.95        27.85        32.88 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6370 
       27.02        32.65        27.65         3.32        28.77        26.50 
TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6496 
       27.81        16.60        17.03        12.82        11.70        33.34 
TCGA-G9-6499 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-HC-7079 TCGA-HC-7211 
       36.46        14.83        10.65        16.83         2.93         0.99 
TCGA-HC-7230 TCGA-HC-7736 TCGA-HC-7740 TCGA-HC-7747 TCGA-HI-7169 TCGA-HI-7170 
        1.68         0.99         1.74         1.87        64.08        62.43 

  DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE 
                           1.02                            0.30 
  DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE 
                          66.02                           65.92 
  DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE 
                         15.965                          16.930 
[1] "1.0 - 66.0 (16.0)" "0.3 - 65.9 (16.9)"
                     TCGA-CH-5737                      TCGA-CH-5738 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5765                      TCGA-CH-5766 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5772                      TCGA-CH-5788 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7797                      TCGA-FC-7708 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-7519                      TCGA-G9-7521 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7077                      TCGA-HC-7078 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7079                      TCGA-HC-7080 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7211                      TCGA-HC-7213 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7230                      TCGA-HC-7231 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7736                      TCGA-HC-7737 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7740                      TCGA-HC-7744 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7749 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7750                      TCGA-HI-7168 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5737                      TCGA-CH-5738 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5765                      TCGA-CH-5766 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5772                      TCGA-CH-5788 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7797                      TCGA-FC-7708 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-7519                      TCGA-G9-7521 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7077                      TCGA-HC-7078 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7079                      TCGA-HC-7080 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7211                      TCGA-HC-7213 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7230                      TCGA-HC-7231 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7736                      TCGA-HC-7737 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7740                      TCGA-HC-7744 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7749 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7750                      TCGA-HI-7168 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5737                      TCGA-CH-5738 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5765                      TCGA-CH-5766 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5772                      TCGA-CH-5788 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-EJ-7797                      TCGA-FC-7708 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
  "DEL PEAK 19(13Q14.13) MUTATED" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-7519                      TCGA-G9-7521 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7077                      TCGA-HC-7078 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7079                      TCGA-HC-7080 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7211                      TCGA-HC-7213 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7230                      TCGA-HC-7231 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7736                      TCGA-HC-7737 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7740                      TCGA-HC-7744 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7749 
"DEL PEAK 19(13Q14.13) WILD-TYPE"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HC-7750                      TCGA-HI-7168 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 19(13Q14.13) WILD-TYPE" "DEL PEAK 19(13Q14.13) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 19(13Q14.13) MUTATED"   "DEL PEAK 19(13Q14.13) MUTATED" 
[1] "hr=" "1"  
D35V2, continuous
D35V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 19(13Q14.13) MUTATED      4   64
  DEL PEAK 19(13Q14.13) WILD-TYPE    1   77
     clus
vv    DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE
  NO                              4                               1
  YES                            64                              77

Clustering(36) Variable = Del Peak 20(16q22.3) mutation analysis
D36V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 20(16Q22.3) MUTATED    44   1
  DEL PEAK 20(16Q22.3) WILD-TYPE 101   0
  DEL PEAK 20(16Q22.3) MUTATED DEL PEAK 20(16Q22.3) WILD-TYPE 
                            45                            101 
  DEL PEAK 20(16Q22.3) MUTATED DEL PEAK 20(16Q22.3) WILD-TYPE 
                             1                              0 
$`DEL PEAK 20(16Q22.3) MUTATED`
TCGA-CH-5739 TCGA-CH-5744 TCGA-CH-5751 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5764 
       22.06         1.97        35.01         1.02         2.04         1.02 
TCGA-CH-5788 TCGA-CH-5791 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5498 TCGA-EJ-5508 
       26.96        33.01        19.89        19.53        17.62        29.82 
TCGA-EJ-5511 TCGA-EJ-5514 TCGA-EJ-5516 TCGA-EJ-5521 TCGA-EJ-5525 TCGA-EJ-5527 
       25.91        23.80        25.74        27.68        25.97        13.05 
TCGA-EJ-7123 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7781 TCGA-EJ-7783 
       48.99         7.66         5.75         5.59         5.56         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7789 TCGA-EJ-7794 TCGA-G9-6329 TCGA-G9-6342 
        5.49         8.48         2.30         9.34        30.35        43.99 
TCGA-G9-6343 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6373 TCGA-G9-6384 TCGA-G9-6496 
       18.21        33.14        27.02        16.60        12.82        33.34 
TCGA-G9-6499 TCGA-G9-7521 TCGA-G9-7523 TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7736 
       36.46        15.98        10.65         0.99         1.97         0.99 
TCGA-HC-7749 TCGA-HI-7168 TCGA-HI-7171 
        2.01        65.92        66.02 

$`DEL PEAK 20(16Q22.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5746 
        2.99         6.97         1.02        12.99        13.94        24.03 
TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 
        1.02        12.99        30.97         0.92        44.02        12.00 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 
       15.95         9.96        32.02         2.99        28.96        12.43 
TCGA-EJ-5497 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 
       13.02        17.49        23.97         8.02        17.42         7.53 
TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5512 
       14.70        11.70         5.98        36.03        24.23        25.71 
TCGA-EJ-5515 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5524 
       34.88        27.91        39.29        37.91        46.13        27.42 
TCGA-EJ-5526 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
       18.64        41.82        23.80        29.92        17.06        26.99 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7330 TCGA-EJ-7331 
       61.15         9.70         9.50         9.37         6.28         0.30 
TCGA-EJ-7782 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        2.10         2.60         1.71         7.13        17.29         1.41 
TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        6.15         1.05        65.92        63.29        54.87        54.21 
TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6363 TCGA-G9-6364 
       37.61        39.95        27.85        32.88        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-7510 TCGA-G9-7519 
       17.03        21.83        11.70        47.41        22.16        15.02 
TCGA-G9-7522 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 
       14.83        16.83         1.02        65.98         5.33         2.93 
TCGA-HC-7080 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 
        2.01         1.68         2.37         2.07         1.74         1.68 
TCGA-HC-7747 TCGA-HC-7750 TCGA-HI-7169 TCGA-HI-7170 TCGA-J4-8198 
        1.87         1.12        64.08        62.43         3.22 

