
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_mutation_onlysig.3.4048/Clusters2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_mutation_onlysig.3.4048/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/335716/THCA-TP.mutsig.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/THCA-TP/2667405/1.GDAC_mergedClustering.Finished/THCA-TP.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ONLYSIG", "-oT=THCA-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=THCA-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=435, in cluster file=323, common to both=323
[1] "Reduce the number of clustering variables from 46 to 41."
[1]  41 323
[1] "BRAF MUTATION ANALYSIS"
[1] 3
  BRAF MUTATED BRAF WILD-TYPE 
           183            140 
  BRAF MUTATED BRAF WILD-TYPE 
           183            140 
[1] "EMG1 MUTATION ANALYSIS"
[1] 3
  EMG1 MUTATED EMG1 WILD-TYPE 
             6            317 
  EMG1 MUTATED EMG1 WILD-TYPE 
             6            317 
[1] "HRAS MUTATION ANALYSIS"
[1] 3
  HRAS MUTATED HRAS WILD-TYPE 
            12            311 
  HRAS MUTATED HRAS WILD-TYPE 
            12            311 
[1] "NRAS MUTATION ANALYSIS"
[1] 3
  NRAS MUTATED NRAS WILD-TYPE 
            26            297 
  NRAS MUTATED NRAS WILD-TYPE 
            26            297 
[1] "PTTG1IP MUTATION ANALYSIS"
[1] 3
  PTTG1IP MUTATED PTTG1IP WILD-TYPE 
                4               319 
  PTTG1IP MUTATED PTTG1IP WILD-TYPE 
                4               319 
[1] "RPTN MUTATION ANALYSIS"
[1] 3
  RPTN MUTATED RPTN WILD-TYPE 
             8            315 
  RPTN MUTATED RPTN WILD-TYPE 
             8            315 
[1] "EIF1AX MUTATION ANALYSIS"
[1] 3
  EIF1AX MUTATED EIF1AX WILD-TYPE 
               5              318 
  EIF1AX MUTATED EIF1AX WILD-TYPE 
               5              318 
[1] "CCDC15 MUTATION ANALYSIS"
[1] 3
  CCDC15 MUTATED CCDC15 WILD-TYPE 
               5              318 
  CCDC15 MUTATED CCDC15 WILD-TYPE 
               5              318 
[1] "ZNF845 MUTATION ANALYSIS"
[1] 3
  ZNF845 MUTATED ZNF845 WILD-TYPE 
               6              317 
  ZNF845 MUTATED ZNF845 WILD-TYPE 
               6              317 
[1] "ZNF878 MUTATION ANALYSIS"
[1] 3
  ZNF878 MUTATED ZNF878 WILD-TYPE 
               4              319 
  ZNF878 MUTATED ZNF878 WILD-TYPE 
               4              319 
[1] "TG MUTATION ANALYSIS"
[1] 3
  TG MUTATED TG WILD-TYPE 
          16          307 
  TG MUTATED TG WILD-TYPE 
          16          307 
[1] "PRB2 MUTATION ANALYSIS"
[1] 3
  PRB2 MUTATED PRB2 WILD-TYPE 
             6            317 
  PRB2 MUTATED PRB2 WILD-TYPE 
             6            317 
[1] "R3HDM2 MUTATION ANALYSIS"
[1] 3
  R3HDM2 MUTATED R3HDM2 WILD-TYPE 
               4              319 
  R3HDM2 MUTATED R3HDM2 WILD-TYPE 
               4              319 
[1] "IL32 MUTATION ANALYSIS"
[1] 3
  IL32 MUTATED IL32 WILD-TYPE 
             3            320 
  IL32 MUTATED IL32 WILD-TYPE 
             3            320 
[1] "TMCO2 MUTATION ANALYSIS"
[1] 3
  TMCO2 MUTATED TMCO2 WILD-TYPE 
              3             320 
  TMCO2 MUTATED TMCO2 WILD-TYPE 
              3             320 
[1] "PPTC7 MUTATION ANALYSIS"
[1] 3
  PPTC7 MUTATED PPTC7 WILD-TYPE 
              3             320 
  PPTC7 MUTATED PPTC7 WILD-TYPE 
              3             320 
[1] "MUC7 MUTATION ANALYSIS"
[1] 3
  MUC7 MUTATED MUC7 WILD-TYPE 
             5            318 
  MUC7 MUTATED MUC7 WILD-TYPE 
             5            318 
[1] "LYPD3 MUTATION ANALYSIS"
[1] 3
  LYPD3 MUTATED LYPD3 WILD-TYPE 
              3             320 
  LYPD3 MUTATED LYPD3 WILD-TYPE 
              3             320 
[1] "TMEM90B MUTATION ANALYSIS"
[1] 3
  TMEM90B MUTATED TMEM90B WILD-TYPE 
                3               320 
  TMEM90B MUTATED TMEM90B WILD-TYPE 
                3               320 
[1] "ZNF799 MUTATION ANALYSIS"
[1] 3
  ZNF799 MUTATED ZNF799 WILD-TYPE 
               5              318 
  ZNF799 MUTATED ZNF799 WILD-TYPE 
               5              318 
[1] "PPM1D MUTATION ANALYSIS"
[1] 3
  PPM1D MUTATED PPM1D WILD-TYPE 
              5             318 
  PPM1D MUTATED PPM1D WILD-TYPE 
              5             318 
[1] "MAP3K3 MUTATION ANALYSIS"
[1] 3
  MAP3K3 MUTATED MAP3K3 WILD-TYPE 
               4              319 
  MAP3K3 MUTATED MAP3K3 WILD-TYPE 
               4              319 
[1] "TROAP MUTATION ANALYSIS"
[1] 3
  TROAP MUTATED TROAP WILD-TYPE 
              3             320 
  TROAP MUTATED TROAP WILD-TYPE 
              3             320 
[1] "SYNPO2L MUTATION ANALYSIS"
[1] 3
  SYNPO2L MUTATED SYNPO2L WILD-TYPE 
                3               320 
  SYNPO2L MUTATED SYNPO2L WILD-TYPE 
                3               320 
[1] "ATAD2 MUTATION ANALYSIS"
[1] 3
  ATAD2 MUTATED ATAD2 WILD-TYPE 
              4             319 
  ATAD2 MUTATED ATAD2 WILD-TYPE 
              4             319 
[1] "KRAS MUTATION ANALYSIS"
[1] 3
  KRAS MUTATED KRAS WILD-TYPE 
             3            320 
  KRAS MUTATED KRAS WILD-TYPE 
             3            320 
[1] "SLC5A11 MUTATION ANALYSIS"
[1] 3
  SLC5A11 MUTATED SLC5A11 WILD-TYPE 
                3               320 
  SLC5A11 MUTATED SLC5A11 WILD-TYPE 
                3               320 
[1] "PRG4 MUTATION ANALYSIS"
[1] 3
  PRG4 MUTATED PRG4 WILD-TYPE 
             4            319 
  PRG4 MUTATED PRG4 WILD-TYPE 
             4            319 
[1] "SCUBE2 MUTATION ANALYSIS"
[1] 3
  SCUBE2 MUTATED SCUBE2 WILD-TYPE 
               3              320 
  SCUBE2 MUTATED SCUBE2 WILD-TYPE 
               3              320 
[1] "ZNF479 MUTATION ANALYSIS"
[1] 3
  ZNF479 MUTATED ZNF479 WILD-TYPE 
               3              320 
  ZNF479 MUTATED ZNF479 WILD-TYPE 
               3              320 
[1] "SREBF2 MUTATION ANALYSIS"
[1] 3
  SREBF2 MUTATED SREBF2 WILD-TYPE 
               3              320 
  SREBF2 MUTATED SREBF2 WILD-TYPE 
               3              320 
[1] "SLC26A11 MUTATION ANALYSIS"
[1] 3
  SLC26A11 MUTATED SLC26A11 WILD-TYPE 
                 3                320 
  SLC26A11 MUTATED SLC26A11 WILD-TYPE 
                 3                320 
[1] "TSC22D1 MUTATION ANALYSIS"
[1] 3
  TSC22D1 MUTATED TSC22D1 WILD-TYPE 
                3               320 
  TSC22D1 MUTATED TSC22D1 WILD-TYPE 
                3               320 
[1] "ANKRD30A MUTATION ANALYSIS"
[1] 3
  ANKRD30A MUTATED ANKRD30A WILD-TYPE 
                 5                318 
  ANKRD30A MUTATED ANKRD30A WILD-TYPE 
                 5                318 
[1] "FAM155A MUTATION ANALYSIS"
[1] 3
  FAM155A MUTATED FAM155A WILD-TYPE 
                4               319 
  FAM155A MUTATED FAM155A WILD-TYPE 
                4               319 
[1] "SLA MUTATION ANALYSIS"
[1] 3
  SLA MUTATED SLA WILD-TYPE 
            3           320 
  SLA MUTATED SLA WILD-TYPE 
            3           320 
[1] "ZFHX3 MUTATION ANALYSIS"
[1] 3
  ZFHX3 MUTATED ZFHX3 WILD-TYPE 
             10             313 
  ZFHX3 MUTATED ZFHX3 WILD-TYPE 
             10             313 
[1] "ARMCX3 MUTATION ANALYSIS"
[1] 3
  ARMCX3 MUTATED ARMCX3 WILD-TYPE 
               3              320 
  ARMCX3 MUTATED ARMCX3 WILD-TYPE 
               3              320 
[1] "SLC25A45 MUTATION ANALYSIS"
[1] 3
  SLC25A45 MUTATED SLC25A45 WILD-TYPE 
                 3                320 
  SLC25A45 MUTATED SLC25A45 WILD-TYPE 
                 3                320 
[1] "COL5A3 MUTATION ANALYSIS"
[1] 3
  COL5A3 MUTATED COL5A3 WILD-TYPE 
               6              317 
  COL5A3 MUTATED COL5A3 WILD-TYPE 
               6              317 
[1] "CDC27 MUTATION ANALYSIS"
[1] 3
  CDC27 MUTATED CDC27 WILD-TYPE 
              3             320 
  CDC27 MUTATED CDC27 WILD-TYPE 
              3             320 
[1] "data2feature, selection=ALL"
[1] "CN_CNMF"               "METHLYATION_CNMF"      "RPPA_CNMF"            
[4] "RPPA_CHIERARCHICAL"    "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL"
[7] "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 

Input Data has 8 rows and 323 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'RPPA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'RPPA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"               "METHLYATION_CNMF"      "RPPA_CNMF"            
[4] "RPPA_CHIERARCHICAL"    "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL"
[7] "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 323 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = BRAF MUTATION ANALYSIS
D1V1, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            7             19
  CLUS_2          149             95
  CLUS_3           26             22
D1V2, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1           10             95
  CLUS_2           25             19
  CLUS_3          148             26
D1V3, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1           19             44
  CLUS_2           57             18
  CLUS_3           42             37
D1V4, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1           11             16
  CLUS_2           78             17
  CLUS_3           29             66
D1V5, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            6             96
  CLUS_2           20             16
  CLUS_3           57             13
  CLUS_4           90              5
D1V6, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1           11             99
  CLUS_2          120             16
  CLUS_3           42             15
D1V7, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            5            100
  CLUS_2          101             15
  CLUS_3           76             25
D1V8, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            1             96
  CLUS_2           97             25
  CLUS_3           84             19

Clustering(2) Variable = EMG1 MUTATION ANALYSIS
D2V1, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            1             25
  CLUS_2            4            240
  CLUS_3            1             47
D2V2, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            2            103
  CLUS_2            0             44
  CLUS_3            4            170
D2V3, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            0             63
  CLUS_2            3             72
  CLUS_3            1             78
D2V4, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            0             27
  CLUS_2            4             91
  CLUS_3            0             95
D2V5, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            2            100
  CLUS_2            0             36
  CLUS_3            1             69
  CLUS_4            2             93
D2V6, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            2            108
  CLUS_2            2            134
  CLUS_3            1             56
D2V7, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            2            103
  CLUS_2            2            114
  CLUS_3            2             99
D2V8, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            2             95
  CLUS_2            4            118
  CLUS_3            0            103

Clustering(3) Variable = HRAS MUTATION ANALYSIS
D3V1, multiclass
        clus
vv       HRAS MUTATED HRAS WILD-TYPE
  CLUS_1            0             26
  CLUS_2            4            240
  CLUS_3            8             40
D3V2, multiclass
        clus
vv       HRAS MUTATED HRAS WILD-TYPE
  CLUS_1           12             93
  CLUS_2            0             44
  CLUS_3            0            174
D3V3, multiclass
        clus
vv       HRAS MUTATED HRAS WILD-TYPE
  CLUS_1            9             54
  CLUS_2            2             73
  CLUS_3            0             79
D3V4, multiclass
        clus
vv       HRAS MUTATED HRAS WILD-TYPE
  CLUS_1            2             25
  CLUS_2            0             95
  CLUS_3            9             86
D3V5, multiclass
        clus
vv       HRAS MUTATED HRAS WILD-TYPE
  CLUS_1           12             90
  CLUS_2            0             36
  CLUS_3            0             70
  CLUS_4            0             95
D3V6, multiclass
        clus
vv       HRAS MUTATED HRAS WILD-TYPE
  CLUS_1           12             98
  CLUS_2            0            136
  CLUS_3            0             57
D3V7, multiclass
        clus
vv       HRAS MUTATED HRAS WILD-TYPE
  CLUS_1           12             93
  CLUS_2            0            116
  CLUS_3            0            101
D3V8, multiclass
        clus
vv       HRAS MUTATED HRAS WILD-TYPE
  CLUS_1           12             85
  CLUS_2            0            122
  CLUS_3            0            103

Clustering(4) Variable = NRAS MUTATION ANALYSIS
D4V1, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            1             25
  CLUS_2           14            230
  CLUS_3            9             39
D4V2, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1           26             79
  CLUS_2            0             44
  CLUS_3            0            174
D4V3, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            4             59
  CLUS_2            5             70
  CLUS_3            5             74
D4V4, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            5             22
  CLUS_2            0             95
  CLUS_3            9             86
D4V5, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1           23             79
  CLUS_2            0             36
  CLUS_3            0             70
  CLUS_4            0             95
D4V6, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1           23             87
  CLUS_2            0            136
  CLUS_3            0             57
D4V7, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1           25             80
  CLUS_2            0            116
  CLUS_3            1            100
D4V8, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1           25             72
  CLUS_2            1            121
  CLUS_3            0            103

Clustering(5) Variable = PTTG1IP MUTATION ANALYSIS
D5V1, multiclass
        clus
vv       PTTG1IP MUTATED PTTG1IP WILD-TYPE
  CLUS_1               0                26
  CLUS_2               4               240
  CLUS_3               0                48
D5V2, multiclass
        clus
vv       PTTG1IP MUTATED PTTG1IP WILD-TYPE
  CLUS_1               1               104
  CLUS_2               0                44
  CLUS_3               3               171
D5V3, multiclass
[1] "Remove cluster labels:" "PTTG1IP MUTATED"       
clus
  PTTG1IP MUTATED PTTG1IP WILD-TYPE 
                2               215 
       TCGA-BJ-A0YZ        TCGA-BJ-A0Z0        TCGA-BJ-A0Z2        TCGA-BJ-A0Z3 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A0Z5        TCGA-BJ-A0Z9        TCGA-BJ-A0ZA        TCGA-BJ-A0ZB 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A0ZC        TCGA-BJ-A0ZE        TCGA-BJ-A0ZF        TCGA-BJ-A0ZG 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A0ZJ        TCGA-BJ-A18Y        TCGA-BJ-A18Z        TCGA-BJ-A190 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A191        TCGA-BJ-A192        TCGA-BJ-A28R        TCGA-BJ-A28S 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A28T        TCGA-BJ-A28V        TCGA-BJ-A28Z        TCGA-BJ-A290 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A2N7        TCGA-BJ-A2N9        TCGA-BJ-A2NA        TCGA-BJ-A2P4 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A3EZ        TCGA-BJ-A3F0        TCGA-CE-A13K        TCGA-CE-A27D 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-CE-A3MD        TCGA-CE-A3ME        TCGA-DE-A0Y2        TCGA-DE-A2OL 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DE-A3KN        TCGA-DJ-A13M        TCGA-DJ-A13O        TCGA-DJ-A13R 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A13S        TCGA-DJ-A13V        TCGA-DJ-A13W        TCGA-DJ-A13X 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A1QD        TCGA-DJ-A1QE        TCGA-DJ-A1QF        TCGA-DJ-A1QG 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A1QI        TCGA-DJ-A1QL        TCGA-DJ-A1QM        TCGA-DJ-A1QN 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A1QO        TCGA-DJ-A2PN        TCGA-DJ-A2PO        TCGA-DJ-A2PP 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A2PQ        TCGA-DJ-A2PR        TCGA-DJ-A2PS        TCGA-DJ-A2PU 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A2PV        TCGA-DJ-A2PW        TCGA-DJ-A2PY        TCGA-DJ-A2PZ 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A2Q0        TCGA-DJ-A2Q1        TCGA-DJ-A2Q2        TCGA-DJ-A2Q4 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A2Q5        TCGA-DJ-A2Q6        TCGA-DJ-A2Q7        TCGA-DJ-A2Q8 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A2Q9        TCGA-DJ-A2QA        TCGA-DJ-A2QB        TCGA-DJ-A2QC 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DO-A1JZ        TCGA-DO-A1K0        TCGA-E3-A3DY        TCGA-E3-A3DZ 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-E3-A3E0        TCGA-E3-A3E1        TCGA-E3-A3E3        TCGA-E3-A3E5 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-E8-A2EA        TCGA-EL-A3CL        TCGA-EL-A3CM        TCGA-EL-A3CN 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3CO        TCGA-EL-A3CP        TCGA-EL-A3CR        TCGA-EL-A3CS 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3CT        TCGA-EL-A3CU        TCGA-EL-A3CV        TCGA-EL-A3CW 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3CX        TCGA-EL-A3CY        TCGA-EL-A3CZ        TCGA-EL-A3D0 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3D1        TCGA-EL-A3D4        TCGA-EL-A3D5        TCGA-EL-A3D6 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3GO        TCGA-EL-A3GP        TCGA-EL-A3GQ        TCGA-EL-A3GR 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3GS        TCGA-EL-A3GV        TCGA-EL-A3GW        TCGA-EL-A3GX 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3GY        TCGA-EL-A3GZ        TCGA-EL-A3H1        TCGA-EL-A3H2 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3H3        TCGA-EL-A3H4        TCGA-EL-A3H5        TCGA-EL-A3H7 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3H8        TCGA-EL-A3MW        TCGA-EL-A3MX        TCGA-EL-A3MY 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3MZ        TCGA-EL-A3N3        TCGA-EM-A1CT        TCGA-EM-A1CU 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A1CV        TCGA-EM-A1CW        TCGA-EM-A1YA        TCGA-EM-A1YB 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A1YC        TCGA-EM-A1YD        TCGA-EM-A1YE        TCGA-EM-A22I 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A22J        TCGA-EM-A22L        TCGA-EM-A22M        TCGA-EM-A22O 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A22Q        TCGA-EM-A2CJ        TCGA-EM-A2CK        TCGA-EM-A2CL 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A2CM        TCGA-EM-A2CN        TCGA-EM-A2CO        TCGA-EM-A2CP 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A2CQ        TCGA-EM-A2CR        TCGA-EM-A2CU        TCGA-EM-A2OV 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A2OY        TCGA-EM-A2P1        TCGA-EM-A3AI        TCGA-EM-A3AJ 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A3AL        TCGA-EM-A3AN        TCGA-EM-A3AO        TCGA-EM-A3AP 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A3FJ        TCGA-EM-A3FL        TCGA-EM-A3FN        TCGA-EM-A3FO 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A3FP        TCGA-ET-A25G        TCGA-ET-A25O        TCGA-ET-A2MY 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A2MZ        TCGA-ET-A2N0        TCGA-ET-A2N1        TCGA-ET-A2N4 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A2N5        TCGA-ET-A39I        TCGA-ET-A39J        TCGA-ET-A39L 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A39M        TCGA-ET-A39N        TCGA-ET-A39P        TCGA-ET-A39R 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A39T        TCGA-ET-A3BN        TCGA-ET-A3BP        TCGA-ET-A3BS 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A3BT        TCGA-ET-A3BU        TCGA-ET-A3BV        TCGA-ET-A3BW 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A3BX        TCGA-ET-A3DO        TCGA-ET-A3DP        TCGA-ET-A3DS 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A3DT        TCGA-ET-A3DV        TCGA-ET-A3DW        TCGA-FE-A22Z 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-FE-A230        TCGA-FE-A231        TCGA-FE-A232        TCGA-FE-A233 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-FE-A234        TCGA-FE-A235        TCGA-FE-A236        TCGA-FE-A237 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-FE-A23A        TCGA-FY-A2QD        TCGA-FY-A3BL        TCGA-FY-A3ON 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-GE-A2C6        TCGA-H2-A2K9        TCGA-IM-A3EB        TCGA-IM-A3ED 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-J8-A3NZ        TCGA-J8-A3O0        TCGA-J8-A3O1 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
D5V4, multiclass
[1] "Remove cluster labels:" "PTTG1IP MUTATED"       
clus
  PTTG1IP MUTATED PTTG1IP WILD-TYPE 
                2               215 
       TCGA-BJ-A0YZ        TCGA-BJ-A0Z0        TCGA-BJ-A0Z2        TCGA-BJ-A0Z3 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A0Z5        TCGA-BJ-A0Z9        TCGA-BJ-A0ZA        TCGA-BJ-A0ZB 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A0ZC        TCGA-BJ-A0ZE        TCGA-BJ-A0ZF        TCGA-BJ-A0ZG 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A0ZJ        TCGA-BJ-A18Y        TCGA-BJ-A18Z        TCGA-BJ-A190 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A191        TCGA-BJ-A192        TCGA-BJ-A28R        TCGA-BJ-A28S 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A28T        TCGA-BJ-A28V        TCGA-BJ-A28Z        TCGA-BJ-A290 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A2N7        TCGA-BJ-A2N9        TCGA-BJ-A2NA        TCGA-BJ-A2P4 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-BJ-A3EZ        TCGA-BJ-A3F0        TCGA-CE-A13K        TCGA-CE-A27D 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-CE-A3MD        TCGA-CE-A3ME        TCGA-DE-A0Y2        TCGA-DE-A2OL 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DE-A3KN        TCGA-DJ-A13M        TCGA-DJ-A13O        TCGA-DJ-A13R 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A13S        TCGA-DJ-A13V        TCGA-DJ-A13W        TCGA-DJ-A13X 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A1QD        TCGA-DJ-A1QE        TCGA-DJ-A1QF        TCGA-DJ-A1QG 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A1QI        TCGA-DJ-A1QL        TCGA-DJ-A1QM        TCGA-DJ-A1QN 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A1QO        TCGA-DJ-A2PN        TCGA-DJ-A2PO        TCGA-DJ-A2PP 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A2PQ        TCGA-DJ-A2PR        TCGA-DJ-A2PS        TCGA-DJ-A2PU 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A2PV        TCGA-DJ-A2PW        TCGA-DJ-A2PY        TCGA-DJ-A2PZ 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A2Q0        TCGA-DJ-A2Q1        TCGA-DJ-A2Q2        TCGA-DJ-A2Q4 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A2Q5        TCGA-DJ-A2Q6        TCGA-DJ-A2Q7        TCGA-DJ-A2Q8 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DJ-A2Q9        TCGA-DJ-A2QA        TCGA-DJ-A2QB        TCGA-DJ-A2QC 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-DO-A1JZ        TCGA-DO-A1K0        TCGA-E3-A3DY        TCGA-E3-A3DZ 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-E3-A3E0        TCGA-E3-A3E1        TCGA-E3-A3E3        TCGA-E3-A3E5 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-E8-A2EA        TCGA-EL-A3CL        TCGA-EL-A3CM        TCGA-EL-A3CN 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3CO        TCGA-EL-A3CP        TCGA-EL-A3CR        TCGA-EL-A3CS 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3CT        TCGA-EL-A3CU        TCGA-EL-A3CV        TCGA-EL-A3CW 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3CX        TCGA-EL-A3CY        TCGA-EL-A3CZ        TCGA-EL-A3D0 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3D1        TCGA-EL-A3D4        TCGA-EL-A3D5        TCGA-EL-A3D6 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3GO        TCGA-EL-A3GP        TCGA-EL-A3GQ        TCGA-EL-A3GR 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3GS        TCGA-EL-A3GV        TCGA-EL-A3GW        TCGA-EL-A3GX 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3GY        TCGA-EL-A3GZ        TCGA-EL-A3H1        TCGA-EL-A3H2 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3H3        TCGA-EL-A3H4        TCGA-EL-A3H5        TCGA-EL-A3H7 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3H8        TCGA-EL-A3MW        TCGA-EL-A3MX        TCGA-EL-A3MY 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EL-A3MZ        TCGA-EL-A3N3        TCGA-EM-A1CT        TCGA-EM-A1CU 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A1CV        TCGA-EM-A1CW        TCGA-EM-A1YA        TCGA-EM-A1YB 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A1YC        TCGA-EM-A1YD        TCGA-EM-A1YE        TCGA-EM-A22I 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A22J        TCGA-EM-A22L        TCGA-EM-A22M        TCGA-EM-A22O 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A22Q        TCGA-EM-A2CJ        TCGA-EM-A2CK        TCGA-EM-A2CL 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A2CM        TCGA-EM-A2CN        TCGA-EM-A2CO        TCGA-EM-A2CP 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A2CQ        TCGA-EM-A2CR        TCGA-EM-A2CU        TCGA-EM-A2OV 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A2OY        TCGA-EM-A2P1        TCGA-EM-A3AI        TCGA-EM-A3AJ 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A3AL        TCGA-EM-A3AN        TCGA-EM-A3AO        TCGA-EM-A3AP 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A3FJ        TCGA-EM-A3FL        TCGA-EM-A3FN        TCGA-EM-A3FO 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-EM-A3FP        TCGA-ET-A25G        TCGA-ET-A25O        TCGA-ET-A2MY 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A2MZ        TCGA-ET-A2N0        TCGA-ET-A2N1        TCGA-ET-A2N4 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A2N5        TCGA-ET-A39I        TCGA-ET-A39J        TCGA-ET-A39L 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A39M        TCGA-ET-A39N        TCGA-ET-A39P        TCGA-ET-A39R 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A39T        TCGA-ET-A3BN        TCGA-ET-A3BP        TCGA-ET-A3BS 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A3BT        TCGA-ET-A3BU        TCGA-ET-A3BV        TCGA-ET-A3BW 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A3BX        TCGA-ET-A3DO        TCGA-ET-A3DP        TCGA-ET-A3DS 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-ET-A3DT        TCGA-ET-A3DV        TCGA-ET-A3DW        TCGA-FE-A22Z 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-FE-A230        TCGA-FE-A231        TCGA-FE-A232        TCGA-FE-A233 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-FE-A234        TCGA-FE-A235        TCGA-FE-A236        TCGA-FE-A237 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-FE-A23A        TCGA-FY-A2QD        TCGA-FY-A3BL        TCGA-FY-A3ON 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-GE-A2C6        TCGA-H2-A2K9        TCGA-IM-A3EB        TCGA-IM-A3ED 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
       TCGA-J8-A3NZ        TCGA-J8-A3O0        TCGA-J8-A3O1 
"PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" "PTTG1IP WILD-TYPE" 
D5V5, multiclass
        clus
vv       PTTG1IP MUTATED PTTG1IP WILD-TYPE
  CLUS_1               0               102
  CLUS_2               0                36
  CLUS_3               1                69
  CLUS_4               3                92
D5V6, multiclass
        clus
vv       PTTG1IP MUTATED PTTG1IP WILD-TYPE
  CLUS_1               0               110
  CLUS_2               3               133
  CLUS_3               1                56
D5V7, multiclass
        clus
vv       PTTG1IP MUTATED PTTG1IP WILD-TYPE
  CLUS_1               0               105
  CLUS_2               2               114
  CLUS_3               2                99
D5V8, multiclass
        clus
vv       PTTG1IP MUTATED PTTG1IP WILD-TYPE
  CLUS_1               0                97
  CLUS_2               4               118
  CLUS_3               0               103

Clustering(6) Variable = RPTN MUTATION ANALYSIS
D6V1, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            0             26
  CLUS_2            7            237
  CLUS_3            1             47
D6V2, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            2            103
  CLUS_2            0             44
  CLUS_3            6            168
D6V3, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            2             61
  CLUS_2            2             73
  CLUS_3            0             79
D6V4, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            1             26
  CLUS_2            2             93
  CLUS_3            1             94
D6V5, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            3             99
  CLUS_2            0             36
  CLUS_3            5             65
  CLUS_4            0             95
D6V6, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            2            108
  CLUS_2            3            133
  CLUS_3            3             54
D6V7, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            2            103
  CLUS_2            4            112
  CLUS_3            2             99
D6V8, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            2             95
  CLUS_2            3            119
  CLUS_3            3            100

Clustering(7) Variable = EIF1AX MUTATION ANALYSIS
D7V1, multiclass
        clus
vv       EIF1AX MUTATED EIF1AX WILD-TYPE
  CLUS_1              0               26
  CLUS_2              5              239
  CLUS_3              0               48
D7V2, multiclass
        clus
vv       EIF1AX MUTATED EIF1AX WILD-TYPE
  CLUS_1              4              101
  CLUS_2              1               43
  CLUS_3              0              174
D7V3, multiclass
        clus
vv       EIF1AX MUTATED EIF1AX WILD-TYPE
  CLUS_1              3               60
  CLUS_2              1               74
  CLUS_3              1               78
D7V4, multiclass
        clus
vv       EIF1AX MUTATED EIF1AX WILD-TYPE
  CLUS_1              1               26
  CLUS_2              0               95
  CLUS_3              4               91
D7V5, multiclass
        clus
vv       EIF1AX MUTATED EIF1AX WILD-TYPE
  CLUS_1              4               98
  CLUS_2              1               35
  CLUS_3              0               70
  CLUS_4              0               95
D7V6, multiclass
        clus
vv       EIF1AX MUTATED EIF1AX WILD-TYPE
  CLUS_1              5              105
  CLUS_2              0              136
  CLUS_3              0               57
D7V7, multiclass
        clus
vv       EIF1AX MUTATED EIF1AX WILD-TYPE
  CLUS_1              4              101
  CLUS_2              0              116
  CLUS_3              1              100
D7V8, multiclass
        clus
vv       EIF1AX MUTATED EIF1AX WILD-TYPE
  CLUS_1              3               94
  CLUS_2              2              120
  CLUS_3              0              103

Clustering(8) Variable = CCDC15 MUTATION ANALYSIS
D8V1, multiclass
        clus
vv       CCDC15 MUTATED CCDC15 WILD-TYPE
  CLUS_1              0               26
  CLUS_2              5              239
  CLUS_3              0               48
D8V2, multiclass
        clus
vv       CCDC15 MUTATED CCDC15 WILD-TYPE
  CLUS_1              0              105
  CLUS_2              0               44
  CLUS_3              5              169
D8V3, multiclass
        clus
vv       CCDC15 MUTATED CCDC15 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              1               74
  CLUS_3              2               77
D8V4, multiclass
        clus
vv       CCDC15 MUTATED CCDC15 WILD-TYPE
  CLUS_1              0               27
  CLUS_2              3               92
  CLUS_3              1               94
D8V5, multiclass
        clus
vv       CCDC15 MUTATED CCDC15 WILD-TYPE
  CLUS_1              0              102
  CLUS_2              0               36
  CLUS_3              3               67
  CLUS_4              2               93
D8V6, multiclass
        clus
vv       CCDC15 MUTATED CCDC15 WILD-TYPE
  CLUS_1              0              110
  CLUS_2              3              133
  CLUS_3              2               55
D8V7, multiclass
        clus
vv       CCDC15 MUTATED CCDC15 WILD-TYPE
  CLUS_1              1              104
  CLUS_2              3              113
  CLUS_3              1              100
D8V8, multiclass
        clus
vv       CCDC15 MUTATED CCDC15 WILD-TYPE
  CLUS_1              1               96
  CLUS_2              1              121
  CLUS_3              3              100

Clustering(9) Variable = ZNF845 MUTATION ANALYSIS
D9V1, multiclass
        clus
vv       ZNF845 MUTATED ZNF845 WILD-TYPE
  CLUS_1              1               25
  CLUS_2              5              239
  CLUS_3              0               48
D9V2, multiclass
        clus
vv       ZNF845 MUTATED ZNF845 WILD-TYPE
  CLUS_1              3              102
  CLUS_2              0               44
  CLUS_3              3              171
D9V3, multiclass
        clus
vv       ZNF845 MUTATED ZNF845 WILD-TYPE
  CLUS_1              0               63
  CLUS_2              2               73
  CLUS_3              1               78
D9V4, multiclass
        clus
vv       ZNF845 MUTATED ZNF845 WILD-TYPE
  CLUS_1              0               27
  CLUS_2              3               92
  CLUS_3              0               95
D9V5, multiclass
        clus
vv       ZNF845 MUTATED ZNF845 WILD-TYPE
  CLUS_1              2              100
  CLUS_2              0               36
  CLUS_3              2               68
  CLUS_4              2               93
D9V6, multiclass
        clus
vv       ZNF845 MUTATED ZNF845 WILD-TYPE
  CLUS_1              1              109
  CLUS_2              2              134
  CLUS_3              3               54
D9V7, multiclass
        clus
vv       ZNF845 MUTATED ZNF845 WILD-TYPE
  CLUS_1              1              104
  CLUS_2              4              112
  CLUS_3              1              100
D9V8, multiclass
        clus
vv       ZNF845 MUTATED ZNF845 WILD-TYPE
  CLUS_1              1               96
  CLUS_2              1              121
  CLUS_3              4               99

Clustering(10) Variable = ZNF878 MUTATION ANALYSIS
D10V1, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              0               26
  CLUS_2              3              241
  CLUS_3              0               48
D10V2, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              2              103
  CLUS_2              1               43
  CLUS_3              1              173
D10V3, multiclass
[1] "Remove cluster labels:" "ZNF878 MUTATED"        
clus
  ZNF878 MUTATED ZNF878 WILD-TYPE 
               2              215 
      TCGA-BJ-A0YZ       TCGA-BJ-A0Z0       TCGA-BJ-A0Z2       TCGA-BJ-A0Z3 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A0Z5       TCGA-BJ-A0Z9       TCGA-BJ-A0ZA       TCGA-BJ-A0ZB 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A0ZC       TCGA-BJ-A0ZE       TCGA-BJ-A0ZF       TCGA-BJ-A0ZG 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A0ZJ       TCGA-BJ-A18Y       TCGA-BJ-A18Z       TCGA-BJ-A190 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A191       TCGA-BJ-A192       TCGA-BJ-A28R       TCGA-BJ-A28S 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A28T       TCGA-BJ-A28V       TCGA-BJ-A28Z       TCGA-BJ-A290 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A2N7       TCGA-BJ-A2N9       TCGA-BJ-A2NA       TCGA-BJ-A2P4 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A3EZ       TCGA-BJ-A3F0       TCGA-CE-A13K       TCGA-CE-A27D 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-CE-A3MD       TCGA-CE-A3ME       TCGA-DE-A0Y2       TCGA-DE-A2OL 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DE-A3KN       TCGA-DJ-A13M       TCGA-DJ-A13O       TCGA-DJ-A13R 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A13S       TCGA-DJ-A13V       TCGA-DJ-A13W       TCGA-DJ-A13X 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A1QD       TCGA-DJ-A1QE       TCGA-DJ-A1QF       TCGA-DJ-A1QG 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A1QI       TCGA-DJ-A1QL       TCGA-DJ-A1QM       TCGA-DJ-A1QN 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A1QO       TCGA-DJ-A2PN       TCGA-DJ-A2PO       TCGA-DJ-A2PP 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A2PQ       TCGA-DJ-A2PR       TCGA-DJ-A2PS       TCGA-DJ-A2PU 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A2PV       TCGA-DJ-A2PW       TCGA-DJ-A2PY       TCGA-DJ-A2PZ 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A2Q0       TCGA-DJ-A2Q1       TCGA-DJ-A2Q2       TCGA-DJ-A2Q4 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A2Q5       TCGA-DJ-A2Q6       TCGA-DJ-A2Q7       TCGA-DJ-A2Q8 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A2Q9       TCGA-DJ-A2QA       TCGA-DJ-A2QB       TCGA-DJ-A2QC 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DO-A1JZ       TCGA-DO-A1K0       TCGA-E3-A3DY       TCGA-E3-A3DZ 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-E3-A3E0       TCGA-E3-A3E1       TCGA-E3-A3E3       TCGA-E3-A3E5 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3CL       TCGA-EL-A3CM       TCGA-EL-A3CN       TCGA-EL-A3CO 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3CP       TCGA-EL-A3CR       TCGA-EL-A3CS       TCGA-EL-A3CT 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3CU       TCGA-EL-A3CV       TCGA-EL-A3CW       TCGA-EL-A3CX 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3CY       TCGA-EL-A3CZ       TCGA-EL-A3D0       TCGA-EL-A3D1 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3D4       TCGA-EL-A3D5       TCGA-EL-A3D6       TCGA-EL-A3GO 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3GP       TCGA-EL-A3GQ       TCGA-EL-A3GR       TCGA-EL-A3GS 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3GU       TCGA-EL-A3GV       TCGA-EL-A3GW       TCGA-EL-A3GX 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3GY       TCGA-EL-A3GZ       TCGA-EL-A3H1       TCGA-EL-A3H2 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3H4       TCGA-EL-A3H5       TCGA-EL-A3H7       TCGA-EL-A3H8 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3MW       TCGA-EL-A3MX       TCGA-EL-A3MY       TCGA-EL-A3MZ 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3N2       TCGA-EL-A3N3       TCGA-EM-A1CT       TCGA-EM-A1CU 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A1CV       TCGA-EM-A1CW       TCGA-EM-A1YA       TCGA-EM-A1YB 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A1YC       TCGA-EM-A1YD       TCGA-EM-A1YE       TCGA-EM-A22I 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A22J       TCGA-EM-A22L       TCGA-EM-A22M       TCGA-EM-A22O 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A22Q       TCGA-EM-A2CJ       TCGA-EM-A2CK       TCGA-EM-A2CL 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A2CM       TCGA-EM-A2CN       TCGA-EM-A2CO       TCGA-EM-A2CP 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A2CQ       TCGA-EM-A2CR       TCGA-EM-A2CU       TCGA-EM-A2OV 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A2OY       TCGA-EM-A2P1       TCGA-EM-A3AI       TCGA-EM-A3AJ 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A3AL       TCGA-EM-A3AN       TCGA-EM-A3AO       TCGA-EM-A3AP 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A3FJ       TCGA-EM-A3FL       TCGA-EM-A3FN       TCGA-EM-A3FO 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A3FP       TCGA-ET-A25G       TCGA-ET-A25O       TCGA-ET-A2MY 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A2MZ       TCGA-ET-A2N0       TCGA-ET-A2N1       TCGA-ET-A2N4 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A2N5       TCGA-ET-A39I       TCGA-ET-A39J       TCGA-ET-A39L 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A39M       TCGA-ET-A39N       TCGA-ET-A39P       TCGA-ET-A39R 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A39T       TCGA-ET-A3BN       TCGA-ET-A3BP       TCGA-ET-A3BS 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A3BT       TCGA-ET-A3BU       TCGA-ET-A3BV       TCGA-ET-A3BW 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A3BX       TCGA-ET-A3DO       TCGA-ET-A3DP       TCGA-ET-A3DS 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A3DT       TCGA-ET-A3DV       TCGA-ET-A3DW       TCGA-FE-A22Z 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-FE-A230       TCGA-FE-A231       TCGA-FE-A232       TCGA-FE-A233 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-FE-A234       TCGA-FE-A235       TCGA-FE-A236       TCGA-FE-A237 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-FE-A23A       TCGA-FY-A2QD       TCGA-FY-A3BL       TCGA-FY-A3ON 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-GE-A2C6       TCGA-H2-A2K9       TCGA-IM-A3EB       TCGA-IM-A3ED 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-J8-A3NZ       TCGA-J8-A3O0       TCGA-J8-A3O1 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
D10V4, multiclass
[1] "Remove cluster labels:" "ZNF878 MUTATED"        
clus
  ZNF878 MUTATED ZNF878 WILD-TYPE 
               2              215 
      TCGA-BJ-A0YZ       TCGA-BJ-A0Z0       TCGA-BJ-A0Z2       TCGA-BJ-A0Z3 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A0Z5       TCGA-BJ-A0Z9       TCGA-BJ-A0ZA       TCGA-BJ-A0ZB 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A0ZC       TCGA-BJ-A0ZE       TCGA-BJ-A0ZF       TCGA-BJ-A0ZG 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A0ZJ       TCGA-BJ-A18Y       TCGA-BJ-A18Z       TCGA-BJ-A190 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A191       TCGA-BJ-A192       TCGA-BJ-A28R       TCGA-BJ-A28S 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A28T       TCGA-BJ-A28V       TCGA-BJ-A28Z       TCGA-BJ-A290 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A2N7       TCGA-BJ-A2N9       TCGA-BJ-A2NA       TCGA-BJ-A2P4 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-BJ-A3EZ       TCGA-BJ-A3F0       TCGA-CE-A13K       TCGA-CE-A27D 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-CE-A3MD       TCGA-CE-A3ME       TCGA-DE-A0Y2       TCGA-DE-A2OL 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DE-A3KN       TCGA-DJ-A13M       TCGA-DJ-A13O       TCGA-DJ-A13R 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A13S       TCGA-DJ-A13V       TCGA-DJ-A13W       TCGA-DJ-A13X 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A1QD       TCGA-DJ-A1QE       TCGA-DJ-A1QF       TCGA-DJ-A1QG 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A1QI       TCGA-DJ-A1QL       TCGA-DJ-A1QM       TCGA-DJ-A1QN 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A1QO       TCGA-DJ-A2PN       TCGA-DJ-A2PO       TCGA-DJ-A2PP 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A2PQ       TCGA-DJ-A2PR       TCGA-DJ-A2PS       TCGA-DJ-A2PU 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A2PV       TCGA-DJ-A2PW       TCGA-DJ-A2PY       TCGA-DJ-A2PZ 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A2Q0       TCGA-DJ-A2Q1       TCGA-DJ-A2Q2       TCGA-DJ-A2Q4 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A2Q5       TCGA-DJ-A2Q6       TCGA-DJ-A2Q7       TCGA-DJ-A2Q8 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DJ-A2Q9       TCGA-DJ-A2QA       TCGA-DJ-A2QB       TCGA-DJ-A2QC 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-DO-A1JZ       TCGA-DO-A1K0       TCGA-E3-A3DY       TCGA-E3-A3DZ 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-E3-A3E0       TCGA-E3-A3E1       TCGA-E3-A3E3       TCGA-E3-A3E5 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3CL       TCGA-EL-A3CM       TCGA-EL-A3CN       TCGA-EL-A3CO 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3CP       TCGA-EL-A3CR       TCGA-EL-A3CS       TCGA-EL-A3CT 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3CU       TCGA-EL-A3CV       TCGA-EL-A3CW       TCGA-EL-A3CX 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3CY       TCGA-EL-A3CZ       TCGA-EL-A3D0       TCGA-EL-A3D1 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3D4       TCGA-EL-A3D5       TCGA-EL-A3D6       TCGA-EL-A3GO 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3GP       TCGA-EL-A3GQ       TCGA-EL-A3GR       TCGA-EL-A3GS 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3GU       TCGA-EL-A3GV       TCGA-EL-A3GW       TCGA-EL-A3GX 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3GY       TCGA-EL-A3GZ       TCGA-EL-A3H1       TCGA-EL-A3H2 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3H4       TCGA-EL-A3H5       TCGA-EL-A3H7       TCGA-EL-A3H8 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3MW       TCGA-EL-A3MX       TCGA-EL-A3MY       TCGA-EL-A3MZ 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EL-A3N2       TCGA-EL-A3N3       TCGA-EM-A1CT       TCGA-EM-A1CU 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A1CV       TCGA-EM-A1CW       TCGA-EM-A1YA       TCGA-EM-A1YB 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A1YC       TCGA-EM-A1YD       TCGA-EM-A1YE       TCGA-EM-A22I 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A22J       TCGA-EM-A22L       TCGA-EM-A22M       TCGA-EM-A22O 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A22Q       TCGA-EM-A2CJ       TCGA-EM-A2CK       TCGA-EM-A2CL 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A2CM       TCGA-EM-A2CN       TCGA-EM-A2CO       TCGA-EM-A2CP 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A2CQ       TCGA-EM-A2CR       TCGA-EM-A2CU       TCGA-EM-A2OV 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A2OY       TCGA-EM-A2P1       TCGA-EM-A3AI       TCGA-EM-A3AJ 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A3AL       TCGA-EM-A3AN       TCGA-EM-A3AO       TCGA-EM-A3AP 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A3FJ       TCGA-EM-A3FL       TCGA-EM-A3FN       TCGA-EM-A3FO 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-EM-A3FP       TCGA-ET-A25G       TCGA-ET-A25O       TCGA-ET-A2MY 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A2MZ       TCGA-ET-A2N0       TCGA-ET-A2N1       TCGA-ET-A2N4 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A2N5       TCGA-ET-A39I       TCGA-ET-A39J       TCGA-ET-A39L 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A39M       TCGA-ET-A39N       TCGA-ET-A39P       TCGA-ET-A39R 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A39T       TCGA-ET-A3BN       TCGA-ET-A3BP       TCGA-ET-A3BS 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A3BT       TCGA-ET-A3BU       TCGA-ET-A3BV       TCGA-ET-A3BW 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A3BX       TCGA-ET-A3DO       TCGA-ET-A3DP       TCGA-ET-A3DS 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-ET-A3DT       TCGA-ET-A3DV       TCGA-ET-A3DW       TCGA-FE-A22Z 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-FE-A230       TCGA-FE-A231       TCGA-FE-A232       TCGA-FE-A233 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-FE-A234       TCGA-FE-A235       TCGA-FE-A236       TCGA-FE-A237 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-FE-A23A       TCGA-FY-A2QD       TCGA-FY-A3BL       TCGA-FY-A3ON 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-GE-A2C6       TCGA-H2-A2K9       TCGA-IM-A3EB       TCGA-IM-A3ED 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
      TCGA-J8-A3NZ       TCGA-J8-A3O0       TCGA-J8-A3O1 
"ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" "ZNF878 WILD-TYPE" 
D10V5, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              2              100
  CLUS_2              2               34
  CLUS_3              0               70
  CLUS_4              0               95
D10V6, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              2              108
  CLUS_2              2              134
  CLUS_3              0               57
D10V7, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              1              104
  CLUS_2              1              115
  CLUS_3              2               99
D10V8, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              1               96
  CLUS_2              2              120
  CLUS_3              1              102

