| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/THCA-TP/2666991/3.GDAC_CNMFselectcluster.Finished/THCA-TP.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/THCA-TP/2666810/3.GDAC_CNMFselectcluster.Finished/THCA-TP.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | THCA-TP |
| GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/THCA-TP/2666576/3.GDAC_CNMFselectcluster.Finished/THCA-TP.bestclus.txt |
| GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/THCA-TP/2666572/3.GDAC_selectBestcluster.Finished/THCA-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/THCA-TP/2666570/3.GDAC_CNMFselectcluster.Finished/THCA-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/THCA-TP/2666571/3.GDAC_selectBestcluster.Finished/THCA-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/THCA-TP/2666673/3.GDAC_CNMFselectcluster.Finished/THCA-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/THCA-TP/2666672/3.GDAC_selectBestcluster.Finished/THCA-TP.bestclus.txt |
| Execution Times: | |
| Submitted: | 00:09:09 05-03-13 |
| Completed: | |
| Elapsed: | 00 hrs 00 mins 54 secs |
step 1. GDAC_mergedClustering [id: 335704] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | |
| mrnahc | |
| mirnacnmf | |
| mirnahc | |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/THCA-TP/2666991/3.GDAC_CNMFselectcluster.Finished/THCA-TP.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/THCA-TP/2666810/3.GDAC_CNMFselectcluster.Finished/THCA-TP.bestclus.txt |
| mergedfile | THCA-TP |
| PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/THCA-TP/2666576/3.GDAC_CNMFselectcluster.Finished/THCA-TP.bestclus.txt |
| PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/THCA-TP/2666572/3.GDAC_selectBestcluster.Finished/THCA-TP.bestclus.txt |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/THCA-TP/2666570/3.GDAC_CNMFselectcluster.Finished/THCA-TP.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/THCA-TP/2666571/3.GDAC_selectBestcluster.Finished/THCA-TP.bestclus.txt |
| miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/THCA-TP/2666673/3.GDAC_CNMFselectcluster.Finished/THCA-TP.bestclus.txt |
| miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/THCA-TP/2666672/3.GDAC_selectBestcluster.Finished/THCA-TP.bestclus.txt |
| Output Files: | |
| THCA-TP.transferedmergedcluster.txt | |
| THCA-TP.mergedcluster.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 00:09:09 05-03-13 |
| Completed: | 00:09:29 05-03-13 |
| Elapsed: | 00 hrs 00 mins 20 secs |
step 2. GDAC_mergedReport [id: 335705]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | THCA-TP.transferedmergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 00:09:09 05-03-13 |
| Completed: | 00:10:01 05-03-13 |
| Elapsed: | 00 hrs 00 mins 52 secs |