  DEL PEAK 20(16Q22.3) MUTATED DEL PEAK 20(16Q22.3) WILD-TYPE 
                          0.99                           0.30 
  DEL PEAK 20(16Q22.3) MUTATED DEL PEAK 20(16Q22.3) WILD-TYPE 
                         66.02                          65.98 
  DEL PEAK 20(16Q22.3) MUTATED DEL PEAK 20(16Q22.3) WILD-TYPE 
                         17.62                          15.95 
[1] "1.0 - 66.0 (17.6)" "0.3 - 66.0 (15.9)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
  "DEL PEAK 20(16Q22.3) MUTATED"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 20(16Q22.3) WILD-TYPE"   "DEL PEAK 20(16Q22.3) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 20(16Q22.3) WILD-TYPE" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 20(16Q22.3) MUTATED" "DEL PEAK 20(16Q22.3) WILD-TYPE" 
[1] "hr=" "1"  
D36V2, continuous
D36V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 20(16Q22.3) MUTATED      0   45
  DEL PEAK 20(16Q22.3) WILD-TYPE    5   96
     clus
vv    DEL PEAK 20(16Q22.3) MUTATED DEL PEAK 20(16Q22.3) WILD-TYPE
  NO                             0                              5
  YES                           45                             96

Clustering(37) Variable = Del Peak 21(16q24.1) mutation analysis
D37V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 21(16Q24.1) MUTATED   57  1
  DEL PEAK 21(16Q24.1) WILD-TYPE 88  0
  DEL PEAK 21(16Q24.1) MUTATED DEL PEAK 21(16Q24.1) WILD-TYPE 
                            58                             88 
  DEL PEAK 21(16Q24.1) MUTATED DEL PEAK 21(16Q24.1) WILD-TYPE 
                             1                              0 
$`DEL PEAK 21(16Q24.1) MUTATED`
TCGA-CH-5739 TCGA-CH-5744 TCGA-CH-5751 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 
       22.06         1.97        35.01         1.02         2.04         0.92 
TCGA-CH-5762 TCGA-CH-5764 TCGA-CH-5766 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 
       44.02         1.02         1.02        12.99        15.95        26.96 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5498 
       32.02        33.01         2.99        19.89        19.53        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5508 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5514 
       17.49        23.97        29.82        24.23        25.91        23.80 
TCGA-EJ-5516 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-7123 
       25.74        27.42        25.97        18.64        13.05        48.99 
TCGA-EJ-7314 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7781 TCGA-EJ-7783 
        9.70         7.66         5.75         5.59         5.56         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7789 TCGA-G9-6329 TCGA-G9-6342 TCGA-G9-6343 
        5.49         8.48         2.30        30.35        43.99        18.21 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6384 TCGA-G9-6496 
       33.14        27.02        16.60        17.03        12.82        33.34 
TCGA-G9-6499 TCGA-G9-7521 TCGA-G9-7523 TCGA-HC-7078 TCGA-HC-7211 TCGA-HC-7213 
       36.46        15.98        10.65         5.33         0.99         1.97 
TCGA-HC-7736 TCGA-HC-7749 TCGA-HI-7168 TCGA-HI-7171 
        0.99         2.01        65.92        66.02 

$`DEL PEAK 21(16Q24.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5746 
        2.99         6.97         1.02        12.99        13.94        24.03 
TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5763 TCGA-CH-5765 TCGA-CH-5767 
        1.02        12.99        30.97        12.00        23.01        15.06 
TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5789 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5497 
       24.03         2.04         9.96        28.96        12.43        13.02 
TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 
        8.02        17.42         7.53        14.70        11.70         5.98 
TCGA-EJ-5509 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 
       36.03        25.71        34.88        27.91        39.29        37.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 
       27.68        46.13        41.82        23.80        29.92        17.06 
TCGA-EJ-7115 TCGA-EJ-7125 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7330 TCGA-EJ-7331 
       26.99        61.15         9.50         9.37         6.28         0.30 
TCGA-EJ-7782 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        2.10         2.60         1.71         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-FC-7708 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 
        9.34         6.15         1.05        65.92        63.29        54.87 
TCGA-G9-6338 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6363 
       54.21        37.61        39.95        27.85        32.88        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       27.65        26.43         3.32        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6378 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-7510 TCGA-G9-7519 
       27.81        21.83        11.70        47.41        22.16        15.02 
TCGA-G9-7522 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7079 TCGA-HC-7080 
       14.83        16.83         1.02        65.98         2.93         2.01 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 
        1.68         2.37         2.07         1.74         1.68         1.87 
TCGA-HC-7750 TCGA-HI-7169 TCGA-HI-7170 TCGA-J4-8198 
        1.12        64.08        62.43         3.22 

  DEL PEAK 21(16Q24.1) MUTATED DEL PEAK 21(16Q24.1) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 21(16Q24.1) MUTATED DEL PEAK 21(16Q24.1) WILD-TYPE 
                         66.02                          65.98 
  DEL PEAK 21(16Q24.1) MUTATED DEL PEAK 21(16Q24.1) WILD-TYPE 
                         17.26                          15.04 
[1] "0.9 - 66.0 (17.3)" "0.3 - 66.0 (15.0)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
  "DEL PEAK 21(16Q24.1) MUTATED"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 21(16Q24.1) WILD-TYPE"   "DEL PEAK 21(16Q24.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 21(16Q24.1) WILD-TYPE" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 21(16Q24.1) MUTATED" "DEL PEAK 21(16Q24.1) WILD-TYPE" 
[1] "hr=" "1"  
D37V2, continuous
D37V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 21(16Q24.1) MUTATED      2   56
  DEL PEAK 21(16Q24.1) WILD-TYPE    3   85
     clus
vv    DEL PEAK 21(16Q24.1) MUTATED DEL PEAK 21(16Q24.1) WILD-TYPE
  NO                             2                              3
  YES                           56                             85