Clustering(11) Variable = TG MUTATION ANALYSIS
D11V1, multiclass
        clus
vv       TG MUTATED TG WILD-TYPE
  CLUS_1          1           25
  CLUS_2         12          232
  CLUS_3          2           46
D11V2, multiclass
        clus
vv       TG MUTATED TG WILD-TYPE
  CLUS_1         10           95
  CLUS_2          0           44
  CLUS_3          6          168
D11V3, multiclass
        clus
vv       TG MUTATED TG WILD-TYPE
  CLUS_1          1           62
  CLUS_2          5           70
  CLUS_3          5           74
D11V4, multiclass
        clus
vv       TG MUTATED TG WILD-TYPE
  CLUS_1          3           24
  CLUS_2          4           91
  CLUS_3          4           91
D11V5, multiclass
        clus
vv       TG MUTATED TG WILD-TYPE
  CLUS_1          8           94
  CLUS_2          1           35
  CLUS_3          2           68
  CLUS_4          3           92
D11V6, multiclass
        clus
vv       TG MUTATED TG WILD-TYPE
  CLUS_1          8          102
  CLUS_2          4          132
  CLUS_3          2           55
D11V7, multiclass
        clus
vv       TG MUTATED TG WILD-TYPE
  CLUS_1         10           95
  CLUS_2          4          112
  CLUS_3          2           99
D11V8, multiclass
        clus
vv       TG MUTATED TG WILD-TYPE
  CLUS_1         10           87
  CLUS_2          3          119
  CLUS_3          3          100

Clustering(12) Variable = PRB2 MUTATION ANALYSIS
D12V1, multiclass
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            0             26
  CLUS_2            4            240
  CLUS_3            1             47
D12V2, multiclass
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            3            102
  CLUS_2            0             44
  CLUS_3            3            171
D12V3, multiclass
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            0             75
  CLUS_3            4             75
D12V4, multiclass
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            0             27
  CLUS_2            2             93
  CLUS_3            3             92
D12V5, multiclass
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            2            100
  CLUS_2            0             36
  CLUS_3            0             70
  CLUS_4            3             92
D12V6, multiclass
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            2            108
  CLUS_2            3            133
  CLUS_3            0             57
D12V7, multiclass
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            3            102
  CLUS_2            1            115
  CLUS_3            2             99
D12V8, multiclass
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            3             94
  CLUS_2            2            120
  CLUS_3            1            102

Clustering(13) Variable = R3HDM2 MUTATION ANALYSIS
D13V1, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              2               24
  CLUS_2              1              243
  CLUS_3              1               47
D13V2, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              3              102
  CLUS_2              1               43
  CLUS_3              0              174
D13V3, multiclass
[1] "Remove cluster labels:" "R3HDM2 MUTATED"        
clus
  R3HDM2 MUTATED R3HDM2 WILD-TYPE 
               2              215 
      TCGA-BJ-A0YZ       TCGA-BJ-A0Z0       TCGA-BJ-A0Z2       TCGA-BJ-A0Z3 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A0Z5       TCGA-BJ-A0Z9       TCGA-BJ-A0ZA       TCGA-BJ-A0ZB 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A0ZC       TCGA-BJ-A0ZE       TCGA-BJ-A0ZF       TCGA-BJ-A0ZG 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A0ZJ       TCGA-BJ-A18Y       TCGA-BJ-A18Z       TCGA-BJ-A191 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A192       TCGA-BJ-A28R       TCGA-BJ-A28S       TCGA-BJ-A28T 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A28V       TCGA-BJ-A28Z       TCGA-BJ-A290       TCGA-BJ-A2N7 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A2N9       TCGA-BJ-A2NA       TCGA-BJ-A2P4       TCGA-BJ-A3EZ 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A3F0       TCGA-CE-A13K       TCGA-CE-A27D       TCGA-CE-A3MD 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-CE-A3ME       TCGA-DE-A0Y2       TCGA-DE-A2OL       TCGA-DE-A3KN 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A13M       TCGA-DJ-A13O       TCGA-DJ-A13R       TCGA-DJ-A13S 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A13V       TCGA-DJ-A13W       TCGA-DJ-A13X       TCGA-DJ-A1QD 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A1QE       TCGA-DJ-A1QF       TCGA-DJ-A1QG       TCGA-DJ-A1QI 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A1QL       TCGA-DJ-A1QM       TCGA-DJ-A1QN       TCGA-DJ-A1QO 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A2PN       TCGA-DJ-A2PO       TCGA-DJ-A2PP       TCGA-DJ-A2PQ 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A2PR       TCGA-DJ-A2PS       TCGA-DJ-A2PU       TCGA-DJ-A2PV 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A2PW       TCGA-DJ-A2PY       TCGA-DJ-A2PZ       TCGA-DJ-A2Q0 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A2Q1       TCGA-DJ-A2Q2       TCGA-DJ-A2Q4       TCGA-DJ-A2Q5 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A2Q6       TCGA-DJ-A2Q7       TCGA-DJ-A2Q8       TCGA-DJ-A2Q9 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A2QA       TCGA-DJ-A2QB       TCGA-DJ-A2QC       TCGA-DO-A1JZ 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DO-A1K0       TCGA-E3-A3DY       TCGA-E3-A3DZ       TCGA-E3-A3E0 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-E3-A3E1       TCGA-E3-A3E3       TCGA-E3-A3E5       TCGA-E8-A2EA 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3CL       TCGA-EL-A3CM       TCGA-EL-A3CN       TCGA-EL-A3CO 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3CP       TCGA-EL-A3CR       TCGA-EL-A3CS       TCGA-EL-A3CT 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3CU       TCGA-EL-A3CV       TCGA-EL-A3CW       TCGA-EL-A3CX 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3CY       TCGA-EL-A3CZ       TCGA-EL-A3D0       TCGA-EL-A3D1 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3D4       TCGA-EL-A3D5       TCGA-EL-A3D6       TCGA-EL-A3GO 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3GP       TCGA-EL-A3GQ       TCGA-EL-A3GR       TCGA-EL-A3GS 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3GU       TCGA-EL-A3GV       TCGA-EL-A3GW       TCGA-EL-A3GX 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3GY       TCGA-EL-A3GZ       TCGA-EL-A3H1       TCGA-EL-A3H2 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3H3       TCGA-EL-A3H4       TCGA-EL-A3H5       TCGA-EL-A3H7 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3H8       TCGA-EL-A3MW       TCGA-EL-A3MX       TCGA-EL-A3MY 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3MZ       TCGA-EL-A3N2       TCGA-EL-A3N3       TCGA-EM-A1CT 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A1CU       TCGA-EM-A1CV       TCGA-EM-A1CW       TCGA-EM-A1YA 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A1YB       TCGA-EM-A1YC       TCGA-EM-A1YD       TCGA-EM-A1YE 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A22I       TCGA-EM-A22J       TCGA-EM-A22L       TCGA-EM-A22M 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A22O       TCGA-EM-A22Q       TCGA-EM-A2CJ       TCGA-EM-A2CK 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A2CL       TCGA-EM-A2CM       TCGA-EM-A2CN       TCGA-EM-A2CO 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A2CP       TCGA-EM-A2CQ       TCGA-EM-A2CR       TCGA-EM-A2CU 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A2OV       TCGA-EM-A2OY       TCGA-EM-A2P1       TCGA-EM-A3AI 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A3AJ       TCGA-EM-A3AL       TCGA-EM-A3AN       TCGA-EM-A3AO 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A3FJ       TCGA-EM-A3FL       TCGA-EM-A3FN       TCGA-EM-A3FO 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A3FP       TCGA-ET-A25G       TCGA-ET-A25O       TCGA-ET-A2MY 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A2MZ       TCGA-ET-A2N0       TCGA-ET-A2N1       TCGA-ET-A2N4 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A2N5       TCGA-ET-A39I       TCGA-ET-A39J       TCGA-ET-A39L 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A39M       TCGA-ET-A39N       TCGA-ET-A39P       TCGA-ET-A39R 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A39T       TCGA-ET-A3BN       TCGA-ET-A3BP       TCGA-ET-A3BS 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A3BT       TCGA-ET-A3BU       TCGA-ET-A3BV       TCGA-ET-A3BW 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A3BX       TCGA-ET-A3DO       TCGA-ET-A3DP       TCGA-ET-A3DS 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A3DT       TCGA-ET-A3DV       TCGA-ET-A3DW       TCGA-FE-A22Z 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-FE-A230       TCGA-FE-A231       TCGA-FE-A232       TCGA-FE-A233 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-FE-A234       TCGA-FE-A235       TCGA-FE-A236       TCGA-FE-A237 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-FE-A23A       TCGA-FY-A2QD       TCGA-FY-A3BL       TCGA-FY-A3ON 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-GE-A2C6       TCGA-H2-A2K9       TCGA-IM-A3EB       TCGA-IM-A3ED 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-J8-A3NZ       TCGA-J8-A3O0       TCGA-J8-A3O1 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
D13V4, multiclass
[1] "Remove cluster labels:" "R3HDM2 MUTATED"        
clus
  R3HDM2 MUTATED R3HDM2 WILD-TYPE 
               2              215 
      TCGA-BJ-A0YZ       TCGA-BJ-A0Z0       TCGA-BJ-A0Z2       TCGA-BJ-A0Z3 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A0Z5       TCGA-BJ-A0Z9       TCGA-BJ-A0ZA       TCGA-BJ-A0ZB 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A0ZC       TCGA-BJ-A0ZE       TCGA-BJ-A0ZF       TCGA-BJ-A0ZG 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A0ZJ       TCGA-BJ-A18Y       TCGA-BJ-A18Z       TCGA-BJ-A191 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A192       TCGA-BJ-A28R       TCGA-BJ-A28S       TCGA-BJ-A28T 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A28V       TCGA-BJ-A28Z       TCGA-BJ-A290       TCGA-BJ-A2N7 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A2N9       TCGA-BJ-A2NA       TCGA-BJ-A2P4       TCGA-BJ-A3EZ 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-BJ-A3F0       TCGA-CE-A13K       TCGA-CE-A27D       TCGA-CE-A3MD 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-CE-A3ME       TCGA-DE-A0Y2       TCGA-DE-A2OL       TCGA-DE-A3KN 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A13M       TCGA-DJ-A13O       TCGA-DJ-A13R       TCGA-DJ-A13S 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A13V       TCGA-DJ-A13W       TCGA-DJ-A13X       TCGA-DJ-A1QD 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A1QE       TCGA-DJ-A1QF       TCGA-DJ-A1QG       TCGA-DJ-A1QI 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A1QL       TCGA-DJ-A1QM       TCGA-DJ-A1QN       TCGA-DJ-A1QO 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A2PN       TCGA-DJ-A2PO       TCGA-DJ-A2PP       TCGA-DJ-A2PQ 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A2PR       TCGA-DJ-A2PS       TCGA-DJ-A2PU       TCGA-DJ-A2PV 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A2PW       TCGA-DJ-A2PY       TCGA-DJ-A2PZ       TCGA-DJ-A2Q0 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A2Q1       TCGA-DJ-A2Q2       TCGA-DJ-A2Q4       TCGA-DJ-A2Q5 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A2Q6       TCGA-DJ-A2Q7       TCGA-DJ-A2Q8       TCGA-DJ-A2Q9 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DJ-A2QA       TCGA-DJ-A2QB       TCGA-DJ-A2QC       TCGA-DO-A1JZ 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-DO-A1K0       TCGA-E3-A3DY       TCGA-E3-A3DZ       TCGA-E3-A3E0 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-E3-A3E1       TCGA-E3-A3E3       TCGA-E3-A3E5       TCGA-E8-A2EA 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3CL       TCGA-EL-A3CM       TCGA-EL-A3CN       TCGA-EL-A3CO 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3CP       TCGA-EL-A3CR       TCGA-EL-A3CS       TCGA-EL-A3CT 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3CU       TCGA-EL-A3CV       TCGA-EL-A3CW       TCGA-EL-A3CX 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3CY       TCGA-EL-A3CZ       TCGA-EL-A3D0       TCGA-EL-A3D1 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3D4       TCGA-EL-A3D5       TCGA-EL-A3D6       TCGA-EL-A3GO 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3GP       TCGA-EL-A3GQ       TCGA-EL-A3GR       TCGA-EL-A3GS 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3GU       TCGA-EL-A3GV       TCGA-EL-A3GW       TCGA-EL-A3GX 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3GY       TCGA-EL-A3GZ       TCGA-EL-A3H1       TCGA-EL-A3H2 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3H3       TCGA-EL-A3H4       TCGA-EL-A3H5       TCGA-EL-A3H7 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3H8       TCGA-EL-A3MW       TCGA-EL-A3MX       TCGA-EL-A3MY 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EL-A3MZ       TCGA-EL-A3N2       TCGA-EL-A3N3       TCGA-EM-A1CT 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A1CU       TCGA-EM-A1CV       TCGA-EM-A1CW       TCGA-EM-A1YA 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A1YB       TCGA-EM-A1YC       TCGA-EM-A1YD       TCGA-EM-A1YE 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A22I       TCGA-EM-A22J       TCGA-EM-A22L       TCGA-EM-A22M 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A22O       TCGA-EM-A22Q       TCGA-EM-A2CJ       TCGA-EM-A2CK 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A2CL       TCGA-EM-A2CM       TCGA-EM-A2CN       TCGA-EM-A2CO 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A2CP       TCGA-EM-A2CQ       TCGA-EM-A2CR       TCGA-EM-A2CU 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A2OV       TCGA-EM-A2OY       TCGA-EM-A2P1       TCGA-EM-A3AI 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A3AJ       TCGA-EM-A3AL       TCGA-EM-A3AN       TCGA-EM-A3AO 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A3FJ       TCGA-EM-A3FL       TCGA-EM-A3FN       TCGA-EM-A3FO 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-EM-A3FP       TCGA-ET-A25G       TCGA-ET-A25O       TCGA-ET-A2MY 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A2MZ       TCGA-ET-A2N0       TCGA-ET-A2N1       TCGA-ET-A2N4 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A2N5       TCGA-ET-A39I       TCGA-ET-A39J       TCGA-ET-A39L 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A39M       TCGA-ET-A39N       TCGA-ET-A39P       TCGA-ET-A39R 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A39T       TCGA-ET-A3BN       TCGA-ET-A3BP       TCGA-ET-A3BS 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A3BT       TCGA-ET-A3BU       TCGA-ET-A3BV       TCGA-ET-A3BW 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A3BX       TCGA-ET-A3DO       TCGA-ET-A3DP       TCGA-ET-A3DS 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-ET-A3DT       TCGA-ET-A3DV       TCGA-ET-A3DW       TCGA-FE-A22Z 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-FE-A230       TCGA-FE-A231       TCGA-FE-A232       TCGA-FE-A233 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-FE-A234       TCGA-FE-A235       TCGA-FE-A236       TCGA-FE-A237 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-FE-A23A       TCGA-FY-A2QD       TCGA-FY-A3BL       TCGA-FY-A3ON 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-GE-A2C6       TCGA-H2-A2K9       TCGA-IM-A3EB       TCGA-IM-A3ED 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
      TCGA-J8-A3NZ       TCGA-J8-A3O0       TCGA-J8-A3O1 
"R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" "R3HDM2 WILD-TYPE" 
D13V5, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              4               98
  CLUS_2              0               36
  CLUS_3              0               70
  CLUS_4              0               95
D13V6, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              4              106
  CLUS_2              0              136
  CLUS_3              0               57
D13V7, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              4              101
  CLUS_2              0              116
  CLUS_3              0              101
D13V8, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              4               93
  CLUS_2              0              122
  CLUS_3              0              103

Clustering(14) Variable = IL32 MUTATION ANALYSIS
D14V1, multiclass
        clus
vv       IL32 MUTATED IL32 WILD-TYPE
  CLUS_1            0             26
  CLUS_2            3            241
  CLUS_3            0             48
D14V2, multiclass
        clus
vv       IL32 MUTATED IL32 WILD-TYPE
  CLUS_1            1            104
  CLUS_2            1             43
  CLUS_3            1            173
D14V3, multiclass
[1] "Remove cluster labels:" "IL32 MUTATED"          
clus
  IL32 MUTATED IL32 WILD-TYPE 
             2            215 
    TCGA-BJ-A0YZ     TCGA-BJ-A0Z0     TCGA-BJ-A0Z2     TCGA-BJ-A0Z3 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A0Z5     TCGA-BJ-A0Z9     TCGA-BJ-A0ZA     TCGA-BJ-A0ZB 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A0ZC     TCGA-BJ-A0ZE     TCGA-BJ-A0ZF     TCGA-BJ-A0ZG 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A0ZJ     TCGA-BJ-A18Y     TCGA-BJ-A18Z     TCGA-BJ-A190 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A191     TCGA-BJ-A192     TCGA-BJ-A28R     TCGA-BJ-A28S 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A28T     TCGA-BJ-A28V     TCGA-BJ-A28Z     TCGA-BJ-A290 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A2N7     TCGA-BJ-A2N9     TCGA-BJ-A2NA     TCGA-BJ-A2P4 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A3EZ     TCGA-BJ-A3F0     TCGA-CE-A13K     TCGA-CE-A27D 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-CE-A3MD     TCGA-CE-A3ME     TCGA-DE-A0Y2     TCGA-DE-A3KN 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A13M     TCGA-DJ-A13O     TCGA-DJ-A13R     TCGA-DJ-A13S 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A13V     TCGA-DJ-A13W     TCGA-DJ-A13X     TCGA-DJ-A1QD 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A1QE     TCGA-DJ-A1QF     TCGA-DJ-A1QG     TCGA-DJ-A1QI 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A1QL     TCGA-DJ-A1QM     TCGA-DJ-A1QN     TCGA-DJ-A1QO 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A2PN     TCGA-DJ-A2PO     TCGA-DJ-A2PP     TCGA-DJ-A2PQ 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A2PR     TCGA-DJ-A2PS     TCGA-DJ-A2PU     TCGA-DJ-A2PV 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A2PW     TCGA-DJ-A2PY     TCGA-DJ-A2PZ     TCGA-DJ-A2Q0 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A2Q1     TCGA-DJ-A2Q2     TCGA-DJ-A2Q4     TCGA-DJ-A2Q5 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A2Q6     TCGA-DJ-A2Q7     TCGA-DJ-A2Q8     TCGA-DJ-A2Q9 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A2QA     TCGA-DJ-A2QB     TCGA-DJ-A2QC     TCGA-DO-A1JZ 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DO-A1K0     TCGA-E3-A3DY     TCGA-E3-A3DZ     TCGA-E3-A3E0 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-E3-A3E1     TCGA-E3-A3E3     TCGA-E3-A3E5     TCGA-E8-A2EA 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3CL     TCGA-EL-A3CM     TCGA-EL-A3CN     TCGA-EL-A3CO 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3CP     TCGA-EL-A3CR     TCGA-EL-A3CS     TCGA-EL-A3CT 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3CU     TCGA-EL-A3CV     TCGA-EL-A3CW     TCGA-EL-A3CX 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3CY     TCGA-EL-A3CZ     TCGA-EL-A3D0     TCGA-EL-A3D1 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3D4     TCGA-EL-A3D5     TCGA-EL-A3D6     TCGA-EL-A3GO 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3GP     TCGA-EL-A3GQ     TCGA-EL-A3GR     TCGA-EL-A3GS 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3GU     TCGA-EL-A3GV     TCGA-EL-A3GW     TCGA-EL-A3GX 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3GY     TCGA-EL-A3H1     TCGA-EL-A3H2     TCGA-EL-A3H3 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3H4     TCGA-EL-A3H5     TCGA-EL-A3H7     TCGA-EL-A3H8 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3MW     TCGA-EL-A3MX     TCGA-EL-A3MY     TCGA-EL-A3MZ 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3N2     TCGA-EL-A3N3     TCGA-EM-A1CT     TCGA-EM-A1CU 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A1CV     TCGA-EM-A1CW     TCGA-EM-A1YA     TCGA-EM-A1YB 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A1YC     TCGA-EM-A1YD     TCGA-EM-A1YE     TCGA-EM-A22I 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A22J     TCGA-EM-A22L     TCGA-EM-A22M     TCGA-EM-A22O 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A22Q     TCGA-EM-A2CJ     TCGA-EM-A2CK     TCGA-EM-A2CL 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A2CM     TCGA-EM-A2CN     TCGA-EM-A2CO     TCGA-EM-A2CP 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A2CQ     TCGA-EM-A2CR     TCGA-EM-A2CU     TCGA-EM-A2OV 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A2OY     TCGA-EM-A2P1     TCGA-EM-A3AI     TCGA-EM-A3AJ 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A3AL     TCGA-EM-A3AN     TCGA-EM-A3AO     TCGA-EM-A3AP 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A3FJ     TCGA-EM-A3FL     TCGA-EM-A3FN     TCGA-EM-A3FO 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A3FP     TCGA-ET-A25G     TCGA-ET-A25O     TCGA-ET-A2MY 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A2MZ     TCGA-ET-A2N0     TCGA-ET-A2N1     TCGA-ET-A2N4 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A2N5     TCGA-ET-A39I     TCGA-ET-A39J     TCGA-ET-A39L 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A39M     TCGA-ET-A39N     TCGA-ET-A39P     TCGA-ET-A39R 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A39T     TCGA-ET-A3BN     TCGA-ET-A3BP     TCGA-ET-A3BS 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A3BT     TCGA-ET-A3BU     TCGA-ET-A3BV     TCGA-ET-A3BW 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A3BX     TCGA-ET-A3DO     TCGA-ET-A3DP     TCGA-ET-A3DS 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A3DT     TCGA-ET-A3DV     TCGA-ET-A3DW     TCGA-FE-A22Z 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FE-A230     TCGA-FE-A231     TCGA-FE-A232     TCGA-FE-A233 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FE-A234     TCGA-FE-A235     TCGA-FE-A236     TCGA-FE-A237 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FE-A23A     TCGA-FY-A2QD     TCGA-FY-A3BL     TCGA-FY-A3ON 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-GE-A2C6     TCGA-H2-A2K9     TCGA-IM-A3EB     TCGA-IM-A3ED 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-J8-A3NZ     TCGA-J8-A3O0     TCGA-J8-A3O1 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
D14V4, multiclass
[1] "Remove cluster labels:" "IL32 MUTATED"          
clus
  IL32 MUTATED IL32 WILD-TYPE 
             2            215 
    TCGA-BJ-A0YZ     TCGA-BJ-A0Z0     TCGA-BJ-A0Z2     TCGA-BJ-A0Z3 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A0Z5     TCGA-BJ-A0Z9     TCGA-BJ-A0ZA     TCGA-BJ-A0ZB 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A0ZC     TCGA-BJ-A0ZE     TCGA-BJ-A0ZF     TCGA-BJ-A0ZG 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A0ZJ     TCGA-BJ-A18Y     TCGA-BJ-A18Z     TCGA-BJ-A190 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A191     TCGA-BJ-A192     TCGA-BJ-A28R     TCGA-BJ-A28S 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A28T     TCGA-BJ-A28V     TCGA-BJ-A28Z     TCGA-BJ-A290 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A2N7     TCGA-BJ-A2N9     TCGA-BJ-A2NA     TCGA-BJ-A2P4 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-BJ-A3EZ     TCGA-BJ-A3F0     TCGA-CE-A13K     TCGA-CE-A27D 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-CE-A3MD     TCGA-CE-A3ME     TCGA-DE-A0Y2     TCGA-DE-A3KN 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A13M     TCGA-DJ-A13O     TCGA-DJ-A13R     TCGA-DJ-A13S 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A13V     TCGA-DJ-A13W     TCGA-DJ-A13X     TCGA-DJ-A1QD 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A1QE     TCGA-DJ-A1QF     TCGA-DJ-A1QG     TCGA-DJ-A1QI 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A1QL     TCGA-DJ-A1QM     TCGA-DJ-A1QN     TCGA-DJ-A1QO 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A2PN     TCGA-DJ-A2PO     TCGA-DJ-A2PP     TCGA-DJ-A2PQ 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A2PR     TCGA-DJ-A2PS     TCGA-DJ-A2PU     TCGA-DJ-A2PV 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A2PW     TCGA-DJ-A2PY     TCGA-DJ-A2PZ     TCGA-DJ-A2Q0 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A2Q1     TCGA-DJ-A2Q2     TCGA-DJ-A2Q4     TCGA-DJ-A2Q5 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A2Q6     TCGA-DJ-A2Q7     TCGA-DJ-A2Q8     TCGA-DJ-A2Q9 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DJ-A2QA     TCGA-DJ-A2QB     TCGA-DJ-A2QC     TCGA-DO-A1JZ 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DO-A1K0     TCGA-E3-A3DY     TCGA-E3-A3DZ     TCGA-E3-A3E0 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-E3-A3E1     TCGA-E3-A3E3     TCGA-E3-A3E5     TCGA-E8-A2EA 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3CL     TCGA-EL-A3CM     TCGA-EL-A3CN     TCGA-EL-A3CO 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3CP     TCGA-EL-A3CR     TCGA-EL-A3CS     TCGA-EL-A3CT 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3CU     TCGA-EL-A3CV     TCGA-EL-A3CW     TCGA-EL-A3CX 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3CY     TCGA-EL-A3CZ     TCGA-EL-A3D0     TCGA-EL-A3D1 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3D4     TCGA-EL-A3D5     TCGA-EL-A3D6     TCGA-EL-A3GO 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3GP     TCGA-EL-A3GQ     TCGA-EL-A3GR     TCGA-EL-A3GS 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3GU     TCGA-EL-A3GV     TCGA-EL-A3GW     TCGA-EL-A3GX 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3GY     TCGA-EL-A3H1     TCGA-EL-A3H2     TCGA-EL-A3H3 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3H4     TCGA-EL-A3H5     TCGA-EL-A3H7     TCGA-EL-A3H8 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3MW     TCGA-EL-A3MX     TCGA-EL-A3MY     TCGA-EL-A3MZ 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EL-A3N2     TCGA-EL-A3N3     TCGA-EM-A1CT     TCGA-EM-A1CU 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A1CV     TCGA-EM-A1CW     TCGA-EM-A1YA     TCGA-EM-A1YB 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A1YC     TCGA-EM-A1YD     TCGA-EM-A1YE     TCGA-EM-A22I 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A22J     TCGA-EM-A22L     TCGA-EM-A22M     TCGA-EM-A22O 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A22Q     TCGA-EM-A2CJ     TCGA-EM-A2CK     TCGA-EM-A2CL 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A2CM     TCGA-EM-A2CN     TCGA-EM-A2CO     TCGA-EM-A2CP 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A2CQ     TCGA-EM-A2CR     TCGA-EM-A2CU     TCGA-EM-A2OV 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A2OY     TCGA-EM-A2P1     TCGA-EM-A3AI     TCGA-EM-A3AJ 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A3AL     TCGA-EM-A3AN     TCGA-EM-A3AO     TCGA-EM-A3AP 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A3FJ     TCGA-EM-A3FL     TCGA-EM-A3FN     TCGA-EM-A3FO 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EM-A3FP     TCGA-ET-A25G     TCGA-ET-A25O     TCGA-ET-A2MY 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A2MZ     TCGA-ET-A2N0     TCGA-ET-A2N1     TCGA-ET-A2N4 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A2N5     TCGA-ET-A39I     TCGA-ET-A39J     TCGA-ET-A39L 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A39M     TCGA-ET-A39N     TCGA-ET-A39P     TCGA-ET-A39R 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A39T     TCGA-ET-A3BN     TCGA-ET-A3BP     TCGA-ET-A3BS 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A3BT     TCGA-ET-A3BU     TCGA-ET-A3BV     TCGA-ET-A3BW 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A3BX     TCGA-ET-A3DO     TCGA-ET-A3DP     TCGA-ET-A3DS 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ET-A3DT     TCGA-ET-A3DV     TCGA-ET-A3DW     TCGA-FE-A22Z 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FE-A230     TCGA-FE-A231     TCGA-FE-A232     TCGA-FE-A233 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FE-A234     TCGA-FE-A235     TCGA-FE-A236     TCGA-FE-A237 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FE-A23A     TCGA-FY-A2QD     TCGA-FY-A3BL     TCGA-FY-A3ON 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-GE-A2C6     TCGA-H2-A2K9     TCGA-IM-A3EB     TCGA-IM-A3ED 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-J8-A3NZ     TCGA-J8-A3O0     TCGA-J8-A3O1 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
D14V5, multiclass
        clus
vv       IL32 MUTATED IL32 WILD-TYPE
  CLUS_1            1            101
  CLUS_2            0             36
  CLUS_3            1             69
  CLUS_4            1             94
D14V6, multiclass
        clus
vv       IL32 MUTATED IL32 WILD-TYPE
  CLUS_1            1            109
  CLUS_2            1            135
  CLUS_3            1             56
D14V7, multiclass
        clus
vv       IL32 MUTATED IL32 WILD-TYPE
  CLUS_1            1            104
  CLUS_2            0            116
  CLUS_3            2             99
D14V8, multiclass
        clus
vv       IL32 MUTATED IL32 WILD-TYPE
  CLUS_1            1             96
  CLUS_2            2            120
  CLUS_3            0            103

Clustering(15) Variable = TMCO2 MUTATION ANALYSIS
D15V1, multiclass
        clus
vv       TMCO2 MUTATED TMCO2 WILD-TYPE
  CLUS_1             0              26
  CLUS_2             3             241
  CLUS_3             0              48
D15V2, multiclass
        clus
vv       TMCO2 MUTATED TMCO2 WILD-TYPE
  CLUS_1             0             105
  CLUS_2             0              44
  CLUS_3             3             171
D15V3, multiclass
        clus
vv       TMCO2 MUTATED TMCO2 WILD-TYPE
  CLUS_1             0              63
  CLUS_2             1              74
  CLUS_3             2              77
D15V4, multiclass
        clus
vv       TMCO2 MUTATED TMCO2 WILD-TYPE
  CLUS_1             1              26
  CLUS_2             2              93
  CLUS_3             0              95
D15V5, multiclass
        clus
vv       TMCO2 MUTATED TMCO2 WILD-TYPE
  CLUS_1             0             102
  CLUS_2             0              36
  CLUS_3             1              69
  CLUS_4             2              93
D15V6, multiclass
        clus
vv       TMCO2 MUTATED TMCO2 WILD-TYPE
  CLUS_1             0             110
  CLUS_2             3             133
  CLUS_3             0              57
D15V7, multiclass
        clus
vv       TMCO2 MUTATED TMCO2 WILD-TYPE
  CLUS_1             0             105
  CLUS_2             1             115
  CLUS_3             2              99
D15V8, multiclass
        clus
vv       TMCO2 MUTATED TMCO2 WILD-TYPE
  CLUS_1             0              97
  CLUS_2             2             120
  CLUS_3             1             102

Clustering(16) Variable = PPTC7 MUTATION ANALYSIS
D16V1, multiclass
        clus
vv       PPTC7 MUTATED PPTC7 WILD-TYPE
  CLUS_1             0              26
  CLUS_2             1             243
  CLUS_3             2              46
D16V2, multiclass
        clus
vv       PPTC7 MUTATED PPTC7 WILD-TYPE
  CLUS_1             3             102
  CLUS_2             0              44
  CLUS_3             0             174
D16V3, multiclass
[1] "Remove cluster labels:" "PPTC7 MUTATED"         
clus
  PPTC7 MUTATED PPTC7 WILD-TYPE 
              2             215 
     TCGA-BJ-A0YZ      TCGA-BJ-A0Z0      TCGA-BJ-A0Z2      TCGA-BJ-A0Z3 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A0Z5      TCGA-BJ-A0Z9      TCGA-BJ-A0ZA      TCGA-BJ-A0ZB 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A0ZC      TCGA-BJ-A0ZE      TCGA-BJ-A0ZF      TCGA-BJ-A0ZG 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A0ZJ      TCGA-BJ-A18Y      TCGA-BJ-A18Z      TCGA-BJ-A190 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A191      TCGA-BJ-A192      TCGA-BJ-A28R      TCGA-BJ-A28S 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A28T      TCGA-BJ-A28V      TCGA-BJ-A28Z      TCGA-BJ-A290 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A2N7      TCGA-BJ-A2N9      TCGA-BJ-A2NA      TCGA-BJ-A2P4 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A3EZ      TCGA-BJ-A3F0      TCGA-CE-A13K      TCGA-CE-A27D 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-CE-A3MD      TCGA-CE-A3ME      TCGA-DE-A0Y2      TCGA-DE-A2OL 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DE-A3KN      TCGA-DJ-A13M      TCGA-DJ-A13O      TCGA-DJ-A13R 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A13S      TCGA-DJ-A13V      TCGA-DJ-A13W      TCGA-DJ-A13X 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A1QD      TCGA-DJ-A1QE      TCGA-DJ-A1QF      TCGA-DJ-A1QG 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A1QI      TCGA-DJ-A1QL      TCGA-DJ-A1QM      TCGA-DJ-A1QN 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A1QO      TCGA-DJ-A2PN      TCGA-DJ-A2PO      TCGA-DJ-A2PP 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A2PQ      TCGA-DJ-A2PR      TCGA-DJ-A2PS      TCGA-DJ-A2PU 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A2PV      TCGA-DJ-A2PW      TCGA-DJ-A2PY      TCGA-DJ-A2PZ 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A2Q0      TCGA-DJ-A2Q1      TCGA-DJ-A2Q2      TCGA-DJ-A2Q4 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A2Q5      TCGA-DJ-A2Q6      TCGA-DJ-A2Q7      TCGA-DJ-A2Q8 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A2Q9      TCGA-DJ-A2QA      TCGA-DJ-A2QB      TCGA-DJ-A2QC 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DO-A1JZ      TCGA-DO-A1K0      TCGA-E3-A3DY      TCGA-E3-A3E0 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-E3-A3E1      TCGA-E3-A3E3      TCGA-E3-A3E5      TCGA-E8-A2EA 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3CL      TCGA-EL-A3CM      TCGA-EL-A3CN      TCGA-EL-A3CO 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3CP      TCGA-EL-A3CR      TCGA-EL-A3CS      TCGA-EL-A3CT 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3CU      TCGA-EL-A3CV      TCGA-EL-A3CW      TCGA-EL-A3CX 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3CY      TCGA-EL-A3CZ      TCGA-EL-A3D0      TCGA-EL-A3D1 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3D4      TCGA-EL-A3D5      TCGA-EL-A3D6      TCGA-EL-A3GO 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3GP      TCGA-EL-A3GQ      TCGA-EL-A3GR      TCGA-EL-A3GS 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3GU      TCGA-EL-A3GV      TCGA-EL-A3GW      TCGA-EL-A3GX 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3GY      TCGA-EL-A3GZ      TCGA-EL-A3H1      TCGA-EL-A3H2 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3H3      TCGA-EL-A3H4      TCGA-EL-A3H5      TCGA-EL-A3H7 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3H8      TCGA-EL-A3MW      TCGA-EL-A3MX      TCGA-EL-A3MY 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3MZ      TCGA-EL-A3N2      TCGA-EL-A3N3      TCGA-EM-A1CT 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A1CU      TCGA-EM-A1CV      TCGA-EM-A1CW      TCGA-EM-A1YA 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A1YB      TCGA-EM-A1YC      TCGA-EM-A1YD      TCGA-EM-A1YE 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A22I      TCGA-EM-A22J      TCGA-EM-A22L      TCGA-EM-A22M 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A22O      TCGA-EM-A22Q      TCGA-EM-A2CJ      TCGA-EM-A2CK 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A2CL      TCGA-EM-A2CM      TCGA-EM-A2CN      TCGA-EM-A2CO 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A2CP      TCGA-EM-A2CQ      TCGA-EM-A2CR      TCGA-EM-A2CU 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A2OV      TCGA-EM-A2OY      TCGA-EM-A2P1      TCGA-EM-A3AI 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A3AJ      TCGA-EM-A3AL      TCGA-EM-A3AN      TCGA-EM-A3AO 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A3AP      TCGA-EM-A3FJ      TCGA-EM-A3FL      TCGA-EM-A3FN 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A3FO      TCGA-EM-A3FP      TCGA-ET-A25G      TCGA-ET-A25O 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A2MY      TCGA-ET-A2MZ      TCGA-ET-A2N0      TCGA-ET-A2N1 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A2N4      TCGA-ET-A2N5      TCGA-ET-A39I      TCGA-ET-A39J 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A39L      TCGA-ET-A39M      TCGA-ET-A39N      TCGA-ET-A39P 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A39R      TCGA-ET-A39T      TCGA-ET-A3BN      TCGA-ET-A3BP 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A3BS      TCGA-ET-A3BT      TCGA-ET-A3BU      TCGA-ET-A3BV 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A3BW      TCGA-ET-A3BX      TCGA-ET-A3DO      TCGA-ET-A3DP 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A3DS      TCGA-ET-A3DT      TCGA-ET-A3DV      TCGA-ET-A3DW 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-FE-A22Z      TCGA-FE-A230      TCGA-FE-A231      TCGA-FE-A232 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-FE-A233      TCGA-FE-A234      TCGA-FE-A235      TCGA-FE-A236 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-FE-A237      TCGA-FE-A23A      TCGA-FY-A2QD      TCGA-FY-A3BL 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-FY-A3ON      TCGA-GE-A2C6      TCGA-H2-A2K9      TCGA-IM-A3EB 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-IM-A3ED      TCGA-J8-A3NZ      TCGA-J8-A3O1 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
D16V4, multiclass
[1] "Remove cluster labels:" "PPTC7 MUTATED"         
clus
  PPTC7 MUTATED PPTC7 WILD-TYPE 
              2             215 
     TCGA-BJ-A0YZ      TCGA-BJ-A0Z0      TCGA-BJ-A0Z2      TCGA-BJ-A0Z3 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A0Z5      TCGA-BJ-A0Z9      TCGA-BJ-A0ZA      TCGA-BJ-A0ZB 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A0ZC      TCGA-BJ-A0ZE      TCGA-BJ-A0ZF      TCGA-BJ-A0ZG 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A0ZJ      TCGA-BJ-A18Y      TCGA-BJ-A18Z      TCGA-BJ-A190 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A191      TCGA-BJ-A192      TCGA-BJ-A28R      TCGA-BJ-A28S 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A28T      TCGA-BJ-A28V      TCGA-BJ-A28Z      TCGA-BJ-A290 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A2N7      TCGA-BJ-A2N9      TCGA-BJ-A2NA      TCGA-BJ-A2P4 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-BJ-A3EZ      TCGA-BJ-A3F0      TCGA-CE-A13K      TCGA-CE-A27D 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-CE-A3MD      TCGA-CE-A3ME      TCGA-DE-A0Y2      TCGA-DE-A2OL 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DE-A3KN      TCGA-DJ-A13M      TCGA-DJ-A13O      TCGA-DJ-A13R 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A13S      TCGA-DJ-A13V      TCGA-DJ-A13W      TCGA-DJ-A13X 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A1QD      TCGA-DJ-A1QE      TCGA-DJ-A1QF      TCGA-DJ-A1QG 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A1QI      TCGA-DJ-A1QL      TCGA-DJ-A1QM      TCGA-DJ-A1QN 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A1QO      TCGA-DJ-A2PN      TCGA-DJ-A2PO      TCGA-DJ-A2PP 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A2PQ      TCGA-DJ-A2PR      TCGA-DJ-A2PS      TCGA-DJ-A2PU 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A2PV      TCGA-DJ-A2PW      TCGA-DJ-A2PY      TCGA-DJ-A2PZ 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A2Q0      TCGA-DJ-A2Q1      TCGA-DJ-A2Q2      TCGA-DJ-A2Q4 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A2Q5      TCGA-DJ-A2Q6      TCGA-DJ-A2Q7      TCGA-DJ-A2Q8 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DJ-A2Q9      TCGA-DJ-A2QA      TCGA-DJ-A2QB      TCGA-DJ-A2QC 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-DO-A1JZ      TCGA-DO-A1K0      TCGA-E3-A3DY      TCGA-E3-A3E0 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-E3-A3E1      TCGA-E3-A3E3      TCGA-E3-A3E5      TCGA-E8-A2EA 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3CL      TCGA-EL-A3CM      TCGA-EL-A3CN      TCGA-EL-A3CO 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3CP      TCGA-EL-A3CR      TCGA-EL-A3CS      TCGA-EL-A3CT 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3CU      TCGA-EL-A3CV      TCGA-EL-A3CW      TCGA-EL-A3CX 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3CY      TCGA-EL-A3CZ      TCGA-EL-A3D0      TCGA-EL-A3D1 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3D4      TCGA-EL-A3D5      TCGA-EL-A3D6      TCGA-EL-A3GO 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3GP      TCGA-EL-A3GQ      TCGA-EL-A3GR      TCGA-EL-A3GS 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3GU      TCGA-EL-A3GV      TCGA-EL-A3GW      TCGA-EL-A3GX 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3GY      TCGA-EL-A3GZ      TCGA-EL-A3H1      TCGA-EL-A3H2 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3H3      TCGA-EL-A3H4      TCGA-EL-A3H5      TCGA-EL-A3H7 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3H8      TCGA-EL-A3MW      TCGA-EL-A3MX      TCGA-EL-A3MY 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EL-A3MZ      TCGA-EL-A3N2      TCGA-EL-A3N3      TCGA-EM-A1CT 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A1CU      TCGA-EM-A1CV      TCGA-EM-A1CW      TCGA-EM-A1YA 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A1YB      TCGA-EM-A1YC      TCGA-EM-A1YD      TCGA-EM-A1YE 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A22I      TCGA-EM-A22J      TCGA-EM-A22L      TCGA-EM-A22M 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A22O      TCGA-EM-A22Q      TCGA-EM-A2CJ      TCGA-EM-A2CK 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A2CL      TCGA-EM-A2CM      TCGA-EM-A2CN      TCGA-EM-A2CO 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A2CP      TCGA-EM-A2CQ      TCGA-EM-A2CR      TCGA-EM-A2CU 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A2OV      TCGA-EM-A2OY      TCGA-EM-A2P1      TCGA-EM-A3AI 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A3AJ      TCGA-EM-A3AL      TCGA-EM-A3AN      TCGA-EM-A3AO 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A3AP      TCGA-EM-A3FJ      TCGA-EM-A3FL      TCGA-EM-A3FN 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-EM-A3FO      TCGA-EM-A3FP      TCGA-ET-A25G      TCGA-ET-A25O 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A2MY      TCGA-ET-A2MZ      TCGA-ET-A2N0      TCGA-ET-A2N1 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A2N4      TCGA-ET-A2N5      TCGA-ET-A39I      TCGA-ET-A39J 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A39L      TCGA-ET-A39M      TCGA-ET-A39N      TCGA-ET-A39P 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A39R      TCGA-ET-A39T      TCGA-ET-A3BN      TCGA-ET-A3BP 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A3BS      TCGA-ET-A3BT      TCGA-ET-A3BU      TCGA-ET-A3BV 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A3BW      TCGA-ET-A3BX      TCGA-ET-A3DO      TCGA-ET-A3DP 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-ET-A3DS      TCGA-ET-A3DT      TCGA-ET-A3DV      TCGA-ET-A3DW 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-FE-A22Z      TCGA-FE-A230      TCGA-FE-A231      TCGA-FE-A232 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-FE-A233      TCGA-FE-A234      TCGA-FE-A235      TCGA-FE-A236 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-FE-A237      TCGA-FE-A23A      TCGA-FY-A2QD      TCGA-FY-A3BL 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-FY-A3ON      TCGA-GE-A2C6      TCGA-H2-A2K9      TCGA-IM-A3EB 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
     TCGA-IM-A3ED      TCGA-J8-A3NZ      TCGA-J8-A3O1 
"PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" "PPTC7 WILD-TYPE" 
D16V5, multiclass
        clus
vv       PPTC7 MUTATED PPTC7 WILD-TYPE
  CLUS_1             3              99
  CLUS_2             0              36
  CLUS_3             0              70
  CLUS_4             0              95
D16V6, multiclass
        clus
vv       PPTC7 MUTATED PPTC7 WILD-TYPE
  CLUS_1             3             107
  CLUS_2             0             136
  CLUS_3             0              57
D16V7, multiclass
        clus
vv       PPTC7 MUTATED PPTC7 WILD-TYPE
  CLUS_1             2             103
  CLUS_2             0             116
  CLUS_3             1             100
D16V8, multiclass
        clus
vv       PPTC7 MUTATED PPTC7 WILD-TYPE
  CLUS_1             2              95
  CLUS_2             1             121
  CLUS_3             0             103

