Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.silfig.png	MolecularSubtypes-Expression_mRNA	Level_4	png	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.geneheatmaptopgenes.png	MolecularSubtypes-Expression_mRNA	Level_4	png	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.geneheatmap.png	MolecularSubtypes-Expression_mRNA	Level_4	png	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.cormatrix.png	MolecularSubtypes-Expression_mRNA	Level_4	png	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.bestclus.txt	MolecularSubtypes-Expression_mRNA	Level_4	text	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.allclusters.txt	MolecularSubtypes-Expression_mRNA	Level_4	text	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.subclassmarkers.txt	MolecularSubtypes-Expression_mRNA	Level_4	text	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.2.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.7.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.8.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.5.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.2.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.7.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.6.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.6.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.4.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.3.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.8.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.4.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.5.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.3.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.6.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.8.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.2.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.5.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.4.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.3.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.7.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_TopgenesforCluster1.expfile	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.silfig.png	MolecularSubtypes-Expression_mRNA	Level_4	png	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.geneheatmaptopgenes.png	MolecularSubtypes-Expression_mRNA	Level_4	png	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.geneheatmap.png	MolecularSubtypes-Expression_mRNA	Level_4	png	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.cormatrix.png	MolecularSubtypes-Expression_mRNA	Level_4	png	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.bestclus.txt	MolecularSubtypes-Expression_mRNA	Level_4	text	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.allclusters.txt	MolecularSubtypes-Expression_mRNA	Level_4	text	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	SKCM-TM.subclassmarkers.txt	MolecularSubtypes-Expression_mRNA	Level_4	text	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.2.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.7.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.8.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.5.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.2.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.7.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.6.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.6.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.4.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.3.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.8.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.4.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.5.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.3.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.gct	ClusteringInput-Expression_mRNA	Level_4	gct	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.6.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.8.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.2.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.5.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.4.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.3.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	outputprefix.expclu.sub185.srt.7.gif	MolecularSubtypes-Expression_mRNA	Level_4	gif	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
GDAC_selectBestcluster3.inputallexp	SKCM-TM.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Preprocess.Level_4.2013022200.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00445:30	mRNAseq_Clustering_Consensus_2013022200	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_SKCM-TM.mRNAseq_Clustering_Consensus.Level_4.2013022200.0.0	yes