Clustering(38) Variable = Del Peak 22(17p13.1) mutation analysis
D38V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 22(17P13.1) MUTATED    38   1
  DEL PEAK 22(17P13.1) WILD-TYPE 107   0
  DEL PEAK 22(17P13.1) MUTATED DEL PEAK 22(17P13.1) WILD-TYPE 
                            39                            107 
  DEL PEAK 22(17P13.1) MUTATED DEL PEAK 22(17P13.1) WILD-TYPE 
                             1                              0 
$`DEL PEAK 22(17P13.1) MUTATED`
TCGA-CH-5751 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5764 TCGA-CH-5766 
       35.01         2.04         0.92        44.02         1.02         1.02 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5794 TCGA-EJ-5507 TCGA-EJ-5514 TCGA-EJ-5519 
       32.02        33.01        28.96         5.98        23.80        37.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 
       27.68        46.13        27.42        25.97        18.64        13.05 
TCGA-EJ-7315 TCGA-EJ-7321 TCGA-EJ-7328 TCGA-EJ-7781 TCGA-EJ-7797 TCGA-G9-6342 
        9.50         7.66         5.59         5.56         6.15        43.99 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6384 TCGA-G9-6494 TCGA-G9-6499 TCGA-G9-7510 
       16.60        17.03        12.82        47.41        36.46        22.16 
TCGA-G9-7521 TCGA-HC-7078 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7744 
       15.98         5.33         1.97         1.68         2.37         1.68 
TCGA-HC-7747 TCGA-HI-7168 TCGA-HI-7171 
        1.87        65.92        66.02 

$`DEL PEAK 22(17P13.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5763 TCGA-CH-5765 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       12.00        23.01        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5792 TCGA-EJ-5494 TCGA-EJ-5495 
       15.95        26.96         9.96         2.99        12.43        19.89 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5509 
       17.42         7.53        14.70        11.70        29.82        36.03 
TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 
       24.23        25.91        25.71        34.88        25.74        27.91 
TCGA-EJ-5518 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
       39.29        41.82        23.80        29.92        17.06        26.99 
TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7317 TCGA-EJ-7327 TCGA-EJ-7330 
       48.99        61.15         9.70         9.37         5.75         6.28 
TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 
        0.30         2.10         4.31         5.49         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 
        1.71         2.30         7.13        17.29         1.41         9.34 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 
       18.21        37.61        39.95        27.85        32.88        33.14 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       27.02        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6378 TCGA-G9-6385 TCGA-G9-6496 
       27.98        26.50        27.81        21.83        11.70        33.34 
TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7077 
       15.02        14.83        10.65        16.83         1.02        65.98 
TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        2.93         2.01         0.99         0.99         2.07         1.74 
TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7169 TCGA-HI-7170 TCGA-J4-8198 
        2.01         1.12        64.08        62.43         3.22 

  DEL PEAK 22(17P13.1) MUTATED DEL PEAK 22(17P13.1) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 22(17P13.1) MUTATED DEL PEAK 22(17P13.1) WILD-TYPE 
                         66.02                          65.98 
  DEL PEAK 22(17P13.1) MUTATED DEL PEAK 22(17P13.1) WILD-TYPE 
                         16.60                          16.83 
[1] "0.9 - 66.0 (16.6)" "0.3 - 66.0 (16.8)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HC-7747                     TCGA-HC-7749 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HC-7747                     TCGA-HC-7749 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
  "DEL PEAK 22(17P13.1) MUTATED"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HC-7747                     TCGA-HC-7749 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 22(17P13.1) WILD-TYPE"   "DEL PEAK 22(17P13.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 22(17P13.1) WILD-TYPE" "DEL PEAK 22(17P13.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 22(17P13.1) MUTATED" "DEL PEAK 22(17P13.1) WILD-TYPE" 
[1] "hr=" "1"  
D38V2, continuous
D38V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 22(17P13.1) MUTATED      1   38
  DEL PEAK 22(17P13.1) WILD-TYPE    4  103
     clus
vv    DEL PEAK 22(17P13.1) MUTATED DEL PEAK 22(17P13.1) WILD-TYPE
  NO                             1                              4
  YES                           38                            103

Clustering(39) Variable = Del Peak 23(17q21.31) mutation analysis
D39V1, survival
                                 sevent
clus2                               0   1
  DEL PEAK 23(17Q21.31) MUTATED    25   1
  DEL PEAK 23(17Q21.31) WILD-TYPE 120   0
  DEL PEAK 23(17Q21.31) MUTATED DEL PEAK 23(17Q21.31) WILD-TYPE 
                             26                             120 
  DEL PEAK 23(17Q21.31) MUTATED DEL PEAK 23(17Q21.31) WILD-TYPE 
                              1                               0 
$`DEL PEAK 23(17Q21.31) MUTATED`
TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5744 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
       22.06         1.02         1.97        12.99        35.01        30.97 
TCGA-CH-5768 TCGA-EJ-5507 TCGA-EJ-5511 TCGA-EJ-5516 TCGA-EJ-5521 TCGA-EJ-5524 
       24.03         5.98        25.91        25.74        27.68        27.42 
TCGA-EJ-5542 TCGA-EJ-7314 TCGA-EJ-7781 TCGA-EJ-7788 TCGA-EJ-7793 TCGA-G9-6348 
       17.06         9.70         5.56         1.71         1.41        37.61 
TCGA-G9-6377 TCGA-G9-6499 TCGA-HC-7077 TCGA-HC-7213 TCGA-HC-7744 TCGA-HI-7168 
       17.03        36.46        65.98         1.97         1.68        65.92 
TCGA-HI-7171 TCGA-J4-8198 
       66.02         3.22 

$`DEL PEAK 23(17Q21.31) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5746 TCGA-CH-5748 
        2.99         6.97        12.99        13.94        24.03         1.02 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
       23.01         1.02        15.06         2.04        12.99        15.95 
TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 
       26.96         9.96        32.02        33.01         2.99        28.96 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 
       12.43        19.89        19.53        13.02        17.62        17.49 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       23.97         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 
       29.82        36.03        24.23        25.71        23.80        34.88 
TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5525 TCGA-EJ-5526 
       27.91        39.29        37.91        46.13        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 
       13.05        41.82        23.80        29.92        26.99        48.99 
TCGA-EJ-7125 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
       61.15         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        6.28         0.30         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7794 TCGA-EJ-7797 
        2.60         2.30         7.13        17.29         9.34         6.15 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 
       43.99        18.21        39.95        27.85        32.88        33.14 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       27.02        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6378 TCGA-G9-6384 
       27.98        26.50        27.81        16.60        21.83        12.82 
TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 
       11.70        47.41        33.34        22.16        15.02        15.98 
TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7078 TCGA-HC-7079 
       14.83        10.65        16.83         1.02         5.33         2.93 
TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 
        2.01         0.99         1.68         2.37         0.99         2.07 
TCGA-HC-7740 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7169 TCGA-HI-7170 
        1.74         1.87         2.01         1.12        64.08        62.43 