Clustering(17) Variable = MUC7 MUTATION ANALYSIS
D17V1, multiclass
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            0             26
  CLUS_2            5            239
  CLUS_3            0             48
D17V2, multiclass
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            1            104
  CLUS_2            2             42
  CLUS_3            2            172
D17V3, multiclass
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            2             61
  CLUS_2            1             74
  CLUS_3            1             78
D17V4, multiclass
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            0             27
  CLUS_2            1             94
  CLUS_3            3             92
D17V5, multiclass
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            1            101
  CLUS_2            1             35
  CLUS_3            1             69
  CLUS_4            2             93
D17V6, multiclass
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            1            109
  CLUS_2            3            133
  CLUS_3            1             56
D17V7, multiclass
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            1            104
  CLUS_2            1            115
  CLUS_3            3             98
D17V8, multiclass
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            1             96
  CLUS_2            3            119
  CLUS_3            1            102

Clustering(18) Variable = LYPD3 MUTATION ANALYSIS
D18V1, multiclass
        clus
vv       LYPD3 MUTATED LYPD3 WILD-TYPE
  CLUS_1             0              26
  CLUS_2             2             242
  CLUS_3             1              47
D18V2, multiclass
        clus
vv       LYPD3 MUTATED LYPD3 WILD-TYPE
  CLUS_1             0             105
  CLUS_2             0              44
  CLUS_3             3             171
D18V3, multiclass
[1] "Remove cluster labels:" "LYPD3 MUTATED"         
clus
  LYPD3 MUTATED LYPD3 WILD-TYPE 
              1             216 
     TCGA-BJ-A0YZ      TCGA-BJ-A0Z0      TCGA-BJ-A0Z2      TCGA-BJ-A0Z3 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A0Z5      TCGA-BJ-A0Z9      TCGA-BJ-A0ZA      TCGA-BJ-A0ZB 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A0ZC      TCGA-BJ-A0ZE      TCGA-BJ-A0ZF      TCGA-BJ-A0ZG 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A0ZJ      TCGA-BJ-A18Y      TCGA-BJ-A18Z      TCGA-BJ-A190 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A191      TCGA-BJ-A192      TCGA-BJ-A28R      TCGA-BJ-A28S 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A28T      TCGA-BJ-A28V      TCGA-BJ-A28Z      TCGA-BJ-A290 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A2N7      TCGA-BJ-A2N9      TCGA-BJ-A2NA      TCGA-BJ-A2P4 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A3EZ      TCGA-BJ-A3F0      TCGA-CE-A13K      TCGA-CE-A27D 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-CE-A3MD      TCGA-CE-A3ME      TCGA-DE-A0Y2      TCGA-DE-A2OL 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DE-A3KN      TCGA-DJ-A13M      TCGA-DJ-A13O      TCGA-DJ-A13R 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A13S      TCGA-DJ-A13V      TCGA-DJ-A13W      TCGA-DJ-A13X 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A1QD      TCGA-DJ-A1QE      TCGA-DJ-A1QF      TCGA-DJ-A1QG 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A1QI      TCGA-DJ-A1QL      TCGA-DJ-A1QM      TCGA-DJ-A1QN 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A1QO      TCGA-DJ-A2PN      TCGA-DJ-A2PP      TCGA-DJ-A2PQ 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A2PR      TCGA-DJ-A2PS      TCGA-DJ-A2PU      TCGA-DJ-A2PV 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A2PW      TCGA-DJ-A2PY      TCGA-DJ-A2PZ      TCGA-DJ-A2Q0 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A2Q1      TCGA-DJ-A2Q2      TCGA-DJ-A2Q4      TCGA-DJ-A2Q5 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A2Q6      TCGA-DJ-A2Q7      TCGA-DJ-A2Q8      TCGA-DJ-A2Q9 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A2QA      TCGA-DJ-A2QB      TCGA-DJ-A2QC      TCGA-DO-A1JZ 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DO-A1K0      TCGA-E3-A3DY      TCGA-E3-A3DZ      TCGA-E3-A3E0 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-E3-A3E1      TCGA-E3-A3E3      TCGA-E3-A3E5      TCGA-E8-A2EA 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3CL      TCGA-EL-A3CM      TCGA-EL-A3CN      TCGA-EL-A3CO 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3CP      TCGA-EL-A3CR      TCGA-EL-A3CS      TCGA-EL-A3CT 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3CU      TCGA-EL-A3CV      TCGA-EL-A3CW      TCGA-EL-A3CX 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3CY      TCGA-EL-A3CZ      TCGA-EL-A3D0      TCGA-EL-A3D1 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3D4      TCGA-EL-A3D5      TCGA-EL-A3D6      TCGA-EL-A3GO 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3GP      TCGA-EL-A3GQ      TCGA-EL-A3GR      TCGA-EL-A3GS 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3GU      TCGA-EL-A3GV      TCGA-EL-A3GW      TCGA-EL-A3GX 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3GY      TCGA-EL-A3GZ      TCGA-EL-A3H1      TCGA-EL-A3H2 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3H3      TCGA-EL-A3H4      TCGA-EL-A3H5      TCGA-EL-A3H7 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3H8      TCGA-EL-A3MW      TCGA-EL-A3MX      TCGA-EL-A3MY 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3MZ      TCGA-EL-A3N2      TCGA-EL-A3N3      TCGA-EM-A1CT 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A1CU      TCGA-EM-A1CV      TCGA-EM-A1CW      TCGA-EM-A1YA 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A1YB      TCGA-EM-A1YC      TCGA-EM-A1YD      TCGA-EM-A1YE 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A22I      TCGA-EM-A22J      TCGA-EM-A22L      TCGA-EM-A22M 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A22O      TCGA-EM-A22Q      TCGA-EM-A2CJ      TCGA-EM-A2CK 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A2CL      TCGA-EM-A2CM      TCGA-EM-A2CN      TCGA-EM-A2CO 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A2CP      TCGA-EM-A2CQ      TCGA-EM-A2CR      TCGA-EM-A2CU 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A2OV      TCGA-EM-A2OY      TCGA-EM-A2P1      TCGA-EM-A3AI 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A3AJ      TCGA-EM-A3AL      TCGA-EM-A3AN      TCGA-EM-A3AO 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A3AP      TCGA-EM-A3FJ      TCGA-EM-A3FL      TCGA-EM-A3FN 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A3FO      TCGA-EM-A3FP      TCGA-ET-A25G      TCGA-ET-A25O 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A2MY      TCGA-ET-A2MZ      TCGA-ET-A2N0      TCGA-ET-A2N1 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A2N4      TCGA-ET-A2N5      TCGA-ET-A39I      TCGA-ET-A39J 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A39L      TCGA-ET-A39M      TCGA-ET-A39N      TCGA-ET-A39P 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A39R      TCGA-ET-A39T      TCGA-ET-A3BN      TCGA-ET-A3BP 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A3BS      TCGA-ET-A3BT      TCGA-ET-A3BU      TCGA-ET-A3BV 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A3BW      TCGA-ET-A3BX      TCGA-ET-A3DO      TCGA-ET-A3DP 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A3DS      TCGA-ET-A3DT      TCGA-ET-A3DV      TCGA-ET-A3DW 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-FE-A22Z      TCGA-FE-A230      TCGA-FE-A231      TCGA-FE-A232 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-FE-A233      TCGA-FE-A234      TCGA-FE-A235      TCGA-FE-A236 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-FE-A237      TCGA-FE-A23A      TCGA-FY-A2QD      TCGA-FY-A3BL 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-FY-A3ON      TCGA-GE-A2C6      TCGA-H2-A2K9      TCGA-IM-A3EB 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-IM-A3ED      TCGA-J8-A3NZ      TCGA-J8-A3O0      TCGA-J8-A3O1 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
D18V4, multiclass
[1] "Remove cluster labels:" "LYPD3 MUTATED"         
clus
  LYPD3 MUTATED LYPD3 WILD-TYPE 
              1             216 
     TCGA-BJ-A0YZ      TCGA-BJ-A0Z0      TCGA-BJ-A0Z2      TCGA-BJ-A0Z3 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A0Z5      TCGA-BJ-A0Z9      TCGA-BJ-A0ZA      TCGA-BJ-A0ZB 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A0ZC      TCGA-BJ-A0ZE      TCGA-BJ-A0ZF      TCGA-BJ-A0ZG 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A0ZJ      TCGA-BJ-A18Y      TCGA-BJ-A18Z      TCGA-BJ-A190 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A191      TCGA-BJ-A192      TCGA-BJ-A28R      TCGA-BJ-A28S 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A28T      TCGA-BJ-A28V      TCGA-BJ-A28Z      TCGA-BJ-A290 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A2N7      TCGA-BJ-A2N9      TCGA-BJ-A2NA      TCGA-BJ-A2P4 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-BJ-A3EZ      TCGA-BJ-A3F0      TCGA-CE-A13K      TCGA-CE-A27D 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-CE-A3MD      TCGA-CE-A3ME      TCGA-DE-A0Y2      TCGA-DE-A2OL 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DE-A3KN      TCGA-DJ-A13M      TCGA-DJ-A13O      TCGA-DJ-A13R 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A13S      TCGA-DJ-A13V      TCGA-DJ-A13W      TCGA-DJ-A13X 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A1QD      TCGA-DJ-A1QE      TCGA-DJ-A1QF      TCGA-DJ-A1QG 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A1QI      TCGA-DJ-A1QL      TCGA-DJ-A1QM      TCGA-DJ-A1QN 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A1QO      TCGA-DJ-A2PN      TCGA-DJ-A2PP      TCGA-DJ-A2PQ 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A2PR      TCGA-DJ-A2PS      TCGA-DJ-A2PU      TCGA-DJ-A2PV 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A2PW      TCGA-DJ-A2PY      TCGA-DJ-A2PZ      TCGA-DJ-A2Q0 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A2Q1      TCGA-DJ-A2Q2      TCGA-DJ-A2Q4      TCGA-DJ-A2Q5 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A2Q6      TCGA-DJ-A2Q7      TCGA-DJ-A2Q8      TCGA-DJ-A2Q9 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DJ-A2QA      TCGA-DJ-A2QB      TCGA-DJ-A2QC      TCGA-DO-A1JZ 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-DO-A1K0      TCGA-E3-A3DY      TCGA-E3-A3DZ      TCGA-E3-A3E0 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-E3-A3E1      TCGA-E3-A3E3      TCGA-E3-A3E5      TCGA-E8-A2EA 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3CL      TCGA-EL-A3CM      TCGA-EL-A3CN      TCGA-EL-A3CO 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3CP      TCGA-EL-A3CR      TCGA-EL-A3CS      TCGA-EL-A3CT 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3CU      TCGA-EL-A3CV      TCGA-EL-A3CW      TCGA-EL-A3CX 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3CY      TCGA-EL-A3CZ      TCGA-EL-A3D0      TCGA-EL-A3D1 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3D4      TCGA-EL-A3D5      TCGA-EL-A3D6      TCGA-EL-A3GO 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3GP      TCGA-EL-A3GQ      TCGA-EL-A3GR      TCGA-EL-A3GS 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3GU      TCGA-EL-A3GV      TCGA-EL-A3GW      TCGA-EL-A3GX 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3GY      TCGA-EL-A3GZ      TCGA-EL-A3H1      TCGA-EL-A3H2 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3H3      TCGA-EL-A3H4      TCGA-EL-A3H5      TCGA-EL-A3H7 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3H8      TCGA-EL-A3MW      TCGA-EL-A3MX      TCGA-EL-A3MY 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EL-A3MZ      TCGA-EL-A3N2      TCGA-EL-A3N3      TCGA-EM-A1CT 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A1CU      TCGA-EM-A1CV      TCGA-EM-A1CW      TCGA-EM-A1YA 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A1YB      TCGA-EM-A1YC      TCGA-EM-A1YD      TCGA-EM-A1YE 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A22I      TCGA-EM-A22J      TCGA-EM-A22L      TCGA-EM-A22M 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A22O      TCGA-EM-A22Q      TCGA-EM-A2CJ      TCGA-EM-A2CK 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A2CL      TCGA-EM-A2CM      TCGA-EM-A2CN      TCGA-EM-A2CO 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A2CP      TCGA-EM-A2CQ      TCGA-EM-A2CR      TCGA-EM-A2CU 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A2OV      TCGA-EM-A2OY      TCGA-EM-A2P1      TCGA-EM-A3AI 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A3AJ      TCGA-EM-A3AL      TCGA-EM-A3AN      TCGA-EM-A3AO 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A3AP      TCGA-EM-A3FJ      TCGA-EM-A3FL      TCGA-EM-A3FN 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-EM-A3FO      TCGA-EM-A3FP      TCGA-ET-A25G      TCGA-ET-A25O 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A2MY      TCGA-ET-A2MZ      TCGA-ET-A2N0      TCGA-ET-A2N1 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A2N4      TCGA-ET-A2N5      TCGA-ET-A39I      TCGA-ET-A39J 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A39L      TCGA-ET-A39M      TCGA-ET-A39N      TCGA-ET-A39P 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A39R      TCGA-ET-A39T      TCGA-ET-A3BN      TCGA-ET-A3BP 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A3BS      TCGA-ET-A3BT      TCGA-ET-A3BU      TCGA-ET-A3BV 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A3BW      TCGA-ET-A3BX      TCGA-ET-A3DO      TCGA-ET-A3DP 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-ET-A3DS      TCGA-ET-A3DT      TCGA-ET-A3DV      TCGA-ET-A3DW 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-FE-A22Z      TCGA-FE-A230      TCGA-FE-A231      TCGA-FE-A232 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-FE-A233      TCGA-FE-A234      TCGA-FE-A235      TCGA-FE-A236 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-FE-A237      TCGA-FE-A23A      TCGA-FY-A2QD      TCGA-FY-A3BL 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-FY-A3ON      TCGA-GE-A2C6      TCGA-H2-A2K9      TCGA-IM-A3EB 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
     TCGA-IM-A3ED      TCGA-J8-A3NZ      TCGA-J8-A3O0      TCGA-J8-A3O1 
"LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" "LYPD3 WILD-TYPE" 
D18V5, multiclass
        clus
vv       LYPD3 MUTATED LYPD3 WILD-TYPE
  CLUS_1             0             102
  CLUS_2             0              36
  CLUS_3             1              69
  CLUS_4             2              93
D18V6, multiclass
        clus
vv       LYPD3 MUTATED LYPD3 WILD-TYPE
  CLUS_1             0             110
  CLUS_2             3             133
  CLUS_3             0              57
D18V7, multiclass
        clus
vv       LYPD3 MUTATED LYPD3 WILD-TYPE
  CLUS_1             0             105
  CLUS_2             2             114
  CLUS_3             1             100
D18V8, multiclass
        clus
vv       LYPD3 MUTATED LYPD3 WILD-TYPE
  CLUS_1             0              97
  CLUS_2             2             120
  CLUS_3             1             102

Clustering(19) Variable = TMEM90B MUTATION ANALYSIS
D19V1, multiclass
        clus
vv       TMEM90B MUTATED TMEM90B WILD-TYPE
  CLUS_1               1                25
  CLUS_2               1               243
  CLUS_3               1                47
D19V2, multiclass
        clus
vv       TMEM90B MUTATED TMEM90B WILD-TYPE
  CLUS_1               1               104
  CLUS_2               0                44
  CLUS_3               2               172
D19V3, multiclass
D19V4, multiclass
D19V5, multiclass
        clus
vv       TMEM90B MUTATED TMEM90B WILD-TYPE
  CLUS_1               1               101
  CLUS_2               0                36
  CLUS_3               1                69
  CLUS_4               1                94
D19V6, multiclass
        clus
vv       TMEM90B MUTATED TMEM90B WILD-TYPE
  CLUS_1               1               109
  CLUS_2               1               135
  CLUS_3               1                56
D19V7, multiclass
        clus
vv       TMEM90B MUTATED TMEM90B WILD-TYPE
  CLUS_1               1               104
  CLUS_2               1               115
  CLUS_3               1               100
D19V8, multiclass
        clus
vv       TMEM90B MUTATED TMEM90B WILD-TYPE
  CLUS_1               1                96
  CLUS_2               1               121
  CLUS_3               1               102

Clustering(20) Variable = ZNF799 MUTATION ANALYSIS
D20V1, multiclass
        clus
vv       ZNF799 MUTATED ZNF799 WILD-TYPE
  CLUS_1              1               25
  CLUS_2              4              240
  CLUS_3              0               48
D20V2, multiclass
        clus
vv       ZNF799 MUTATED ZNF799 WILD-TYPE
  CLUS_1              1              104
  CLUS_2              1               43
  CLUS_3              3              171
D20V3, multiclass
        clus
vv       ZNF799 MUTATED ZNF799 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              0               75
  CLUS_3              2               77
D20V4, multiclass
        clus
vv       ZNF799 MUTATED ZNF799 WILD-TYPE
  CLUS_1              0               27
  CLUS_2              1               94
  CLUS_3              2               93
D20V5, multiclass
        clus
vv       ZNF799 MUTATED ZNF799 WILD-TYPE
  CLUS_1              1              101
  CLUS_2              1               35
  CLUS_3              2               68
  CLUS_4              1               94
D20V6, multiclass
        clus
vv       ZNF799 MUTATED ZNF799 WILD-TYPE
  CLUS_1              1              109
  CLUS_2              3              133
  CLUS_3              1               56
D20V7, multiclass
        clus
vv       ZNF799 MUTATED ZNF799 WILD-TYPE
  CLUS_1              1              104
  CLUS_2              1              115
  CLUS_3              3               98
D20V8, multiclass
        clus
vv       ZNF799 MUTATED ZNF799 WILD-TYPE
  CLUS_1              1               96
  CLUS_2              2              120
  CLUS_3              2              101

Clustering(21) Variable = PPM1D MUTATION ANALYSIS
D21V1, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             0              26
  CLUS_2             4             240
  CLUS_3             1              47
D21V2, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             2             103
  CLUS_2             0              44
  CLUS_3             3             171
D21V3, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             0              63
  CLUS_2             1              74
  CLUS_3             2              77
D21V4, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             0              27
  CLUS_2             3              92
  CLUS_3             0              95
D21V5, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             1             101
  CLUS_2             0              36
  CLUS_3             2              68
  CLUS_4             2              93
D21V6, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             1             109
  CLUS_2             3             133
  CLUS_3             1              56
D21V7, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             1             104
  CLUS_2             2             114
  CLUS_3             2              99
D21V8, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             0              97
  CLUS_2             2             120
  CLUS_3             3             100

Clustering(22) Variable = MAP3K3 MUTATION ANALYSIS
D22V1, multiclass
        clus
vv       MAP3K3 MUTATED MAP3K3 WILD-TYPE
  CLUS_1              1               25
  CLUS_2              3              241
  CLUS_3              0               48
D22V2, multiclass
        clus
vv       MAP3K3 MUTATED MAP3K3 WILD-TYPE
  CLUS_1              0              105
  CLUS_2              0               44
  CLUS_3              4              170
D22V3, multiclass
        clus
vv       MAP3K3 MUTATED MAP3K3 WILD-TYPE
  CLUS_1              0               63
  CLUS_2              1               74
  CLUS_3              3               76
D22V4, multiclass
        clus
vv       MAP3K3 MUTATED MAP3K3 WILD-TYPE
  CLUS_1              0               27
  CLUS_2              4               91
  CLUS_3              0               95
D22V5, multiclass
        clus
vv       MAP3K3 MUTATED MAP3K3 WILD-TYPE
  CLUS_1              0              102
  CLUS_2              0               36
  CLUS_3              2               68
  CLUS_4              2               93
D22V6, multiclass
        clus
vv       MAP3K3 MUTATED MAP3K3 WILD-TYPE
  CLUS_1              0              110
  CLUS_2              2              134
  CLUS_3              2               55
D22V7, multiclass
        clus
vv       MAP3K3 MUTATED MAP3K3 WILD-TYPE
  CLUS_1              0              105
  CLUS_2              2              114
  CLUS_3              2               99
D22V8, multiclass
        clus
vv       MAP3K3 MUTATED MAP3K3 WILD-TYPE
  CLUS_1              0               97
  CLUS_2              3              119
  CLUS_3              1              102

Clustering(23) Variable = TROAP MUTATION ANALYSIS
D23V1, multiclass
        clus
vv       TROAP MUTATED TROAP WILD-TYPE
  CLUS_1             0              26
  CLUS_2             3             241
  CLUS_3             0              48
D23V2, multiclass
        clus
vv       TROAP MUTATED TROAP WILD-TYPE
  CLUS_1             1             104
  CLUS_2             1              43
  CLUS_3             1             173
D23V3, multiclass
        clus
vv       TROAP MUTATED TROAP WILD-TYPE
  CLUS_1             0              63
  CLUS_2             1              74
  CLUS_3             2              77
D23V4, multiclass
        clus
vv       TROAP MUTATED TROAP WILD-TYPE
  CLUS_1             0              27
  CLUS_2             2              93
  CLUS_3             1              94
D23V5, multiclass
        clus
vv       TROAP MUTATED TROAP WILD-TYPE
  CLUS_1             1             101
  CLUS_2             0              36
  CLUS_3             0              70
  CLUS_4             2              93
D23V6, multiclass
        clus
vv       TROAP MUTATED TROAP WILD-TYPE
  CLUS_1             1             109
  CLUS_2             2             134
  CLUS_3             0              57
D23V7, multiclass
        clus
vv       TROAP MUTATED TROAP WILD-TYPE
  CLUS_1             2             103
  CLUS_2             0             116
  CLUS_3             1             100
D23V8, multiclass
        clus
vv       TROAP MUTATED TROAP WILD-TYPE
  CLUS_1             2              95
  CLUS_2             1             121
  CLUS_3             0             103

Clustering(24) Variable = SYNPO2L MUTATION ANALYSIS
D24V1, multiclass
        clus
vv       SYNPO2L MUTATED SYNPO2L WILD-TYPE
  CLUS_1               0                26
  CLUS_2               2               242
  CLUS_3               1                47
D24V2, multiclass
        clus
vv       SYNPO2L MUTATED SYNPO2L WILD-TYPE
  CLUS_1               1               104
  CLUS_2               0                44
  CLUS_3               2               172
D24V3, multiclass
[1] "Remove cluster labels:" "SYNPO2L MUTATED"       
clus
  SYNPO2L MUTATED SYNPO2L WILD-TYPE 
                2               215 
       TCGA-BJ-A0YZ        TCGA-BJ-A0Z0        TCGA-BJ-A0Z2        TCGA-BJ-A0Z3 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A0Z5        TCGA-BJ-A0Z9        TCGA-BJ-A0ZA        TCGA-BJ-A0ZB 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A0ZC        TCGA-BJ-A0ZE        TCGA-BJ-A0ZF        TCGA-BJ-A0ZG 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A0ZJ        TCGA-BJ-A18Y        TCGA-BJ-A18Z        TCGA-BJ-A190 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A191        TCGA-BJ-A192        TCGA-BJ-A28R        TCGA-BJ-A28S 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A28T        TCGA-BJ-A28V        TCGA-BJ-A28Z        TCGA-BJ-A290 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A2N7        TCGA-BJ-A2N9        TCGA-BJ-A2NA        TCGA-BJ-A2P4 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A3EZ        TCGA-BJ-A3F0        TCGA-CE-A13K        TCGA-CE-A27D 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-CE-A3MD        TCGA-CE-A3ME        TCGA-DE-A0Y2        TCGA-DE-A2OL 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DE-A3KN        TCGA-DJ-A13M        TCGA-DJ-A13O        TCGA-DJ-A13R 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A13S        TCGA-DJ-A13V        TCGA-DJ-A13W        TCGA-DJ-A13X 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A1QD        TCGA-DJ-A1QE        TCGA-DJ-A1QF        TCGA-DJ-A1QG 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A1QI        TCGA-DJ-A1QL        TCGA-DJ-A1QM        TCGA-DJ-A1QN 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A1QO        TCGA-DJ-A2PN        TCGA-DJ-A2PO        TCGA-DJ-A2PP 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A2PQ        TCGA-DJ-A2PR        TCGA-DJ-A2PS        TCGA-DJ-A2PU 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A2PV        TCGA-DJ-A2PW        TCGA-DJ-A2PY        TCGA-DJ-A2PZ 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A2Q0        TCGA-DJ-A2Q1        TCGA-DJ-A2Q2        TCGA-DJ-A2Q4 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A2Q5        TCGA-DJ-A2Q6        TCGA-DJ-A2Q7        TCGA-DJ-A2Q8 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A2Q9        TCGA-DJ-A2QA        TCGA-DJ-A2QB        TCGA-DJ-A2QC 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DO-A1JZ        TCGA-DO-A1K0        TCGA-E3-A3DY        TCGA-E3-A3DZ 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-E3-A3E0        TCGA-E3-A3E1        TCGA-E3-A3E3        TCGA-E3-A3E5 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-E8-A2EA        TCGA-EL-A3CL        TCGA-EL-A3CM        TCGA-EL-A3CO 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3CP        TCGA-EL-A3CR        TCGA-EL-A3CS        TCGA-EL-A3CT 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3CU        TCGA-EL-A3CV        TCGA-EL-A3CW        TCGA-EL-A3CX 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3CY        TCGA-EL-A3CZ        TCGA-EL-A3D0        TCGA-EL-A3D1 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3D4        TCGA-EL-A3D5        TCGA-EL-A3D6        TCGA-EL-A3GO 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3GP        TCGA-EL-A3GQ        TCGA-EL-A3GR        TCGA-EL-A3GS 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3GU        TCGA-EL-A3GV        TCGA-EL-A3GW        TCGA-EL-A3GX 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3GY        TCGA-EL-A3GZ        TCGA-EL-A3H1        TCGA-EL-A3H3 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3H4        TCGA-EL-A3H5        TCGA-EL-A3H7        TCGA-EL-A3H8 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3MW        TCGA-EL-A3MX        TCGA-EL-A3MY        TCGA-EL-A3MZ 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3N2        TCGA-EL-A3N3        TCGA-EM-A1CT        TCGA-EM-A1CU 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A1CV        TCGA-EM-A1CW        TCGA-EM-A1YA        TCGA-EM-A1YB 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A1YC        TCGA-EM-A1YD        TCGA-EM-A1YE        TCGA-EM-A22I 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A22J        TCGA-EM-A22L        TCGA-EM-A22M        TCGA-EM-A22O 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A22Q        TCGA-EM-A2CJ        TCGA-EM-A2CK        TCGA-EM-A2CL 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A2CM        TCGA-EM-A2CN        TCGA-EM-A2CO        TCGA-EM-A2CP 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A2CQ        TCGA-EM-A2CR        TCGA-EM-A2CU        TCGA-EM-A2OV 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A2OY        TCGA-EM-A2P1        TCGA-EM-A3AI        TCGA-EM-A3AJ 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A3AL        TCGA-EM-A3AN        TCGA-EM-A3AO        TCGA-EM-A3AP 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A3FJ        TCGA-EM-A3FL        TCGA-EM-A3FN        TCGA-EM-A3FO 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A3FP        TCGA-ET-A25G        TCGA-ET-A25O        TCGA-ET-A2MY 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A2MZ        TCGA-ET-A2N0        TCGA-ET-A2N1        TCGA-ET-A2N4 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A2N5        TCGA-ET-A39I        TCGA-ET-A39J        TCGA-ET-A39L 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A39M        TCGA-ET-A39N        TCGA-ET-A39P        TCGA-ET-A39R 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A39T        TCGA-ET-A3BN        TCGA-ET-A3BP        TCGA-ET-A3BS 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A3BT        TCGA-ET-A3BU        TCGA-ET-A3BV        TCGA-ET-A3BW 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A3BX        TCGA-ET-A3DO        TCGA-ET-A3DP        TCGA-ET-A3DS 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A3DT        TCGA-ET-A3DV        TCGA-ET-A3DW        TCGA-FE-A22Z 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-FE-A230        TCGA-FE-A231        TCGA-FE-A232        TCGA-FE-A233 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-FE-A234        TCGA-FE-A235        TCGA-FE-A236        TCGA-FE-A237 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-FE-A23A        TCGA-FY-A2QD        TCGA-FY-A3BL        TCGA-FY-A3ON 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-GE-A2C6        TCGA-H2-A2K9        TCGA-IM-A3EB        TCGA-IM-A3ED 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-J8-A3NZ        TCGA-J8-A3O0        TCGA-J8-A3O1 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
D24V4, multiclass
[1] "Remove cluster labels:" "SYNPO2L MUTATED"       
clus
  SYNPO2L MUTATED SYNPO2L WILD-TYPE 
                2               215 
       TCGA-BJ-A0YZ        TCGA-BJ-A0Z0        TCGA-BJ-A0Z2        TCGA-BJ-A0Z3 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A0Z5        TCGA-BJ-A0Z9        TCGA-BJ-A0ZA        TCGA-BJ-A0ZB 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A0ZC        TCGA-BJ-A0ZE        TCGA-BJ-A0ZF        TCGA-BJ-A0ZG 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A0ZJ        TCGA-BJ-A18Y        TCGA-BJ-A18Z        TCGA-BJ-A190 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A191        TCGA-BJ-A192        TCGA-BJ-A28R        TCGA-BJ-A28S 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A28T        TCGA-BJ-A28V        TCGA-BJ-A28Z        TCGA-BJ-A290 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A2N7        TCGA-BJ-A2N9        TCGA-BJ-A2NA        TCGA-BJ-A2P4 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-BJ-A3EZ        TCGA-BJ-A3F0        TCGA-CE-A13K        TCGA-CE-A27D 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-CE-A3MD        TCGA-CE-A3ME        TCGA-DE-A0Y2        TCGA-DE-A2OL 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DE-A3KN        TCGA-DJ-A13M        TCGA-DJ-A13O        TCGA-DJ-A13R 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A13S        TCGA-DJ-A13V        TCGA-DJ-A13W        TCGA-DJ-A13X 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A1QD        TCGA-DJ-A1QE        TCGA-DJ-A1QF        TCGA-DJ-A1QG 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A1QI        TCGA-DJ-A1QL        TCGA-DJ-A1QM        TCGA-DJ-A1QN 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A1QO        TCGA-DJ-A2PN        TCGA-DJ-A2PO        TCGA-DJ-A2PP 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A2PQ        TCGA-DJ-A2PR        TCGA-DJ-A2PS        TCGA-DJ-A2PU 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A2PV        TCGA-DJ-A2PW        TCGA-DJ-A2PY        TCGA-DJ-A2PZ 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A2Q0        TCGA-DJ-A2Q1        TCGA-DJ-A2Q2        TCGA-DJ-A2Q4 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A2Q5        TCGA-DJ-A2Q6        TCGA-DJ-A2Q7        TCGA-DJ-A2Q8 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DJ-A2Q9        TCGA-DJ-A2QA        TCGA-DJ-A2QB        TCGA-DJ-A2QC 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-DO-A1JZ        TCGA-DO-A1K0        TCGA-E3-A3DY        TCGA-E3-A3DZ 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-E3-A3E0        TCGA-E3-A3E1        TCGA-E3-A3E3        TCGA-E3-A3E5 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-E8-A2EA        TCGA-EL-A3CL        TCGA-EL-A3CM        TCGA-EL-A3CO 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3CP        TCGA-EL-A3CR        TCGA-EL-A3CS        TCGA-EL-A3CT 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3CU        TCGA-EL-A3CV        TCGA-EL-A3CW        TCGA-EL-A3CX 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3CY        TCGA-EL-A3CZ        TCGA-EL-A3D0        TCGA-EL-A3D1 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3D4        TCGA-EL-A3D5        TCGA-EL-A3D6        TCGA-EL-A3GO 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3GP        TCGA-EL-A3GQ        TCGA-EL-A3GR        TCGA-EL-A3GS 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3GU        TCGA-EL-A3GV        TCGA-EL-A3GW        TCGA-EL-A3GX 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3GY        TCGA-EL-A3GZ        TCGA-EL-A3H1        TCGA-EL-A3H3 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3H4        TCGA-EL-A3H5        TCGA-EL-A3H7        TCGA-EL-A3H8 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3MW        TCGA-EL-A3MX        TCGA-EL-A3MY        TCGA-EL-A3MZ 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EL-A3N2        TCGA-EL-A3N3        TCGA-EM-A1CT        TCGA-EM-A1CU 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A1CV        TCGA-EM-A1CW        TCGA-EM-A1YA        TCGA-EM-A1YB 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A1YC        TCGA-EM-A1YD        TCGA-EM-A1YE        TCGA-EM-A22I 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A22J        TCGA-EM-A22L        TCGA-EM-A22M        TCGA-EM-A22O 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A22Q        TCGA-EM-A2CJ        TCGA-EM-A2CK        TCGA-EM-A2CL 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A2CM        TCGA-EM-A2CN        TCGA-EM-A2CO        TCGA-EM-A2CP 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A2CQ        TCGA-EM-A2CR        TCGA-EM-A2CU        TCGA-EM-A2OV 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A2OY        TCGA-EM-A2P1        TCGA-EM-A3AI        TCGA-EM-A3AJ 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A3AL        TCGA-EM-A3AN        TCGA-EM-A3AO        TCGA-EM-A3AP 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A3FJ        TCGA-EM-A3FL        TCGA-EM-A3FN        TCGA-EM-A3FO 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-EM-A3FP        TCGA-ET-A25G        TCGA-ET-A25O        TCGA-ET-A2MY 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A2MZ        TCGA-ET-A2N0        TCGA-ET-A2N1        TCGA-ET-A2N4 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A2N5        TCGA-ET-A39I        TCGA-ET-A39J        TCGA-ET-A39L 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A39M        TCGA-ET-A39N        TCGA-ET-A39P        TCGA-ET-A39R 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A39T        TCGA-ET-A3BN        TCGA-ET-A3BP        TCGA-ET-A3BS 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A3BT        TCGA-ET-A3BU        TCGA-ET-A3BV        TCGA-ET-A3BW 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A3BX        TCGA-ET-A3DO        TCGA-ET-A3DP        TCGA-ET-A3DS 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-ET-A3DT        TCGA-ET-A3DV        TCGA-ET-A3DW        TCGA-FE-A22Z 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-FE-A230        TCGA-FE-A231        TCGA-FE-A232        TCGA-FE-A233 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-FE-A234        TCGA-FE-A235        TCGA-FE-A236        TCGA-FE-A237 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-FE-A23A        TCGA-FY-A2QD        TCGA-FY-A3BL        TCGA-FY-A3ON 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-GE-A2C6        TCGA-H2-A2K9        TCGA-IM-A3EB        TCGA-IM-A3ED 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
       TCGA-J8-A3NZ        TCGA-J8-A3O0        TCGA-J8-A3O1 
"SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" "SYNPO2L WILD-TYPE" 
D24V5, multiclass
        clus
vv       SYNPO2L MUTATED SYNPO2L WILD-TYPE
  CLUS_1               1               101
  CLUS_2               0                36
  CLUS_3               1                69
  CLUS_4               1                94
D24V6, multiclass
        clus
vv       SYNPO2L MUTATED SYNPO2L WILD-TYPE
  CLUS_1               1               109
  CLUS_2               1               135
  CLUS_3               1                56
D24V7, multiclass
        clus
vv       SYNPO2L MUTATED SYNPO2L WILD-TYPE
  CLUS_1               1               104
  CLUS_2               1               115
  CLUS_3               1               100
D24V8, multiclass
        clus
vv       SYNPO2L MUTATED SYNPO2L WILD-TYPE
  CLUS_1               1                96
  CLUS_2               1               121
  CLUS_3               1               102

Clustering(25) Variable = ATAD2 MUTATION ANALYSIS
D25V1, multiclass
        clus
vv       ATAD2 MUTATED ATAD2 WILD-TYPE
  CLUS_1             0              26
  CLUS_2             4             240
  CLUS_3             0              48
D25V2, multiclass
        clus
vv       ATAD2 MUTATED ATAD2 WILD-TYPE
  CLUS_1             1             104
  CLUS_2             1              43
  CLUS_3             2             172
D25V3, multiclass
[1] "Remove cluster labels:" "ATAD2 MUTATED"         
clus
  ATAD2 MUTATED ATAD2 WILD-TYPE 
              1             216 
     TCGA-BJ-A0YZ      TCGA-BJ-A0Z0      TCGA-BJ-A0Z2      TCGA-BJ-A0Z3 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A0Z5      TCGA-BJ-A0Z9      TCGA-BJ-A0ZA      TCGA-BJ-A0ZB 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A0ZC      TCGA-BJ-A0ZE      TCGA-BJ-A0ZF      TCGA-BJ-A0ZG 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A0ZJ      TCGA-BJ-A18Y      TCGA-BJ-A18Z      TCGA-BJ-A190 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A191      TCGA-BJ-A192      TCGA-BJ-A28R      TCGA-BJ-A28S 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A28T      TCGA-BJ-A28V      TCGA-BJ-A28Z      TCGA-BJ-A290 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A2N7      TCGA-BJ-A2N9      TCGA-BJ-A2NA      TCGA-BJ-A2P4 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A3EZ      TCGA-BJ-A3F0      TCGA-CE-A13K      TCGA-CE-A27D 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-CE-A3MD      TCGA-CE-A3ME      TCGA-DE-A0Y2      TCGA-DE-A2OL 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DE-A3KN      TCGA-DJ-A13M      TCGA-DJ-A13O      TCGA-DJ-A13R 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A13S      TCGA-DJ-A13V      TCGA-DJ-A13W      TCGA-DJ-A13X 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A1QD      TCGA-DJ-A1QE      TCGA-DJ-A1QF      TCGA-DJ-A1QG 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A1QI      TCGA-DJ-A1QL      TCGA-DJ-A1QM      TCGA-DJ-A1QN 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A1QO      TCGA-DJ-A2PN      TCGA-DJ-A2PO      TCGA-DJ-A2PP 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A2PQ      TCGA-DJ-A2PR      TCGA-DJ-A2PS      TCGA-DJ-A2PU 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A2PV      TCGA-DJ-A2PW      TCGA-DJ-A2PY      TCGA-DJ-A2PZ 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A2Q0      TCGA-DJ-A2Q1      TCGA-DJ-A2Q2      TCGA-DJ-A2Q4 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A2Q5      TCGA-DJ-A2Q6      TCGA-DJ-A2Q7      TCGA-DJ-A2Q8 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A2Q9      TCGA-DJ-A2QA      TCGA-DJ-A2QB      TCGA-DJ-A2QC 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DO-A1JZ      TCGA-DO-A1K0      TCGA-E3-A3DY      TCGA-E3-A3DZ 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-E3-A3E0      TCGA-E3-A3E1      TCGA-E3-A3E3      TCGA-E3-A3E5 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-E8-A2EA      TCGA-EL-A3CL      TCGA-EL-A3CM      TCGA-EL-A3CN 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3CO      TCGA-EL-A3CP      TCGA-EL-A3CR      TCGA-EL-A3CS 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3CT      TCGA-EL-A3CU      TCGA-EL-A3CV      TCGA-EL-A3CW 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3CX      TCGA-EL-A3CY      TCGA-EL-A3CZ      TCGA-EL-A3D0 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3D1      TCGA-EL-A3D4      TCGA-EL-A3D5      TCGA-EL-A3D6 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3GO      TCGA-EL-A3GP      TCGA-EL-A3GQ      TCGA-EL-A3GR 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3GS      TCGA-EL-A3GU      TCGA-EL-A3GV      TCGA-EL-A3GW 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3GX      TCGA-EL-A3GY      TCGA-EL-A3GZ      TCGA-EL-A3H1 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3H2      TCGA-EL-A3H3      TCGA-EL-A3H4      TCGA-EL-A3H5 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3H7      TCGA-EL-A3H8      TCGA-EL-A3MW      TCGA-EL-A3MX 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3MY      TCGA-EL-A3N2      TCGA-EL-A3N3      TCGA-EM-A1CT 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A1CU      TCGA-EM-A1CV      TCGA-EM-A1CW      TCGA-EM-A1YA 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A1YB      TCGA-EM-A1YC      TCGA-EM-A1YD      TCGA-EM-A1YE 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A22I      TCGA-EM-A22J      TCGA-EM-A22L      TCGA-EM-A22M 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A22O      TCGA-EM-A22Q      TCGA-EM-A2CJ      TCGA-EM-A2CK 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A2CL      TCGA-EM-A2CM      TCGA-EM-A2CN      TCGA-EM-A2CO 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A2CP      TCGA-EM-A2CQ      TCGA-EM-A2CR      TCGA-EM-A2CU 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A2OV      TCGA-EM-A2OY      TCGA-EM-A2P1      TCGA-EM-A3AI 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A3AJ      TCGA-EM-A3AL      TCGA-EM-A3AN      TCGA-EM-A3AO 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A3AP      TCGA-EM-A3FJ      TCGA-EM-A3FL      TCGA-EM-A3FN 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A3FO      TCGA-EM-A3FP      TCGA-ET-A25G      TCGA-ET-A25O 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A2MY      TCGA-ET-A2MZ      TCGA-ET-A2N0      TCGA-ET-A2N1 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A2N4      TCGA-ET-A2N5      TCGA-ET-A39I      TCGA-ET-A39J 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A39L      TCGA-ET-A39M      TCGA-ET-A39N      TCGA-ET-A39P 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A39R      TCGA-ET-A39T      TCGA-ET-A3BN      TCGA-ET-A3BP 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A3BS      TCGA-ET-A3BT      TCGA-ET-A3BU      TCGA-ET-A3BV 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A3BW      TCGA-ET-A3BX      TCGA-ET-A3DO      TCGA-ET-A3DP 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A3DS      TCGA-ET-A3DT      TCGA-ET-A3DV      TCGA-ET-A3DW 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-FE-A22Z      TCGA-FE-A230      TCGA-FE-A231      TCGA-FE-A232 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-FE-A233      TCGA-FE-A234      TCGA-FE-A235      TCGA-FE-A236 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-FE-A237      TCGA-FE-A23A      TCGA-FY-A2QD      TCGA-FY-A3BL 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-FY-A3ON      TCGA-GE-A2C6      TCGA-H2-A2K9      TCGA-IM-A3EB 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-IM-A3ED      TCGA-J8-A3NZ      TCGA-J8-A3O0      TCGA-J8-A3O1 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
D25V4, multiclass
[1] "Remove cluster labels:" "ATAD2 MUTATED"         
clus
  ATAD2 MUTATED ATAD2 WILD-TYPE 
              1             216 
     TCGA-BJ-A0YZ      TCGA-BJ-A0Z0      TCGA-BJ-A0Z2      TCGA-BJ-A0Z3 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A0Z5      TCGA-BJ-A0Z9      TCGA-BJ-A0ZA      TCGA-BJ-A0ZB 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A0ZC      TCGA-BJ-A0ZE      TCGA-BJ-A0ZF      TCGA-BJ-A0ZG 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A0ZJ      TCGA-BJ-A18Y      TCGA-BJ-A18Z      TCGA-BJ-A190 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A191      TCGA-BJ-A192      TCGA-BJ-A28R      TCGA-BJ-A28S 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A28T      TCGA-BJ-A28V      TCGA-BJ-A28Z      TCGA-BJ-A290 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A2N7      TCGA-BJ-A2N9      TCGA-BJ-A2NA      TCGA-BJ-A2P4 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-BJ-A3EZ      TCGA-BJ-A3F0      TCGA-CE-A13K      TCGA-CE-A27D 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-CE-A3MD      TCGA-CE-A3ME      TCGA-DE-A0Y2      TCGA-DE-A2OL 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DE-A3KN      TCGA-DJ-A13M      TCGA-DJ-A13O      TCGA-DJ-A13R 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A13S      TCGA-DJ-A13V      TCGA-DJ-A13W      TCGA-DJ-A13X 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A1QD      TCGA-DJ-A1QE      TCGA-DJ-A1QF      TCGA-DJ-A1QG 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A1QI      TCGA-DJ-A1QL      TCGA-DJ-A1QM      TCGA-DJ-A1QN 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A1QO      TCGA-DJ-A2PN      TCGA-DJ-A2PO      TCGA-DJ-A2PP 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A2PQ      TCGA-DJ-A2PR      TCGA-DJ-A2PS      TCGA-DJ-A2PU 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A2PV      TCGA-DJ-A2PW      TCGA-DJ-A2PY      TCGA-DJ-A2PZ 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A2Q0      TCGA-DJ-A2Q1      TCGA-DJ-A2Q2      TCGA-DJ-A2Q4 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A2Q5      TCGA-DJ-A2Q6      TCGA-DJ-A2Q7      TCGA-DJ-A2Q8 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DJ-A2Q9      TCGA-DJ-A2QA      TCGA-DJ-A2QB      TCGA-DJ-A2QC 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-DO-A1JZ      TCGA-DO-A1K0      TCGA-E3-A3DY      TCGA-E3-A3DZ 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-E3-A3E0      TCGA-E3-A3E1      TCGA-E3-A3E3      TCGA-E3-A3E5 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-E8-A2EA      TCGA-EL-A3CL      TCGA-EL-A3CM      TCGA-EL-A3CN 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3CO      TCGA-EL-A3CP      TCGA-EL-A3CR      TCGA-EL-A3CS 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3CT      TCGA-EL-A3CU      TCGA-EL-A3CV      TCGA-EL-A3CW 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3CX      TCGA-EL-A3CY      TCGA-EL-A3CZ      TCGA-EL-A3D0 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3D1      TCGA-EL-A3D4      TCGA-EL-A3D5      TCGA-EL-A3D6 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3GO      TCGA-EL-A3GP      TCGA-EL-A3GQ      TCGA-EL-A3GR 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3GS      TCGA-EL-A3GU      TCGA-EL-A3GV      TCGA-EL-A3GW 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3GX      TCGA-EL-A3GY      TCGA-EL-A3GZ      TCGA-EL-A3H1 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3H2      TCGA-EL-A3H3      TCGA-EL-A3H4      TCGA-EL-A3H5 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3H7      TCGA-EL-A3H8      TCGA-EL-A3MW      TCGA-EL-A3MX 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EL-A3MY      TCGA-EL-A3N2      TCGA-EL-A3N3      TCGA-EM-A1CT 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A1CU      TCGA-EM-A1CV      TCGA-EM-A1CW      TCGA-EM-A1YA 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A1YB      TCGA-EM-A1YC      TCGA-EM-A1YD      TCGA-EM-A1YE 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A22I      TCGA-EM-A22J      TCGA-EM-A22L      TCGA-EM-A22M 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A22O      TCGA-EM-A22Q      TCGA-EM-A2CJ      TCGA-EM-A2CK 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A2CL      TCGA-EM-A2CM      TCGA-EM-A2CN      TCGA-EM-A2CO 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A2CP      TCGA-EM-A2CQ      TCGA-EM-A2CR      TCGA-EM-A2CU 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A2OV      TCGA-EM-A2OY      TCGA-EM-A2P1      TCGA-EM-A3AI 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A3AJ      TCGA-EM-A3AL      TCGA-EM-A3AN      TCGA-EM-A3AO 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A3AP      TCGA-EM-A3FJ      TCGA-EM-A3FL      TCGA-EM-A3FN 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-EM-A3FO      TCGA-EM-A3FP      TCGA-ET-A25G      TCGA-ET-A25O 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A2MY      TCGA-ET-A2MZ      TCGA-ET-A2N0      TCGA-ET-A2N1 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A2N4      TCGA-ET-A2N5      TCGA-ET-A39I      TCGA-ET-A39J 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A39L      TCGA-ET-A39M      TCGA-ET-A39N      TCGA-ET-A39P 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A39R      TCGA-ET-A39T      TCGA-ET-A3BN      TCGA-ET-A3BP 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A3BS      TCGA-ET-A3BT      TCGA-ET-A3BU      TCGA-ET-A3BV 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A3BW      TCGA-ET-A3BX      TCGA-ET-A3DO      TCGA-ET-A3DP 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-ET-A3DS      TCGA-ET-A3DT      TCGA-ET-A3DV      TCGA-ET-A3DW 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-FE-A22Z      TCGA-FE-A230      TCGA-FE-A231      TCGA-FE-A232 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-FE-A233      TCGA-FE-A234      TCGA-FE-A235      TCGA-FE-A236 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-FE-A237      TCGA-FE-A23A      TCGA-FY-A2QD      TCGA-FY-A3BL 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-FY-A3ON      TCGA-GE-A2C6      TCGA-H2-A2K9      TCGA-IM-A3EB 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
     TCGA-IM-A3ED      TCGA-J8-A3NZ      TCGA-J8-A3O0      TCGA-J8-A3O1 
"ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" "ATAD2 WILD-TYPE" 
D25V5, multiclass
        clus
vv       ATAD2 MUTATED ATAD2 WILD-TYPE
  CLUS_1             1             101
  CLUS_2             1              35
  CLUS_3             1              69
  CLUS_4             1              94
D25V6, multiclass
        clus
vv       ATAD2 MUTATED ATAD2 WILD-TYPE
  CLUS_1             1             109
  CLUS_2             2             134
  CLUS_3             1              56
D25V7, multiclass
        clus
vv       ATAD2 MUTATED ATAD2 WILD-TYPE
  CLUS_1             1             104
  CLUS_2             1             115
  CLUS_3             2              99
D25V8, multiclass
        clus
vv       ATAD2 MUTATED ATAD2 WILD-TYPE
  CLUS_1             1              96
  CLUS_2             2             120
  CLUS_3             1             102

Clustering(26) Variable = KRAS MUTATION ANALYSIS
D26V1, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            0             26
  CLUS_2            3            241
  CLUS_3            0             48
D26V2, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            3            102
  CLUS_2            0             44
  CLUS_3            0            174
D26V3, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            215 
    TCGA-BJ-A0YZ     TCGA-BJ-A0Z0     TCGA-BJ-A0Z2     TCGA-BJ-A0Z3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A0Z5     TCGA-BJ-A0Z9     TCGA-BJ-A0ZA     TCGA-BJ-A0ZB 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A0ZC     TCGA-BJ-A0ZF     TCGA-BJ-A0ZG     TCGA-BJ-A0ZJ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A18Y     TCGA-BJ-A18Z     TCGA-BJ-A190     TCGA-BJ-A191 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A192     TCGA-BJ-A28R     TCGA-BJ-A28S     TCGA-BJ-A28T 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A28V     TCGA-BJ-A28Z     TCGA-BJ-A290     TCGA-BJ-A2N7 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A2N9     TCGA-BJ-A2NA     TCGA-BJ-A2P4     TCGA-BJ-A3EZ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A3F0     TCGA-CE-A13K     TCGA-CE-A27D     TCGA-CE-A3MD 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CE-A3ME     TCGA-DE-A0Y2     TCGA-DE-A2OL     TCGA-DE-A3KN 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A13M     TCGA-DJ-A13O     TCGA-DJ-A13R     TCGA-DJ-A13S 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A13V     TCGA-DJ-A13W     TCGA-DJ-A13X     TCGA-DJ-A1QD 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A1QE     TCGA-DJ-A1QF     TCGA-DJ-A1QG     TCGA-DJ-A1QI 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A1QL     TCGA-DJ-A1QM     TCGA-DJ-A1QN     TCGA-DJ-A1QO 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A2PN     TCGA-DJ-A2PO     TCGA-DJ-A2PP     TCGA-DJ-A2PQ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A2PR     TCGA-DJ-A2PS     TCGA-DJ-A2PU     TCGA-DJ-A2PV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A2PW     TCGA-DJ-A2PY     TCGA-DJ-A2PZ     TCGA-DJ-A2Q0 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A2Q1     TCGA-DJ-A2Q2     TCGA-DJ-A2Q4     TCGA-DJ-A2Q5 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A2Q6     TCGA-DJ-A2Q7     TCGA-DJ-A2Q8     TCGA-DJ-A2Q9 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A2QA     TCGA-DJ-A2QB     TCGA-DJ-A2QC     TCGA-DO-A1JZ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DO-A1K0     TCGA-E3-A3DY     TCGA-E3-A3DZ     TCGA-E3-A3E0 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E3-A3E1     TCGA-E3-A3E3     TCGA-E3-A3E5     TCGA-E8-A2EA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3CL     TCGA-EL-A3CM     TCGA-EL-A3CN     TCGA-EL-A3CO 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3CP     TCGA-EL-A3CR     TCGA-EL-A3CS     TCGA-EL-A3CT 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3CU     TCGA-EL-A3CV     TCGA-EL-A3CW     TCGA-EL-A3CX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3CY     TCGA-EL-A3CZ     TCGA-EL-A3D0     TCGA-EL-A3D1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3D4     TCGA-EL-A3D5     TCGA-EL-A3D6     TCGA-EL-A3GO 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3GP     TCGA-EL-A3GQ     TCGA-EL-A3GR     TCGA-EL-A3GS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3GU     TCGA-EL-A3GV     TCGA-EL-A3GW     TCGA-EL-A3GX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3GY     TCGA-EL-A3GZ     TCGA-EL-A3H1     TCGA-EL-A3H2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3H3     TCGA-EL-A3H4     TCGA-EL-A3H5     TCGA-EL-A3H7 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3H8     TCGA-EL-A3MW     TCGA-EL-A3MX     TCGA-EL-A3MY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3MZ     TCGA-EL-A3N2     TCGA-EL-A3N3     TCGA-EM-A1CT 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A1CU     TCGA-EM-A1CV     TCGA-EM-A1CW     TCGA-EM-A1YA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A1YB     TCGA-EM-A1YC     TCGA-EM-A1YD     TCGA-EM-A1YE 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A22I     TCGA-EM-A22J     TCGA-EM-A22L     TCGA-EM-A22M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A22O     TCGA-EM-A22Q     TCGA-EM-A2CJ     TCGA-EM-A2CK 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A2CL     TCGA-EM-A2CM     TCGA-EM-A2CN     TCGA-EM-A2CO 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A2CP     TCGA-EM-A2CR     TCGA-EM-A2CU     TCGA-EM-A2OV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A2OY     TCGA-EM-A2P1     TCGA-EM-A3AI     TCGA-EM-A3AJ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A3AL     TCGA-EM-A3AN     TCGA-EM-A3AO     TCGA-EM-A3AP 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A3FJ     TCGA-EM-A3FL     TCGA-EM-A3FN     TCGA-EM-A3FO 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A3FP     TCGA-ET-A25G     TCGA-ET-A25O     TCGA-ET-A2MY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A2MZ     TCGA-ET-A2N0     TCGA-ET-A2N1     TCGA-ET-A2N4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A2N5     TCGA-ET-A39I     TCGA-ET-A39J     TCGA-ET-A39L 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A39M     TCGA-ET-A39N     TCGA-ET-A39P     TCGA-ET-A39R 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A39T     TCGA-ET-A3BN     TCGA-ET-A3BP     TCGA-ET-A3BS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A3BT     TCGA-ET-A3BU     TCGA-ET-A3BV     TCGA-ET-A3BW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A3BX     TCGA-ET-A3DO     TCGA-ET-A3DP     TCGA-ET-A3DS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A3DT     TCGA-ET-A3DV     TCGA-ET-A3DW     TCGA-FE-A22Z 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FE-A230     TCGA-FE-A231     TCGA-FE-A232     TCGA-FE-A233 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FE-A234     TCGA-FE-A235     TCGA-FE-A236     TCGA-FE-A237 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FE-A23A     TCGA-FY-A2QD     TCGA-FY-A3BL     TCGA-FY-A3ON 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-GE-A2C6     TCGA-H2-A2K9     TCGA-IM-A3EB     TCGA-IM-A3ED 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-J8-A3NZ     TCGA-J8-A3O0     TCGA-J8-A3O1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
D26V4, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            215 
    TCGA-BJ-A0YZ     TCGA-BJ-A0Z0     TCGA-BJ-A0Z2     TCGA-BJ-A0Z3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A0Z5     TCGA-BJ-A0Z9     TCGA-BJ-A0ZA     TCGA-BJ-A0ZB 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A0ZC     TCGA-BJ-A0ZF     TCGA-BJ-A0ZG     TCGA-BJ-A0ZJ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A18Y     TCGA-BJ-A18Z     TCGA-BJ-A190     TCGA-BJ-A191 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A192     TCGA-BJ-A28R     TCGA-BJ-A28S     TCGA-BJ-A28T 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A28V     TCGA-BJ-A28Z     TCGA-BJ-A290     TCGA-BJ-A2N7 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A2N9     TCGA-BJ-A2NA     TCGA-BJ-A2P4     TCGA-BJ-A3EZ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-BJ-A3F0     TCGA-CE-A13K     TCGA-CE-A27D     TCGA-CE-A3MD 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CE-A3ME     TCGA-DE-A0Y2     TCGA-DE-A2OL     TCGA-DE-A3KN 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A13M     TCGA-DJ-A13O     TCGA-DJ-A13R     TCGA-DJ-A13S 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A13V     TCGA-DJ-A13W     TCGA-DJ-A13X     TCGA-DJ-A1QD 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A1QE     TCGA-DJ-A1QF     TCGA-DJ-A1QG     TCGA-DJ-A1QI 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A1QL     TCGA-DJ-A1QM     TCGA-DJ-A1QN     TCGA-DJ-A1QO 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A2PN     TCGA-DJ-A2PO     TCGA-DJ-A2PP     TCGA-DJ-A2PQ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A2PR     TCGA-DJ-A2PS     TCGA-DJ-A2PU     TCGA-DJ-A2PV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A2PW     TCGA-DJ-A2PY     TCGA-DJ-A2PZ     TCGA-DJ-A2Q0 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A2Q1     TCGA-DJ-A2Q2     TCGA-DJ-A2Q4     TCGA-DJ-A2Q5 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A2Q6     TCGA-DJ-A2Q7     TCGA-DJ-A2Q8     TCGA-DJ-A2Q9 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DJ-A2QA     TCGA-DJ-A2QB     TCGA-DJ-A2QC     TCGA-DO-A1JZ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DO-A1K0     TCGA-E3-A3DY     TCGA-E3-A3DZ     TCGA-E3-A3E0 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E3-A3E1     TCGA-E3-A3E3     TCGA-E3-A3E5     TCGA-E8-A2EA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3CL     TCGA-EL-A3CM     TCGA-EL-A3CN     TCGA-EL-A3CO 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3CP     TCGA-EL-A3CR     TCGA-EL-A3CS     TCGA-EL-A3CT 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3CU     TCGA-EL-A3CV     TCGA-EL-A3CW     TCGA-EL-A3CX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3CY     TCGA-EL-A3CZ     TCGA-EL-A3D0     TCGA-EL-A3D1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3D4     TCGA-EL-A3D5     TCGA-EL-A3D6     TCGA-EL-A3GO 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3GP     TCGA-EL-A3GQ     TCGA-EL-A3GR     TCGA-EL-A3GS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3GU     TCGA-EL-A3GV     TCGA-EL-A3GW     TCGA-EL-A3GX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3GY     TCGA-EL-A3GZ     TCGA-EL-A3H1     TCGA-EL-A3H2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3H3     TCGA-EL-A3H4     TCGA-EL-A3H5     TCGA-EL-A3H7 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3H8     TCGA-EL-A3MW     TCGA-EL-A3MX     TCGA-EL-A3MY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EL-A3MZ     TCGA-EL-A3N2     TCGA-EL-A3N3     TCGA-EM-A1CT 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A1CU     TCGA-EM-A1CV     TCGA-EM-A1CW     TCGA-EM-A1YA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A1YB     TCGA-EM-A1YC     TCGA-EM-A1YD     TCGA-EM-A1YE 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A22I     TCGA-EM-A22J     TCGA-EM-A22L     TCGA-EM-A22M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A22O     TCGA-EM-A22Q     TCGA-EM-A2CJ     TCGA-EM-A2CK 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A2CL     TCGA-EM-A2CM     TCGA-EM-A2CN     TCGA-EM-A2CO 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A2CP     TCGA-EM-A2CR     TCGA-EM-A2CU     TCGA-EM-A2OV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A2OY     TCGA-EM-A2P1     TCGA-EM-A3AI     TCGA-EM-A3AJ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A3AL     TCGA-EM-A3AN     TCGA-EM-A3AO     TCGA-EM-A3AP 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A3FJ     TCGA-EM-A3FL     TCGA-EM-A3FN     TCGA-EM-A3FO 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EM-A3FP     TCGA-ET-A25G     TCGA-ET-A25O     TCGA-ET-A2MY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A2MZ     TCGA-ET-A2N0     TCGA-ET-A2N1     TCGA-ET-A2N4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A2N5     TCGA-ET-A39I     TCGA-ET-A39J     TCGA-ET-A39L 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A39M     TCGA-ET-A39N     TCGA-ET-A39P     TCGA-ET-A39R 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A39T     TCGA-ET-A3BN     TCGA-ET-A3BP     TCGA-ET-A3BS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A3BT     TCGA-ET-A3BU     TCGA-ET-A3BV     TCGA-ET-A3BW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A3BX     TCGA-ET-A3DO     TCGA-ET-A3DP     TCGA-ET-A3DS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-ET-A3DT     TCGA-ET-A3DV     TCGA-ET-A3DW     TCGA-FE-A22Z 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FE-A230     TCGA-FE-A231     TCGA-FE-A232     TCGA-FE-A233 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FE-A234     TCGA-FE-A235     TCGA-FE-A236     TCGA-FE-A237 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FE-A23A     TCGA-FY-A2QD     TCGA-FY-A3BL     TCGA-FY-A3ON 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-GE-A2C6     TCGA-H2-A2K9     TCGA-IM-A3EB     TCGA-IM-A3ED 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-J8-A3NZ     TCGA-J8-A3O0     TCGA-J8-A3O1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
D26V5, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            3             99
  CLUS_2            0             36
  CLUS_3            0             70
  CLUS_4            0             95
D26V6, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            3            107
  CLUS_2            0            136
  CLUS_3            0             57
D26V7, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            3            102
  CLUS_2            0            116
  CLUS_3            0            101
D26V8, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            3             94
  CLUS_2            0            122
  CLUS_3            0            103

Clustering(27) Variable = SLC5A11 MUTATION ANALYSIS
D27V1, multiclass
        clus
vv       SLC5A11 MUTATED SLC5A11 WILD-TYPE
  CLUS_1               0                26
  CLUS_2               2               242
  CLUS_3               1                47
D27V2, multiclass
        clus
vv       SLC5A11 MUTATED SLC5A11 WILD-TYPE
  CLUS_1               2               103
  CLUS_2               0                44
  CLUS_3               1               173
D27V3, multiclass
[1] "Remove cluster labels:" "SLC5A11 MUTATED"       
clus
  SLC5A11 MUTATED SLC5A11 WILD-TYPE 
                2               215 
       TCGA-BJ-A0YZ        TCGA-BJ-A0Z0        TCGA-BJ-A0Z2        TCGA-BJ-A0Z3 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A0Z5        TCGA-BJ-A0Z9        TCGA-BJ-A0ZA        TCGA-BJ-A0ZB 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A0ZC        TCGA-BJ-A0ZE        TCGA-BJ-A0ZF        TCGA-BJ-A0ZG 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A0ZJ        TCGA-BJ-A18Y        TCGA-BJ-A18Z        TCGA-BJ-A190 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A191        TCGA-BJ-A192        TCGA-BJ-A28R        TCGA-BJ-A28S 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A28T        TCGA-BJ-A28V        TCGA-BJ-A28Z        TCGA-BJ-A290 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A2N7        TCGA-BJ-A2N9        TCGA-BJ-A2NA        TCGA-BJ-A2P4 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A3EZ        TCGA-BJ-A3F0        TCGA-CE-A13K        TCGA-CE-A27D 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-CE-A3MD        TCGA-CE-A3ME        TCGA-DE-A0Y2        TCGA-DE-A2OL 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DE-A3KN        TCGA-DJ-A13M        TCGA-DJ-A13O        TCGA-DJ-A13R 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A13V        TCGA-DJ-A13W        TCGA-DJ-A13X        TCGA-DJ-A1QD 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A1QE        TCGA-DJ-A1QF        TCGA-DJ-A1QG        TCGA-DJ-A1QI 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A1QL        TCGA-DJ-A1QM        TCGA-DJ-A1QN        TCGA-DJ-A1QO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PN        TCGA-DJ-A2PO        TCGA-DJ-A2PP        TCGA-DJ-A2PQ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PR        TCGA-DJ-A2PS        TCGA-DJ-A2PU        TCGA-DJ-A2PV 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PW        TCGA-DJ-A2PY        TCGA-DJ-A2PZ        TCGA-DJ-A2Q0 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2Q1        TCGA-DJ-A2Q2        TCGA-DJ-A2Q4        TCGA-DJ-A2Q5 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2Q6        TCGA-DJ-A2Q7        TCGA-DJ-A2Q8        TCGA-DJ-A2Q9 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2QA        TCGA-DJ-A2QB        TCGA-DJ-A2QC        TCGA-DO-A1JZ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DO-A1K0        TCGA-E3-A3DY        TCGA-E3-A3DZ        TCGA-E3-A3E0 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-E3-A3E1        TCGA-E3-A3E3        TCGA-E3-A3E5        TCGA-E8-A2EA 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CL        TCGA-EL-A3CM        TCGA-EL-A3CN        TCGA-EL-A3CO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CP        TCGA-EL-A3CR        TCGA-EL-A3CS        TCGA-EL-A3CT 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CU        TCGA-EL-A3CV        TCGA-EL-A3CW        TCGA-EL-A3CX 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CY        TCGA-EL-A3CZ        TCGA-EL-A3D0        TCGA-EL-A3D1 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3D4        TCGA-EL-A3D5        TCGA-EL-A3D6        TCGA-EL-A3GO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3GP        TCGA-EL-A3GQ        TCGA-EL-A3GR        TCGA-EL-A3GS 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3GU        TCGA-EL-A3GV        TCGA-EL-A3GW        TCGA-EL-A3GX 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3GY        TCGA-EL-A3GZ        TCGA-EL-A3H1        TCGA-EL-A3H2 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3H3        TCGA-EL-A3H4        TCGA-EL-A3H5        TCGA-EL-A3H7 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3H8        TCGA-EL-A3MW        TCGA-EL-A3MX        TCGA-EL-A3MY 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3MZ        TCGA-EL-A3N2        TCGA-EL-A3N3        TCGA-EM-A1CT 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A1CU        TCGA-EM-A1CV        TCGA-EM-A1CW        TCGA-EM-A1YA 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A1YB        TCGA-EM-A1YC        TCGA-EM-A1YD        TCGA-EM-A1YE 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A22I        TCGA-EM-A22J        TCGA-EM-A22L        TCGA-EM-A22M 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A22O        TCGA-EM-A22Q        TCGA-EM-A2CJ        TCGA-EM-A2CK 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2CL        TCGA-EM-A2CM        TCGA-EM-A2CN        TCGA-EM-A2CO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2CP        TCGA-EM-A2CQ        TCGA-EM-A2CR        TCGA-EM-A2CU 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2OV        TCGA-EM-A2OY        TCGA-EM-A2P1        TCGA-EM-A3AI 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3AJ        TCGA-EM-A3AL        TCGA-EM-A3AN        TCGA-EM-A3AO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3FJ        TCGA-EM-A3FL        TCGA-EM-A3FN        TCGA-EM-A3FO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3FP        TCGA-ET-A25G        TCGA-ET-A25O        TCGA-ET-A2MY 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A2MZ        TCGA-ET-A2N0        TCGA-ET-A2N1        TCGA-ET-A2N4 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A2N5        TCGA-ET-A39I        TCGA-ET-A39J        TCGA-ET-A39L 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A39M        TCGA-ET-A39N        TCGA-ET-A39P        TCGA-ET-A39R 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A39T        TCGA-ET-A3BN        TCGA-ET-A3BP        TCGA-ET-A3BS 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3BT        TCGA-ET-A3BU        TCGA-ET-A3BV        TCGA-ET-A3BW 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3BX        TCGA-ET-A3DO        TCGA-ET-A3DP        TCGA-ET-A3DS 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3DT        TCGA-ET-A3DV        TCGA-ET-A3DW        TCGA-FE-A22Z 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FE-A230        TCGA-FE-A231        TCGA-FE-A232        TCGA-FE-A233 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FE-A234        TCGA-FE-A235        TCGA-FE-A236        TCGA-FE-A237 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FE-A23A        TCGA-FY-A2QD        TCGA-FY-A3BL        TCGA-FY-A3ON 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-GE-A2C6        TCGA-H2-A2K9        TCGA-IM-A3EB        TCGA-IM-A3ED 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-J8-A3NZ        TCGA-J8-A3O0        TCGA-J8-A3O1 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
D27V4, multiclass
[1] "Remove cluster labels:" "SLC5A11 MUTATED"       
clus
  SLC5A11 MUTATED SLC5A11 WILD-TYPE 
                2               215 
       TCGA-BJ-A0YZ        TCGA-BJ-A0Z0        TCGA-BJ-A0Z2        TCGA-BJ-A0Z3 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A0Z5        TCGA-BJ-A0Z9        TCGA-BJ-A0ZA        TCGA-BJ-A0ZB 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A0ZC        TCGA-BJ-A0ZE        TCGA-BJ-A0ZF        TCGA-BJ-A0ZG 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A0ZJ        TCGA-BJ-A18Y        TCGA-BJ-A18Z        TCGA-BJ-A190 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A191        TCGA-BJ-A192        TCGA-BJ-A28R        TCGA-BJ-A28S 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A28T        TCGA-BJ-A28V        TCGA-BJ-A28Z        TCGA-BJ-A290 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A2N7        TCGA-BJ-A2N9        TCGA-BJ-A2NA        TCGA-BJ-A2P4 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A3EZ        TCGA-BJ-A3F0        TCGA-CE-A13K        TCGA-CE-A27D 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-CE-A3MD        TCGA-CE-A3ME        TCGA-DE-A0Y2        TCGA-DE-A2OL 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DE-A3KN        TCGA-DJ-A13M        TCGA-DJ-A13O        TCGA-DJ-A13R 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A13V        TCGA-DJ-A13W        TCGA-DJ-A13X        TCGA-DJ-A1QD 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A1QE        TCGA-DJ-A1QF        TCGA-DJ-A1QG        TCGA-DJ-A1QI 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A1QL        TCGA-DJ-A1QM        TCGA-DJ-A1QN        TCGA-DJ-A1QO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PN        TCGA-DJ-A2PO        TCGA-DJ-A2PP        TCGA-DJ-A2PQ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PR        TCGA-DJ-A2PS        TCGA-DJ-A2PU        TCGA-DJ-A2PV 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PW        TCGA-DJ-A2PY        TCGA-DJ-A2PZ        TCGA-DJ-A2Q0 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2Q1        TCGA-DJ-A2Q2        TCGA-DJ-A2Q4        TCGA-DJ-A2Q5 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2Q6        TCGA-DJ-A2Q7        TCGA-DJ-A2Q8        TCGA-DJ-A2Q9 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2QA        TCGA-DJ-A2QB        TCGA-DJ-A2QC        TCGA-DO-A1JZ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DO-A1K0        TCGA-E3-A3DY        TCGA-E3-A3DZ        TCGA-E3-A3E0 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-E3-A3E1        TCGA-E3-A3E3        TCGA-E3-A3E5        TCGA-E8-A2EA 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CL        TCGA-EL-A3CM        TCGA-EL-A3CN        TCGA-EL-A3CO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CP        TCGA-EL-A3CR        TCGA-EL-A3CS        TCGA-EL-A3CT 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CU        TCGA-EL-A3CV        TCGA-EL-A3CW        TCGA-EL-A3CX 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CY        TCGA-EL-A3CZ        TCGA-EL-A3D0        TCGA-EL-A3D1 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3D4        TCGA-EL-A3D5        TCGA-EL-A3D6        TCGA-EL-A3GO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3GP        TCGA-EL-A3GQ        TCGA-EL-A3GR        TCGA-EL-A3GS 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3GU        TCGA-EL-A3GV        TCGA-EL-A3GW        TCGA-EL-A3GX 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3GY        TCGA-EL-A3GZ        TCGA-EL-A3H1        TCGA-EL-A3H2 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3H3        TCGA-EL-A3H4        TCGA-EL-A3H5        TCGA-EL-A3H7 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3H8        TCGA-EL-A3MW        TCGA-EL-A3MX        TCGA-EL-A3MY 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3MZ        TCGA-EL-A3N2        TCGA-EL-A3N3        TCGA-EM-A1CT 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A1CU        TCGA-EM-A1CV        TCGA-EM-A1CW        TCGA-EM-A1YA 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A1YB        TCGA-EM-A1YC        TCGA-EM-A1YD        TCGA-EM-A1YE 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A22I        TCGA-EM-A22J        TCGA-EM-A22L        TCGA-EM-A22M 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A22O        TCGA-EM-A22Q        TCGA-EM-A2CJ        TCGA-EM-A2CK 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2CL        TCGA-EM-A2CM        TCGA-EM-A2CN        TCGA-EM-A2CO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2CP        TCGA-EM-A2CQ        TCGA-EM-A2CR        TCGA-EM-A2CU 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2OV        TCGA-EM-A2OY        TCGA-EM-A2P1        TCGA-EM-A3AI 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3AJ        TCGA-EM-A3AL        TCGA-EM-A3AN        TCGA-EM-A3AO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3FJ        TCGA-EM-A3FL        TCGA-EM-A3FN        TCGA-EM-A3FO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3FP        TCGA-ET-A25G        TCGA-ET-A25O        TCGA-ET-A2MY 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A2MZ        TCGA-ET-A2N0        TCGA-ET-A2N1        TCGA-ET-A2N4 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A2N5        TCGA-ET-A39I        TCGA-ET-A39J        TCGA-ET-A39L 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A39M        TCGA-ET-A39N        TCGA-ET-A39P        TCGA-ET-A39R 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A39T        TCGA-ET-A3BN        TCGA-ET-A3BP        TCGA-ET-A3BS 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3BT        TCGA-ET-A3BU        TCGA-ET-A3BV        TCGA-ET-A3BW 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3BX        TCGA-ET-A3DO        TCGA-ET-A3DP        TCGA-ET-A3DS 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3DT        TCGA-ET-A3DV        TCGA-ET-A3DW        TCGA-FE-A22Z 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FE-A230        TCGA-FE-A231        TCGA-FE-A232        TCGA-FE-A233 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FE-A234        TCGA-FE-A235        TCGA-FE-A236        TCGA-FE-A237 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FE-A23A        TCGA-FY-A2QD        TCGA-FY-A3BL        TCGA-FY-A3ON 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-GE-A2C6        TCGA-H2-A2K9        TCGA-IM-A3EB        TCGA-IM-A3ED 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-J8-A3NZ        TCGA-J8-A3O0        TCGA-J8-A3O1 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
D27V5, multiclass
[1] "Remove cluster labels:" "SLC5A11 MUTATED"       
clus
  SLC5A11 MUTATED SLC5A11 WILD-TYPE 
                2               301 
       TCGA-BJ-A0YZ        TCGA-BJ-A0Z0        TCGA-BJ-A0Z2        TCGA-BJ-A0Z3 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A0Z5        TCGA-BJ-A0Z9        TCGA-BJ-A0ZA        TCGA-BJ-A0ZB 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A0ZC        TCGA-BJ-A0ZE        TCGA-BJ-A0ZF        TCGA-BJ-A0ZG 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A0ZH        TCGA-BJ-A0ZJ        TCGA-BJ-A18Y        TCGA-BJ-A18Z 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A190        TCGA-BJ-A192        TCGA-BJ-A28R        TCGA-BJ-A28S 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A28T        TCGA-BJ-A28V        TCGA-BJ-A28X        TCGA-BJ-A28Z 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A290        TCGA-BJ-A2N7        TCGA-BJ-A2N8        TCGA-BJ-A2N9 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A2NA        TCGA-BJ-A2P4        TCGA-BJ-A3EZ        TCGA-BJ-A3PR 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A3PT        TCGA-BJ-A3PU        TCGA-CE-A13K        TCGA-CE-A27D 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-CE-A3MD        TCGA-CE-A3ME        TCGA-DE-A0XZ        TCGA-DE-A0Y2 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DE-A0Y3        TCGA-DE-A2OL        TCGA-DE-A3KN        TCGA-DJ-A13L 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A13M        TCGA-DJ-A13O        TCGA-DJ-A13P        TCGA-DJ-A13R 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A13T        TCGA-DJ-A13U        TCGA-DJ-A13V        TCGA-DJ-A13W 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A13X        TCGA-DJ-A1QD        TCGA-DJ-A1QE        TCGA-DJ-A1QF 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A1QG        TCGA-DJ-A1QH        TCGA-DJ-A1QI        TCGA-DJ-A1QL 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A1QM        TCGA-DJ-A1QN        TCGA-DJ-A1QO        TCGA-DJ-A1QQ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PN        TCGA-DJ-A2PO        TCGA-DJ-A2PP        TCGA-DJ-A2PQ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PR        TCGA-DJ-A2PS        TCGA-DJ-A2PT        TCGA-DJ-A2PU 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PV        TCGA-DJ-A2PW        TCGA-DJ-A2PX        TCGA-DJ-A2PY 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PZ        TCGA-DJ-A2Q0        TCGA-DJ-A2Q1        TCGA-DJ-A2Q2 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2Q3        TCGA-DJ-A2Q4        TCGA-DJ-A2Q5        TCGA-DJ-A2Q6 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2Q7        TCGA-DJ-A2Q9        TCGA-DJ-A2QA        TCGA-DJ-A2QB 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2QC        TCGA-DJ-A3UK        TCGA-DJ-A3UM        TCGA-DJ-A3UN 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A3UO        TCGA-DJ-A3UP        TCGA-DJ-A3UQ        TCGA-DJ-A3UR 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A3US        TCGA-DJ-A3UT        TCGA-DJ-A3UU        TCGA-DJ-A3UV 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A3UW        TCGA-DJ-A3UX        TCGA-DJ-A3UY        TCGA-DO-A1JZ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DO-A1K0        TCGA-DO-A2HM        TCGA-E3-A3DY        TCGA-E3-A3DZ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-E3-A3E0        TCGA-E3-A3E1        TCGA-E3-A3E2        TCGA-E3-A3E3 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-E3-A3E5        TCGA-E8-A242        TCGA-E8-A2EA        TCGA-EL-A3CL 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CM        TCGA-EL-A3CN        TCGA-EL-A3CO        TCGA-EL-A3CP 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CR        TCGA-EL-A3CS        TCGA-EL-A3CT        TCGA-EL-A3CU 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CV        TCGA-EL-A3CW        TCGA-EL-A3CX        TCGA-EL-A3CY 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CZ        TCGA-EL-A3D0        TCGA-EL-A3D5        TCGA-EL-A3D6 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3GO        TCGA-EL-A3GP        TCGA-EL-A3GQ        TCGA-EL-A3GR 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3GS        TCGA-EL-A3GU        TCGA-EL-A3GV        TCGA-EL-A3GW 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3GX        TCGA-EL-A3GY        TCGA-EL-A3GZ        TCGA-EL-A3H1 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3H2        TCGA-EL-A3H3        TCGA-EL-A3H4        TCGA-EL-A3H5 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3H7        TCGA-EL-A3H8        TCGA-EL-A3MW        TCGA-EL-A3MX 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3MY        TCGA-EL-A3MZ        TCGA-EL-A3N2        TCGA-EL-A3N3 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3T0        TCGA-EL-A3T1        TCGA-EL-A3T2        TCGA-EL-A3T3 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3T6        TCGA-EL-A3T7        TCGA-EL-A3T8        TCGA-EL-A3T9 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3TA        TCGA-EL-A3TB        TCGA-EM-A1CS        TCGA-EM-A1CT 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A1CU        TCGA-EM-A1CV        TCGA-EM-A1CW        TCGA-EM-A1YA 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A1YB        TCGA-EM-A1YC        TCGA-EM-A1YD        TCGA-EM-A1YE 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A22I        TCGA-EM-A22J        TCGA-EM-A22K        TCGA-EM-A22L 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A22N        TCGA-EM-A22P        TCGA-EM-A2CK        TCGA-EM-A2CL 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2CM        TCGA-EM-A2CN        TCGA-EM-A2CO        TCGA-EM-A2CP 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2CQ        TCGA-EM-A2CT        TCGA-EM-A2OV        TCGA-EM-A2OW 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2OX        TCGA-EM-A2OY        TCGA-EM-A2P0        TCGA-EM-A2P1 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2P2        TCGA-EM-A2P3        TCGA-EM-A3AI        TCGA-EM-A3AJ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3AK        TCGA-EM-A3AL        TCGA-EM-A3AN        TCGA-EM-A3AO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3AQ        TCGA-EM-A3AR        TCGA-EM-A3FJ        TCGA-EM-A3FK 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3FL        TCGA-EM-A3FM        TCGA-EM-A3FN        TCGA-EM-A3FO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3FP        TCGA-EM-A3FQ        TCGA-EM-A3FR        TCGA-EM-A3O3 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3O6        TCGA-EM-A3O7        TCGA-EM-A3O8        TCGA-EM-A3O9 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3OA        TCGA-EM-A3OB        TCGA-ET-A25G        TCGA-ET-A25I 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A25J        TCGA-ET-A25K        TCGA-ET-A25O        TCGA-ET-A25R 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A2MY        TCGA-ET-A2MZ        TCGA-ET-A2N0        TCGA-ET-A2N4 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A2N5        TCGA-ET-A39I        TCGA-ET-A39J        TCGA-ET-A39L 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A39N        TCGA-ET-A39O        TCGA-ET-A39P        TCGA-ET-A39R 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A39S        TCGA-ET-A39T        TCGA-ET-A3BN        TCGA-ET-A3BO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3BP        TCGA-ET-A3BQ        TCGA-ET-A3BS        TCGA-ET-A3BT 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3BU        TCGA-ET-A3BW        TCGA-ET-A3BX        TCGA-ET-A3DO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3DP        TCGA-ET-A3DQ        TCGA-ET-A3DR        TCGA-ET-A3DS 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3DV        TCGA-ET-A3DW        TCGA-FE-A22Z        TCGA-FE-A230 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FE-A231        TCGA-FE-A233        TCGA-FE-A234        TCGA-FE-A236 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FE-A237        TCGA-FE-A23A        TCGA-FE-A3PB        TCGA-FE-A3PC 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FE-A3PD        TCGA-FK-A3S3        TCGA-FK-A3SB        TCGA-FK-A3SD 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FK-A3SE        TCGA-FK-A3SG        TCGA-FY-A2QD        TCGA-FY-A3BL 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FY-A3I4        TCGA-FY-A3I5        TCGA-FY-A3NM        TCGA-FY-A3NN 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FY-A3NP        TCGA-FY-A3ON        TCGA-FY-A3R6        TCGA-FY-A3R7 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FY-A3R8        TCGA-FY-A3R9        TCGA-FY-A3RA        TCGA-FY-A3W9 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FY-A3WA        TCGA-GE-A2C6        TCGA-H2-A26U        TCGA-H2-A2K9 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-H2-A3RH        TCGA-H2-A3RI        TCGA-IM-A3EB        TCGA-IM-A3ED 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-IM-A3U2        TCGA-IM-A3U3        TCGA-J8-A3NZ        TCGA-J8-A3O0 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-J8-A3O1 
"SLC5A11 WILD-TYPE" 
D27V6, multiclass
[1] "Remove cluster labels:" "SLC5A11 MUTATED"       
clus
  SLC5A11 MUTATED SLC5A11 WILD-TYPE 
                2               301 
       TCGA-BJ-A0YZ        TCGA-BJ-A0Z0        TCGA-BJ-A0Z2        TCGA-BJ-A0Z3 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A0Z5        TCGA-BJ-A0Z9        TCGA-BJ-A0ZA        TCGA-BJ-A0ZB 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A0ZC        TCGA-BJ-A0ZE        TCGA-BJ-A0ZF        TCGA-BJ-A0ZG 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A0ZH        TCGA-BJ-A0ZJ        TCGA-BJ-A18Y        TCGA-BJ-A18Z 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A190        TCGA-BJ-A192        TCGA-BJ-A28R        TCGA-BJ-A28S 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A28T        TCGA-BJ-A28V        TCGA-BJ-A28X        TCGA-BJ-A28Z 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A290        TCGA-BJ-A2N7        TCGA-BJ-A2N8        TCGA-BJ-A2N9 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A2NA        TCGA-BJ-A2P4        TCGA-BJ-A3EZ        TCGA-BJ-A3PR 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-BJ-A3PT        TCGA-BJ-A3PU        TCGA-CE-A13K        TCGA-CE-A27D 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-CE-A3MD        TCGA-CE-A3ME        TCGA-DE-A0XZ        TCGA-DE-A0Y2 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DE-A0Y3        TCGA-DE-A2OL        TCGA-DE-A3KN        TCGA-DJ-A13L 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A13M        TCGA-DJ-A13O        TCGA-DJ-A13P        TCGA-DJ-A13R 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A13T        TCGA-DJ-A13U        TCGA-DJ-A13V        TCGA-DJ-A13W 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A13X        TCGA-DJ-A1QD        TCGA-DJ-A1QE        TCGA-DJ-A1QF 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A1QG        TCGA-DJ-A1QH        TCGA-DJ-A1QI        TCGA-DJ-A1QL 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A1QM        TCGA-DJ-A1QN        TCGA-DJ-A1QO        TCGA-DJ-A1QQ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PN        TCGA-DJ-A2PO        TCGA-DJ-A2PP        TCGA-DJ-A2PQ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PR        TCGA-DJ-A2PS        TCGA-DJ-A2PT        TCGA-DJ-A2PU 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PV        TCGA-DJ-A2PW        TCGA-DJ-A2PX        TCGA-DJ-A2PY 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2PZ        TCGA-DJ-A2Q0        TCGA-DJ-A2Q1        TCGA-DJ-A2Q2 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2Q3        TCGA-DJ-A2Q4        TCGA-DJ-A2Q5        TCGA-DJ-A2Q6 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2Q7        TCGA-DJ-A2Q9        TCGA-DJ-A2QA        TCGA-DJ-A2QB 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A2QC        TCGA-DJ-A3UK        TCGA-DJ-A3UM        TCGA-DJ-A3UN 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A3UO        TCGA-DJ-A3UP        TCGA-DJ-A3UQ        TCGA-DJ-A3UR 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A3US        TCGA-DJ-A3UT        TCGA-DJ-A3UU        TCGA-DJ-A3UV 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DJ-A3UW        TCGA-DJ-A3UX        TCGA-DJ-A3UY        TCGA-DO-A1JZ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-DO-A1K0        TCGA-DO-A2HM        TCGA-E3-A3DY        TCGA-E3-A3DZ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-E3-A3E0        TCGA-E3-A3E1        TCGA-E3-A3E2        TCGA-E3-A3E3 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-E3-A3E5        TCGA-E8-A242        TCGA-E8-A2EA        TCGA-EL-A3CL 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CM        TCGA-EL-A3CN        TCGA-EL-A3CO        TCGA-EL-A3CP 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CR        TCGA-EL-A3CS        TCGA-EL-A3CT        TCGA-EL-A3CU 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CV        TCGA-EL-A3CW        TCGA-EL-A3CX        TCGA-EL-A3CY 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3CZ        TCGA-EL-A3D0        TCGA-EL-A3D5        TCGA-EL-A3D6 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3GO        TCGA-EL-A3GP        TCGA-EL-A3GQ        TCGA-EL-A3GR 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3GS        TCGA-EL-A3GU        TCGA-EL-A3GV        TCGA-EL-A3GW 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3GX        TCGA-EL-A3GY        TCGA-EL-A3GZ        TCGA-EL-A3H1 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3H2        TCGA-EL-A3H3        TCGA-EL-A3H4        TCGA-EL-A3H5 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3H7        TCGA-EL-A3H8        TCGA-EL-A3MW        TCGA-EL-A3MX 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3MY        TCGA-EL-A3MZ        TCGA-EL-A3N2        TCGA-EL-A3N3 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3T0        TCGA-EL-A3T1        TCGA-EL-A3T2        TCGA-EL-A3T3 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3T6        TCGA-EL-A3T7        TCGA-EL-A3T8        TCGA-EL-A3T9 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EL-A3TA        TCGA-EL-A3TB        TCGA-EM-A1CS        TCGA-EM-A1CT 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A1CU        TCGA-EM-A1CV        TCGA-EM-A1CW        TCGA-EM-A1YA 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A1YB        TCGA-EM-A1YC        TCGA-EM-A1YD        TCGA-EM-A1YE 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A22I        TCGA-EM-A22J        TCGA-EM-A22K        TCGA-EM-A22L 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A22N        TCGA-EM-A22P        TCGA-EM-A2CK        TCGA-EM-A2CL 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2CM        TCGA-EM-A2CN        TCGA-EM-A2CO        TCGA-EM-A2CP 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2CQ        TCGA-EM-A2CT        TCGA-EM-A2OV        TCGA-EM-A2OW 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2OX        TCGA-EM-A2OY        TCGA-EM-A2P0        TCGA-EM-A2P1 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A2P2        TCGA-EM-A2P3        TCGA-EM-A3AI        TCGA-EM-A3AJ 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3AK        TCGA-EM-A3AL        TCGA-EM-A3AN        TCGA-EM-A3AO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3AQ        TCGA-EM-A3AR        TCGA-EM-A3FJ        TCGA-EM-A3FK 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3FL        TCGA-EM-A3FM        TCGA-EM-A3FN        TCGA-EM-A3FO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3FP        TCGA-EM-A3FQ        TCGA-EM-A3FR        TCGA-EM-A3O3 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3O6        TCGA-EM-A3O7        TCGA-EM-A3O8        TCGA-EM-A3O9 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-EM-A3OA        TCGA-EM-A3OB        TCGA-ET-A25G        TCGA-ET-A25I 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A25J        TCGA-ET-A25K        TCGA-ET-A25O        TCGA-ET-A25R 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A2MY        TCGA-ET-A2MZ        TCGA-ET-A2N0        TCGA-ET-A2N4 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A2N5        TCGA-ET-A39I        TCGA-ET-A39J        TCGA-ET-A39L 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A39N        TCGA-ET-A39O        TCGA-ET-A39P        TCGA-ET-A39R 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A39S        TCGA-ET-A39T        TCGA-ET-A3BN        TCGA-ET-A3BO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3BP        TCGA-ET-A3BQ        TCGA-ET-A3BS        TCGA-ET-A3BT 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3BU        TCGA-ET-A3BW        TCGA-ET-A3BX        TCGA-ET-A3DO 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3DP        TCGA-ET-A3DQ        TCGA-ET-A3DR        TCGA-ET-A3DS 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-ET-A3DV        TCGA-ET-A3DW        TCGA-FE-A22Z        TCGA-FE-A230 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FE-A231        TCGA-FE-A233        TCGA-FE-A234        TCGA-FE-A236 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FE-A237        TCGA-FE-A23A        TCGA-FE-A3PB        TCGA-FE-A3PC 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FE-A3PD        TCGA-FK-A3S3        TCGA-FK-A3SB        TCGA-FK-A3SD 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FK-A3SE        TCGA-FK-A3SG        TCGA-FY-A2QD        TCGA-FY-A3BL 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FY-A3I4        TCGA-FY-A3I5        TCGA-FY-A3NM        TCGA-FY-A3NN 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FY-A3NP        TCGA-FY-A3ON        TCGA-FY-A3R6        TCGA-FY-A3R7 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FY-A3R8        TCGA-FY-A3R9        TCGA-FY-A3RA        TCGA-FY-A3W9 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-FY-A3WA        TCGA-GE-A2C6        TCGA-H2-A26U        TCGA-H2-A2K9 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-H2-A3RH        TCGA-H2-A3RI        TCGA-IM-A3EB        TCGA-IM-A3ED 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-IM-A3U2        TCGA-IM-A3U3        TCGA-J8-A3NZ        TCGA-J8-A3O0 
"SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" "SLC5A11 WILD-TYPE" 
       TCGA-J8-A3O1 
"SLC5A11 WILD-TYPE" 
D27V7, multiclass
        clus
vv       SLC5A11 MUTATED SLC5A11 WILD-TYPE
  CLUS_1               2               103
  CLUS_2               0               116
  CLUS_3               1               100
D27V8, multiclass
        clus
vv       SLC5A11 MUTATED SLC5A11 WILD-TYPE
  CLUS_1               2                95
  CLUS_2               1               121
  CLUS_3               0               103