  DEL PEAK 23(17Q21.31) MUTATED DEL PEAK 23(17Q21.31) WILD-TYPE 
                           1.02                            0.30 
  DEL PEAK 23(17Q21.31) MUTATED DEL PEAK 23(17Q21.31) WILD-TYPE 
                          66.02                           65.92 
  DEL PEAK 23(17Q21.31) MUTATED DEL PEAK 23(17Q21.31) WILD-TYPE 
                         19.560                          15.965 
[1] "1.0 - 66.0 (19.6)" "0.3 - 65.9 (16.0)"
                     TCGA-CH-5737                      TCGA-CH-5738 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
  "DEL PEAK 23(17Q21.31) MUTATED"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "DEL PEAK 23(17Q21.31) MUTATED"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-FC-7708 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7077                      TCGA-HC-7078 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7079                      TCGA-HC-7080 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7213 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-HC-7230                      TCGA-HC-7231 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7736                      TCGA-HC-7737 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7740                      TCGA-HC-7744 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7749 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7750                      TCGA-HI-7168 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 23(17Q21.31) MUTATED"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5737                      TCGA-CH-5738 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
  "DEL PEAK 23(17Q21.31) MUTATED"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "DEL PEAK 23(17Q21.31) MUTATED"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-FC-7708 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7077                      TCGA-HC-7078 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7079                      TCGA-HC-7080 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7213 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-HC-7230                      TCGA-HC-7231 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7736                      TCGA-HC-7737 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7740                      TCGA-HC-7744 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7749 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7750                      TCGA-HI-7168 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 23(17Q21.31) MUTATED"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5737                      TCGA-CH-5738 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
  "DEL PEAK 23(17Q21.31) MUTATED"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "DEL PEAK 23(17Q21.31) MUTATED"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-FC-7708 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7077                      TCGA-HC-7078 
  "DEL PEAK 23(17Q21.31) MUTATED" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7079                      TCGA-HC-7080 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7213 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-HC-7230                      TCGA-HC-7231 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7736                      TCGA-HC-7737 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7740                      TCGA-HC-7744 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7749 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7750                      TCGA-HI-7168 
"DEL PEAK 23(17Q21.31) WILD-TYPE"   "DEL PEAK 23(17Q21.31) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 23(17Q21.31) WILD-TYPE" "DEL PEAK 23(17Q21.31) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 23(17Q21.31) MUTATED"   "DEL PEAK 23(17Q21.31) MUTATED" 
[1] "hr=" "1"  
D39V2, continuous
D39V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 23(17Q21.31) MUTATED      1   25
  DEL PEAK 23(17Q21.31) WILD-TYPE    4  116
     clus
vv    DEL PEAK 23(17Q21.31) MUTATED DEL PEAK 23(17Q21.31) WILD-TYPE
  NO                              1                               4
  YES                            25                             116

Clustering(40) Variable = Del Peak 24(18q22.1) mutation analysis
D40V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 24(18Q22.1) MUTATED    36   1
  DEL PEAK 24(18Q22.1) WILD-TYPE 109   0
  DEL PEAK 24(18Q22.1) MUTATED DEL PEAK 24(18Q22.1) WILD-TYPE 
                            37                            109 
  DEL PEAK 24(18Q22.1) MUTATED DEL PEAK 24(18Q22.1) WILD-TYPE 
                             1                              0 
$`DEL PEAK 24(18Q22.1) MUTATED`
TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5769 TCGA-CH-5772 TCGA-CH-5791 TCGA-EJ-5504 
        2.04         0.92         2.04        15.95        33.01         7.53 
TCGA-EJ-5507 TCGA-EJ-5511 TCGA-EJ-5514 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5524 
        5.98        25.91        23.80        27.91        39.29        27.42 
TCGA-EJ-5525 TCGA-EJ-5527 TCGA-EJ-7315 TCGA-EJ-7781 TCGA-EJ-7789 TCGA-EJ-7794 
       25.97        13.05         9.50         5.56         2.30         9.34 
TCGA-G9-6329 TCGA-G9-6342 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6373 TCGA-G9-6377 
       30.35        43.99        37.61        39.95        16.60        17.03 
TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-7521 TCGA-G9-7523 TCGA-HC-7077 TCGA-HC-7078 
       21.83        12.82        15.98        10.65        65.98         5.33 
TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7749 TCGA-HI-7168 TCGA-HI-7170 
        0.99         1.97         1.68         2.01        65.92        62.43 
TCGA-HI-7171 
       66.02 

$`DEL PEAK 24(18Q22.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 
        1.02        44.02        12.00         1.02        23.01         1.02 
TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 
       15.06        24.03        12.99        26.96         9.96        32.02 
TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 
        2.99        28.96        12.43        19.89        19.53        13.02 
TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 
       17.62        17.49        23.97         8.02        17.42        14.70 
TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5512 TCGA-EJ-5515 
       11.70        29.82        36.03        24.23        25.71        34.88 
TCGA-EJ-5516 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5526 TCGA-EJ-5530 
       25.74        37.91        27.68        46.13        18.64        41.82 
TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       23.80        29.92        17.06        26.99        48.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.70         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 
        0.30         2.10         4.31         5.49         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7797 TCGA-FC-7708 
        1.71         7.13        17.29         1.41         6.15         1.05 
TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6343 TCGA-G9-6353 
       65.92        63.29        54.87        54.21        18.21        27.85 
TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 
       32.88        33.14        27.02        32.65        27.65        26.43 
TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6385 
        3.32        28.77        27.98        26.50        27.81        11.70 
TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7522 
       47.41        33.34        36.46        22.16        15.02        14.83 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7231 TCGA-HC-7736 
       16.83         1.02         2.93         2.01         2.37         0.99 
TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7750 TCGA-HI-7169 
        2.07         1.74         1.68         1.87         1.12        64.08 
TCGA-J4-8198 
        3.22 