Clustering(28) Variable = PRG4 MUTATION ANALYSIS
D28V1, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            1             25
  CLUS_2            2            242
  CLUS_3            1             47
D28V2, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            0            105
  CLUS_2            1             43
  CLUS_3            3            171
D28V3, multiclass
[1] "Remove cluster labels:" "PRG4 MUTATED"          
clus
  PRG4 MUTATED PRG4 WILD-TYPE 
             1            216 
    TCGA-BJ-A0YZ     TCGA-BJ-A0Z0     TCGA-BJ-A0Z2     TCGA-BJ-A0Z3 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A0Z5     TCGA-BJ-A0Z9     TCGA-BJ-A0ZA     TCGA-BJ-A0ZB 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A0ZC     TCGA-BJ-A0ZE     TCGA-BJ-A0ZF     TCGA-BJ-A0ZG 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A0ZJ     TCGA-BJ-A18Y     TCGA-BJ-A18Z     TCGA-BJ-A190 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A191     TCGA-BJ-A192     TCGA-BJ-A28R     TCGA-BJ-A28S 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A28T     TCGA-BJ-A28V     TCGA-BJ-A28Z     TCGA-BJ-A290 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A2N7     TCGA-BJ-A2N9     TCGA-BJ-A2NA     TCGA-BJ-A2P4 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A3EZ     TCGA-BJ-A3F0     TCGA-CE-A13K     TCGA-CE-A27D 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-CE-A3MD     TCGA-CE-A3ME     TCGA-DE-A0Y2     TCGA-DE-A2OL 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DE-A3KN     TCGA-DJ-A13M     TCGA-DJ-A13O     TCGA-DJ-A13R 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A13S     TCGA-DJ-A13V     TCGA-DJ-A13W     TCGA-DJ-A13X 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A1QD     TCGA-DJ-A1QE     TCGA-DJ-A1QF     TCGA-DJ-A1QG 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A1QI     TCGA-DJ-A1QL     TCGA-DJ-A1QM     TCGA-DJ-A1QN 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A1QO     TCGA-DJ-A2PN     TCGA-DJ-A2PO     TCGA-DJ-A2PP 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A2PQ     TCGA-DJ-A2PR     TCGA-DJ-A2PS     TCGA-DJ-A2PU 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A2PV     TCGA-DJ-A2PW     TCGA-DJ-A2PY     TCGA-DJ-A2PZ 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A2Q0     TCGA-DJ-A2Q1     TCGA-DJ-A2Q2     TCGA-DJ-A2Q4 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A2Q5     TCGA-DJ-A2Q6     TCGA-DJ-A2Q7     TCGA-DJ-A2Q8 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A2Q9     TCGA-DJ-A2QA     TCGA-DJ-A2QB     TCGA-DJ-A2QC 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DO-A1JZ     TCGA-DO-A1K0     TCGA-E3-A3DZ     TCGA-E3-A3E0 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-E3-A3E1     TCGA-E3-A3E3     TCGA-E3-A3E5     TCGA-E8-A2EA 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3CL     TCGA-EL-A3CM     TCGA-EL-A3CN     TCGA-EL-A3CO 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3CP     TCGA-EL-A3CR     TCGA-EL-A3CS     TCGA-EL-A3CT 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3CU     TCGA-EL-A3CV     TCGA-EL-A3CW     TCGA-EL-A3CX 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3CY     TCGA-EL-A3CZ     TCGA-EL-A3D0     TCGA-EL-A3D1 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3D4     TCGA-EL-A3D5     TCGA-EL-A3D6     TCGA-EL-A3GO 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3GP     TCGA-EL-A3GQ     TCGA-EL-A3GR     TCGA-EL-A3GS 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3GU     TCGA-EL-A3GV     TCGA-EL-A3GW     TCGA-EL-A3GX 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3GY     TCGA-EL-A3GZ     TCGA-EL-A3H1     TCGA-EL-A3H2 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3H3     TCGA-EL-A3H4     TCGA-EL-A3H5     TCGA-EL-A3H7 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3H8     TCGA-EL-A3MW     TCGA-EL-A3MX     TCGA-EL-A3MY 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3MZ     TCGA-EL-A3N2     TCGA-EL-A3N3     TCGA-EM-A1CT 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A1CU     TCGA-EM-A1CV     TCGA-EM-A1CW     TCGA-EM-A1YA 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A1YB     TCGA-EM-A1YC     TCGA-EM-A1YD     TCGA-EM-A1YE 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A22I     TCGA-EM-A22J     TCGA-EM-A22L     TCGA-EM-A22M 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A22O     TCGA-EM-A22Q     TCGA-EM-A2CJ     TCGA-EM-A2CK 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A2CL     TCGA-EM-A2CM     TCGA-EM-A2CN     TCGA-EM-A2CO 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A2CP     TCGA-EM-A2CQ     TCGA-EM-A2CR     TCGA-EM-A2CU 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A2OV     TCGA-EM-A2OY     TCGA-EM-A2P1     TCGA-EM-A3AI 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A3AJ     TCGA-EM-A3AL     TCGA-EM-A3AN     TCGA-EM-A3AO 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A3AP     TCGA-EM-A3FJ     TCGA-EM-A3FL     TCGA-EM-A3FN 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A3FO     TCGA-EM-A3FP     TCGA-ET-A25G     TCGA-ET-A25O 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A2MY     TCGA-ET-A2MZ     TCGA-ET-A2N0     TCGA-ET-A2N1 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A2N4     TCGA-ET-A2N5     TCGA-ET-A39I     TCGA-ET-A39J 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A39L     TCGA-ET-A39M     TCGA-ET-A39N     TCGA-ET-A39P 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A39R     TCGA-ET-A39T     TCGA-ET-A3BN     TCGA-ET-A3BP 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A3BS     TCGA-ET-A3BT     TCGA-ET-A3BU     TCGA-ET-A3BV 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A3BW     TCGA-ET-A3BX     TCGA-ET-A3DO     TCGA-ET-A3DP 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A3DS     TCGA-ET-A3DT     TCGA-ET-A3DV     TCGA-ET-A3DW 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-FE-A22Z     TCGA-FE-A230     TCGA-FE-A231     TCGA-FE-A232 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-FE-A233     TCGA-FE-A234     TCGA-FE-A235     TCGA-FE-A236 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-FE-A237     TCGA-FE-A23A     TCGA-FY-A2QD     TCGA-FY-A3BL 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-FY-A3ON     TCGA-GE-A2C6     TCGA-H2-A2K9     TCGA-IM-A3EB 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-IM-A3ED     TCGA-J8-A3NZ     TCGA-J8-A3O0     TCGA-J8-A3O1 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
D28V4, multiclass
[1] "Remove cluster labels:" "PRG4 MUTATED"          
clus
  PRG4 MUTATED PRG4 WILD-TYPE 
             1            216 
    TCGA-BJ-A0YZ     TCGA-BJ-A0Z0     TCGA-BJ-A0Z2     TCGA-BJ-A0Z3 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A0Z5     TCGA-BJ-A0Z9     TCGA-BJ-A0ZA     TCGA-BJ-A0ZB 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A0ZC     TCGA-BJ-A0ZE     TCGA-BJ-A0ZF     TCGA-BJ-A0ZG 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A0ZJ     TCGA-BJ-A18Y     TCGA-BJ-A18Z     TCGA-BJ-A190 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A191     TCGA-BJ-A192     TCGA-BJ-A28R     TCGA-BJ-A28S 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A28T     TCGA-BJ-A28V     TCGA-BJ-A28Z     TCGA-BJ-A290 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A2N7     TCGA-BJ-A2N9     TCGA-BJ-A2NA     TCGA-BJ-A2P4 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-BJ-A3EZ     TCGA-BJ-A3F0     TCGA-CE-A13K     TCGA-CE-A27D 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-CE-A3MD     TCGA-CE-A3ME     TCGA-DE-A0Y2     TCGA-DE-A2OL 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DE-A3KN     TCGA-DJ-A13M     TCGA-DJ-A13O     TCGA-DJ-A13R 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A13S     TCGA-DJ-A13V     TCGA-DJ-A13W     TCGA-DJ-A13X 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A1QD     TCGA-DJ-A1QE     TCGA-DJ-A1QF     TCGA-DJ-A1QG 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A1QI     TCGA-DJ-A1QL     TCGA-DJ-A1QM     TCGA-DJ-A1QN 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A1QO     TCGA-DJ-A2PN     TCGA-DJ-A2PO     TCGA-DJ-A2PP 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A2PQ     TCGA-DJ-A2PR     TCGA-DJ-A2PS     TCGA-DJ-A2PU 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A2PV     TCGA-DJ-A2PW     TCGA-DJ-A2PY     TCGA-DJ-A2PZ 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A2Q0     TCGA-DJ-A2Q1     TCGA-DJ-A2Q2     TCGA-DJ-A2Q4 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A2Q5     TCGA-DJ-A2Q6     TCGA-DJ-A2Q7     TCGA-DJ-A2Q8 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DJ-A2Q9     TCGA-DJ-A2QA     TCGA-DJ-A2QB     TCGA-DJ-A2QC 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-DO-A1JZ     TCGA-DO-A1K0     TCGA-E3-A3DZ     TCGA-E3-A3E0 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-E3-A3E1     TCGA-E3-A3E3     TCGA-E3-A3E5     TCGA-E8-A2EA 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3CL     TCGA-EL-A3CM     TCGA-EL-A3CN     TCGA-EL-A3CO 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3CP     TCGA-EL-A3CR     TCGA-EL-A3CS     TCGA-EL-A3CT 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3CU     TCGA-EL-A3CV     TCGA-EL-A3CW     TCGA-EL-A3CX 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3CY     TCGA-EL-A3CZ     TCGA-EL-A3D0     TCGA-EL-A3D1 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3D4     TCGA-EL-A3D5     TCGA-EL-A3D6     TCGA-EL-A3GO 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3GP     TCGA-EL-A3GQ     TCGA-EL-A3GR     TCGA-EL-A3GS 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3GU     TCGA-EL-A3GV     TCGA-EL-A3GW     TCGA-EL-A3GX 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3GY     TCGA-EL-A3GZ     TCGA-EL-A3H1     TCGA-EL-A3H2 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3H3     TCGA-EL-A3H4     TCGA-EL-A3H5     TCGA-EL-A3H7 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3H8     TCGA-EL-A3MW     TCGA-EL-A3MX     TCGA-EL-A3MY 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EL-A3MZ     TCGA-EL-A3N2     TCGA-EL-A3N3     TCGA-EM-A1CT 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A1CU     TCGA-EM-A1CV     TCGA-EM-A1CW     TCGA-EM-A1YA 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A1YB     TCGA-EM-A1YC     TCGA-EM-A1YD     TCGA-EM-A1YE 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A22I     TCGA-EM-A22J     TCGA-EM-A22L     TCGA-EM-A22M 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A22O     TCGA-EM-A22Q     TCGA-EM-A2CJ     TCGA-EM-A2CK 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A2CL     TCGA-EM-A2CM     TCGA-EM-A2CN     TCGA-EM-A2CO 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A2CP     TCGA-EM-A2CQ     TCGA-EM-A2CR     TCGA-EM-A2CU 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A2OV     TCGA-EM-A2OY     TCGA-EM-A2P1     TCGA-EM-A3AI 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A3AJ     TCGA-EM-A3AL     TCGA-EM-A3AN     TCGA-EM-A3AO 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A3AP     TCGA-EM-A3FJ     TCGA-EM-A3FL     TCGA-EM-A3FN 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-EM-A3FO     TCGA-EM-A3FP     TCGA-ET-A25G     TCGA-ET-A25O 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A2MY     TCGA-ET-A2MZ     TCGA-ET-A2N0     TCGA-ET-A2N1 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A2N4     TCGA-ET-A2N5     TCGA-ET-A39I     TCGA-ET-A39J 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A39L     TCGA-ET-A39M     TCGA-ET-A39N     TCGA-ET-A39P 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A39R     TCGA-ET-A39T     TCGA-ET-A3BN     TCGA-ET-A3BP 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A3BS     TCGA-ET-A3BT     TCGA-ET-A3BU     TCGA-ET-A3BV 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A3BW     TCGA-ET-A3BX     TCGA-ET-A3DO     TCGA-ET-A3DP 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-ET-A3DS     TCGA-ET-A3DT     TCGA-ET-A3DV     TCGA-ET-A3DW 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-FE-A22Z     TCGA-FE-A230     TCGA-FE-A231     TCGA-FE-A232 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-FE-A233     TCGA-FE-A234     TCGA-FE-A235     TCGA-FE-A236 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-FE-A237     TCGA-FE-A23A     TCGA-FY-A2QD     TCGA-FY-A3BL 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-FY-A3ON     TCGA-GE-A2C6     TCGA-H2-A2K9     TCGA-IM-A3EB 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-IM-A3ED     TCGA-J8-A3NZ     TCGA-J8-A3O0     TCGA-J8-A3O1 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
D28V5, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            0            102
  CLUS_2            2             34
  CLUS_3            2             68
  CLUS_4            0             95
D28V6, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            0            110
  CLUS_2            4            132
  CLUS_3            0             57
D28V7, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            0            105
  CLUS_2            2            114
  CLUS_3            2             99
D28V8, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            0             97
  CLUS_2            2            120
  CLUS_3            2            101

Clustering(29) Variable = SCUBE2 MUTATION ANALYSIS
D29V1, multiclass
[1] "Remove cluster labels:" "SCUBE2 MUTATED"        
clus
  SCUBE2 MUTATED SCUBE2 WILD-TYPE 
               2              316 
      TCGA-BJ-A0YZ       TCGA-BJ-A0Z0       TCGA-BJ-A0Z2       TCGA-BJ-A0Z3 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A0Z5       TCGA-BJ-A0Z9       TCGA-BJ-A0ZA       TCGA-BJ-A0ZB 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A0ZC       TCGA-BJ-A0ZE       TCGA-BJ-A0ZG       TCGA-BJ-A0ZH 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A0ZJ       TCGA-BJ-A18Y       TCGA-BJ-A18Z       TCGA-BJ-A190 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A191       TCGA-BJ-A192       TCGA-BJ-A28R       TCGA-BJ-A28S 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A28T       TCGA-BJ-A28V       TCGA-BJ-A28X       TCGA-BJ-A28Z 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A290       TCGA-BJ-A2N7       TCGA-BJ-A2N8       TCGA-BJ-A2N9 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A2NA       TCGA-BJ-A2P4       TCGA-BJ-A3EZ       TCGA-BJ-A3F0 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A3PR       TCGA-BJ-A3PT       TCGA-BJ-A3PU       TCGA-CE-A13K 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-CE-A27D       TCGA-CE-A3MD       TCGA-CE-A3ME       TCGA-DE-A0XZ 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DE-A0Y2       TCGA-DE-A0Y3       TCGA-DE-A2OL       TCGA-DE-A3KN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A13L       TCGA-DJ-A13M       TCGA-DJ-A13O       TCGA-DJ-A13P 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A13R       TCGA-DJ-A13S       TCGA-DJ-A13T       TCGA-DJ-A13U 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A13V       TCGA-DJ-A13W       TCGA-DJ-A13X       TCGA-DJ-A1QD 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A1QE       TCGA-DJ-A1QF       TCGA-DJ-A1QG       TCGA-DJ-A1QH 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A1QI       TCGA-DJ-A1QL       TCGA-DJ-A1QM       TCGA-DJ-A1QN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A1QO       TCGA-DJ-A1QQ       TCGA-DJ-A2PN       TCGA-DJ-A2PO 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2PP       TCGA-DJ-A2PQ       TCGA-DJ-A2PR       TCGA-DJ-A2PS 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2PT       TCGA-DJ-A2PU       TCGA-DJ-A2PV       TCGA-DJ-A2PW 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2PX       TCGA-DJ-A2PY       TCGA-DJ-A2PZ       TCGA-DJ-A2Q0 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2Q1       TCGA-DJ-A2Q2       TCGA-DJ-A2Q3       TCGA-DJ-A2Q4 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2Q5       TCGA-DJ-A2Q6       TCGA-DJ-A2Q7       TCGA-DJ-A2Q8 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2Q9       TCGA-DJ-A2QA       TCGA-DJ-A2QB       TCGA-DJ-A2QC 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A3UK       TCGA-DJ-A3UM       TCGA-DJ-A3UN       TCGA-DJ-A3UO 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A3UP       TCGA-DJ-A3UQ       TCGA-DJ-A3UR       TCGA-DJ-A3US 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A3UT       TCGA-DJ-A3UU       TCGA-DJ-A3UV       TCGA-DJ-A3UX 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A3UY       TCGA-DO-A1JZ       TCGA-DO-A1K0       TCGA-DO-A2HM 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-E3-A3DY       TCGA-E3-A3DZ       TCGA-E3-A3E0       TCGA-E3-A3E1 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-E3-A3E2       TCGA-E3-A3E3       TCGA-E3-A3E5       TCGA-E8-A242 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-E8-A2EA       TCGA-EL-A3CL       TCGA-EL-A3CM       TCGA-EL-A3CN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3CO       TCGA-EL-A3CP       TCGA-EL-A3CR       TCGA-EL-A3CS 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3CT       TCGA-EL-A3CU       TCGA-EL-A3CV       TCGA-EL-A3CW 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3CX       TCGA-EL-A3CY       TCGA-EL-A3CZ       TCGA-EL-A3D0 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3D1       TCGA-EL-A3D4       TCGA-EL-A3D5       TCGA-EL-A3D6 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3GO       TCGA-EL-A3GP       TCGA-EL-A3GQ       TCGA-EL-A3GR 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3GS       TCGA-EL-A3GU       TCGA-EL-A3GV       TCGA-EL-A3GW 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3GX       TCGA-EL-A3GY       TCGA-EL-A3GZ       TCGA-EL-A3H1 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3H2       TCGA-EL-A3H3       TCGA-EL-A3H4       TCGA-EL-A3H5 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3H7       TCGA-EL-A3H8       TCGA-EL-A3MW       TCGA-EL-A3MX 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3MY       TCGA-EL-A3MZ       TCGA-EL-A3N2       TCGA-EL-A3N3 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3T0       TCGA-EL-A3T1       TCGA-EL-A3T2       TCGA-EL-A3T3 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3T6       TCGA-EL-A3T8       TCGA-EL-A3T9       TCGA-EL-A3TA 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3TB       TCGA-EM-A1CS       TCGA-EM-A1CT       TCGA-EM-A1CU 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A1CV       TCGA-EM-A1CW       TCGA-EM-A1YA       TCGA-EM-A1YB 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A1YC       TCGA-EM-A1YD       TCGA-EM-A1YE       TCGA-EM-A22I 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A22J       TCGA-EM-A22K       TCGA-EM-A22L       TCGA-EM-A22M 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A22N       TCGA-EM-A22O       TCGA-EM-A22P       TCGA-EM-A22Q 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A2CJ       TCGA-EM-A2CK       TCGA-EM-A2CL       TCGA-EM-A2CM 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A2CN       TCGA-EM-A2CO       TCGA-EM-A2CP       TCGA-EM-A2CQ 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A2CT       TCGA-EM-A2CU       TCGA-EM-A2OV       TCGA-EM-A2OW 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A2OX       TCGA-EM-A2OY       TCGA-EM-A2P0       TCGA-EM-A2P1 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A2P2       TCGA-EM-A2P3       TCGA-EM-A3AI       TCGA-EM-A3AJ 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A3AK       TCGA-EM-A3AL       TCGA-EM-A3AN       TCGA-EM-A3AO 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A3AP       TCGA-EM-A3AQ       TCGA-EM-A3AR       TCGA-EM-A3FJ 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A3FK       TCGA-EM-A3FL       TCGA-EM-A3FM       TCGA-EM-A3FN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A3FO       TCGA-EM-A3FP       TCGA-EM-A3FQ       TCGA-EM-A3O3 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A3O6       TCGA-EM-A3O7       TCGA-EM-A3O8       TCGA-EM-A3O9 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A3OA       TCGA-EM-A3OB       TCGA-ET-A25G       TCGA-ET-A25I 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A25J       TCGA-ET-A25K       TCGA-ET-A25O       TCGA-ET-A25R 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A2MY       TCGA-ET-A2MZ       TCGA-ET-A2N0       TCGA-ET-A2N1 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A2N4       TCGA-ET-A2N5       TCGA-ET-A39I       TCGA-ET-A39J 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A39K       TCGA-ET-A39L       TCGA-ET-A39M       TCGA-ET-A39N 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A39O       TCGA-ET-A39P       TCGA-ET-A39R       TCGA-ET-A39S 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A39T       TCGA-ET-A3BN       TCGA-ET-A3BO       TCGA-ET-A3BP 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A3BQ       TCGA-ET-A3BS       TCGA-ET-A3BT       TCGA-ET-A3BU 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A3BV       TCGA-ET-A3BW       TCGA-ET-A3BX       TCGA-ET-A3DO 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A3DP       TCGA-ET-A3DQ       TCGA-ET-A3DR       TCGA-ET-A3DS 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A3DT       TCGA-ET-A3DU       TCGA-ET-A3DV       TCGA-ET-A3DW 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FE-A22Z       TCGA-FE-A230       TCGA-FE-A231       TCGA-FE-A232 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FE-A233       TCGA-FE-A234       TCGA-FE-A235       TCGA-FE-A236 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FE-A237       TCGA-FE-A23A       TCGA-FE-A3PB       TCGA-FE-A3PC 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FE-A3PD       TCGA-FK-A3S3       TCGA-FK-A3SB       TCGA-FK-A3SD 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FK-A3SE       TCGA-FK-A3SG       TCGA-FK-A3SH       TCGA-FY-A2QD 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FY-A3BL       TCGA-FY-A3I4       TCGA-FY-A3I5       TCGA-FY-A3NM 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FY-A3NN       TCGA-FY-A3R6       TCGA-FY-A3R7       TCGA-FY-A3R8 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FY-A3R9       TCGA-FY-A3RA       TCGA-FY-A3W9       TCGA-FY-A3WA 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-GE-A2C6       TCGA-H2-A26U       TCGA-H2-A2K9       TCGA-H2-A3RH 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-H2-A3RI       TCGA-IM-A3EB       TCGA-IM-A3ED       TCGA-IM-A3U2 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-IM-A3U3       TCGA-J8-A3NZ       TCGA-J8-A3O0       TCGA-J8-A3O1 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
D29V2, multiclass
        clus
vv       SCUBE2 MUTATED SCUBE2 WILD-TYPE
  CLUS_1              0              105
  CLUS_2              1               43
  CLUS_3              2              172
D29V3, multiclass
[1] "Remove cluster labels:" "SCUBE2 MUTATED"        
clus
  SCUBE2 MUTATED SCUBE2 WILD-TYPE 
               1              216 
      TCGA-BJ-A0YZ       TCGA-BJ-A0Z0       TCGA-BJ-A0Z2       TCGA-BJ-A0Z3 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A0Z5       TCGA-BJ-A0Z9       TCGA-BJ-A0ZA       TCGA-BJ-A0ZB 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A0ZC       TCGA-BJ-A0ZE       TCGA-BJ-A0ZF       TCGA-BJ-A0ZG 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A0ZJ       TCGA-BJ-A18Y       TCGA-BJ-A18Z       TCGA-BJ-A190 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A191       TCGA-BJ-A192       TCGA-BJ-A28R       TCGA-BJ-A28S 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A28T       TCGA-BJ-A28V       TCGA-BJ-A28Z       TCGA-BJ-A290 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A2N7       TCGA-BJ-A2N9       TCGA-BJ-A2NA       TCGA-BJ-A2P4 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A3EZ       TCGA-BJ-A3F0       TCGA-CE-A13K       TCGA-CE-A27D 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-CE-A3MD       TCGA-CE-A3ME       TCGA-DE-A0Y2       TCGA-DE-A2OL 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DE-A3KN       TCGA-DJ-A13M       TCGA-DJ-A13O       TCGA-DJ-A13R 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A13S       TCGA-DJ-A13V       TCGA-DJ-A13W       TCGA-DJ-A13X 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A1QD       TCGA-DJ-A1QE       TCGA-DJ-A1QF       TCGA-DJ-A1QG 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A1QI       TCGA-DJ-A1QL       TCGA-DJ-A1QM       TCGA-DJ-A1QN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A1QO       TCGA-DJ-A2PN       TCGA-DJ-A2PO       TCGA-DJ-A2PP 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2PQ       TCGA-DJ-A2PR       TCGA-DJ-A2PS       TCGA-DJ-A2PU 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2PV       TCGA-DJ-A2PW       TCGA-DJ-A2PY       TCGA-DJ-A2PZ 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2Q0       TCGA-DJ-A2Q1       TCGA-DJ-A2Q2       TCGA-DJ-A2Q4 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2Q5       TCGA-DJ-A2Q6       TCGA-DJ-A2Q7       TCGA-DJ-A2Q8 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2Q9       TCGA-DJ-A2QA       TCGA-DJ-A2QB       TCGA-DJ-A2QC 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DO-A1JZ       TCGA-DO-A1K0       TCGA-E3-A3DY       TCGA-E3-A3DZ 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-E3-A3E0       TCGA-E3-A3E1       TCGA-E3-A3E3       TCGA-E3-A3E5 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-E8-A2EA       TCGA-EL-A3CL       TCGA-EL-A3CM       TCGA-EL-A3CN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3CO       TCGA-EL-A3CP       TCGA-EL-A3CR       TCGA-EL-A3CS 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3CT       TCGA-EL-A3CU       TCGA-EL-A3CV       TCGA-EL-A3CW 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3CX       TCGA-EL-A3CY       TCGA-EL-A3CZ       TCGA-EL-A3D0 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3D1       TCGA-EL-A3D4       TCGA-EL-A3D5       TCGA-EL-A3D6 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3GO       TCGA-EL-A3GP       TCGA-EL-A3GQ       TCGA-EL-A3GR 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3GS       TCGA-EL-A3GU       TCGA-EL-A3GV       TCGA-EL-A3GW 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3GX       TCGA-EL-A3GY       TCGA-EL-A3GZ       TCGA-EL-A3H1 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3H2       TCGA-EL-A3H3       TCGA-EL-A3H4       TCGA-EL-A3H5 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3H7       TCGA-EL-A3H8       TCGA-EL-A3MW       TCGA-EL-A3MX 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3MY       TCGA-EL-A3MZ       TCGA-EL-A3N2       TCGA-EL-A3N3 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A1CT       TCGA-EM-A1CU       TCGA-EM-A1CV       TCGA-EM-A1CW 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A1YA       TCGA-EM-A1YB       TCGA-EM-A1YC       TCGA-EM-A1YD 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A1YE       TCGA-EM-A22I       TCGA-EM-A22J       TCGA-EM-A22L 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A22M       TCGA-EM-A22O       TCGA-EM-A22Q       TCGA-EM-A2CJ 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A2CK       TCGA-EM-A2CL       TCGA-EM-A2CM       TCGA-EM-A2CN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A2CO       TCGA-EM-A2CP       TCGA-EM-A2CQ       TCGA-EM-A2CR 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A2CU       TCGA-EM-A2OV       TCGA-EM-A2OY       TCGA-EM-A2P1 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A3AI       TCGA-EM-A3AJ       TCGA-EM-A3AL       TCGA-EM-A3AN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A3AO       TCGA-EM-A3AP       TCGA-EM-A3FJ       TCGA-EM-A3FL 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A3FN       TCGA-EM-A3FO       TCGA-EM-A3FP       TCGA-ET-A25G 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A25O       TCGA-ET-A2MY       TCGA-ET-A2MZ       TCGA-ET-A2N0 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A2N1       TCGA-ET-A2N4       TCGA-ET-A2N5       TCGA-ET-A39I 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A39J       TCGA-ET-A39L       TCGA-ET-A39M       TCGA-ET-A39N 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A39P       TCGA-ET-A39R       TCGA-ET-A39T       TCGA-ET-A3BN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A3BP       TCGA-ET-A3BS       TCGA-ET-A3BT       TCGA-ET-A3BU 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A3BV       TCGA-ET-A3BW       TCGA-ET-A3BX       TCGA-ET-A3DO 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A3DP       TCGA-ET-A3DS       TCGA-ET-A3DT       TCGA-ET-A3DV 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A3DW       TCGA-FE-A22Z       TCGA-FE-A230       TCGA-FE-A231 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FE-A232       TCGA-FE-A233       TCGA-FE-A234       TCGA-FE-A235 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FE-A236       TCGA-FE-A237       TCGA-FE-A23A       TCGA-FY-A2QD 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FY-A3BL       TCGA-GE-A2C6       TCGA-H2-A2K9       TCGA-IM-A3EB 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-IM-A3ED       TCGA-J8-A3NZ       TCGA-J8-A3O0       TCGA-J8-A3O1 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
D29V4, multiclass
[1] "Remove cluster labels:" "SCUBE2 MUTATED"        
clus
  SCUBE2 MUTATED SCUBE2 WILD-TYPE 
               1              216 
      TCGA-BJ-A0YZ       TCGA-BJ-A0Z0       TCGA-BJ-A0Z2       TCGA-BJ-A0Z3 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A0Z5       TCGA-BJ-A0Z9       TCGA-BJ-A0ZA       TCGA-BJ-A0ZB 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A0ZC       TCGA-BJ-A0ZE       TCGA-BJ-A0ZF       TCGA-BJ-A0ZG 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A0ZJ       TCGA-BJ-A18Y       TCGA-BJ-A18Z       TCGA-BJ-A190 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A191       TCGA-BJ-A192       TCGA-BJ-A28R       TCGA-BJ-A28S 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A28T       TCGA-BJ-A28V       TCGA-BJ-A28Z       TCGA-BJ-A290 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A2N7       TCGA-BJ-A2N9       TCGA-BJ-A2NA       TCGA-BJ-A2P4 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-BJ-A3EZ       TCGA-BJ-A3F0       TCGA-CE-A13K       TCGA-CE-A27D 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-CE-A3MD       TCGA-CE-A3ME       TCGA-DE-A0Y2       TCGA-DE-A2OL 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DE-A3KN       TCGA-DJ-A13M       TCGA-DJ-A13O       TCGA-DJ-A13R 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A13S       TCGA-DJ-A13V       TCGA-DJ-A13W       TCGA-DJ-A13X 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A1QD       TCGA-DJ-A1QE       TCGA-DJ-A1QF       TCGA-DJ-A1QG 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A1QI       TCGA-DJ-A1QL       TCGA-DJ-A1QM       TCGA-DJ-A1QN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A1QO       TCGA-DJ-A2PN       TCGA-DJ-A2PO       TCGA-DJ-A2PP 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2PQ       TCGA-DJ-A2PR       TCGA-DJ-A2PS       TCGA-DJ-A2PU 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2PV       TCGA-DJ-A2PW       TCGA-DJ-A2PY       TCGA-DJ-A2PZ 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2Q0       TCGA-DJ-A2Q1       TCGA-DJ-A2Q2       TCGA-DJ-A2Q4 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2Q5       TCGA-DJ-A2Q6       TCGA-DJ-A2Q7       TCGA-DJ-A2Q8 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DJ-A2Q9       TCGA-DJ-A2QA       TCGA-DJ-A2QB       TCGA-DJ-A2QC 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-DO-A1JZ       TCGA-DO-A1K0       TCGA-E3-A3DY       TCGA-E3-A3DZ 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-E3-A3E0       TCGA-E3-A3E1       TCGA-E3-A3E3       TCGA-E3-A3E5 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-E8-A2EA       TCGA-EL-A3CL       TCGA-EL-A3CM       TCGA-EL-A3CN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3CO       TCGA-EL-A3CP       TCGA-EL-A3CR       TCGA-EL-A3CS 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3CT       TCGA-EL-A3CU       TCGA-EL-A3CV       TCGA-EL-A3CW 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3CX       TCGA-EL-A3CY       TCGA-EL-A3CZ       TCGA-EL-A3D0 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3D1       TCGA-EL-A3D4       TCGA-EL-A3D5       TCGA-EL-A3D6 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3GO       TCGA-EL-A3GP       TCGA-EL-A3GQ       TCGA-EL-A3GR 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3GS       TCGA-EL-A3GU       TCGA-EL-A3GV       TCGA-EL-A3GW 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3GX       TCGA-EL-A3GY       TCGA-EL-A3GZ       TCGA-EL-A3H1 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3H2       TCGA-EL-A3H3       TCGA-EL-A3H4       TCGA-EL-A3H5 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3H7       TCGA-EL-A3H8       TCGA-EL-A3MW       TCGA-EL-A3MX 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EL-A3MY       TCGA-EL-A3MZ       TCGA-EL-A3N2       TCGA-EL-A3N3 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A1CT       TCGA-EM-A1CU       TCGA-EM-A1CV       TCGA-EM-A1CW 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A1YA       TCGA-EM-A1YB       TCGA-EM-A1YC       TCGA-EM-A1YD 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A1YE       TCGA-EM-A22I       TCGA-EM-A22J       TCGA-EM-A22L 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A22M       TCGA-EM-A22O       TCGA-EM-A22Q       TCGA-EM-A2CJ 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A2CK       TCGA-EM-A2CL       TCGA-EM-A2CM       TCGA-EM-A2CN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A2CO       TCGA-EM-A2CP       TCGA-EM-A2CQ       TCGA-EM-A2CR 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A2CU       TCGA-EM-A2OV       TCGA-EM-A2OY       TCGA-EM-A2P1 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A3AI       TCGA-EM-A3AJ       TCGA-EM-A3AL       TCGA-EM-A3AN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A3AO       TCGA-EM-A3AP       TCGA-EM-A3FJ       TCGA-EM-A3FL 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-EM-A3FN       TCGA-EM-A3FO       TCGA-EM-A3FP       TCGA-ET-A25G 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A25O       TCGA-ET-A2MY       TCGA-ET-A2MZ       TCGA-ET-A2N0 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A2N1       TCGA-ET-A2N4       TCGA-ET-A2N5       TCGA-ET-A39I 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A39J       TCGA-ET-A39L       TCGA-ET-A39M       TCGA-ET-A39N 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A39P       TCGA-ET-A39R       TCGA-ET-A39T       TCGA-ET-A3BN 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A3BP       TCGA-ET-A3BS       TCGA-ET-A3BT       TCGA-ET-A3BU 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A3BV       TCGA-ET-A3BW       TCGA-ET-A3BX       TCGA-ET-A3DO 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A3DP       TCGA-ET-A3DS       TCGA-ET-A3DT       TCGA-ET-A3DV 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-ET-A3DW       TCGA-FE-A22Z       TCGA-FE-A230       TCGA-FE-A231 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FE-A232       TCGA-FE-A233       TCGA-FE-A234       TCGA-FE-A235 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FE-A236       TCGA-FE-A237       TCGA-FE-A23A       TCGA-FY-A2QD 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-FY-A3BL       TCGA-GE-A2C6       TCGA-H2-A2K9       TCGA-IM-A3EB 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
      TCGA-IM-A3ED       TCGA-J8-A3NZ       TCGA-J8-A3O0       TCGA-J8-A3O1 
"SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" "SCUBE2 WILD-TYPE" 
D29V5, multiclass
        clus
vv       SCUBE2 MUTATED SCUBE2 WILD-TYPE
  CLUS_1              0              102
  CLUS_2              1               35
  CLUS_3              1               69
  CLUS_4              1               94
D29V6, multiclass
        clus
vv       SCUBE2 MUTATED SCUBE2 WILD-TYPE
  CLUS_1              0              110
  CLUS_2              3              133
  CLUS_3              0               57
D29V7, multiclass
        clus
vv       SCUBE2 MUTATED SCUBE2 WILD-TYPE
  CLUS_1              0              105
  CLUS_2              2              114
  CLUS_3              1              100
D29V8, multiclass
        clus
vv       SCUBE2 MUTATED SCUBE2 WILD-TYPE
  CLUS_1              0               97
  CLUS_2              1              121
  CLUS_3              2              101

Clustering(30) Variable = ZNF479 MUTATION ANALYSIS
D30V1, multiclass
        clus
vv       ZNF479 MUTATED ZNF479 WILD-TYPE
  CLUS_1              0               26
  CLUS_2              3              241
  CLUS_3              0               48
D30V2, multiclass
        clus
vv       ZNF479 MUTATED ZNF479 WILD-TYPE
  CLUS_1              1              104
  CLUS_2              1               43
  CLUS_3              1              173
D30V3, multiclass
[1] "Remove cluster labels:" "ZNF479 MUTATED"        
clus
  ZNF479 MUTATED ZNF479 WILD-TYPE 
               2              215 
      TCGA-BJ-A0YZ       TCGA-BJ-A0Z0       TCGA-BJ-A0Z2       TCGA-BJ-A0Z3 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A0Z5       TCGA-BJ-A0Z9       TCGA-BJ-A0ZA       TCGA-BJ-A0ZB 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A0ZC       TCGA-BJ-A0ZE       TCGA-BJ-A0ZF       TCGA-BJ-A0ZG 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A0ZJ       TCGA-BJ-A18Y       TCGA-BJ-A18Z       TCGA-BJ-A190 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A191       TCGA-BJ-A192       TCGA-BJ-A28R       TCGA-BJ-A28S 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A28T       TCGA-BJ-A28V       TCGA-BJ-A28Z       TCGA-BJ-A290 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A2N7       TCGA-BJ-A2N9       TCGA-BJ-A2NA       TCGA-BJ-A2P4 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A3EZ       TCGA-BJ-A3F0       TCGA-CE-A13K       TCGA-CE-A27D 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-CE-A3MD       TCGA-CE-A3ME       TCGA-DE-A0Y2       TCGA-DE-A2OL 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DE-A3KN       TCGA-DJ-A13M       TCGA-DJ-A13O       TCGA-DJ-A13R 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A13S       TCGA-DJ-A13V       TCGA-DJ-A13W       TCGA-DJ-A13X 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A1QD       TCGA-DJ-A1QE       TCGA-DJ-A1QF       TCGA-DJ-A1QG 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A1QI       TCGA-DJ-A1QL       TCGA-DJ-A1QM       TCGA-DJ-A1QN 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A1QO       TCGA-DJ-A2PN       TCGA-DJ-A2PO       TCGA-DJ-A2PP 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A2PQ       TCGA-DJ-A2PR       TCGA-DJ-A2PS       TCGA-DJ-A2PU 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A2PV       TCGA-DJ-A2PW       TCGA-DJ-A2PY       TCGA-DJ-A2PZ 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A2Q0       TCGA-DJ-A2Q1       TCGA-DJ-A2Q2       TCGA-DJ-A2Q4 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A2Q5       TCGA-DJ-A2Q6       TCGA-DJ-A2Q7       TCGA-DJ-A2Q8 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A2Q9       TCGA-DJ-A2QA       TCGA-DJ-A2QB       TCGA-DJ-A2QC 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DO-A1JZ       TCGA-DO-A1K0       TCGA-E3-A3DY       TCGA-E3-A3DZ 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-E3-A3E0       TCGA-E3-A3E1       TCGA-E3-A3E3       TCGA-E3-A3E5 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-E8-A2EA       TCGA-EL-A3CL       TCGA-EL-A3CM       TCGA-EL-A3CN 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3CO       TCGA-EL-A3CP       TCGA-EL-A3CR       TCGA-EL-A3CS 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3CT       TCGA-EL-A3CU       TCGA-EL-A3CV       TCGA-EL-A3CW 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3CX       TCGA-EL-A3CY       TCGA-EL-A3CZ       TCGA-EL-A3D0 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3D1       TCGA-EL-A3D4       TCGA-EL-A3D5       TCGA-EL-A3D6 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3GO       TCGA-EL-A3GP       TCGA-EL-A3GQ       TCGA-EL-A3GR 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3GS       TCGA-EL-A3GU       TCGA-EL-A3GV       TCGA-EL-A3GW 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3GX       TCGA-EL-A3GY       TCGA-EL-A3GZ       TCGA-EL-A3H1 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3H2       TCGA-EL-A3H3       TCGA-EL-A3H4       TCGA-EL-A3H5 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3H7       TCGA-EL-A3H8       TCGA-EL-A3MW       TCGA-EL-A3MX 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3MY       TCGA-EL-A3MZ       TCGA-EL-A3N2       TCGA-EM-A1CT 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A1CU       TCGA-EM-A1CV       TCGA-EM-A1CW       TCGA-EM-A1YA 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A1YB       TCGA-EM-A1YC       TCGA-EM-A1YD       TCGA-EM-A1YE 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A22I       TCGA-EM-A22J       TCGA-EM-A22L       TCGA-EM-A22M 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A22O       TCGA-EM-A22Q       TCGA-EM-A2CJ       TCGA-EM-A2CK 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A2CL       TCGA-EM-A2CM       TCGA-EM-A2CN       TCGA-EM-A2CO 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A2CP       TCGA-EM-A2CQ       TCGA-EM-A2CR       TCGA-EM-A2CU 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A2OV       TCGA-EM-A2OY       TCGA-EM-A2P1       TCGA-EM-A3AI 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A3AJ       TCGA-EM-A3AL       TCGA-EM-A3AN       TCGA-EM-A3AO 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A3AP       TCGA-EM-A3FJ       TCGA-EM-A3FL       TCGA-EM-A3FN 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A3FO       TCGA-ET-A25G       TCGA-ET-A25O       TCGA-ET-A2MY 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A2MZ       TCGA-ET-A2N0       TCGA-ET-A2N1       TCGA-ET-A2N4 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A2N5       TCGA-ET-A39I       TCGA-ET-A39J       TCGA-ET-A39L 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A39M       TCGA-ET-A39N       TCGA-ET-A39P       TCGA-ET-A39R 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A39T       TCGA-ET-A3BN       TCGA-ET-A3BP       TCGA-ET-A3BS 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A3BT       TCGA-ET-A3BU       TCGA-ET-A3BV       TCGA-ET-A3BW 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A3BX       TCGA-ET-A3DO       TCGA-ET-A3DP       TCGA-ET-A3DS 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A3DT       TCGA-ET-A3DV       TCGA-ET-A3DW       TCGA-FE-A22Z 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FE-A230       TCGA-FE-A231       TCGA-FE-A232       TCGA-FE-A233 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FE-A234       TCGA-FE-A235       TCGA-FE-A236       TCGA-FE-A237 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FE-A23A       TCGA-FY-A2QD       TCGA-FY-A3BL       TCGA-FY-A3ON 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-GE-A2C6       TCGA-H2-A2K9       TCGA-IM-A3EB       TCGA-IM-A3ED 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-J8-A3NZ       TCGA-J8-A3O0       TCGA-J8-A3O1 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
D30V4, multiclass
[1] "Remove cluster labels:" "ZNF479 MUTATED"        
clus
  ZNF479 MUTATED ZNF479 WILD-TYPE 
               2              215 
      TCGA-BJ-A0YZ       TCGA-BJ-A0Z0       TCGA-BJ-A0Z2       TCGA-BJ-A0Z3 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A0Z5       TCGA-BJ-A0Z9       TCGA-BJ-A0ZA       TCGA-BJ-A0ZB 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A0ZC       TCGA-BJ-A0ZE       TCGA-BJ-A0ZF       TCGA-BJ-A0ZG 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A0ZJ       TCGA-BJ-A18Y       TCGA-BJ-A18Z       TCGA-BJ-A190 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A191       TCGA-BJ-A192       TCGA-BJ-A28R       TCGA-BJ-A28S 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A28T       TCGA-BJ-A28V       TCGA-BJ-A28Z       TCGA-BJ-A290 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A2N7       TCGA-BJ-A2N9       TCGA-BJ-A2NA       TCGA-BJ-A2P4 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-BJ-A3EZ       TCGA-BJ-A3F0       TCGA-CE-A13K       TCGA-CE-A27D 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-CE-A3MD       TCGA-CE-A3ME       TCGA-DE-A0Y2       TCGA-DE-A2OL 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DE-A3KN       TCGA-DJ-A13M       TCGA-DJ-A13O       TCGA-DJ-A13R 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A13S       TCGA-DJ-A13V       TCGA-DJ-A13W       TCGA-DJ-A13X 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A1QD       TCGA-DJ-A1QE       TCGA-DJ-A1QF       TCGA-DJ-A1QG 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A1QI       TCGA-DJ-A1QL       TCGA-DJ-A1QM       TCGA-DJ-A1QN 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A1QO       TCGA-DJ-A2PN       TCGA-DJ-A2PO       TCGA-DJ-A2PP 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A2PQ       TCGA-DJ-A2PR       TCGA-DJ-A2PS       TCGA-DJ-A2PU 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A2PV       TCGA-DJ-A2PW       TCGA-DJ-A2PY       TCGA-DJ-A2PZ 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A2Q0       TCGA-DJ-A2Q1       TCGA-DJ-A2Q2       TCGA-DJ-A2Q4 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A2Q5       TCGA-DJ-A2Q6       TCGA-DJ-A2Q7       TCGA-DJ-A2Q8 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DJ-A2Q9       TCGA-DJ-A2QA       TCGA-DJ-A2QB       TCGA-DJ-A2QC 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DO-A1JZ       TCGA-DO-A1K0       TCGA-E3-A3DY       TCGA-E3-A3DZ 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-E3-A3E0       TCGA-E3-A3E1       TCGA-E3-A3E3       TCGA-E3-A3E5 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-E8-A2EA       TCGA-EL-A3CL       TCGA-EL-A3CM       TCGA-EL-A3CN 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3CO       TCGA-EL-A3CP       TCGA-EL-A3CR       TCGA-EL-A3CS 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3CT       TCGA-EL-A3CU       TCGA-EL-A3CV       TCGA-EL-A3CW 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3CX       TCGA-EL-A3CY       TCGA-EL-A3CZ       TCGA-EL-A3D0 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3D1       TCGA-EL-A3D4       TCGA-EL-A3D5       TCGA-EL-A3D6 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3GO       TCGA-EL-A3GP       TCGA-EL-A3GQ       TCGA-EL-A3GR 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3GS       TCGA-EL-A3GU       TCGA-EL-A3GV       TCGA-EL-A3GW 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3GX       TCGA-EL-A3GY       TCGA-EL-A3GZ       TCGA-EL-A3H1 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3H2       TCGA-EL-A3H3       TCGA-EL-A3H4       TCGA-EL-A3H5 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3H7       TCGA-EL-A3H8       TCGA-EL-A3MW       TCGA-EL-A3MX 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EL-A3MY       TCGA-EL-A3MZ       TCGA-EL-A3N2       TCGA-EM-A1CT 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A1CU       TCGA-EM-A1CV       TCGA-EM-A1CW       TCGA-EM-A1YA 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A1YB       TCGA-EM-A1YC       TCGA-EM-A1YD       TCGA-EM-A1YE 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A22I       TCGA-EM-A22J       TCGA-EM-A22L       TCGA-EM-A22M 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A22O       TCGA-EM-A22Q       TCGA-EM-A2CJ       TCGA-EM-A2CK 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A2CL       TCGA-EM-A2CM       TCGA-EM-A2CN       TCGA-EM-A2CO 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A2CP       TCGA-EM-A2CQ       TCGA-EM-A2CR       TCGA-EM-A2CU 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A2OV       TCGA-EM-A2OY       TCGA-EM-A2P1       TCGA-EM-A3AI 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A3AJ       TCGA-EM-A3AL       TCGA-EM-A3AN       TCGA-EM-A3AO 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A3AP       TCGA-EM-A3FJ       TCGA-EM-A3FL       TCGA-EM-A3FN 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EM-A3FO       TCGA-ET-A25G       TCGA-ET-A25O       TCGA-ET-A2MY 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A2MZ       TCGA-ET-A2N0       TCGA-ET-A2N1       TCGA-ET-A2N4 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A2N5       TCGA-ET-A39I       TCGA-ET-A39J       TCGA-ET-A39L 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A39M       TCGA-ET-A39N       TCGA-ET-A39P       TCGA-ET-A39R 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A39T       TCGA-ET-A3BN       TCGA-ET-A3BP       TCGA-ET-A3BS 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A3BT       TCGA-ET-A3BU       TCGA-ET-A3BV       TCGA-ET-A3BW 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A3BX       TCGA-ET-A3DO       TCGA-ET-A3DP       TCGA-ET-A3DS 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ET-A3DT       TCGA-ET-A3DV       TCGA-ET-A3DW       TCGA-FE-A22Z 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FE-A230       TCGA-FE-A231       TCGA-FE-A232       TCGA-FE-A233 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FE-A234       TCGA-FE-A235       TCGA-FE-A236       TCGA-FE-A237 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FE-A23A       TCGA-FY-A2QD       TCGA-FY-A3BL       TCGA-FY-A3ON 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-GE-A2C6       TCGA-H2-A2K9       TCGA-IM-A3EB       TCGA-IM-A3ED 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-J8-A3NZ       TCGA-J8-A3O0       TCGA-J8-A3O1 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
D30V5, multiclass
        clus
vv       ZNF479 MUTATED ZNF479 WILD-TYPE
  CLUS_1              1              101
  CLUS_2              0               36
  CLUS_3              1               69
  CLUS_4              1               94
D30V6, multiclass
        clus
vv       ZNF479 MUTATED ZNF479 WILD-TYPE
  CLUS_1              1              109
  CLUS_2              1              135
  CLUS_3              1               56
D30V7, multiclass
        clus
vv       ZNF479 MUTATED ZNF479 WILD-TYPE
  CLUS_1              1              104
  CLUS_2              1              115
  CLUS_3              1              100
D30V8, multiclass
        clus
vv       ZNF479 MUTATED ZNF479 WILD-TYPE
  CLUS_1              1               96
  CLUS_2              1              121
  CLUS_3              1              102

Clustering(31) Variable = SREBF2 MUTATION ANALYSIS
D31V1, multiclass
        clus
vv       SREBF2 MUTATED SREBF2 WILD-TYPE
  CLUS_1              0               26
  CLUS_2              3              241
  CLUS_3              0               48
D31V2, multiclass
        clus
vv       SREBF2 MUTATED SREBF2 WILD-TYPE
  CLUS_1              1              104
  CLUS_2              1               43
  CLUS_3              1              173
D31V3, multiclass
[1] "Remove cluster labels:" "SREBF2 MUTATED"        
clus
  SREBF2 MUTATED SREBF2 WILD-TYPE 
               2              215 
      TCGA-BJ-A0YZ       TCGA-BJ-A0Z0       TCGA-BJ-A0Z2       TCGA-BJ-A0Z3 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A0Z5       TCGA-BJ-A0Z9       TCGA-BJ-A0ZA       TCGA-BJ-A0ZB 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A0ZC       TCGA-BJ-A0ZE       TCGA-BJ-A0ZF       TCGA-BJ-A0ZG 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A0ZJ       TCGA-BJ-A18Y       TCGA-BJ-A18Z       TCGA-BJ-A190 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A191       TCGA-BJ-A192       TCGA-BJ-A28R       TCGA-BJ-A28S 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A28T       TCGA-BJ-A28V       TCGA-BJ-A28Z       TCGA-BJ-A290 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A2N7       TCGA-BJ-A2N9       TCGA-BJ-A2NA       TCGA-BJ-A2P4 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A3EZ       TCGA-BJ-A3F0       TCGA-CE-A13K       TCGA-CE-A27D 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-CE-A3MD       TCGA-CE-A3ME       TCGA-DE-A0Y2       TCGA-DE-A2OL 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DE-A3KN       TCGA-DJ-A13M       TCGA-DJ-A13O       TCGA-DJ-A13R 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A13S       TCGA-DJ-A13V       TCGA-DJ-A13W       TCGA-DJ-A13X 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A1QD       TCGA-DJ-A1QE       TCGA-DJ-A1QF       TCGA-DJ-A1QG 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A1QI       TCGA-DJ-A1QL       TCGA-DJ-A1QM       TCGA-DJ-A1QN 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A1QO       TCGA-DJ-A2PN       TCGA-DJ-A2PO       TCGA-DJ-A2PP 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A2PQ       TCGA-DJ-A2PR       TCGA-DJ-A2PS       TCGA-DJ-A2PU 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A2PV       TCGA-DJ-A2PW       TCGA-DJ-A2PY       TCGA-DJ-A2PZ 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A2Q0       TCGA-DJ-A2Q1       TCGA-DJ-A2Q2       TCGA-DJ-A2Q4 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A2Q5       TCGA-DJ-A2Q6       TCGA-DJ-A2Q7       TCGA-DJ-A2Q8 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A2Q9       TCGA-DJ-A2QA       TCGA-DJ-A2QB       TCGA-DJ-A2QC 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DO-A1JZ       TCGA-DO-A1K0       TCGA-E3-A3DY       TCGA-E3-A3DZ 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-E3-A3E0       TCGA-E3-A3E1       TCGA-E3-A3E3       TCGA-E3-A3E5 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-E8-A2EA       TCGA-EL-A3CL       TCGA-EL-A3CM       TCGA-EL-A3CN 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3CO       TCGA-EL-A3CP       TCGA-EL-A3CR       TCGA-EL-A3CS 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3CT       TCGA-EL-A3CU       TCGA-EL-A3CV       TCGA-EL-A3CW 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3CX       TCGA-EL-A3CZ       TCGA-EL-A3D0       TCGA-EL-A3D1 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3D4       TCGA-EL-A3D5       TCGA-EL-A3D6       TCGA-EL-A3GO 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3GP       TCGA-EL-A3GQ       TCGA-EL-A3GR       TCGA-EL-A3GS 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3GU       TCGA-EL-A3GV       TCGA-EL-A3GW       TCGA-EL-A3GX 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3GY       TCGA-EL-A3GZ       TCGA-EL-A3H1       TCGA-EL-A3H2 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3H3       TCGA-EL-A3H4       TCGA-EL-A3H5       TCGA-EL-A3H7 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3H8       TCGA-EL-A3MW       TCGA-EL-A3MX       TCGA-EL-A3MY 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3MZ       TCGA-EL-A3N2       TCGA-EL-A3N3       TCGA-EM-A1CT 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A1CU       TCGA-EM-A1CV       TCGA-EM-A1CW       TCGA-EM-A1YA 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A1YB       TCGA-EM-A1YC       TCGA-EM-A1YD       TCGA-EM-A1YE 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A22I       TCGA-EM-A22J       TCGA-EM-A22L       TCGA-EM-A22M 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A22O       TCGA-EM-A22Q       TCGA-EM-A2CJ       TCGA-EM-A2CK 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A2CL       TCGA-EM-A2CM       TCGA-EM-A2CN       TCGA-EM-A2CO 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A2CP       TCGA-EM-A2CQ       TCGA-EM-A2CR       TCGA-EM-A2CU 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A2OV       TCGA-EM-A2OY       TCGA-EM-A2P1       TCGA-EM-A3AI 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A3AJ       TCGA-EM-A3AL       TCGA-EM-A3AN       TCGA-EM-A3AO 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A3AP       TCGA-EM-A3FJ       TCGA-EM-A3FL       TCGA-EM-A3FN 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A3FO       TCGA-EM-A3FP       TCGA-ET-A25G       TCGA-ET-A25O 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A2MY       TCGA-ET-A2MZ       TCGA-ET-A2N0       TCGA-ET-A2N1 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A2N4       TCGA-ET-A2N5       TCGA-ET-A39I       TCGA-ET-A39J 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A39L       TCGA-ET-A39M       TCGA-ET-A39N       TCGA-ET-A39P 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A39R       TCGA-ET-A39T       TCGA-ET-A3BN       TCGA-ET-A3BP 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A3BS       TCGA-ET-A3BT       TCGA-ET-A3BU       TCGA-ET-A3BV 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A3BW       TCGA-ET-A3BX       TCGA-ET-A3DO       TCGA-ET-A3DP 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A3DS       TCGA-ET-A3DT       TCGA-ET-A3DV       TCGA-ET-A3DW 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-FE-A22Z       TCGA-FE-A230       TCGA-FE-A231       TCGA-FE-A232 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-FE-A234       TCGA-FE-A235       TCGA-FE-A236       TCGA-FE-A237 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-FE-A23A       TCGA-FY-A2QD       TCGA-FY-A3BL       TCGA-FY-A3ON 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-GE-A2C6       TCGA-H2-A2K9       TCGA-IM-A3EB       TCGA-IM-A3ED 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-J8-A3NZ       TCGA-J8-A3O0       TCGA-J8-A3O1 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
D31V4, multiclass
[1] "Remove cluster labels:" "SREBF2 MUTATED"        
clus
  SREBF2 MUTATED SREBF2 WILD-TYPE 
               2              215 
      TCGA-BJ-A0YZ       TCGA-BJ-A0Z0       TCGA-BJ-A0Z2       TCGA-BJ-A0Z3 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A0Z5       TCGA-BJ-A0Z9       TCGA-BJ-A0ZA       TCGA-BJ-A0ZB 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A0ZC       TCGA-BJ-A0ZE       TCGA-BJ-A0ZF       TCGA-BJ-A0ZG 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A0ZJ       TCGA-BJ-A18Y       TCGA-BJ-A18Z       TCGA-BJ-A190 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A191       TCGA-BJ-A192       TCGA-BJ-A28R       TCGA-BJ-A28S 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A28T       TCGA-BJ-A28V       TCGA-BJ-A28Z       TCGA-BJ-A290 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A2N7       TCGA-BJ-A2N9       TCGA-BJ-A2NA       TCGA-BJ-A2P4 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-BJ-A3EZ       TCGA-BJ-A3F0       TCGA-CE-A13K       TCGA-CE-A27D 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-CE-A3MD       TCGA-CE-A3ME       TCGA-DE-A0Y2       TCGA-DE-A2OL 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DE-A3KN       TCGA-DJ-A13M       TCGA-DJ-A13O       TCGA-DJ-A13R 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A13S       TCGA-DJ-A13V       TCGA-DJ-A13W       TCGA-DJ-A13X 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A1QD       TCGA-DJ-A1QE       TCGA-DJ-A1QF       TCGA-DJ-A1QG 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A1QI       TCGA-DJ-A1QL       TCGA-DJ-A1QM       TCGA-DJ-A1QN 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A1QO       TCGA-DJ-A2PN       TCGA-DJ-A2PO       TCGA-DJ-A2PP 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A2PQ       TCGA-DJ-A2PR       TCGA-DJ-A2PS       TCGA-DJ-A2PU 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A2PV       TCGA-DJ-A2PW       TCGA-DJ-A2PY       TCGA-DJ-A2PZ 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A2Q0       TCGA-DJ-A2Q1       TCGA-DJ-A2Q2       TCGA-DJ-A2Q4 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A2Q5       TCGA-DJ-A2Q6       TCGA-DJ-A2Q7       TCGA-DJ-A2Q8 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DJ-A2Q9       TCGA-DJ-A2QA       TCGA-DJ-A2QB       TCGA-DJ-A2QC 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-DO-A1JZ       TCGA-DO-A1K0       TCGA-E3-A3DY       TCGA-E3-A3DZ 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-E3-A3E0       TCGA-E3-A3E1       TCGA-E3-A3E3       TCGA-E3-A3E5 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-E8-A2EA       TCGA-EL-A3CL       TCGA-EL-A3CM       TCGA-EL-A3CN 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3CO       TCGA-EL-A3CP       TCGA-EL-A3CR       TCGA-EL-A3CS 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3CT       TCGA-EL-A3CU       TCGA-EL-A3CV       TCGA-EL-A3CW 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3CX       TCGA-EL-A3CZ       TCGA-EL-A3D0       TCGA-EL-A3D1 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3D4       TCGA-EL-A3D5       TCGA-EL-A3D6       TCGA-EL-A3GO 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3GP       TCGA-EL-A3GQ       TCGA-EL-A3GR       TCGA-EL-A3GS 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3GU       TCGA-EL-A3GV       TCGA-EL-A3GW       TCGA-EL-A3GX 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3GY       TCGA-EL-A3GZ       TCGA-EL-A3H1       TCGA-EL-A3H2 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3H3       TCGA-EL-A3H4       TCGA-EL-A3H5       TCGA-EL-A3H7 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3H8       TCGA-EL-A3MW       TCGA-EL-A3MX       TCGA-EL-A3MY 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EL-A3MZ       TCGA-EL-A3N2       TCGA-EL-A3N3       TCGA-EM-A1CT 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A1CU       TCGA-EM-A1CV       TCGA-EM-A1CW       TCGA-EM-A1YA 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A1YB       TCGA-EM-A1YC       TCGA-EM-A1YD       TCGA-EM-A1YE 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A22I       TCGA-EM-A22J       TCGA-EM-A22L       TCGA-EM-A22M 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A22O       TCGA-EM-A22Q       TCGA-EM-A2CJ       TCGA-EM-A2CK 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A2CL       TCGA-EM-A2CM       TCGA-EM-A2CN       TCGA-EM-A2CO 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A2CP       TCGA-EM-A2CQ       TCGA-EM-A2CR       TCGA-EM-A2CU 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A2OV       TCGA-EM-A2OY       TCGA-EM-A2P1       TCGA-EM-A3AI 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A3AJ       TCGA-EM-A3AL       TCGA-EM-A3AN       TCGA-EM-A3AO 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A3AP       TCGA-EM-A3FJ       TCGA-EM-A3FL       TCGA-EM-A3FN 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-EM-A3FO       TCGA-EM-A3FP       TCGA-ET-A25G       TCGA-ET-A25O 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A2MY       TCGA-ET-A2MZ       TCGA-ET-A2N0       TCGA-ET-A2N1 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A2N4       TCGA-ET-A2N5       TCGA-ET-A39I       TCGA-ET-A39J 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A39L       TCGA-ET-A39M       TCGA-ET-A39N       TCGA-ET-A39P 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A39R       TCGA-ET-A39T       TCGA-ET-A3BN       TCGA-ET-A3BP 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A3BS       TCGA-ET-A3BT       TCGA-ET-A3BU       TCGA-ET-A3BV 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A3BW       TCGA-ET-A3BX       TCGA-ET-A3DO       TCGA-ET-A3DP 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-ET-A3DS       TCGA-ET-A3DT       TCGA-ET-A3DV       TCGA-ET-A3DW 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-FE-A22Z       TCGA-FE-A230       TCGA-FE-A231       TCGA-FE-A232 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-FE-A234       TCGA-FE-A235       TCGA-FE-A236       TCGA-FE-A237 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-FE-A23A       TCGA-FY-A2QD       TCGA-FY-A3BL       TCGA-FY-A3ON 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-GE-A2C6       TCGA-H2-A2K9       TCGA-IM-A3EB       TCGA-IM-A3ED 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
      TCGA-J8-A3NZ       TCGA-J8-A3O0       TCGA-J8-A3O1 
"SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" "SREBF2 WILD-TYPE" 
D31V5, multiclass
        clus
vv       SREBF2 MUTATED SREBF2 WILD-TYPE
  CLUS_1              1              101
  CLUS_2              1               35
  CLUS_3              0               70
  CLUS_4              1               94
D31V6, multiclass
        clus
vv       SREBF2 MUTATED SREBF2 WILD-TYPE
  CLUS_1              1              109
  CLUS_2              2              134
  CLUS_3              0               57
D31V7, multiclass
        clus
vv       SREBF2 MUTATED SREBF2 WILD-TYPE
  CLUS_1              0              105
  CLUS_2              1              115
  CLUS_3              2               99
D31V8, multiclass
        clus
vv       SREBF2 MUTATED SREBF2 WILD-TYPE
  CLUS_1              0               97
  CLUS_2              2              120
  CLUS_3              1              102

Clustering(32) Variable = SLC26A11 MUTATION ANALYSIS
D32V1, multiclass
        clus
vv       SLC26A11 MUTATED SLC26A11 WILD-TYPE
  CLUS_1                0                 26
  CLUS_2                1                243
  CLUS_3                2                 46
D32V2, multiclass
        clus
vv       SLC26A11 MUTATED SLC26A11 WILD-TYPE
  CLUS_1                1                104
  CLUS_2                0                 44
  CLUS_3                2                172
D32V3, multiclass
[1] "Remove cluster labels:" "SLC26A11 MUTATED"      
clus
  SLC26A11 MUTATED SLC26A11 WILD-TYPE 
                 2                215 
        TCGA-BJ-A0YZ         TCGA-BJ-A0Z0         TCGA-BJ-A0Z2 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A0Z3         TCGA-BJ-A0Z5         TCGA-BJ-A0Z9 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A0ZA         TCGA-BJ-A0ZB         TCGA-BJ-A0ZC 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A0ZE         TCGA-BJ-A0ZF         TCGA-BJ-A0ZG 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A0ZJ         TCGA-BJ-A18Y         TCGA-BJ-A18Z 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A190         TCGA-BJ-A191         TCGA-BJ-A192 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A28R         TCGA-BJ-A28S         TCGA-BJ-A28T 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A28V         TCGA-BJ-A28Z         TCGA-BJ-A290 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A2N7         TCGA-BJ-A2N9         TCGA-BJ-A2NA 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A2P4         TCGA-BJ-A3EZ         TCGA-BJ-A3F0 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-CE-A13K         TCGA-CE-A27D         TCGA-CE-A3MD 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-CE-A3ME         TCGA-DE-A0Y2         TCGA-DE-A2OL 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DE-A3KN         TCGA-DJ-A13M         TCGA-DJ-A13O 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A13R         TCGA-DJ-A13S         TCGA-DJ-A13V 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A13W         TCGA-DJ-A13X         TCGA-DJ-A1QD 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A1QE         TCGA-DJ-A1QF         TCGA-DJ-A1QG 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A1QI         TCGA-DJ-A1QL         TCGA-DJ-A1QM 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A1QN         TCGA-DJ-A1QO         TCGA-DJ-A2PN 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2PO         TCGA-DJ-A2PP         TCGA-DJ-A2PQ 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2PR         TCGA-DJ-A2PS         TCGA-DJ-A2PU 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2PV         TCGA-DJ-A2PW         TCGA-DJ-A2PY 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2PZ         TCGA-DJ-A2Q0         TCGA-DJ-A2Q1 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2Q2         TCGA-DJ-A2Q4         TCGA-DJ-A2Q5 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2Q6         TCGA-DJ-A2Q7         TCGA-DJ-A2Q8 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2Q9         TCGA-DJ-A2QA         TCGA-DJ-A2QB 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2QC         TCGA-DO-A1JZ         TCGA-DO-A1K0 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-E3-A3DZ         TCGA-E3-A3E0         TCGA-E3-A3E1 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-E3-A3E3         TCGA-E3-A3E5         TCGA-E8-A2EA 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3CL         TCGA-EL-A3CM         TCGA-EL-A3CN 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3CO         TCGA-EL-A3CP         TCGA-EL-A3CR 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3CS         TCGA-EL-A3CT         TCGA-EL-A3CU 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3CV         TCGA-EL-A3CW         TCGA-EL-A3CX 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3CY         TCGA-EL-A3CZ         TCGA-EL-A3D0 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3D1         TCGA-EL-A3D4         TCGA-EL-A3D5 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3D6         TCGA-EL-A3GO         TCGA-EL-A3GP 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3GQ         TCGA-EL-A3GR         TCGA-EL-A3GS 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3GU         TCGA-EL-A3GV         TCGA-EL-A3GW 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3GX         TCGA-EL-A3GY         TCGA-EL-A3GZ 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3H1         TCGA-EL-A3H2         TCGA-EL-A3H3 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3H4         TCGA-EL-A3H5         TCGA-EL-A3H7 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3H8         TCGA-EL-A3MW         TCGA-EL-A3MX 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3MY         TCGA-EL-A3MZ         TCGA-EL-A3N2 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3N3         TCGA-EM-A1CT         TCGA-EM-A1CU 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A1CV         TCGA-EM-A1CW         TCGA-EM-A1YA 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A1YB         TCGA-EM-A1YC         TCGA-EM-A1YD 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A1YE         TCGA-EM-A22I         TCGA-EM-A22J 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A22L         TCGA-EM-A22M         TCGA-EM-A22O 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A22Q         TCGA-EM-A2CJ         TCGA-EM-A2CK 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A2CL         TCGA-EM-A2CM         TCGA-EM-A2CN 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A2CO         TCGA-EM-A2CP         TCGA-EM-A2CQ 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A2CR         TCGA-EM-A2CU         TCGA-EM-A2OV 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A2OY         TCGA-EM-A2P1         TCGA-EM-A3AI 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A3AJ         TCGA-EM-A3AL         TCGA-EM-A3AN 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A3AO         TCGA-EM-A3AP         TCGA-EM-A3FJ 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A3FL         TCGA-EM-A3FN         TCGA-EM-A3FO 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A3FP         TCGA-ET-A25G         TCGA-ET-A25O 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A2MY         TCGA-ET-A2MZ         TCGA-ET-A2N0 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A2N1         TCGA-ET-A2N4         TCGA-ET-A2N5 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A39I         TCGA-ET-A39J         TCGA-ET-A39L 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A39M         TCGA-ET-A39N         TCGA-ET-A39P 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A39R         TCGA-ET-A39T         TCGA-ET-A3BN 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A3BP         TCGA-ET-A3BS         TCGA-ET-A3BT 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A3BU         TCGA-ET-A3BV         TCGA-ET-A3BW 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A3BX         TCGA-ET-A3DO         TCGA-ET-A3DP 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A3DS         TCGA-ET-A3DT         TCGA-ET-A3DV 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A3DW         TCGA-FE-A22Z         TCGA-FE-A230 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-FE-A231         TCGA-FE-A232         TCGA-FE-A233 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-FE-A234         TCGA-FE-A235         TCGA-FE-A236 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-FE-A237         TCGA-FE-A23A         TCGA-FY-A2QD 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-FY-A3BL         TCGA-FY-A3ON         TCGA-GE-A2C6 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-H2-A2K9         TCGA-IM-A3EB         TCGA-IM-A3ED 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-J8-A3NZ         TCGA-J8-A3O1 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
D32V4, multiclass
[1] "Remove cluster labels:" "SLC26A11 MUTATED"      
clus
  SLC26A11 MUTATED SLC26A11 WILD-TYPE 
                 2                215 
        TCGA-BJ-A0YZ         TCGA-BJ-A0Z0         TCGA-BJ-A0Z2 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A0Z3         TCGA-BJ-A0Z5         TCGA-BJ-A0Z9 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A0ZA         TCGA-BJ-A0ZB         TCGA-BJ-A0ZC 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A0ZE         TCGA-BJ-A0ZF         TCGA-BJ-A0ZG 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A0ZJ         TCGA-BJ-A18Y         TCGA-BJ-A18Z 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A190         TCGA-BJ-A191         TCGA-BJ-A192 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A28R         TCGA-BJ-A28S         TCGA-BJ-A28T 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A28V         TCGA-BJ-A28Z         TCGA-BJ-A290 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A2N7         TCGA-BJ-A2N9         TCGA-BJ-A2NA 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-BJ-A2P4         TCGA-BJ-A3EZ         TCGA-BJ-A3F0 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-CE-A13K         TCGA-CE-A27D         TCGA-CE-A3MD 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-CE-A3ME         TCGA-DE-A0Y2         TCGA-DE-A2OL 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DE-A3KN         TCGA-DJ-A13M         TCGA-DJ-A13O 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A13R         TCGA-DJ-A13S         TCGA-DJ-A13V 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A13W         TCGA-DJ-A13X         TCGA-DJ-A1QD 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A1QE         TCGA-DJ-A1QF         TCGA-DJ-A1QG 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A1QI         TCGA-DJ-A1QL         TCGA-DJ-A1QM 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A1QN         TCGA-DJ-A1QO         TCGA-DJ-A2PN 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2PO         TCGA-DJ-A2PP         TCGA-DJ-A2PQ 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2PR         TCGA-DJ-A2PS         TCGA-DJ-A2PU 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2PV         TCGA-DJ-A2PW         TCGA-DJ-A2PY 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2PZ         TCGA-DJ-A2Q0         TCGA-DJ-A2Q1 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2Q2         TCGA-DJ-A2Q4         TCGA-DJ-A2Q5 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2Q6         TCGA-DJ-A2Q7         TCGA-DJ-A2Q8 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2Q9         TCGA-DJ-A2QA         TCGA-DJ-A2QB 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-DJ-A2QC         TCGA-DO-A1JZ         TCGA-DO-A1K0 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-E3-A3DZ         TCGA-E3-A3E0         TCGA-E3-A3E1 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-E3-A3E3         TCGA-E3-A3E5         TCGA-E8-A2EA 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3CL         TCGA-EL-A3CM         TCGA-EL-A3CN 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3CO         TCGA-EL-A3CP         TCGA-EL-A3CR 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3CS         TCGA-EL-A3CT         TCGA-EL-A3CU 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3CV         TCGA-EL-A3CW         TCGA-EL-A3CX 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3CY         TCGA-EL-A3CZ         TCGA-EL-A3D0 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3D1         TCGA-EL-A3D4         TCGA-EL-A3D5 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3D6         TCGA-EL-A3GO         TCGA-EL-A3GP 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3GQ         TCGA-EL-A3GR         TCGA-EL-A3GS 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3GU         TCGA-EL-A3GV         TCGA-EL-A3GW 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3GX         TCGA-EL-A3GY         TCGA-EL-A3GZ 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3H1         TCGA-EL-A3H2         TCGA-EL-A3H3 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3H4         TCGA-EL-A3H5         TCGA-EL-A3H7 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3H8         TCGA-EL-A3MW         TCGA-EL-A3MX 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3MY         TCGA-EL-A3MZ         TCGA-EL-A3N2 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EL-A3N3         TCGA-EM-A1CT         TCGA-EM-A1CU 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A1CV         TCGA-EM-A1CW         TCGA-EM-A1YA 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A1YB         TCGA-EM-A1YC         TCGA-EM-A1YD 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A1YE         TCGA-EM-A22I         TCGA-EM-A22J 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A22L         TCGA-EM-A22M         TCGA-EM-A22O 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A22Q         TCGA-EM-A2CJ         TCGA-EM-A2CK 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A2CL         TCGA-EM-A2CM         TCGA-EM-A2CN 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A2CO         TCGA-EM-A2CP         TCGA-EM-A2CQ 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A2CR         TCGA-EM-A2CU         TCGA-EM-A2OV 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A2OY         TCGA-EM-A2P1         TCGA-EM-A3AI 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A3AJ         TCGA-EM-A3AL         TCGA-EM-A3AN 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A3AO         TCGA-EM-A3AP         TCGA-EM-A3FJ 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A3FL         TCGA-EM-A3FN         TCGA-EM-A3FO 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-EM-A3FP         TCGA-ET-A25G         TCGA-ET-A25O 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A2MY         TCGA-ET-A2MZ         TCGA-ET-A2N0 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A2N1         TCGA-ET-A2N4         TCGA-ET-A2N5 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A39I         TCGA-ET-A39J         TCGA-ET-A39L 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A39M         TCGA-ET-A39N         TCGA-ET-A39P 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A39R         TCGA-ET-A39T         TCGA-ET-A3BN 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A3BP         TCGA-ET-A3BS         TCGA-ET-A3BT 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A3BU         TCGA-ET-A3BV         TCGA-ET-A3BW 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A3BX         TCGA-ET-A3DO         TCGA-ET-A3DP 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A3DS         TCGA-ET-A3DT         TCGA-ET-A3DV 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-ET-A3DW         TCGA-FE-A22Z         TCGA-FE-A230 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-FE-A231         TCGA-FE-A232         TCGA-FE-A233 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-FE-A234         TCGA-FE-A235         TCGA-FE-A236 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-FE-A237         TCGA-FE-A23A         TCGA-FY-A2QD 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-FY-A3BL         TCGA-FY-A3ON         TCGA-GE-A2C6 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-H2-A2K9         TCGA-IM-A3EB         TCGA-IM-A3ED 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
        TCGA-J8-A3NZ         TCGA-J8-A3O1 
"SLC26A11 WILD-TYPE" "SLC26A11 WILD-TYPE" 
D32V5, multiclass
        clus
vv       SLC26A11 MUTATED SLC26A11 WILD-TYPE
  CLUS_1                1                101
  CLUS_2                0                 36
  CLUS_3                2                 68
  CLUS_4                0                 95
D32V6, multiclass
        clus
vv       SLC26A11 MUTATED SLC26A11 WILD-TYPE
  CLUS_1                1                109
  CLUS_2                1                135
  CLUS_3                1                 56
D32V7, multiclass
        clus
vv       SLC26A11 MUTATED SLC26A11 WILD-TYPE
  CLUS_1                1                104
  CLUS_2                2                114
  CLUS_3                0                101
D32V8, multiclass
        clus
vv       SLC26A11 MUTATED SLC26A11 WILD-TYPE
  CLUS_1                1                 96
  CLUS_2                0                122
  CLUS_3                2                101