  DEL PEAK 24(18Q22.1) MUTATED DEL PEAK 24(18Q22.1) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 24(18Q22.1) MUTATED DEL PEAK 24(18Q22.1) WILD-TYPE 
                         66.02                          65.92 
  DEL PEAK 24(18Q22.1) MUTATED DEL PEAK 24(18Q22.1) WILD-TYPE 
                         15.98                          17.06 
[1] "0.9 - 66.0 (16.0)" "0.3 - 65.9 (17.1)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "DEL PEAK 24(18Q22.1) MUTATED"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-6351                     TCGA-G9-6353 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 24(18Q22.1) MUTATED"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
  "DEL PEAK 24(18Q22.1) MUTATED"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
  "DEL PEAK 24(18Q22.1) MUTATED"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "DEL PEAK 24(18Q22.1) MUTATED"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-6351                     TCGA-G9-6353 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 24(18Q22.1) MUTATED"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
  "DEL PEAK 24(18Q22.1) MUTATED"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
  "DEL PEAK 24(18Q22.1) MUTATED"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "DEL PEAK 24(18Q22.1) MUTATED"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-6351                     TCGA-G9-6353 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 24(18Q22.1) MUTATED"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
  "DEL PEAK 24(18Q22.1) MUTATED"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
  "DEL PEAK 24(18Q22.1) MUTATED"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 24(18Q22.1) WILD-TYPE" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 24(18Q22.1) WILD-TYPE"   "DEL PEAK 24(18Q22.1) MUTATED" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 24(18Q22.1) MUTATED" "DEL PEAK 24(18Q22.1) WILD-TYPE" 
[1] "hr=" "1"  
D40V2, continuous
D40V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 24(18Q22.1) MUTATED      1   36
  DEL PEAK 24(18Q22.1) WILD-TYPE    4  105
     clus
vv    DEL PEAK 24(18Q22.1) MUTATED DEL PEAK 24(18Q22.1) WILD-TYPE
  NO                             1                              4
  YES                           36                            105

Clustering(41) Variable = Del Peak 25(18q23) mutation analysis
D41V1, survival
                              sevent
clus2                            0   1
  DEL PEAK 25(18Q23) MUTATED    42   1
  DEL PEAK 25(18Q23) WILD-TYPE 103   0
  DEL PEAK 25(18Q23) MUTATED DEL PEAK 25(18Q23) WILD-TYPE 
                          43                          103 
  DEL PEAK 25(18Q23) MUTATED DEL PEAK 25(18Q23) WILD-TYPE 
                           1                            0 
$`DEL PEAK 25(18Q23) MUTATED`
TCGA-CH-5740 TCGA-CH-5744 TCGA-CH-5751 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 
        1.02         1.97        35.01         1.02         2.04         0.92 
TCGA-CH-5762 TCGA-CH-5768 TCGA-CH-5772 TCGA-CH-5791 TCGA-EJ-5495 TCGA-EJ-5504 
       44.02        24.03        15.95        33.01        19.89         7.53 
TCGA-EJ-5507 TCGA-EJ-5511 TCGA-EJ-5514 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5524 
        5.98        25.91        23.80        27.91        39.29        27.42 
TCGA-EJ-5525 TCGA-EJ-5527 TCGA-EJ-7315 TCGA-EJ-7781 TCGA-EJ-7794 TCGA-G9-6329 
       25.97        13.05         9.50         5.56         9.34        30.35 
TCGA-G9-6342 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       43.99        37.61        39.95        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6499 TCGA-G9-7521 TCGA-G9-7523 TCGA-HC-7077 TCGA-HC-7078 
       12.82        36.46        15.98        10.65        65.98         5.33 
TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7749 TCGA-HI-7168 TCGA-HI-7170 
        0.99         1.97         1.68         2.01        65.92        62.43 
TCGA-HI-7171 
       66.02 

$`DEL PEAK 25(18Q23) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5746 
        2.99         6.97        22.06        12.99        13.94        24.03 
TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 
        1.02        12.99        30.97        12.00         1.02        23.01 
TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5788 TCGA-CH-5789 
        1.02        15.06         2.04        12.99        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5496 TCGA-EJ-5497 
       32.02         2.99        28.96        12.43        19.53        13.02 
TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 
       17.62        17.49        23.97         8.02        17.42        14.70 
TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5512 TCGA-EJ-5515 
       11.70        29.82        36.03        24.23        25.71        34.88 
TCGA-EJ-5516 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5526 TCGA-EJ-5530 
       25.74        37.91        27.68        46.13        18.64        41.82 
TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       23.80        29.92        17.06        26.99        48.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.70         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 
        0.30         2.10         4.31         5.49         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7797 
        1.71         2.30         7.13        17.29         1.41         6.15 
TCGA-FC-7708 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6343 
        1.05        65.92        63.29        54.87        54.21        18.21 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7522 
       11.70        47.41        33.34        22.16        15.02        14.83 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7231 TCGA-HC-7736 
       16.83         1.02         2.93         2.01         2.37         0.99 
TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7750 TCGA-HI-7169 
        2.07         1.74         1.68         1.87         1.12        64.08 
TCGA-J4-8198 
        3.22 