Clustering(33) Variable = TSC22D1 MUTATION ANALYSIS
D33V1, multiclass
        clus
vv       TSC22D1 MUTATED TSC22D1 WILD-TYPE
  CLUS_1               0                26
  CLUS_2               3               241
  CLUS_3               0                48
D33V2, multiclass
        clus
vv       TSC22D1 MUTATED TSC22D1 WILD-TYPE
  CLUS_1               1               104
  CLUS_2               0                44
  CLUS_3               2               172
D33V3, multiclass
[1] "Remove cluster labels:" "TSC22D1 MUTATED"       
clus
  TSC22D1 MUTATED TSC22D1 WILD-TYPE 
                2               215 
       TCGA-BJ-A0YZ        TCGA-BJ-A0Z0        TCGA-BJ-A0Z2        TCGA-BJ-A0Z3 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A0Z5        TCGA-BJ-A0Z9        TCGA-BJ-A0ZA        TCGA-BJ-A0ZB 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A0ZC        TCGA-BJ-A0ZE        TCGA-BJ-A0ZF        TCGA-BJ-A0ZG 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A0ZJ        TCGA-BJ-A18Y        TCGA-BJ-A18Z        TCGA-BJ-A190 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A191        TCGA-BJ-A192        TCGA-BJ-A28R        TCGA-BJ-A28S 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A28T        TCGA-BJ-A28V        TCGA-BJ-A28Z        TCGA-BJ-A290 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A2N7        TCGA-BJ-A2N9        TCGA-BJ-A2NA        TCGA-BJ-A2P4 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A3EZ        TCGA-BJ-A3F0        TCGA-CE-A13K        TCGA-CE-A27D 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-CE-A3MD        TCGA-CE-A3ME        TCGA-DE-A0Y2        TCGA-DE-A2OL 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DE-A3KN        TCGA-DJ-A13M        TCGA-DJ-A13O        TCGA-DJ-A13R 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A13S        TCGA-DJ-A13V        TCGA-DJ-A13W        TCGA-DJ-A13X 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A1QD        TCGA-DJ-A1QE        TCGA-DJ-A1QF        TCGA-DJ-A1QG 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A1QI        TCGA-DJ-A1QL        TCGA-DJ-A1QM        TCGA-DJ-A1QN 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A2PN        TCGA-DJ-A2PO        TCGA-DJ-A2PP        TCGA-DJ-A2PQ 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A2PR        TCGA-DJ-A2PS        TCGA-DJ-A2PU        TCGA-DJ-A2PV 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A2PW        TCGA-DJ-A2PY        TCGA-DJ-A2PZ        TCGA-DJ-A2Q0 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A2Q1        TCGA-DJ-A2Q2        TCGA-DJ-A2Q4        TCGA-DJ-A2Q5 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A2Q6        TCGA-DJ-A2Q7        TCGA-DJ-A2Q8        TCGA-DJ-A2Q9 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A2QA        TCGA-DJ-A2QB        TCGA-DJ-A2QC        TCGA-DO-A1JZ 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DO-A1K0        TCGA-E3-A3DY        TCGA-E3-A3DZ        TCGA-E3-A3E0 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-E3-A3E1        TCGA-E3-A3E3        TCGA-E3-A3E5        TCGA-E8-A2EA 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3CL        TCGA-EL-A3CM        TCGA-EL-A3CN        TCGA-EL-A3CO 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3CP        TCGA-EL-A3CR        TCGA-EL-A3CS        TCGA-EL-A3CT 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3CU        TCGA-EL-A3CV        TCGA-EL-A3CW        TCGA-EL-A3CX 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3CY        TCGA-EL-A3CZ        TCGA-EL-A3D0        TCGA-EL-A3D1 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3D4        TCGA-EL-A3D5        TCGA-EL-A3D6        TCGA-EL-A3GO 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3GP        TCGA-EL-A3GQ        TCGA-EL-A3GR        TCGA-EL-A3GS 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3GU        TCGA-EL-A3GV        TCGA-EL-A3GW        TCGA-EL-A3GX 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3GY        TCGA-EL-A3GZ        TCGA-EL-A3H1        TCGA-EL-A3H2 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3H3        TCGA-EL-A3H4        TCGA-EL-A3H5        TCGA-EL-A3H7 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3H8        TCGA-EL-A3MW        TCGA-EL-A3MX        TCGA-EL-A3MY 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3MZ        TCGA-EL-A3N2        TCGA-EL-A3N3        TCGA-EM-A1CT 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A1CU        TCGA-EM-A1CV        TCGA-EM-A1CW        TCGA-EM-A1YA 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A1YB        TCGA-EM-A1YC        TCGA-EM-A1YD        TCGA-EM-A1YE 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A22I        TCGA-EM-A22J        TCGA-EM-A22L        TCGA-EM-A22M 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A22O        TCGA-EM-A22Q        TCGA-EM-A2CJ        TCGA-EM-A2CK 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A2CL        TCGA-EM-A2CM        TCGA-EM-A2CO        TCGA-EM-A2CP 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A2CQ        TCGA-EM-A2CR        TCGA-EM-A2CU        TCGA-EM-A2OV 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A2OY        TCGA-EM-A2P1        TCGA-EM-A3AI        TCGA-EM-A3AJ 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A3AL        TCGA-EM-A3AN        TCGA-EM-A3AO        TCGA-EM-A3AP 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A3FJ        TCGA-EM-A3FL        TCGA-EM-A3FN        TCGA-EM-A3FO 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A3FP        TCGA-ET-A25G        TCGA-ET-A25O        TCGA-ET-A2MY 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A2MZ        TCGA-ET-A2N0        TCGA-ET-A2N1        TCGA-ET-A2N4 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A2N5        TCGA-ET-A39I        TCGA-ET-A39J        TCGA-ET-A39L 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A39M        TCGA-ET-A39N        TCGA-ET-A39P        TCGA-ET-A39R 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A39T        TCGA-ET-A3BN        TCGA-ET-A3BP        TCGA-ET-A3BS 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A3BT        TCGA-ET-A3BU        TCGA-ET-A3BV        TCGA-ET-A3BW 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A3BX        TCGA-ET-A3DO        TCGA-ET-A3DP        TCGA-ET-A3DS 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A3DT        TCGA-ET-A3DV        TCGA-ET-A3DW        TCGA-FE-A22Z 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-FE-A230        TCGA-FE-A231        TCGA-FE-A232        TCGA-FE-A233 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-FE-A234        TCGA-FE-A235        TCGA-FE-A236        TCGA-FE-A237 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-FE-A23A        TCGA-FY-A2QD        TCGA-FY-A3BL        TCGA-FY-A3ON 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-GE-A2C6        TCGA-H2-A2K9        TCGA-IM-A3EB        TCGA-IM-A3ED 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-J8-A3NZ        TCGA-J8-A3O0        TCGA-J8-A3O1 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
D33V4, multiclass
[1] "Remove cluster labels:" "TSC22D1 MUTATED"       
clus
  TSC22D1 MUTATED TSC22D1 WILD-TYPE 
                2               215 
       TCGA-BJ-A0YZ        TCGA-BJ-A0Z0        TCGA-BJ-A0Z2        TCGA-BJ-A0Z3 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A0Z5        TCGA-BJ-A0Z9        TCGA-BJ-A0ZA        TCGA-BJ-A0ZB 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A0ZC        TCGA-BJ-A0ZE        TCGA-BJ-A0ZF        TCGA-BJ-A0ZG 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A0ZJ        TCGA-BJ-A18Y        TCGA-BJ-A18Z        TCGA-BJ-A190 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A191        TCGA-BJ-A192        TCGA-BJ-A28R        TCGA-BJ-A28S 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A28T        TCGA-BJ-A28V        TCGA-BJ-A28Z        TCGA-BJ-A290 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A2N7        TCGA-BJ-A2N9        TCGA-BJ-A2NA        TCGA-BJ-A2P4 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-BJ-A3EZ        TCGA-BJ-A3F0        TCGA-CE-A13K        TCGA-CE-A27D 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-CE-A3MD        TCGA-CE-A3ME        TCGA-DE-A0Y2        TCGA-DE-A2OL 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DE-A3KN        TCGA-DJ-A13M        TCGA-DJ-A13O        TCGA-DJ-A13R 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A13S        TCGA-DJ-A13V        TCGA-DJ-A13W        TCGA-DJ-A13X 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A1QD        TCGA-DJ-A1QE        TCGA-DJ-A1QF        TCGA-DJ-A1QG 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A1QI        TCGA-DJ-A1QL        TCGA-DJ-A1QM        TCGA-DJ-A1QN 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A2PN        TCGA-DJ-A2PO        TCGA-DJ-A2PP        TCGA-DJ-A2PQ 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A2PR        TCGA-DJ-A2PS        TCGA-DJ-A2PU        TCGA-DJ-A2PV 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A2PW        TCGA-DJ-A2PY        TCGA-DJ-A2PZ        TCGA-DJ-A2Q0 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A2Q1        TCGA-DJ-A2Q2        TCGA-DJ-A2Q4        TCGA-DJ-A2Q5 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A2Q6        TCGA-DJ-A2Q7        TCGA-DJ-A2Q8        TCGA-DJ-A2Q9 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DJ-A2QA        TCGA-DJ-A2QB        TCGA-DJ-A2QC        TCGA-DO-A1JZ 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-DO-A1K0        TCGA-E3-A3DY        TCGA-E3-A3DZ        TCGA-E3-A3E0 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-E3-A3E1        TCGA-E3-A3E3        TCGA-E3-A3E5        TCGA-E8-A2EA 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3CL        TCGA-EL-A3CM        TCGA-EL-A3CN        TCGA-EL-A3CO 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3CP        TCGA-EL-A3CR        TCGA-EL-A3CS        TCGA-EL-A3CT 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3CU        TCGA-EL-A3CV        TCGA-EL-A3CW        TCGA-EL-A3CX 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3CY        TCGA-EL-A3CZ        TCGA-EL-A3D0        TCGA-EL-A3D1 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3D4        TCGA-EL-A3D5        TCGA-EL-A3D6        TCGA-EL-A3GO 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3GP        TCGA-EL-A3GQ        TCGA-EL-A3GR        TCGA-EL-A3GS 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3GU        TCGA-EL-A3GV        TCGA-EL-A3GW        TCGA-EL-A3GX 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3GY        TCGA-EL-A3GZ        TCGA-EL-A3H1        TCGA-EL-A3H2 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3H3        TCGA-EL-A3H4        TCGA-EL-A3H5        TCGA-EL-A3H7 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3H8        TCGA-EL-A3MW        TCGA-EL-A3MX        TCGA-EL-A3MY 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EL-A3MZ        TCGA-EL-A3N2        TCGA-EL-A3N3        TCGA-EM-A1CT 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A1CU        TCGA-EM-A1CV        TCGA-EM-A1CW        TCGA-EM-A1YA 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A1YB        TCGA-EM-A1YC        TCGA-EM-A1YD        TCGA-EM-A1YE 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A22I        TCGA-EM-A22J        TCGA-EM-A22L        TCGA-EM-A22M 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A22O        TCGA-EM-A22Q        TCGA-EM-A2CJ        TCGA-EM-A2CK 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A2CL        TCGA-EM-A2CM        TCGA-EM-A2CO        TCGA-EM-A2CP 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A2CQ        TCGA-EM-A2CR        TCGA-EM-A2CU        TCGA-EM-A2OV 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A2OY        TCGA-EM-A2P1        TCGA-EM-A3AI        TCGA-EM-A3AJ 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A3AL        TCGA-EM-A3AN        TCGA-EM-A3AO        TCGA-EM-A3AP 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A3FJ        TCGA-EM-A3FL        TCGA-EM-A3FN        TCGA-EM-A3FO 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-EM-A3FP        TCGA-ET-A25G        TCGA-ET-A25O        TCGA-ET-A2MY 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A2MZ        TCGA-ET-A2N0        TCGA-ET-A2N1        TCGA-ET-A2N4 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A2N5        TCGA-ET-A39I        TCGA-ET-A39J        TCGA-ET-A39L 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A39M        TCGA-ET-A39N        TCGA-ET-A39P        TCGA-ET-A39R 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A39T        TCGA-ET-A3BN        TCGA-ET-A3BP        TCGA-ET-A3BS 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A3BT        TCGA-ET-A3BU        TCGA-ET-A3BV        TCGA-ET-A3BW 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A3BX        TCGA-ET-A3DO        TCGA-ET-A3DP        TCGA-ET-A3DS 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-ET-A3DT        TCGA-ET-A3DV        TCGA-ET-A3DW        TCGA-FE-A22Z 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-FE-A230        TCGA-FE-A231        TCGA-FE-A232        TCGA-FE-A233 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-FE-A234        TCGA-FE-A235        TCGA-FE-A236        TCGA-FE-A237 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-FE-A23A        TCGA-FY-A2QD        TCGA-FY-A3BL        TCGA-FY-A3ON 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-GE-A2C6        TCGA-H2-A2K9        TCGA-IM-A3EB        TCGA-IM-A3ED 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
       TCGA-J8-A3NZ        TCGA-J8-A3O0        TCGA-J8-A3O1 
"TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" "TSC22D1 WILD-TYPE" 
D33V5, multiclass
        clus
vv       TSC22D1 MUTATED TSC22D1 WILD-TYPE
  CLUS_1               1               101
  CLUS_2               0                36
  CLUS_3               0                70
  CLUS_4               2                93
D33V6, multiclass
        clus
vv       TSC22D1 MUTATED TSC22D1 WILD-TYPE
  CLUS_1               1               109
  CLUS_2               2               134
  CLUS_3               0                57
D33V7, multiclass
        clus
vv       TSC22D1 MUTATED TSC22D1 WILD-TYPE
  CLUS_1               1               104
  CLUS_2               1               115
  CLUS_3               1               100
D33V8, multiclass
        clus
vv       TSC22D1 MUTATED TSC22D1 WILD-TYPE
  CLUS_1               1                96
  CLUS_2               2               120
  CLUS_3               0               103

Clustering(34) Variable = ANKRD30A MUTATION ANALYSIS
D34V1, multiclass
        clus
vv       ANKRD30A MUTATED ANKRD30A WILD-TYPE
  CLUS_1                0                 26
  CLUS_2                4                240
  CLUS_3                0                 48
D34V2, multiclass
        clus
vv       ANKRD30A MUTATED ANKRD30A WILD-TYPE
  CLUS_1                3                102
  CLUS_2                0                 44
  CLUS_3                2                172
D34V3, multiclass
[1] "Remove cluster labels:" "ANKRD30A MUTATED"      
clus
  ANKRD30A MUTATED ANKRD30A WILD-TYPE 
                 1                216 
        TCGA-BJ-A0YZ         TCGA-BJ-A0Z0         TCGA-BJ-A0Z2 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A0Z3         TCGA-BJ-A0Z5         TCGA-BJ-A0Z9 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A0ZA         TCGA-BJ-A0ZB         TCGA-BJ-A0ZC 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A0ZE         TCGA-BJ-A0ZF         TCGA-BJ-A0ZG 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A0ZJ         TCGA-BJ-A18Y         TCGA-BJ-A18Z 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A190         TCGA-BJ-A191         TCGA-BJ-A192 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A28R         TCGA-BJ-A28S         TCGA-BJ-A28T 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A28V         TCGA-BJ-A28Z         TCGA-BJ-A290 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A2N7         TCGA-BJ-A2N9         TCGA-BJ-A2NA 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A2P4         TCGA-BJ-A3EZ         TCGA-BJ-A3F0 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-CE-A13K         TCGA-CE-A27D         TCGA-CE-A3MD 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-CE-A3ME         TCGA-DE-A0Y2         TCGA-DE-A2OL 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DE-A3KN         TCGA-DJ-A13M         TCGA-DJ-A13O 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A13R         TCGA-DJ-A13S         TCGA-DJ-A13V 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A13W         TCGA-DJ-A13X         TCGA-DJ-A1QD 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A1QE         TCGA-DJ-A1QF         TCGA-DJ-A1QG 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A1QI         TCGA-DJ-A1QL         TCGA-DJ-A1QM 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A1QN         TCGA-DJ-A1QO         TCGA-DJ-A2PN 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2PO         TCGA-DJ-A2PP         TCGA-DJ-A2PQ 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2PR         TCGA-DJ-A2PS         TCGA-DJ-A2PU 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2PV         TCGA-DJ-A2PW         TCGA-DJ-A2PY 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2PZ         TCGA-DJ-A2Q0         TCGA-DJ-A2Q1 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2Q2         TCGA-DJ-A2Q4         TCGA-DJ-A2Q5 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2Q6         TCGA-DJ-A2Q7         TCGA-DJ-A2Q8 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2Q9         TCGA-DJ-A2QA         TCGA-DJ-A2QB 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2QC         TCGA-DO-A1JZ         TCGA-DO-A1K0 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-E3-A3DY         TCGA-E3-A3DZ         TCGA-E3-A3E0 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-E3-A3E3         TCGA-E3-A3E5         TCGA-E8-A2EA 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3CL         TCGA-EL-A3CM         TCGA-EL-A3CN 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3CO         TCGA-EL-A3CP         TCGA-EL-A3CR 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3CS         TCGA-EL-A3CT         TCGA-EL-A3CU 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3CV         TCGA-EL-A3CW         TCGA-EL-A3CX 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3CY         TCGA-EL-A3CZ         TCGA-EL-A3D0 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3D1         TCGA-EL-A3D4         TCGA-EL-A3D5 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3D6         TCGA-EL-A3GO         TCGA-EL-A3GP 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3GQ         TCGA-EL-A3GR         TCGA-EL-A3GS 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3GU         TCGA-EL-A3GV         TCGA-EL-A3GW 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3GX         TCGA-EL-A3GY         TCGA-EL-A3GZ 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3H1         TCGA-EL-A3H2         TCGA-EL-A3H3 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3H4         TCGA-EL-A3H5         TCGA-EL-A3H7 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3H8         TCGA-EL-A3MW         TCGA-EL-A3MX 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3MY         TCGA-EL-A3MZ         TCGA-EL-A3N2 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3N3         TCGA-EM-A1CT         TCGA-EM-A1CU 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A1CV         TCGA-EM-A1CW         TCGA-EM-A1YA 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A1YB         TCGA-EM-A1YC         TCGA-EM-A1YD 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A1YE         TCGA-EM-A22I         TCGA-EM-A22J 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A22L         TCGA-EM-A22M         TCGA-EM-A22O 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A22Q         TCGA-EM-A2CJ         TCGA-EM-A2CK 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A2CL         TCGA-EM-A2CM         TCGA-EM-A2CN 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A2CO         TCGA-EM-A2CP         TCGA-EM-A2CQ 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A2CR         TCGA-EM-A2CU         TCGA-EM-A2OV 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A2OY         TCGA-EM-A2P1         TCGA-EM-A3AI 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A3AJ         TCGA-EM-A3AL         TCGA-EM-A3AN 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A3AO         TCGA-EM-A3AP         TCGA-EM-A3FJ 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A3FL         TCGA-EM-A3FN         TCGA-EM-A3FO 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A3FP         TCGA-ET-A25G         TCGA-ET-A25O 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A2MY         TCGA-ET-A2MZ         TCGA-ET-A2N0 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A2N1         TCGA-ET-A2N4         TCGA-ET-A2N5 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A39I         TCGA-ET-A39J         TCGA-ET-A39L 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A39M         TCGA-ET-A39N         TCGA-ET-A39P 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A39R         TCGA-ET-A39T         TCGA-ET-A3BN 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A3BP         TCGA-ET-A3BS         TCGA-ET-A3BT 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A3BU         TCGA-ET-A3BV         TCGA-ET-A3BW 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A3BX         TCGA-ET-A3DO         TCGA-ET-A3DP 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A3DS         TCGA-ET-A3DT         TCGA-ET-A3DV 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A3DW         TCGA-FE-A22Z         TCGA-FE-A230 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-FE-A231         TCGA-FE-A232         TCGA-FE-A233 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-FE-A234         TCGA-FE-A235         TCGA-FE-A236 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-FE-A237         TCGA-FE-A23A         TCGA-FY-A2QD 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-FY-A3BL         TCGA-FY-A3ON         TCGA-GE-A2C6 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-H2-A2K9         TCGA-IM-A3EB         TCGA-IM-A3ED 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-J8-A3NZ         TCGA-J8-A3O0         TCGA-J8-A3O1 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
D34V4, multiclass
[1] "Remove cluster labels:" "ANKRD30A MUTATED"      
clus
  ANKRD30A MUTATED ANKRD30A WILD-TYPE 
                 1                216 
        TCGA-BJ-A0YZ         TCGA-BJ-A0Z0         TCGA-BJ-A0Z2 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A0Z3         TCGA-BJ-A0Z5         TCGA-BJ-A0Z9 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A0ZA         TCGA-BJ-A0ZB         TCGA-BJ-A0ZC 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A0ZE         TCGA-BJ-A0ZF         TCGA-BJ-A0ZG 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A0ZJ         TCGA-BJ-A18Y         TCGA-BJ-A18Z 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A190         TCGA-BJ-A191         TCGA-BJ-A192 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A28R         TCGA-BJ-A28S         TCGA-BJ-A28T 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A28V         TCGA-BJ-A28Z         TCGA-BJ-A290 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A2N7         TCGA-BJ-A2N9         TCGA-BJ-A2NA 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-BJ-A2P4         TCGA-BJ-A3EZ         TCGA-BJ-A3F0 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-CE-A13K         TCGA-CE-A27D         TCGA-CE-A3MD 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-CE-A3ME         TCGA-DE-A0Y2         TCGA-DE-A2OL 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DE-A3KN         TCGA-DJ-A13M         TCGA-DJ-A13O 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A13R         TCGA-DJ-A13S         TCGA-DJ-A13V 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A13W         TCGA-DJ-A13X         TCGA-DJ-A1QD 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A1QE         TCGA-DJ-A1QF         TCGA-DJ-A1QG 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A1QI         TCGA-DJ-A1QL         TCGA-DJ-A1QM 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A1QN         TCGA-DJ-A1QO         TCGA-DJ-A2PN 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2PO         TCGA-DJ-A2PP         TCGA-DJ-A2PQ 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2PR         TCGA-DJ-A2PS         TCGA-DJ-A2PU 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2PV         TCGA-DJ-A2PW         TCGA-DJ-A2PY 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2PZ         TCGA-DJ-A2Q0         TCGA-DJ-A2Q1 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2Q2         TCGA-DJ-A2Q4         TCGA-DJ-A2Q5 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2Q6         TCGA-DJ-A2Q7         TCGA-DJ-A2Q8 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2Q9         TCGA-DJ-A2QA         TCGA-DJ-A2QB 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-DJ-A2QC         TCGA-DO-A1JZ         TCGA-DO-A1K0 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-E3-A3DY         TCGA-E3-A3DZ         TCGA-E3-A3E0 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-E3-A3E3         TCGA-E3-A3E5         TCGA-E8-A2EA 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3CL         TCGA-EL-A3CM         TCGA-EL-A3CN 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3CO         TCGA-EL-A3CP         TCGA-EL-A3CR 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3CS         TCGA-EL-A3CT         TCGA-EL-A3CU 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3CV         TCGA-EL-A3CW         TCGA-EL-A3CX 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3CY         TCGA-EL-A3CZ         TCGA-EL-A3D0 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3D1         TCGA-EL-A3D4         TCGA-EL-A3D5 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3D6         TCGA-EL-A3GO         TCGA-EL-A3GP 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3GQ         TCGA-EL-A3GR         TCGA-EL-A3GS 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3GU         TCGA-EL-A3GV         TCGA-EL-A3GW 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3GX         TCGA-EL-A3GY         TCGA-EL-A3GZ 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3H1         TCGA-EL-A3H2         TCGA-EL-A3H3 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3H4         TCGA-EL-A3H5         TCGA-EL-A3H7 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3H8         TCGA-EL-A3MW         TCGA-EL-A3MX 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3MY         TCGA-EL-A3MZ         TCGA-EL-A3N2 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EL-A3N3         TCGA-EM-A1CT         TCGA-EM-A1CU 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A1CV         TCGA-EM-A1CW         TCGA-EM-A1YA 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A1YB         TCGA-EM-A1YC         TCGA-EM-A1YD 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A1YE         TCGA-EM-A22I         TCGA-EM-A22J 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A22L         TCGA-EM-A22M         TCGA-EM-A22O 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A22Q         TCGA-EM-A2CJ         TCGA-EM-A2CK 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A2CL         TCGA-EM-A2CM         TCGA-EM-A2CN 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A2CO         TCGA-EM-A2CP         TCGA-EM-A2CQ 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A2CR         TCGA-EM-A2CU         TCGA-EM-A2OV 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A2OY         TCGA-EM-A2P1         TCGA-EM-A3AI 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A3AJ         TCGA-EM-A3AL         TCGA-EM-A3AN 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A3AO         TCGA-EM-A3AP         TCGA-EM-A3FJ 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A3FL         TCGA-EM-A3FN         TCGA-EM-A3FO 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-EM-A3FP         TCGA-ET-A25G         TCGA-ET-A25O 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A2MY         TCGA-ET-A2MZ         TCGA-ET-A2N0 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A2N1         TCGA-ET-A2N4         TCGA-ET-A2N5 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A39I         TCGA-ET-A39J         TCGA-ET-A39L 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A39M         TCGA-ET-A39N         TCGA-ET-A39P 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A39R         TCGA-ET-A39T         TCGA-ET-A3BN 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A3BP         TCGA-ET-A3BS         TCGA-ET-A3BT 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A3BU         TCGA-ET-A3BV         TCGA-ET-A3BW 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A3BX         TCGA-ET-A3DO         TCGA-ET-A3DP 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A3DS         TCGA-ET-A3DT         TCGA-ET-A3DV 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-ET-A3DW         TCGA-FE-A22Z         TCGA-FE-A230 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-FE-A231         TCGA-FE-A232         TCGA-FE-A233 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-FE-A234         TCGA-FE-A235         TCGA-FE-A236 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-FE-A237         TCGA-FE-A23A         TCGA-FY-A2QD 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-FY-A3BL         TCGA-FY-A3ON         TCGA-GE-A2C6 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-H2-A2K9         TCGA-IM-A3EB         TCGA-IM-A3ED 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
        TCGA-J8-A3NZ         TCGA-J8-A3O0         TCGA-J8-A3O1 
"ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" "ANKRD30A WILD-TYPE" 
D34V5, multiclass
        clus
vv       ANKRD30A MUTATED ANKRD30A WILD-TYPE
  CLUS_1                3                 99
  CLUS_2                0                 36
  CLUS_3                1                 69
  CLUS_4                1                 94
D34V6, multiclass
        clus
vv       ANKRD30A MUTATED ANKRD30A WILD-TYPE
  CLUS_1                3                107
  CLUS_2                1                135
  CLUS_3                1                 56
D34V7, multiclass
        clus
vv       ANKRD30A MUTATED ANKRD30A WILD-TYPE
  CLUS_1                2                103
  CLUS_2                1                115
  CLUS_3                2                 99
D34V8, multiclass
        clus
vv       ANKRD30A MUTATED ANKRD30A WILD-TYPE
  CLUS_1                2                 95
  CLUS_2                2                120
  CLUS_3                1                102

Clustering(35) Variable = FAM155A MUTATION ANALYSIS
D35V1, multiclass
        clus
vv       FAM155A MUTATED FAM155A WILD-TYPE
  CLUS_1               0                26
  CLUS_2               2               242
  CLUS_3               2                46
D35V2, multiclass
        clus
vv       FAM155A MUTATED FAM155A WILD-TYPE
  CLUS_1               1               104
  CLUS_2               1                43
  CLUS_3               2               172
D35V3, multiclass
        clus
vv       FAM155A MUTATED FAM155A WILD-TYPE
  CLUS_1               0                63
  CLUS_2               1                74
  CLUS_3               2                77
D35V4, multiclass
        clus
vv       FAM155A MUTATED FAM155A WILD-TYPE
  CLUS_1               0                27
  CLUS_2               2                93
  CLUS_3               1                94
D35V5, multiclass
[1] "Remove cluster labels:" "FAM155A MUTATED"       
clus
  FAM155A MUTATED FAM155A WILD-TYPE 
                2               301 
       TCGA-BJ-A0YZ        TCGA-BJ-A0Z0        TCGA-BJ-A0Z2        TCGA-BJ-A0Z3 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A0Z5        TCGA-BJ-A0Z9        TCGA-BJ-A0ZA        TCGA-BJ-A0ZB 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A0ZC        TCGA-BJ-A0ZE        TCGA-BJ-A0ZF        TCGA-BJ-A0ZG 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A0ZH        TCGA-BJ-A0ZJ        TCGA-BJ-A18Y        TCGA-BJ-A18Z 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A190        TCGA-BJ-A192        TCGA-BJ-A28R        TCGA-BJ-A28S 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A28T        TCGA-BJ-A28V        TCGA-BJ-A28X        TCGA-BJ-A28Z 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A290        TCGA-BJ-A2N7        TCGA-BJ-A2N8        TCGA-BJ-A2N9 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A2NA        TCGA-BJ-A2P4        TCGA-BJ-A3EZ        TCGA-BJ-A3PR 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A3PT        TCGA-BJ-A3PU        TCGA-CE-A13K        TCGA-CE-A27D 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-CE-A3MD        TCGA-CE-A3ME        TCGA-DE-A0XZ        TCGA-DE-A0Y2 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DE-A0Y3        TCGA-DE-A2OL        TCGA-DE-A3KN        TCGA-DJ-A13L 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A13M        TCGA-DJ-A13O        TCGA-DJ-A13P        TCGA-DJ-A13R 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A13T        TCGA-DJ-A13U        TCGA-DJ-A13V        TCGA-DJ-A13W 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A13X        TCGA-DJ-A1QD        TCGA-DJ-A1QE        TCGA-DJ-A1QF 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A1QG        TCGA-DJ-A1QH        TCGA-DJ-A1QI        TCGA-DJ-A1QL 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A1QM        TCGA-DJ-A1QN        TCGA-DJ-A1QO        TCGA-DJ-A1QQ 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2PN        TCGA-DJ-A2PO        TCGA-DJ-A2PP        TCGA-DJ-A2PQ 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2PR        TCGA-DJ-A2PS        TCGA-DJ-A2PT        TCGA-DJ-A2PU 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2PV        TCGA-DJ-A2PW        TCGA-DJ-A2PX        TCGA-DJ-A2PY 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2PZ        TCGA-DJ-A2Q0        TCGA-DJ-A2Q1        TCGA-DJ-A2Q2 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2Q3        TCGA-DJ-A2Q4        TCGA-DJ-A2Q5        TCGA-DJ-A2Q6 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2Q7        TCGA-DJ-A2Q9        TCGA-DJ-A2QA        TCGA-DJ-A2QB 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2QC        TCGA-DJ-A3UK        TCGA-DJ-A3UM        TCGA-DJ-A3UN 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A3UO        TCGA-DJ-A3UP        TCGA-DJ-A3UQ        TCGA-DJ-A3UR 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A3US        TCGA-DJ-A3UT        TCGA-DJ-A3UU        TCGA-DJ-A3UV 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A3UW        TCGA-DJ-A3UX        TCGA-DJ-A3UY        TCGA-DO-A1JZ 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DO-A1K0        TCGA-DO-A2HM        TCGA-E3-A3DY        TCGA-E3-A3DZ 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-E3-A3E0        TCGA-E3-A3E1        TCGA-E3-A3E2        TCGA-E3-A3E3 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-E3-A3E5        TCGA-E8-A242        TCGA-E8-A2EA        TCGA-EL-A3CL 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3CM        TCGA-EL-A3CN        TCGA-EL-A3CO        TCGA-EL-A3CP 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3CR        TCGA-EL-A3CS        TCGA-EL-A3CU        TCGA-EL-A3CV 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3CW        TCGA-EL-A3CX        TCGA-EL-A3CY        TCGA-EL-A3CZ 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3D0        TCGA-EL-A3D5        TCGA-EL-A3D6        TCGA-EL-A3GO 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3GP        TCGA-EL-A3GQ        TCGA-EL-A3GR        TCGA-EL-A3GS 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3GU        TCGA-EL-A3GV        TCGA-EL-A3GW        TCGA-EL-A3GX 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3GY        TCGA-EL-A3GZ        TCGA-EL-A3H1        TCGA-EL-A3H2 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3H3        TCGA-EL-A3H4        TCGA-EL-A3H5        TCGA-EL-A3H7 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3H8        TCGA-EL-A3MW        TCGA-EL-A3MX        TCGA-EL-A3MY 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3MZ        TCGA-EL-A3N2        TCGA-EL-A3N3        TCGA-EL-A3T0 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3T1        TCGA-EL-A3T2        TCGA-EL-A3T3        TCGA-EL-A3T6 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3T7        TCGA-EL-A3T8        TCGA-EL-A3T9        TCGA-EL-A3TA 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3TB        TCGA-EM-A1CT        TCGA-EM-A1CU        TCGA-EM-A1CV 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A1CW        TCGA-EM-A1YA        TCGA-EM-A1YB        TCGA-EM-A1YC 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A1YD        TCGA-EM-A1YE        TCGA-EM-A22I        TCGA-EM-A22J 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A22K        TCGA-EM-A22L        TCGA-EM-A22N        TCGA-EM-A22P 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A2CK        TCGA-EM-A2CL        TCGA-EM-A2CM        TCGA-EM-A2CN 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A2CO        TCGA-EM-A2CP        TCGA-EM-A2CQ        TCGA-EM-A2CT 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A2OV        TCGA-EM-A2OW        TCGA-EM-A2OX        TCGA-EM-A2OY 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A2P0        TCGA-EM-A2P1        TCGA-EM-A2P2        TCGA-EM-A2P3 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3AI        TCGA-EM-A3AJ        TCGA-EM-A3AK        TCGA-EM-A3AL 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3AN        TCGA-EM-A3AO        TCGA-EM-A3AP        TCGA-EM-A3AQ 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3AR        TCGA-EM-A3FJ        TCGA-EM-A3FK        TCGA-EM-A3FL 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3FM        TCGA-EM-A3FN        TCGA-EM-A3FO        TCGA-EM-A3FP 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3FQ        TCGA-EM-A3FR        TCGA-EM-A3O3        TCGA-EM-A3O6 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3O7        TCGA-EM-A3O8        TCGA-EM-A3O9        TCGA-EM-A3OA 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3OB        TCGA-ET-A25G        TCGA-ET-A25I        TCGA-ET-A25J 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A25K        TCGA-ET-A25O        TCGA-ET-A25R        TCGA-ET-A2MY 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A2MZ        TCGA-ET-A2N0        TCGA-ET-A2N4        TCGA-ET-A2N5 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A39I        TCGA-ET-A39J        TCGA-ET-A39L        TCGA-ET-A39N 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A39O        TCGA-ET-A39P        TCGA-ET-A39R        TCGA-ET-A39S 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A39T        TCGA-ET-A3BN        TCGA-ET-A3BO        TCGA-ET-A3BP 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A3BQ        TCGA-ET-A3BS        TCGA-ET-A3BT        TCGA-ET-A3BU 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A3BW        TCGA-ET-A3BX        TCGA-ET-A3DO        TCGA-ET-A3DP 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A3DQ        TCGA-ET-A3DR        TCGA-ET-A3DS        TCGA-ET-A3DV 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A3DW        TCGA-FE-A22Z        TCGA-FE-A230        TCGA-FE-A231 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FE-A233        TCGA-FE-A234        TCGA-FE-A236        TCGA-FE-A237 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FE-A23A        TCGA-FE-A3PB        TCGA-FE-A3PC        TCGA-FE-A3PD 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FK-A3S3        TCGA-FK-A3SB        TCGA-FK-A3SD        TCGA-FK-A3SE 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FK-A3SG        TCGA-FK-A3SH        TCGA-FY-A2QD        TCGA-FY-A3BL 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FY-A3I4        TCGA-FY-A3I5        TCGA-FY-A3NM        TCGA-FY-A3NN 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FY-A3NP        TCGA-FY-A3ON        TCGA-FY-A3R6        TCGA-FY-A3R7 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FY-A3R8        TCGA-FY-A3R9        TCGA-FY-A3RA        TCGA-FY-A3W9 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FY-A3WA        TCGA-GE-A2C6        TCGA-H2-A26U        TCGA-H2-A2K9 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-H2-A3RH        TCGA-H2-A3RI        TCGA-IM-A3EB        TCGA-IM-A3ED 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-IM-A3U2        TCGA-IM-A3U3        TCGA-J8-A3NZ        TCGA-J8-A3O0 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-J8-A3O1 
"FAM155A WILD-TYPE" 
D35V6, multiclass
[1] "Remove cluster labels:" "FAM155A MUTATED"       
clus
  FAM155A MUTATED FAM155A WILD-TYPE 
                2               301 
       TCGA-BJ-A0YZ        TCGA-BJ-A0Z0        TCGA-BJ-A0Z2        TCGA-BJ-A0Z3 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A0Z5        TCGA-BJ-A0Z9        TCGA-BJ-A0ZA        TCGA-BJ-A0ZB 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A0ZC        TCGA-BJ-A0ZE        TCGA-BJ-A0ZF        TCGA-BJ-A0ZG 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A0ZH        TCGA-BJ-A0ZJ        TCGA-BJ-A18Y        TCGA-BJ-A18Z 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A190        TCGA-BJ-A192        TCGA-BJ-A28R        TCGA-BJ-A28S 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A28T        TCGA-BJ-A28V        TCGA-BJ-A28X        TCGA-BJ-A28Z 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A290        TCGA-BJ-A2N7        TCGA-BJ-A2N8        TCGA-BJ-A2N9 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A2NA        TCGA-BJ-A2P4        TCGA-BJ-A3EZ        TCGA-BJ-A3PR 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-BJ-A3PT        TCGA-BJ-A3PU        TCGA-CE-A13K        TCGA-CE-A27D 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-CE-A3MD        TCGA-CE-A3ME        TCGA-DE-A0XZ        TCGA-DE-A0Y2 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DE-A0Y3        TCGA-DE-A2OL        TCGA-DE-A3KN        TCGA-DJ-A13L 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A13M        TCGA-DJ-A13O        TCGA-DJ-A13P        TCGA-DJ-A13R 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A13T        TCGA-DJ-A13U        TCGA-DJ-A13V        TCGA-DJ-A13W 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A13X        TCGA-DJ-A1QD        TCGA-DJ-A1QE        TCGA-DJ-A1QF 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A1QG        TCGA-DJ-A1QH        TCGA-DJ-A1QI        TCGA-DJ-A1QL 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A1QM        TCGA-DJ-A1QN        TCGA-DJ-A1QO        TCGA-DJ-A1QQ 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2PN        TCGA-DJ-A2PO        TCGA-DJ-A2PP        TCGA-DJ-A2PQ 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2PR        TCGA-DJ-A2PS        TCGA-DJ-A2PT        TCGA-DJ-A2PU 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2PV        TCGA-DJ-A2PW        TCGA-DJ-A2PX        TCGA-DJ-A2PY 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2PZ        TCGA-DJ-A2Q0        TCGA-DJ-A2Q1        TCGA-DJ-A2Q2 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2Q3        TCGA-DJ-A2Q4        TCGA-DJ-A2Q5        TCGA-DJ-A2Q6 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2Q7        TCGA-DJ-A2Q9        TCGA-DJ-A2QA        TCGA-DJ-A2QB 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A2QC        TCGA-DJ-A3UK        TCGA-DJ-A3UM        TCGA-DJ-A3UN 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A3UO        TCGA-DJ-A3UP        TCGA-DJ-A3UQ        TCGA-DJ-A3UR 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A3US        TCGA-DJ-A3UT        TCGA-DJ-A3UU        TCGA-DJ-A3UV 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DJ-A3UW        TCGA-DJ-A3UX        TCGA-DJ-A3UY        TCGA-DO-A1JZ 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-DO-A1K0        TCGA-DO-A2HM        TCGA-E3-A3DY        TCGA-E3-A3DZ 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-E3-A3E0        TCGA-E3-A3E1        TCGA-E3-A3E2        TCGA-E3-A3E3 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-E3-A3E5        TCGA-E8-A242        TCGA-E8-A2EA        TCGA-EL-A3CL 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3CM        TCGA-EL-A3CN        TCGA-EL-A3CO        TCGA-EL-A3CP 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3CR        TCGA-EL-A3CS        TCGA-EL-A3CU        TCGA-EL-A3CV 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3CW        TCGA-EL-A3CX        TCGA-EL-A3CY        TCGA-EL-A3CZ 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3D0        TCGA-EL-A3D5        TCGA-EL-A3D6        TCGA-EL-A3GO 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3GP        TCGA-EL-A3GQ        TCGA-EL-A3GR        TCGA-EL-A3GS 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3GU        TCGA-EL-A3GV        TCGA-EL-A3GW        TCGA-EL-A3GX 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3GY        TCGA-EL-A3GZ        TCGA-EL-A3H1        TCGA-EL-A3H2 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3H3        TCGA-EL-A3H4        TCGA-EL-A3H5        TCGA-EL-A3H7 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3H8        TCGA-EL-A3MW        TCGA-EL-A3MX        TCGA-EL-A3MY 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3MZ        TCGA-EL-A3N2        TCGA-EL-A3N3        TCGA-EL-A3T0 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3T1        TCGA-EL-A3T2        TCGA-EL-A3T3        TCGA-EL-A3T6 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3T7        TCGA-EL-A3T8        TCGA-EL-A3T9        TCGA-EL-A3TA 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EL-A3TB        TCGA-EM-A1CT        TCGA-EM-A1CU        TCGA-EM-A1CV 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A1CW        TCGA-EM-A1YA        TCGA-EM-A1YB        TCGA-EM-A1YC 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A1YD        TCGA-EM-A1YE        TCGA-EM-A22I        TCGA-EM-A22J 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A22K        TCGA-EM-A22L        TCGA-EM-A22N        TCGA-EM-A22P 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A2CK        TCGA-EM-A2CL        TCGA-EM-A2CM        TCGA-EM-A2CN 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A2CO        TCGA-EM-A2CP        TCGA-EM-A2CQ        TCGA-EM-A2CT 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A2OV        TCGA-EM-A2OW        TCGA-EM-A2OX        TCGA-EM-A2OY 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A2P0        TCGA-EM-A2P1        TCGA-EM-A2P2        TCGA-EM-A2P3 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3AI        TCGA-EM-A3AJ        TCGA-EM-A3AK        TCGA-EM-A3AL 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3AN        TCGA-EM-A3AO        TCGA-EM-A3AP        TCGA-EM-A3AQ 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3AR        TCGA-EM-A3FJ        TCGA-EM-A3FK        TCGA-EM-A3FL 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3FM        TCGA-EM-A3FN        TCGA-EM-A3FO        TCGA-EM-A3FP 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3FQ        TCGA-EM-A3FR        TCGA-EM-A3O3        TCGA-EM-A3O6 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3O7        TCGA-EM-A3O8        TCGA-EM-A3O9        TCGA-EM-A3OA 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-EM-A3OB        TCGA-ET-A25G        TCGA-ET-A25I        TCGA-ET-A25J 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A25K        TCGA-ET-A25O        TCGA-ET-A25R        TCGA-ET-A2MY 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A2MZ        TCGA-ET-A2N0        TCGA-ET-A2N4        TCGA-ET-A2N5 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A39I        TCGA-ET-A39J        TCGA-ET-A39L        TCGA-ET-A39N 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A39O        TCGA-ET-A39P        TCGA-ET-A39R        TCGA-ET-A39S 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A39T        TCGA-ET-A3BN        TCGA-ET-A3BO        TCGA-ET-A3BP 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A3BQ        TCGA-ET-A3BS        TCGA-ET-A3BT        TCGA-ET-A3BU 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A3BW        TCGA-ET-A3BX        TCGA-ET-A3DO        TCGA-ET-A3DP 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A3DQ        TCGA-ET-A3DR        TCGA-ET-A3DS        TCGA-ET-A3DV 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-ET-A3DW        TCGA-FE-A22Z        TCGA-FE-A230        TCGA-FE-A231 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FE-A233        TCGA-FE-A234        TCGA-FE-A236        TCGA-FE-A237 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FE-A23A        TCGA-FE-A3PB        TCGA-FE-A3PC        TCGA-FE-A3PD 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FK-A3S3        TCGA-FK-A3SB        TCGA-FK-A3SD        TCGA-FK-A3SE 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FK-A3SG        TCGA-FK-A3SH        TCGA-FY-A2QD        TCGA-FY-A3BL 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FY-A3I4        TCGA-FY-A3I5        TCGA-FY-A3NM        TCGA-FY-A3NN 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FY-A3NP        TCGA-FY-A3ON        TCGA-FY-A3R6        TCGA-FY-A3R7 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FY-A3R8        TCGA-FY-A3R9        TCGA-FY-A3RA        TCGA-FY-A3W9 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-FY-A3WA        TCGA-GE-A2C6        TCGA-H2-A26U        TCGA-H2-A2K9 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-H2-A3RH        TCGA-H2-A3RI        TCGA-IM-A3EB        TCGA-IM-A3ED 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-IM-A3U2        TCGA-IM-A3U3        TCGA-J8-A3NZ        TCGA-J8-A3O0 
"FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" "FAM155A WILD-TYPE" 
       TCGA-J8-A3O1 
"FAM155A WILD-TYPE" 
D35V7, multiclass
        clus
vv       FAM155A MUTATED FAM155A WILD-TYPE
  CLUS_1               1               104
  CLUS_2               3               113
  CLUS_3               0               101
D35V8, multiclass
        clus
vv       FAM155A MUTATED FAM155A WILD-TYPE
  CLUS_1               1                96
  CLUS_2               1               121
  CLUS_3               2               101

Clustering(36) Variable = SLA MUTATION ANALYSIS
D36V1, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           0            26
  CLUS_2           2           242
  CLUS_3           1            47
D36V2, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           3           102
  CLUS_2           0            44
  CLUS_3           0           174
D36V3, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           2            61
  CLUS_2           0            75
  CLUS_3           1            78
D36V4, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           0            27
  CLUS_2           0            95
  CLUS_3           3            92
D36V5, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           3            99
  CLUS_2           0            36
  CLUS_3           0            70
  CLUS_4           0            95
D36V6, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           3           107
  CLUS_2           0           136
  CLUS_3           0            57
D36V7, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           3           102
  CLUS_2           0           116
  CLUS_3           0           101
D36V8, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           3            94
  CLUS_2           0           122
  CLUS_3           0           103

Clustering(37) Variable = ZFHX3 MUTATION ANALYSIS
D37V1, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             2              24
  CLUS_2             6             238
  CLUS_3             2              46
D37V2, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             2             103
  CLUS_2             1              43
  CLUS_3             7             167
D37V3, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             4              59
  CLUS_2             2              73
  CLUS_3             2              77
D37V4, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             1              26
  CLUS_2             2              93
  CLUS_3             5              90
D37V5, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             2             100
  CLUS_2             1              35
  CLUS_3             3              67
  CLUS_4             4              91
D37V6, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             2             108
  CLUS_2             5             131
  CLUS_3             3              54
D37V7, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             2             103
  CLUS_2             5             111
  CLUS_3             3              98
D37V8, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             2              95
  CLUS_2             5             117
  CLUS_3             3             100