  DEL PEAK 25(18Q23) MUTATED DEL PEAK 25(18Q23) WILD-TYPE 
                        0.92                         0.30 
  DEL PEAK 25(18Q23) MUTATED DEL PEAK 25(18Q23) WILD-TYPE 
                       66.02                        65.92 
  DEL PEAK 25(18Q23) MUTATED DEL PEAK 25(18Q23) WILD-TYPE 
                       17.03                        15.06 
[1] "0.9 - 66.0 (17.0)" "0.3 - 65.9 (15.1)"
                  TCGA-CH-5737                   TCGA-CH-5738 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5739                   TCGA-CH-5740 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-CH-5741                   TCGA-CH-5743 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5744                   TCGA-CH-5746 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5748                   TCGA-CH-5750 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5751                   TCGA-CH-5752 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5753                   TCGA-CH-5754 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-CH-5761                   TCGA-CH-5762 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-CH-5763                   TCGA-CH-5764 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5765                   TCGA-CH-5766 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5767                   TCGA-CH-5768 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-CH-5769                   TCGA-CH-5771 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5772                   TCGA-CH-5788 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5789                   TCGA-CH-5790 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5791                   TCGA-CH-5792 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5794                   TCGA-EJ-5494 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5495                   TCGA-EJ-5496 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5497                   TCGA-EJ-5498 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5499                   TCGA-EJ-5501 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5502                   TCGA-EJ-5503 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5504                   TCGA-EJ-5505 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5506                   TCGA-EJ-5507 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5508                   TCGA-EJ-5509 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5510                   TCGA-EJ-5511 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5512                   TCGA-EJ-5514 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5515                   TCGA-EJ-5516 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5517                   TCGA-EJ-5518 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5519                   TCGA-EJ-5521 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5522                   TCGA-EJ-5524 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5525                   TCGA-EJ-5526 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5527                   TCGA-EJ-5530 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5531                   TCGA-EJ-5532 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5542                   TCGA-EJ-7115 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7123                   TCGA-EJ-7125 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7314                   TCGA-EJ-7315 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-7317                   TCGA-EJ-7321 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7327                   TCGA-EJ-7328 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7330                   TCGA-EJ-7331 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7781                   TCGA-EJ-7782 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7783                   TCGA-EJ-7784 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7785                   TCGA-EJ-7786 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7788                   TCGA-EJ-7789 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7791                   TCGA-EJ-7792 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7793                   TCGA-EJ-7794 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-7797                   TCGA-FC-7708 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6329                   TCGA-G9-6332 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6333                   TCGA-G9-6336 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6338                   TCGA-G9-6342 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-6343                   TCGA-G9-6348 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-6351                   TCGA-G9-6353 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6356                   TCGA-G9-6361 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6362                   TCGA-G9-6363 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6364                   TCGA-G9-6365 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6366                   TCGA-G9-6367 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6369                   TCGA-G9-6370 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6371                   TCGA-G9-6373 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-6377                   TCGA-G9-6378 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-6384                   TCGA-G9-6385 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6494                   TCGA-G9-6496 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6499                   TCGA-G9-7510 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-7519                   TCGA-G9-7521 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-7522                   TCGA-G9-7523 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-7525                   TCGA-H9-7775 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7077                   TCGA-HC-7078 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HC-7079                   TCGA-HC-7080 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7211                   TCGA-HC-7213 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HC-7230                   TCGA-HC-7231 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7736                   TCGA-HC-7737 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7740                   TCGA-HC-7744 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7747                   TCGA-HC-7749 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HC-7750                   TCGA-HI-7168 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HI-7169                   TCGA-HI-7170 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HI-7171                   TCGA-J4-8198 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5737                   TCGA-CH-5738 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5739                   TCGA-CH-5740 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-CH-5741                   TCGA-CH-5743 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5744                   TCGA-CH-5746 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5748                   TCGA-CH-5750 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5751                   TCGA-CH-5752 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5753                   TCGA-CH-5754 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-CH-5761                   TCGA-CH-5762 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-CH-5763                   TCGA-CH-5764 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5765                   TCGA-CH-5766 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5767                   TCGA-CH-5768 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-CH-5769                   TCGA-CH-5771 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5772                   TCGA-CH-5788 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5789                   TCGA-CH-5790 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5791                   TCGA-CH-5792 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5794                   TCGA-EJ-5494 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5495                   TCGA-EJ-5496 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5497                   TCGA-EJ-5498 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5499                   TCGA-EJ-5501 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5502                   TCGA-EJ-5503 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5504                   TCGA-EJ-5505 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5506                   TCGA-EJ-5507 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5508                   TCGA-EJ-5509 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5510                   TCGA-EJ-5511 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5512                   TCGA-EJ-5514 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5515                   TCGA-EJ-5516 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5517                   TCGA-EJ-5518 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5519                   TCGA-EJ-5521 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5522                   TCGA-EJ-5524 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5525                   TCGA-EJ-5526 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5527                   TCGA-EJ-5530 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5531                   TCGA-EJ-5532 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5542                   TCGA-EJ-7115 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7123                   TCGA-EJ-7125 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7314                   TCGA-EJ-7315 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-7317                   TCGA-EJ-7321 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7327                   TCGA-EJ-7328 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7330                   TCGA-EJ-7331 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7781                   TCGA-EJ-7782 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7783                   TCGA-EJ-7784 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7785                   TCGA-EJ-7786 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7788                   TCGA-EJ-7789 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7791                   TCGA-EJ-7792 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7793                   TCGA-EJ-7794 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-7797                   TCGA-FC-7708 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6329                   TCGA-G9-6332 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6333                   TCGA-G9-6336 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6338                   TCGA-G9-6342 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-6343                   TCGA-G9-6348 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-6351                   TCGA-G9-6353 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6356                   TCGA-G9-6361 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6362                   TCGA-G9-6363 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6364                   TCGA-G9-6365 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6366                   TCGA-G9-6367 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6369                   TCGA-G9-6370 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6371                   TCGA-G9-6373 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-6377                   TCGA-G9-6378 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-6384                   TCGA-G9-6385 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6494                   TCGA-G9-6496 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6499                   TCGA-G9-7510 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-7519                   TCGA-G9-7521 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-7522                   TCGA-G9-7523 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-7525                   TCGA-H9-7775 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7077                   TCGA-HC-7078 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HC-7079                   TCGA-HC-7080 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7211                   TCGA-HC-7213 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HC-7230                   TCGA-HC-7231 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7736                   TCGA-HC-7737 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7740                   TCGA-HC-7744 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7747                   TCGA-HC-7749 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HC-7750                   TCGA-HI-7168 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HI-7169                   TCGA-HI-7170 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HI-7171                   TCGA-J4-8198 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5737                   TCGA-CH-5738 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5739                   TCGA-CH-5740 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-CH-5741                   TCGA-CH-5743 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5744                   TCGA-CH-5746 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5748                   TCGA-CH-5750 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5751                   TCGA-CH-5752 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5753                   TCGA-CH-5754 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-CH-5761                   TCGA-CH-5762 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-CH-5763                   TCGA-CH-5764 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5765                   TCGA-CH-5766 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5767                   TCGA-CH-5768 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-CH-5769                   TCGA-CH-5771 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5772                   TCGA-CH-5788 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5789                   TCGA-CH-5790 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5791                   TCGA-CH-5792 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-CH-5794                   TCGA-EJ-5494 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5495                   TCGA-EJ-5496 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5497                   TCGA-EJ-5498 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5499                   TCGA-EJ-5501 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5502                   TCGA-EJ-5503 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5504                   TCGA-EJ-5505 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5506                   TCGA-EJ-5507 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5508                   TCGA-EJ-5509 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5510                   TCGA-EJ-5511 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5512                   TCGA-EJ-5514 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5515                   TCGA-EJ-5516 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5517                   TCGA-EJ-5518 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5519                   TCGA-EJ-5521 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5522                   TCGA-EJ-5524 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-5525                   TCGA-EJ-5526 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5527                   TCGA-EJ-5530 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5531                   TCGA-EJ-5532 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-5542                   TCGA-EJ-7115 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7123                   TCGA-EJ-7125 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7314                   TCGA-EJ-7315 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-7317                   TCGA-EJ-7321 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7327                   TCGA-EJ-7328 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7330                   TCGA-EJ-7331 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7781                   TCGA-EJ-7782 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7783                   TCGA-EJ-7784 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7785                   TCGA-EJ-7786 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7788                   TCGA-EJ-7789 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7791                   TCGA-EJ-7792 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-EJ-7793                   TCGA-EJ-7794 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-EJ-7797                   TCGA-FC-7708 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6329                   TCGA-G9-6332 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6333                   TCGA-G9-6336 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6338                   TCGA-G9-6342 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-6343                   TCGA-G9-6348 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-6351                   TCGA-G9-6353 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6356                   TCGA-G9-6361 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6362                   TCGA-G9-6363 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6364                   TCGA-G9-6365 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6366                   TCGA-G9-6367 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6369                   TCGA-G9-6370 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6371                   TCGA-G9-6373 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-6377                   TCGA-G9-6378 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-6384                   TCGA-G9-6385 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6494                   TCGA-G9-6496 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-6499                   TCGA-G9-7510 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-G9-7519                   TCGA-G9-7521 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-7522                   TCGA-G9-7523 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-G9-7525                   TCGA-H9-7775 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7077                   TCGA-HC-7078 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HC-7079                   TCGA-HC-7080 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7211                   TCGA-HC-7213 
  "DEL PEAK 25(18Q23) MUTATED"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HC-7230                   TCGA-HC-7231 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7736                   TCGA-HC-7737 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7740                   TCGA-HC-7744 
"DEL PEAK 25(18Q23) WILD-TYPE" "DEL PEAK 25(18Q23) WILD-TYPE" 
                  TCGA-HC-7747                   TCGA-HC-7749 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HC-7750                   TCGA-HI-7168 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HI-7169                   TCGA-HI-7170 
"DEL PEAK 25(18Q23) WILD-TYPE"   "DEL PEAK 25(18Q23) MUTATED" 
                  TCGA-HI-7171                   TCGA-J4-8198 
  "DEL PEAK 25(18Q23) MUTATED" "DEL PEAK 25(18Q23) WILD-TYPE" 
[1] "hr=" "1"  
D41V2, continuous
D41V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 25(18Q23) MUTATED      2   41
  DEL PEAK 25(18Q23) WILD-TYPE    3  100
     clus
vv    DEL PEAK 25(18Q23) MUTATED DEL PEAK 25(18Q23) WILD-TYPE
  NO                           2                            3
  YES                         41                          100

Clustering(42) Variable = Del Peak 26(21q22.2) mutation analysis
D42V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 26(21Q22.2) MUTATED   48  0
  DEL PEAK 26(21Q22.2) WILD-TYPE 97  1
  DEL PEAK 26(21Q22.2) MUTATED DEL PEAK 26(21Q22.2) WILD-TYPE 
                            48                             98 
  DEL PEAK 26(21Q22.2) MUTATED DEL PEAK 26(21Q22.2) WILD-TYPE 
                             0                              1 
$`DEL PEAK 26(21Q22.2) MUTATED`
TCGA-CH-5741 TCGA-CH-5746 TCGA-CH-5752 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 
       12.99        24.03        30.97         1.02         2.04         0.92 
TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5790 TCGA-CH-5791 
        1.02        23.01        24.03         2.04        32.02        33.01 
TCGA-CH-5794 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5499 TCGA-EJ-5508 
       28.96        19.89        19.53        13.02        17.49        29.82 
TCGA-EJ-5512 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5526 
       25.71        37.91        27.68        46.13        27.42        18.64 
TCGA-EJ-5542 TCGA-EJ-7315 TCGA-EJ-7321 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
       17.06         9.50         7.66         4.31         5.49         8.48 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6336 TCGA-G9-6342 TCGA-G9-6362 TCGA-G9-6363 
        1.05        30.35        54.87        43.99        27.02        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-7521 TCGA-G9-7522 
       27.65        26.43        16.60        17.03        15.98        14.83 
TCGA-G9-7525 TCGA-HC-7077 TCGA-HC-7213 TCGA-HC-7231 TCGA-HC-7744 TCGA-HI-7169 
       16.83        65.98         1.97         2.37         1.68        64.08 

$`DEL PEAK 26(21Q22.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5743 TCGA-CH-5744 
        2.99         6.97        22.06         1.02        13.94         1.97 
TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5766 
        1.02        12.99        35.01        44.02        12.00         1.02 
TCGA-CH-5767 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5792 
       15.06        12.99        15.95        26.96         9.96         2.99 
TCGA-EJ-5494 TCGA-EJ-5498 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 
       12.43        17.62        23.97         8.02        17.42         7.53 
TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       14.70        11.70         5.98        36.03        24.23        25.91 
TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5525 
       23.80        34.88        25.74        27.91        39.29        25.97 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 
       13.05        41.82        23.80        29.92        26.99        48.99 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7317 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
       61.15         9.70         9.37         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 
        0.30         5.56         2.10         2.60         1.71         2.30 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-G9-6332 
        7.13        17.29         1.41         9.34         6.15        65.92 
TCGA-G9-6333 TCGA-G9-6338 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 
       63.29        54.21        18.21        37.61        39.95        27.85 
TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       32.88        33.14         3.32        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 
       27.81        21.83        12.82        11.70        47.41        33.34 
TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7523 TCGA-H9-7775 TCGA-HC-7078 
       36.46        22.16        15.02        10.65         1.02         5.33 
TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7736 TCGA-HC-7737 
        2.93         2.01         0.99         1.68         0.99         2.07 
TCGA-HC-7740 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HI-7168 TCGA-HI-7170 
        1.74         1.87         2.01         1.12        65.92        62.43 
TCGA-HI-7171 TCGA-J4-8198 
       66.02         3.22 

  DEL PEAK 26(21Q22.2) MUTATED DEL PEAK 26(21Q22.2) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 26(21Q22.2) MUTATED DEL PEAK 26(21Q22.2) WILD-TYPE 
                         65.98                          66.02 
  DEL PEAK 26(21Q22.2) MUTATED DEL PEAK 26(21Q22.2) WILD-TYPE 
                        19.085                         13.495 
[1] "0.9 - 66.0 (19.1)" "0.3 - 66.0 (13.5)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 26(21Q22.2) MUTATED"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 26(21Q22.2) WILD-TYPE"   "DEL PEAK 26(21Q22.2) MUTATED" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
  "DEL PEAK 26(21Q22.2) MUTATED" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 26(21Q22.2) WILD-TYPE" "DEL PEAK 26(21Q22.2) WILD-TYPE" 
[1] "hr=" "1"  
D42V2, continuous
D42V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 26(21Q22.2) MUTATED      3   45
  DEL PEAK 26(21Q22.2) WILD-TYPE    2   96
     clus
vv    DEL PEAK 26(21Q22.2) MUTATED DEL PEAK 26(21Q22.2) WILD-TYPE
  NO                             3                              2
  YES                           45                             96

Clustering(43) Variable = Del Peak 27(21q22.3) mutation analysis
D43V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 27(21Q22.3) MUTATED   46  0
  DEL PEAK 27(21Q22.3) WILD-TYPE 99  1
  DEL PEAK 27(21Q22.3) MUTATED DEL PEAK 27(21Q22.3) WILD-TYPE 
                            46                            100 
  DEL PEAK 27(21Q22.3) MUTATED DEL PEAK 27(21Q22.3) WILD-TYPE 
                             0                              1 
$`DEL PEAK 27(21Q22.3) MUTATED`
TCGA-CH-5741 TCGA-CH-5746 TCGA-CH-5752 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 
       12.99        24.03        30.97         1.02         2.04         0.92 
TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5790 TCGA-CH-5791 
        1.02        23.01        24.03         2.04        32.02        33.01 
TCGA-CH-5794 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5499 TCGA-EJ-5508 
       28.96        19.89        19.53        13.02        17.49        29.82 
TCGA-EJ-5512 TCGA-EJ-5516 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 
       25.71        25.74        37.91        27.68        46.13        27.42 
TCGA-EJ-5526 TCGA-EJ-5542 TCGA-EJ-7315 TCGA-EJ-7321 TCGA-EJ-7783 TCGA-EJ-7784 
       18.64        17.06         9.50         7.66         4.31         5.49 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6336 TCGA-G9-6342 TCGA-G9-6362 TCGA-G9-6363 
        1.05        30.35        54.87        43.99        27.02        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-7521 
       27.65        26.43        27.81        16.60        17.03        15.98 
TCGA-G9-7525 TCGA-HC-7213 TCGA-HC-7231 TCGA-J4-8198 
       16.83         1.97         2.37         3.22 

$`DEL PEAK 27(21Q22.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5743 TCGA-CH-5744 
        2.99         6.97        22.06         1.02        13.94         1.97 
TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5766 
        1.02        12.99        35.01        44.02        12.00         1.02 
TCGA-CH-5767 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5792 
       15.06        12.99        15.95        26.96         9.96         2.99 
TCGA-EJ-5494 TCGA-EJ-5498 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 
       12.43        17.62        23.97         8.02        17.42         7.53 
TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       14.70        11.70         5.98        36.03        24.23        25.91 
TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5525 TCGA-EJ-5527 
       23.80        34.88        27.91        39.29        25.97        13.05 
TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       41.82        23.80        29.92        26.99        48.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7317 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 
        9.70         9.37         5.75         5.59         6.28         0.30 
TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 
        5.56         2.10         8.48         2.60         1.71         2.30 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-G9-6332 
        7.13        17.29         1.41         9.34         6.15        65.92 
TCGA-G9-6333 TCGA-G9-6338 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 
       63.29        54.21        18.21        37.61        39.95        27.85 
TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       32.88        33.14         3.32        28.77        27.98        26.50 
TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 
       21.83        12.82        11.70        47.41        33.34        36.46 
TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7523 TCGA-H9-7775 TCGA-HC-7077 
       22.16        15.02        14.83        10.65         1.02        65.98 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7736 
        5.33         2.93         2.01         0.99         1.68         0.99 
TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 
        2.07         1.74         1.68         1.87         2.01         1.12 
TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
       65.92        64.08        62.43        66.02 

  DEL PEAK 27(21Q22.3) MUTATED DEL PEAK 27(21Q22.3) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 27(21Q22.3) MUTATED DEL PEAK 27(21Q22.3) WILD-TYPE 
                         54.87                          66.02 
  DEL PEAK 27(21Q22.3) MUTATED DEL PEAK 27(21Q22.3) WILD-TYPE 
                        19.710                         13.495 
[1] "0.9 - 54.9 (19.7)" "0.3 - 66.0 (13.5)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-FC-7708 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
  "DEL PEAK 27(21Q22.3) MUTATED"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 27(21Q22.3) MUTATED" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7077                     TCGA-HC-7078 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7079                     TCGA-HC-7080 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7213 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-HC-7230                     TCGA-HC-7231 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
                    TCGA-HC-7736                     TCGA-HC-7737 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7740                     TCGA-HC-7744 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7749 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7750                     TCGA-HI-7168 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 27(21Q22.3) WILD-TYPE" "DEL PEAK 27(21Q22.3) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 27(21Q22.3) WILD-TYPE"   "DEL PEAK 27(21Q22.3) MUTATED" 
[1] "hr=" "1"  
D43V2, continuous
D43V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 27(21Q22.3) MUTATED      3   43
  DEL PEAK 27(21Q22.3) WILD-TYPE    2   98
     clus
vv    DEL PEAK 27(21Q22.3) MUTATED DEL PEAK 27(21Q22.3) WILD-TYPE
  NO                             3                              2
  YES                           43                             98
                                    V1.D 
                         "Time to Death" 
                                      V2 
                                   "AGE" 
                                      V3 
"RADIATIONS.RADIATION.REGIMENINDICATION" 
> q(save="no")