Clustering(38) Variable = ARMCX3 MUTATION ANALYSIS
D38V1, multiclass
        clus
vv       ARMCX3 MUTATED ARMCX3 WILD-TYPE
  CLUS_1              0               26
  CLUS_2              2              242
  CLUS_3              1               47
D38V2, multiclass
        clus
vv       ARMCX3 MUTATED ARMCX3 WILD-TYPE
  CLUS_1              1              104
  CLUS_2              1               43
  CLUS_3              1              173
D38V3, multiclass
D38V4, multiclass
D38V5, multiclass
        clus
vv       ARMCX3 MUTATED ARMCX3 WILD-TYPE
  CLUS_1              2              100
  CLUS_2              0               36
  CLUS_3              1               69
  CLUS_4              0               95
D38V6, multiclass
        clus
vv       ARMCX3 MUTATED ARMCX3 WILD-TYPE
  CLUS_1              2              108
  CLUS_2              0              136
  CLUS_3              1               56
D38V7, multiclass
        clus
vv       ARMCX3 MUTATED ARMCX3 WILD-TYPE
  CLUS_1              2              103
  CLUS_2              1              115
  CLUS_3              0              101
D38V8, multiclass
        clus
vv       ARMCX3 MUTATED ARMCX3 WILD-TYPE
  CLUS_1              2               95
  CLUS_2              0              122
  CLUS_3              1              102

Clustering(39) Variable = SLC25A45 MUTATION ANALYSIS
D39V1, multiclass
        clus
vv       SLC25A45 MUTATED SLC25A45 WILD-TYPE
  CLUS_1                1                 25
  CLUS_2                1                243
  CLUS_3                1                 47
D39V2, multiclass
        clus
vv       SLC25A45 MUTATED SLC25A45 WILD-TYPE
  CLUS_1                1                104
  CLUS_2                0                 44
  CLUS_3                2                172
D39V3, multiclass
[1] "Remove cluster labels:" "SLC25A45 MUTATED"      
clus
  SLC25A45 MUTATED SLC25A45 WILD-TYPE 
                 2                215 
        TCGA-BJ-A0YZ         TCGA-BJ-A0Z0         TCGA-BJ-A0Z2 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0Z3         TCGA-BJ-A0Z5         TCGA-BJ-A0Z9 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0ZA         TCGA-BJ-A0ZB         TCGA-BJ-A0ZC 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0ZE         TCGA-BJ-A0ZF         TCGA-BJ-A0ZG 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0ZJ         TCGA-BJ-A18Y         TCGA-BJ-A18Z 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A190         TCGA-BJ-A191         TCGA-BJ-A192 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A28R         TCGA-BJ-A28S         TCGA-BJ-A28T 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A28V         TCGA-BJ-A28Z         TCGA-BJ-A290 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A2N7         TCGA-BJ-A2N9         TCGA-BJ-A2NA 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A2P4         TCGA-BJ-A3EZ         TCGA-BJ-A3F0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-CE-A13K         TCGA-CE-A27D         TCGA-CE-A3MD 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-CE-A3ME         TCGA-DE-A0Y2         TCGA-DE-A2OL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DE-A3KN         TCGA-DJ-A13M         TCGA-DJ-A13O 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A13R         TCGA-DJ-A13S         TCGA-DJ-A13V 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A13W         TCGA-DJ-A13X         TCGA-DJ-A1QD 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QE         TCGA-DJ-A1QF         TCGA-DJ-A1QG 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QI         TCGA-DJ-A1QL         TCGA-DJ-A1QM 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QN         TCGA-DJ-A1QO         TCGA-DJ-A2PN 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PO         TCGA-DJ-A2PP         TCGA-DJ-A2PQ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PR         TCGA-DJ-A2PS         TCGA-DJ-A2PU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PV         TCGA-DJ-A2PW         TCGA-DJ-A2PY 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PZ         TCGA-DJ-A2Q0         TCGA-DJ-A2Q1 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2Q2         TCGA-DJ-A2Q4         TCGA-DJ-A2Q5 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2Q6         TCGA-DJ-A2Q7         TCGA-DJ-A2Q8 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2Q9         TCGA-DJ-A2QA         TCGA-DJ-A2QB 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2QC         TCGA-DO-A1JZ         TCGA-DO-A1K0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-E3-A3DY         TCGA-E3-A3DZ         TCGA-E3-A3E0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-E3-A3E1         TCGA-E3-A3E3         TCGA-E3-A3E5 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-E8-A2EA         TCGA-EL-A3CL         TCGA-EL-A3CM 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CN         TCGA-EL-A3CO         TCGA-EL-A3CP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CR         TCGA-EL-A3CS         TCGA-EL-A3CT 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CU         TCGA-EL-A3CV         TCGA-EL-A3CW 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CX         TCGA-EL-A3CY         TCGA-EL-A3CZ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3D0         TCGA-EL-A3D1         TCGA-EL-A3D5 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3D6         TCGA-EL-A3GO         TCGA-EL-A3GP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GQ         TCGA-EL-A3GR         TCGA-EL-A3GS 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GU         TCGA-EL-A3GV         TCGA-EL-A3GW 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GX         TCGA-EL-A3GY         TCGA-EL-A3GZ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3H1         TCGA-EL-A3H2         TCGA-EL-A3H3 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3H4         TCGA-EL-A3H5         TCGA-EL-A3H7 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3H8         TCGA-EL-A3MW         TCGA-EL-A3MX 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3MY         TCGA-EL-A3MZ         TCGA-EL-A3N2 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3N3         TCGA-EM-A1CT         TCGA-EM-A1CU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A1CV         TCGA-EM-A1CW         TCGA-EM-A1YA 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A1YB         TCGA-EM-A1YC         TCGA-EM-A1YD 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A1YE         TCGA-EM-A22I         TCGA-EM-A22J 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A22L         TCGA-EM-A22M         TCGA-EM-A22O 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A22Q         TCGA-EM-A2CJ         TCGA-EM-A2CK 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2CL         TCGA-EM-A2CM         TCGA-EM-A2CN 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2CP         TCGA-EM-A2CQ         TCGA-EM-A2CR 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2CU         TCGA-EM-A2OV         TCGA-EM-A2OY 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2P1         TCGA-EM-A3AI         TCGA-EM-A3AJ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3AL         TCGA-EM-A3AN         TCGA-EM-A3AO 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3AP         TCGA-EM-A3FJ         TCGA-EM-A3FL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3FN         TCGA-EM-A3FO         TCGA-EM-A3FP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A25G         TCGA-ET-A25O         TCGA-ET-A2MY 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A2MZ         TCGA-ET-A2N0         TCGA-ET-A2N1 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A2N4         TCGA-ET-A2N5         TCGA-ET-A39I 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A39J         TCGA-ET-A39L         TCGA-ET-A39M 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A39N         TCGA-ET-A39P         TCGA-ET-A39R 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A39T         TCGA-ET-A3BN         TCGA-ET-A3BP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3BS         TCGA-ET-A3BT         TCGA-ET-A3BU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3BV         TCGA-ET-A3BW         TCGA-ET-A3BX 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3DO         TCGA-ET-A3DP         TCGA-ET-A3DS 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3DT         TCGA-ET-A3DV         TCGA-ET-A3DW 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A22Z         TCGA-FE-A230         TCGA-FE-A231 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A232         TCGA-FE-A233         TCGA-FE-A234 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A235         TCGA-FE-A236         TCGA-FE-A237 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A23A         TCGA-FY-A2QD         TCGA-FY-A3BL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FY-A3ON         TCGA-GE-A2C6         TCGA-H2-A2K9 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-IM-A3EB         TCGA-IM-A3ED         TCGA-J8-A3NZ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-J8-A3O0         TCGA-J8-A3O1 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
D39V4, multiclass
[1] "Remove cluster labels:" "SLC25A45 MUTATED"      
clus
  SLC25A45 MUTATED SLC25A45 WILD-TYPE 
                 2                215 
        TCGA-BJ-A0YZ         TCGA-BJ-A0Z0         TCGA-BJ-A0Z2 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0Z3         TCGA-BJ-A0Z5         TCGA-BJ-A0Z9 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0ZA         TCGA-BJ-A0ZB         TCGA-BJ-A0ZC 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0ZE         TCGA-BJ-A0ZF         TCGA-BJ-A0ZG 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0ZJ         TCGA-BJ-A18Y         TCGA-BJ-A18Z 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A190         TCGA-BJ-A191         TCGA-BJ-A192 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A28R         TCGA-BJ-A28S         TCGA-BJ-A28T 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A28V         TCGA-BJ-A28Z         TCGA-BJ-A290 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A2N7         TCGA-BJ-A2N9         TCGA-BJ-A2NA 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A2P4         TCGA-BJ-A3EZ         TCGA-BJ-A3F0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-CE-A13K         TCGA-CE-A27D         TCGA-CE-A3MD 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-CE-A3ME         TCGA-DE-A0Y2         TCGA-DE-A2OL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DE-A3KN         TCGA-DJ-A13M         TCGA-DJ-A13O 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A13R         TCGA-DJ-A13S         TCGA-DJ-A13V 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A13W         TCGA-DJ-A13X         TCGA-DJ-A1QD 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QE         TCGA-DJ-A1QF         TCGA-DJ-A1QG 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QI         TCGA-DJ-A1QL         TCGA-DJ-A1QM 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QN         TCGA-DJ-A1QO         TCGA-DJ-A2PN 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PO         TCGA-DJ-A2PP         TCGA-DJ-A2PQ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PR         TCGA-DJ-A2PS         TCGA-DJ-A2PU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PV         TCGA-DJ-A2PW         TCGA-DJ-A2PY 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PZ         TCGA-DJ-A2Q0         TCGA-DJ-A2Q1 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2Q2         TCGA-DJ-A2Q4         TCGA-DJ-A2Q5 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2Q6         TCGA-DJ-A2Q7         TCGA-DJ-A2Q8 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2Q9         TCGA-DJ-A2QA         TCGA-DJ-A2QB 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2QC         TCGA-DO-A1JZ         TCGA-DO-A1K0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-E3-A3DY         TCGA-E3-A3DZ         TCGA-E3-A3E0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-E3-A3E1         TCGA-E3-A3E3         TCGA-E3-A3E5 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-E8-A2EA         TCGA-EL-A3CL         TCGA-EL-A3CM 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CN         TCGA-EL-A3CO         TCGA-EL-A3CP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CR         TCGA-EL-A3CS         TCGA-EL-A3CT 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CU         TCGA-EL-A3CV         TCGA-EL-A3CW 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CX         TCGA-EL-A3CY         TCGA-EL-A3CZ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3D0         TCGA-EL-A3D1         TCGA-EL-A3D5 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3D6         TCGA-EL-A3GO         TCGA-EL-A3GP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GQ         TCGA-EL-A3GR         TCGA-EL-A3GS 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GU         TCGA-EL-A3GV         TCGA-EL-A3GW 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GX         TCGA-EL-A3GY         TCGA-EL-A3GZ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3H1         TCGA-EL-A3H2         TCGA-EL-A3H3 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3H4         TCGA-EL-A3H5         TCGA-EL-A3H7 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3H8         TCGA-EL-A3MW         TCGA-EL-A3MX 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3MY         TCGA-EL-A3MZ         TCGA-EL-A3N2 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3N3         TCGA-EM-A1CT         TCGA-EM-A1CU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A1CV         TCGA-EM-A1CW         TCGA-EM-A1YA 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A1YB         TCGA-EM-A1YC         TCGA-EM-A1YD 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A1YE         TCGA-EM-A22I         TCGA-EM-A22J 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A22L         TCGA-EM-A22M         TCGA-EM-A22O 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A22Q         TCGA-EM-A2CJ         TCGA-EM-A2CK 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2CL         TCGA-EM-A2CM         TCGA-EM-A2CN 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2CP         TCGA-EM-A2CQ         TCGA-EM-A2CR 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2CU         TCGA-EM-A2OV         TCGA-EM-A2OY 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2P1         TCGA-EM-A3AI         TCGA-EM-A3AJ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3AL         TCGA-EM-A3AN         TCGA-EM-A3AO 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3AP         TCGA-EM-A3FJ         TCGA-EM-A3FL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3FN         TCGA-EM-A3FO         TCGA-EM-A3FP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A25G         TCGA-ET-A25O         TCGA-ET-A2MY 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A2MZ         TCGA-ET-A2N0         TCGA-ET-A2N1 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A2N4         TCGA-ET-A2N5         TCGA-ET-A39I 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A39J         TCGA-ET-A39L         TCGA-ET-A39M 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A39N         TCGA-ET-A39P         TCGA-ET-A39R 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A39T         TCGA-ET-A3BN         TCGA-ET-A3BP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3BS         TCGA-ET-A3BT         TCGA-ET-A3BU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3BV         TCGA-ET-A3BW         TCGA-ET-A3BX 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3DO         TCGA-ET-A3DP         TCGA-ET-A3DS 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3DT         TCGA-ET-A3DV         TCGA-ET-A3DW 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A22Z         TCGA-FE-A230         TCGA-FE-A231 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A232         TCGA-FE-A233         TCGA-FE-A234 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A235         TCGA-FE-A236         TCGA-FE-A237 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A23A         TCGA-FY-A2QD         TCGA-FY-A3BL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FY-A3ON         TCGA-GE-A2C6         TCGA-H2-A2K9 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-IM-A3EB         TCGA-IM-A3ED         TCGA-J8-A3NZ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-J8-A3O0         TCGA-J8-A3O1 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
D39V5, multiclass
[1] "Remove cluster labels:" "SLC25A45 MUTATED"      
clus
  SLC25A45 MUTATED SLC25A45 WILD-TYPE 
                 2                301 
        TCGA-BJ-A0YZ         TCGA-BJ-A0Z0         TCGA-BJ-A0Z2 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0Z3         TCGA-BJ-A0Z5         TCGA-BJ-A0Z9 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0ZA         TCGA-BJ-A0ZB         TCGA-BJ-A0ZC 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0ZE         TCGA-BJ-A0ZF         TCGA-BJ-A0ZG 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0ZH         TCGA-BJ-A0ZJ         TCGA-BJ-A18Y 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A18Z         TCGA-BJ-A190         TCGA-BJ-A192 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A28R         TCGA-BJ-A28S         TCGA-BJ-A28T 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A28V         TCGA-BJ-A28X         TCGA-BJ-A28Z 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A290         TCGA-BJ-A2N7         TCGA-BJ-A2N8 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A2N9         TCGA-BJ-A2NA         TCGA-BJ-A2P4 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A3EZ         TCGA-BJ-A3PR         TCGA-BJ-A3PT 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A3PU         TCGA-CE-A13K         TCGA-CE-A27D 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-CE-A3MD         TCGA-CE-A3ME         TCGA-DE-A0XZ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DE-A0Y2         TCGA-DE-A0Y3         TCGA-DE-A2OL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DE-A3KN         TCGA-DJ-A13L         TCGA-DJ-A13M 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A13O         TCGA-DJ-A13P         TCGA-DJ-A13R 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A13T         TCGA-DJ-A13U         TCGA-DJ-A13V 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A13W         TCGA-DJ-A13X         TCGA-DJ-A1QD 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QE         TCGA-DJ-A1QF         TCGA-DJ-A1QG 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QH         TCGA-DJ-A1QI         TCGA-DJ-A1QL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QM         TCGA-DJ-A1QN         TCGA-DJ-A1QO 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QQ         TCGA-DJ-A2PN         TCGA-DJ-A2PO 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PP         TCGA-DJ-A2PQ         TCGA-DJ-A2PR 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PS         TCGA-DJ-A2PT         TCGA-DJ-A2PU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PV         TCGA-DJ-A2PW         TCGA-DJ-A2PX 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PY         TCGA-DJ-A2PZ         TCGA-DJ-A2Q0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2Q1         TCGA-DJ-A2Q2         TCGA-DJ-A2Q3 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2Q4         TCGA-DJ-A2Q5         TCGA-DJ-A2Q6 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2Q7         TCGA-DJ-A2Q9         TCGA-DJ-A2QA 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2QB         TCGA-DJ-A2QC         TCGA-DJ-A3UK 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A3UM         TCGA-DJ-A3UN         TCGA-DJ-A3UO 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A3UP         TCGA-DJ-A3UQ         TCGA-DJ-A3UR 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A3US         TCGA-DJ-A3UT         TCGA-DJ-A3UU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A3UV         TCGA-DJ-A3UW         TCGA-DJ-A3UX 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A3UY         TCGA-DO-A1JZ         TCGA-DO-A1K0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DO-A2HM         TCGA-E3-A3DY         TCGA-E3-A3DZ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-E3-A3E0         TCGA-E3-A3E1         TCGA-E3-A3E2 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-E3-A3E3         TCGA-E3-A3E5         TCGA-E8-A242 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-E8-A2EA         TCGA-EL-A3CL         TCGA-EL-A3CM 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CN         TCGA-EL-A3CO         TCGA-EL-A3CP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CR         TCGA-EL-A3CS         TCGA-EL-A3CT 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CU         TCGA-EL-A3CV         TCGA-EL-A3CW 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CX         TCGA-EL-A3CY         TCGA-EL-A3CZ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3D0         TCGA-EL-A3D5         TCGA-EL-A3D6 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GO         TCGA-EL-A3GP         TCGA-EL-A3GQ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GR         TCGA-EL-A3GS         TCGA-EL-A3GU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GV         TCGA-EL-A3GW         TCGA-EL-A3GX 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GY         TCGA-EL-A3GZ         TCGA-EL-A3H1 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3H2         TCGA-EL-A3H3         TCGA-EL-A3H4 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3H5         TCGA-EL-A3H7         TCGA-EL-A3H8 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3MW         TCGA-EL-A3MX         TCGA-EL-A3MY 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3MZ         TCGA-EL-A3N2         TCGA-EL-A3N3 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3T0         TCGA-EL-A3T1         TCGA-EL-A3T2 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3T3         TCGA-EL-A3T6         TCGA-EL-A3T7 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3T8         TCGA-EL-A3T9         TCGA-EL-A3TA 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3TB         TCGA-EM-A1CS         TCGA-EM-A1CT 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A1CU         TCGA-EM-A1CV         TCGA-EM-A1CW 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A1YA         TCGA-EM-A1YB         TCGA-EM-A1YC 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A1YD         TCGA-EM-A1YE         TCGA-EM-A22I 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A22J         TCGA-EM-A22K         TCGA-EM-A22L 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A22N         TCGA-EM-A22P         TCGA-EM-A2CK 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2CL         TCGA-EM-A2CM         TCGA-EM-A2CN 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2CP         TCGA-EM-A2CQ         TCGA-EM-A2CT 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2OV         TCGA-EM-A2OW         TCGA-EM-A2OX 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2OY         TCGA-EM-A2P0         TCGA-EM-A2P1 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2P2         TCGA-EM-A2P3         TCGA-EM-A3AI 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3AJ         TCGA-EM-A3AK         TCGA-EM-A3AL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3AN         TCGA-EM-A3AO         TCGA-EM-A3AP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3AQ         TCGA-EM-A3AR         TCGA-EM-A3FJ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3FK         TCGA-EM-A3FL         TCGA-EM-A3FM 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3FN         TCGA-EM-A3FO         TCGA-EM-A3FP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3FQ         TCGA-EM-A3FR         TCGA-EM-A3O3 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3O6         TCGA-EM-A3O7         TCGA-EM-A3O8 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3O9         TCGA-EM-A3OA         TCGA-EM-A3OB 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A25G         TCGA-ET-A25I         TCGA-ET-A25J 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A25K         TCGA-ET-A25O         TCGA-ET-A25R 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A2MY         TCGA-ET-A2MZ         TCGA-ET-A2N0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A2N4         TCGA-ET-A2N5         TCGA-ET-A39I 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A39J         TCGA-ET-A39L         TCGA-ET-A39N 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A39O         TCGA-ET-A39P         TCGA-ET-A39R 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A39S         TCGA-ET-A39T         TCGA-ET-A3BN 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3BO         TCGA-ET-A3BP         TCGA-ET-A3BQ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3BS         TCGA-ET-A3BT         TCGA-ET-A3BU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3BW         TCGA-ET-A3BX         TCGA-ET-A3DO 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3DP         TCGA-ET-A3DQ         TCGA-ET-A3DS 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3DV         TCGA-ET-A3DW         TCGA-FE-A22Z 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A230         TCGA-FE-A231         TCGA-FE-A233 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A234         TCGA-FE-A236         TCGA-FE-A237 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A23A         TCGA-FE-A3PB         TCGA-FE-A3PC 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A3PD         TCGA-FK-A3S3         TCGA-FK-A3SB 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FK-A3SD         TCGA-FK-A3SE         TCGA-FK-A3SG 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FK-A3SH         TCGA-FY-A2QD         TCGA-FY-A3BL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FY-A3I4         TCGA-FY-A3I5         TCGA-FY-A3NM 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FY-A3NN         TCGA-FY-A3NP         TCGA-FY-A3ON 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FY-A3R6         TCGA-FY-A3R7         TCGA-FY-A3R8 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FY-A3R9         TCGA-FY-A3RA         TCGA-FY-A3W9 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FY-A3WA         TCGA-GE-A2C6         TCGA-H2-A26U 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-H2-A2K9         TCGA-H2-A3RH         TCGA-H2-A3RI 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-IM-A3EB         TCGA-IM-A3ED         TCGA-IM-A3U2 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-IM-A3U3         TCGA-J8-A3NZ         TCGA-J8-A3O0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-J8-A3O1 
"SLC25A45 WILD-TYPE" 
D39V6, multiclass
[1] "Remove cluster labels:" "SLC25A45 MUTATED"      
clus
  SLC25A45 MUTATED SLC25A45 WILD-TYPE 
                 2                301 
        TCGA-BJ-A0YZ         TCGA-BJ-A0Z0         TCGA-BJ-A0Z2 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0Z3         TCGA-BJ-A0Z5         TCGA-BJ-A0Z9 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0ZA         TCGA-BJ-A0ZB         TCGA-BJ-A0ZC 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0ZE         TCGA-BJ-A0ZF         TCGA-BJ-A0ZG 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A0ZH         TCGA-BJ-A0ZJ         TCGA-BJ-A18Y 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A18Z         TCGA-BJ-A190         TCGA-BJ-A192 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A28R         TCGA-BJ-A28S         TCGA-BJ-A28T 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A28V         TCGA-BJ-A28X         TCGA-BJ-A28Z 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A290         TCGA-BJ-A2N7         TCGA-BJ-A2N8 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A2N9         TCGA-BJ-A2NA         TCGA-BJ-A2P4 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A3EZ         TCGA-BJ-A3PR         TCGA-BJ-A3PT 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-BJ-A3PU         TCGA-CE-A13K         TCGA-CE-A27D 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-CE-A3MD         TCGA-CE-A3ME         TCGA-DE-A0XZ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DE-A0Y2         TCGA-DE-A0Y3         TCGA-DE-A2OL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DE-A3KN         TCGA-DJ-A13L         TCGA-DJ-A13M 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A13O         TCGA-DJ-A13P         TCGA-DJ-A13R 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A13T         TCGA-DJ-A13U         TCGA-DJ-A13V 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A13W         TCGA-DJ-A13X         TCGA-DJ-A1QD 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QE         TCGA-DJ-A1QF         TCGA-DJ-A1QG 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QH         TCGA-DJ-A1QI         TCGA-DJ-A1QL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QM         TCGA-DJ-A1QN         TCGA-DJ-A1QO 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A1QQ         TCGA-DJ-A2PN         TCGA-DJ-A2PO 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PP         TCGA-DJ-A2PQ         TCGA-DJ-A2PR 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PS         TCGA-DJ-A2PT         TCGA-DJ-A2PU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PV         TCGA-DJ-A2PW         TCGA-DJ-A2PX 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2PY         TCGA-DJ-A2PZ         TCGA-DJ-A2Q0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2Q1         TCGA-DJ-A2Q2         TCGA-DJ-A2Q3 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2Q4         TCGA-DJ-A2Q5         TCGA-DJ-A2Q6 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2Q7         TCGA-DJ-A2Q9         TCGA-DJ-A2QA 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A2QB         TCGA-DJ-A2QC         TCGA-DJ-A3UK 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A3UM         TCGA-DJ-A3UN         TCGA-DJ-A3UO 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A3UP         TCGA-DJ-A3UQ         TCGA-DJ-A3UR 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A3US         TCGA-DJ-A3UT         TCGA-DJ-A3UU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A3UV         TCGA-DJ-A3UW         TCGA-DJ-A3UX 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DJ-A3UY         TCGA-DO-A1JZ         TCGA-DO-A1K0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-DO-A2HM         TCGA-E3-A3DY         TCGA-E3-A3DZ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-E3-A3E0         TCGA-E3-A3E1         TCGA-E3-A3E2 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-E3-A3E3         TCGA-E3-A3E5         TCGA-E8-A242 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-E8-A2EA         TCGA-EL-A3CL         TCGA-EL-A3CM 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CN         TCGA-EL-A3CO         TCGA-EL-A3CP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CR         TCGA-EL-A3CS         TCGA-EL-A3CT 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CU         TCGA-EL-A3CV         TCGA-EL-A3CW 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3CX         TCGA-EL-A3CY         TCGA-EL-A3CZ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3D0         TCGA-EL-A3D5         TCGA-EL-A3D6 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GO         TCGA-EL-A3GP         TCGA-EL-A3GQ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GR         TCGA-EL-A3GS         TCGA-EL-A3GU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GV         TCGA-EL-A3GW         TCGA-EL-A3GX 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3GY         TCGA-EL-A3GZ         TCGA-EL-A3H1 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3H2         TCGA-EL-A3H3         TCGA-EL-A3H4 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3H5         TCGA-EL-A3H7         TCGA-EL-A3H8 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3MW         TCGA-EL-A3MX         TCGA-EL-A3MY 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3MZ         TCGA-EL-A3N2         TCGA-EL-A3N3 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3T0         TCGA-EL-A3T1         TCGA-EL-A3T2 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3T3         TCGA-EL-A3T6         TCGA-EL-A3T7 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3T8         TCGA-EL-A3T9         TCGA-EL-A3TA 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EL-A3TB         TCGA-EM-A1CS         TCGA-EM-A1CT 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A1CU         TCGA-EM-A1CV         TCGA-EM-A1CW 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A1YA         TCGA-EM-A1YB         TCGA-EM-A1YC 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A1YD         TCGA-EM-A1YE         TCGA-EM-A22I 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A22J         TCGA-EM-A22K         TCGA-EM-A22L 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A22N         TCGA-EM-A22P         TCGA-EM-A2CK 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2CL         TCGA-EM-A2CM         TCGA-EM-A2CN 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2CP         TCGA-EM-A2CQ         TCGA-EM-A2CT 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2OV         TCGA-EM-A2OW         TCGA-EM-A2OX 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2OY         TCGA-EM-A2P0         TCGA-EM-A2P1 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A2P2         TCGA-EM-A2P3         TCGA-EM-A3AI 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3AJ         TCGA-EM-A3AK         TCGA-EM-A3AL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3AN         TCGA-EM-A3AO         TCGA-EM-A3AP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3AQ         TCGA-EM-A3AR         TCGA-EM-A3FJ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3FK         TCGA-EM-A3FL         TCGA-EM-A3FM 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3FN         TCGA-EM-A3FO         TCGA-EM-A3FP 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3FQ         TCGA-EM-A3FR         TCGA-EM-A3O3 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3O6         TCGA-EM-A3O7         TCGA-EM-A3O8 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-EM-A3O9         TCGA-EM-A3OA         TCGA-EM-A3OB 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A25G         TCGA-ET-A25I         TCGA-ET-A25J 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A25K         TCGA-ET-A25O         TCGA-ET-A25R 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A2MY         TCGA-ET-A2MZ         TCGA-ET-A2N0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A2N4         TCGA-ET-A2N5         TCGA-ET-A39I 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A39J         TCGA-ET-A39L         TCGA-ET-A39N 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A39O         TCGA-ET-A39P         TCGA-ET-A39R 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A39S         TCGA-ET-A39T         TCGA-ET-A3BN 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3BO         TCGA-ET-A3BP         TCGA-ET-A3BQ 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3BS         TCGA-ET-A3BT         TCGA-ET-A3BU 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3BW         TCGA-ET-A3BX         TCGA-ET-A3DO 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3DP         TCGA-ET-A3DQ         TCGA-ET-A3DS 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-ET-A3DV         TCGA-ET-A3DW         TCGA-FE-A22Z 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A230         TCGA-FE-A231         TCGA-FE-A233 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A234         TCGA-FE-A236         TCGA-FE-A237 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A23A         TCGA-FE-A3PB         TCGA-FE-A3PC 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FE-A3PD         TCGA-FK-A3S3         TCGA-FK-A3SB 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FK-A3SD         TCGA-FK-A3SE         TCGA-FK-A3SG 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FK-A3SH         TCGA-FY-A2QD         TCGA-FY-A3BL 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FY-A3I4         TCGA-FY-A3I5         TCGA-FY-A3NM 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FY-A3NN         TCGA-FY-A3NP         TCGA-FY-A3ON 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FY-A3R6         TCGA-FY-A3R7         TCGA-FY-A3R8 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FY-A3R9         TCGA-FY-A3RA         TCGA-FY-A3W9 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-FY-A3WA         TCGA-GE-A2C6         TCGA-H2-A26U 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-H2-A2K9         TCGA-H2-A3RH         TCGA-H2-A3RI 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-IM-A3EB         TCGA-IM-A3ED         TCGA-IM-A3U2 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-IM-A3U3         TCGA-J8-A3NZ         TCGA-J8-A3O0 
"SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" "SLC25A45 WILD-TYPE" 
        TCGA-J8-A3O1 
"SLC25A45 WILD-TYPE" 
D39V7, multiclass
        clus
vv       SLC25A45 MUTATED SLC25A45 WILD-TYPE
  CLUS_1                1                104
  CLUS_2                0                116
  CLUS_3                2                 99
D39V8, multiclass
        clus
vv       SLC25A45 MUTATED SLC25A45 WILD-TYPE
  CLUS_1                1                 96
  CLUS_2                2                120
  CLUS_3                0                103

Clustering(40) Variable = COL5A3 MUTATION ANALYSIS
D40V1, multiclass
        clus
vv       COL5A3 MUTATED COL5A3 WILD-TYPE
  CLUS_1              0               26
  CLUS_2              6              238
  CLUS_3              0               48
D40V2, multiclass
        clus
vv       COL5A3 MUTATED COL5A3 WILD-TYPE
  CLUS_1              2              103
  CLUS_2              1               43
  CLUS_3              3              171
D40V3, multiclass
        clus
vv       COL5A3 MUTATED COL5A3 WILD-TYPE
  CLUS_1              0               63
  CLUS_2              1               74
  CLUS_3              2               77
D40V4, multiclass
        clus
vv       COL5A3 MUTATED COL5A3 WILD-TYPE
  CLUS_1              0               27
  CLUS_2              2               93
  CLUS_3              1               94
D40V5, multiclass
        clus
vv       COL5A3 MUTATED COL5A3 WILD-TYPE
  CLUS_1              2              100
  CLUS_2              3               33
  CLUS_3              0               70
  CLUS_4              1               94
D40V6, multiclass
        clus
vv       COL5A3 MUTATED COL5A3 WILD-TYPE
  CLUS_1              3              107
  CLUS_2              3              133
  CLUS_3              0               57
D40V7, multiclass
        clus
vv       COL5A3 MUTATED COL5A3 WILD-TYPE
  CLUS_1              2              103
  CLUS_2              3              113
  CLUS_3              1              100
D40V8, multiclass
        clus
vv       COL5A3 MUTATED COL5A3 WILD-TYPE
  CLUS_1              2               95
  CLUS_2              1              121
  CLUS_3              3              100

Clustering(41) Variable = CDC27 MUTATION ANALYSIS
D41V1, multiclass
        clus
vv       CDC27 MUTATED CDC27 WILD-TYPE
  CLUS_1             0              26
  CLUS_2             3             241
  CLUS_3             0              48
D41V2, multiclass
        clus
vv       CDC27 MUTATED CDC27 WILD-TYPE
  CLUS_1             1             104
  CLUS_2             0              44
  CLUS_3             2             172
D41V3, multiclass
[1] "Remove cluster labels:" "CDC27 MUTATED"         
clus
  CDC27 MUTATED CDC27 WILD-TYPE 
              1             216 
     TCGA-BJ-A0YZ      TCGA-BJ-A0Z0      TCGA-BJ-A0Z2      TCGA-BJ-A0Z3 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A0Z5      TCGA-BJ-A0Z9      TCGA-BJ-A0ZA      TCGA-BJ-A0ZB 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A0ZC      TCGA-BJ-A0ZE      TCGA-BJ-A0ZF      TCGA-BJ-A0ZG 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A0ZJ      TCGA-BJ-A18Y      TCGA-BJ-A18Z      TCGA-BJ-A190 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A191      TCGA-BJ-A192      TCGA-BJ-A28R      TCGA-BJ-A28S 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A28T      TCGA-BJ-A28V      TCGA-BJ-A28Z      TCGA-BJ-A290 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A2N7      TCGA-BJ-A2N9      TCGA-BJ-A2NA      TCGA-BJ-A2P4 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A3EZ      TCGA-BJ-A3F0      TCGA-CE-A13K      TCGA-CE-A27D 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-CE-A3MD      TCGA-CE-A3ME      TCGA-DE-A0Y2      TCGA-DE-A2OL 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DE-A3KN      TCGA-DJ-A13M      TCGA-DJ-A13O      TCGA-DJ-A13R 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A13S      TCGA-DJ-A13V      TCGA-DJ-A13W      TCGA-DJ-A13X 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A1QD      TCGA-DJ-A1QE      TCGA-DJ-A1QF      TCGA-DJ-A1QG 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A1QL      TCGA-DJ-A1QM      TCGA-DJ-A1QN      TCGA-DJ-A1QO 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A2PN      TCGA-DJ-A2PO      TCGA-DJ-A2PP      TCGA-DJ-A2PQ 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A2PR      TCGA-DJ-A2PS      TCGA-DJ-A2PU      TCGA-DJ-A2PV 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A2PW      TCGA-DJ-A2PY      TCGA-DJ-A2PZ      TCGA-DJ-A2Q0 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A2Q1      TCGA-DJ-A2Q2      TCGA-DJ-A2Q4      TCGA-DJ-A2Q5 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A2Q6      TCGA-DJ-A2Q7      TCGA-DJ-A2Q8      TCGA-DJ-A2Q9 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A2QA      TCGA-DJ-A2QB      TCGA-DJ-A2QC      TCGA-DO-A1JZ 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DO-A1K0      TCGA-E3-A3DY      TCGA-E3-A3DZ      TCGA-E3-A3E0 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-E3-A3E1      TCGA-E3-A3E3      TCGA-E3-A3E5      TCGA-E8-A2EA 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3CL      TCGA-EL-A3CM      TCGA-EL-A3CN      TCGA-EL-A3CO 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3CP      TCGA-EL-A3CR      TCGA-EL-A3CS      TCGA-EL-A3CT 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3CU      TCGA-EL-A3CV      TCGA-EL-A3CW      TCGA-EL-A3CX 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3CY      TCGA-EL-A3CZ      TCGA-EL-A3D0      TCGA-EL-A3D1 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3D4      TCGA-EL-A3D5      TCGA-EL-A3D6      TCGA-EL-A3GO 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3GP      TCGA-EL-A3GQ      TCGA-EL-A3GR      TCGA-EL-A3GS 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3GU      TCGA-EL-A3GV      TCGA-EL-A3GW      TCGA-EL-A3GX 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3GY      TCGA-EL-A3GZ      TCGA-EL-A3H1      TCGA-EL-A3H2 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3H3      TCGA-EL-A3H4      TCGA-EL-A3H5      TCGA-EL-A3H7 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3H8      TCGA-EL-A3MW      TCGA-EL-A3MX      TCGA-EL-A3MY 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3MZ      TCGA-EL-A3N2      TCGA-EL-A3N3      TCGA-EM-A1CT 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A1CU      TCGA-EM-A1CV      TCGA-EM-A1CW      TCGA-EM-A1YA 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A1YB      TCGA-EM-A1YC      TCGA-EM-A1YD      TCGA-EM-A1YE 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A22I      TCGA-EM-A22J      TCGA-EM-A22L      TCGA-EM-A22M 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A22O      TCGA-EM-A22Q      TCGA-EM-A2CJ      TCGA-EM-A2CK 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A2CL      TCGA-EM-A2CM      TCGA-EM-A2CN      TCGA-EM-A2CO 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A2CP      TCGA-EM-A2CQ      TCGA-EM-A2CR      TCGA-EM-A2CU 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A2OV      TCGA-EM-A2OY      TCGA-EM-A2P1      TCGA-EM-A3AI 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A3AJ      TCGA-EM-A3AL      TCGA-EM-A3AN      TCGA-EM-A3AO 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A3AP      TCGA-EM-A3FJ      TCGA-EM-A3FL      TCGA-EM-A3FN 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A3FO      TCGA-EM-A3FP      TCGA-ET-A25G      TCGA-ET-A25O 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A2MY      TCGA-ET-A2MZ      TCGA-ET-A2N0      TCGA-ET-A2N1 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A2N4      TCGA-ET-A2N5      TCGA-ET-A39I      TCGA-ET-A39J 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A39L      TCGA-ET-A39M      TCGA-ET-A39N      TCGA-ET-A39P 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A39R      TCGA-ET-A39T      TCGA-ET-A3BN      TCGA-ET-A3BP 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A3BS      TCGA-ET-A3BT      TCGA-ET-A3BU      TCGA-ET-A3BV 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A3BW      TCGA-ET-A3BX      TCGA-ET-A3DO      TCGA-ET-A3DP 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A3DS      TCGA-ET-A3DT      TCGA-ET-A3DV      TCGA-ET-A3DW 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-FE-A22Z      TCGA-FE-A230      TCGA-FE-A231      TCGA-FE-A232 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-FE-A233      TCGA-FE-A234      TCGA-FE-A235      TCGA-FE-A236 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-FE-A237      TCGA-FE-A23A      TCGA-FY-A2QD      TCGA-FY-A3BL 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-FY-A3ON      TCGA-GE-A2C6      TCGA-H2-A2K9      TCGA-IM-A3EB 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-IM-A3ED      TCGA-J8-A3NZ      TCGA-J8-A3O0      TCGA-J8-A3O1 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
D41V4, multiclass
[1] "Remove cluster labels:" "CDC27 MUTATED"         
clus
  CDC27 MUTATED CDC27 WILD-TYPE 
              1             216 
     TCGA-BJ-A0YZ      TCGA-BJ-A0Z0      TCGA-BJ-A0Z2      TCGA-BJ-A0Z3 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A0Z5      TCGA-BJ-A0Z9      TCGA-BJ-A0ZA      TCGA-BJ-A0ZB 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A0ZC      TCGA-BJ-A0ZE      TCGA-BJ-A0ZF      TCGA-BJ-A0ZG 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A0ZJ      TCGA-BJ-A18Y      TCGA-BJ-A18Z      TCGA-BJ-A190 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A191      TCGA-BJ-A192      TCGA-BJ-A28R      TCGA-BJ-A28S 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A28T      TCGA-BJ-A28V      TCGA-BJ-A28Z      TCGA-BJ-A290 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A2N7      TCGA-BJ-A2N9      TCGA-BJ-A2NA      TCGA-BJ-A2P4 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-BJ-A3EZ      TCGA-BJ-A3F0      TCGA-CE-A13K      TCGA-CE-A27D 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-CE-A3MD      TCGA-CE-A3ME      TCGA-DE-A0Y2      TCGA-DE-A2OL 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DE-A3KN      TCGA-DJ-A13M      TCGA-DJ-A13O      TCGA-DJ-A13R 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A13S      TCGA-DJ-A13V      TCGA-DJ-A13W      TCGA-DJ-A13X 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A1QD      TCGA-DJ-A1QE      TCGA-DJ-A1QF      TCGA-DJ-A1QG 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A1QL      TCGA-DJ-A1QM      TCGA-DJ-A1QN      TCGA-DJ-A1QO 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A2PN      TCGA-DJ-A2PO      TCGA-DJ-A2PP      TCGA-DJ-A2PQ 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A2PR      TCGA-DJ-A2PS      TCGA-DJ-A2PU      TCGA-DJ-A2PV 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A2PW      TCGA-DJ-A2PY      TCGA-DJ-A2PZ      TCGA-DJ-A2Q0 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A2Q1      TCGA-DJ-A2Q2      TCGA-DJ-A2Q4      TCGA-DJ-A2Q5 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A2Q6      TCGA-DJ-A2Q7      TCGA-DJ-A2Q8      TCGA-DJ-A2Q9 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DJ-A2QA      TCGA-DJ-A2QB      TCGA-DJ-A2QC      TCGA-DO-A1JZ 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-DO-A1K0      TCGA-E3-A3DY      TCGA-E3-A3DZ      TCGA-E3-A3E0 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-E3-A3E1      TCGA-E3-A3E3      TCGA-E3-A3E5      TCGA-E8-A2EA 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3CL      TCGA-EL-A3CM      TCGA-EL-A3CN      TCGA-EL-A3CO 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3CP      TCGA-EL-A3CR      TCGA-EL-A3CS      TCGA-EL-A3CT 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3CU      TCGA-EL-A3CV      TCGA-EL-A3CW      TCGA-EL-A3CX 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3CY      TCGA-EL-A3CZ      TCGA-EL-A3D0      TCGA-EL-A3D1 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3D4      TCGA-EL-A3D5      TCGA-EL-A3D6      TCGA-EL-A3GO 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3GP      TCGA-EL-A3GQ      TCGA-EL-A3GR      TCGA-EL-A3GS 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3GU      TCGA-EL-A3GV      TCGA-EL-A3GW      TCGA-EL-A3GX 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3GY      TCGA-EL-A3GZ      TCGA-EL-A3H1      TCGA-EL-A3H2 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3H3      TCGA-EL-A3H4      TCGA-EL-A3H5      TCGA-EL-A3H7 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3H8      TCGA-EL-A3MW      TCGA-EL-A3MX      TCGA-EL-A3MY 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EL-A3MZ      TCGA-EL-A3N2      TCGA-EL-A3N3      TCGA-EM-A1CT 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A1CU      TCGA-EM-A1CV      TCGA-EM-A1CW      TCGA-EM-A1YA 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A1YB      TCGA-EM-A1YC      TCGA-EM-A1YD      TCGA-EM-A1YE 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A22I      TCGA-EM-A22J      TCGA-EM-A22L      TCGA-EM-A22M 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A22O      TCGA-EM-A22Q      TCGA-EM-A2CJ      TCGA-EM-A2CK 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A2CL      TCGA-EM-A2CM      TCGA-EM-A2CN      TCGA-EM-A2CO 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A2CP      TCGA-EM-A2CQ      TCGA-EM-A2CR      TCGA-EM-A2CU 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A2OV      TCGA-EM-A2OY      TCGA-EM-A2P1      TCGA-EM-A3AI 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A3AJ      TCGA-EM-A3AL      TCGA-EM-A3AN      TCGA-EM-A3AO 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A3AP      TCGA-EM-A3FJ      TCGA-EM-A3FL      TCGA-EM-A3FN 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-EM-A3FO      TCGA-EM-A3FP      TCGA-ET-A25G      TCGA-ET-A25O 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A2MY      TCGA-ET-A2MZ      TCGA-ET-A2N0      TCGA-ET-A2N1 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A2N4      TCGA-ET-A2N5      TCGA-ET-A39I      TCGA-ET-A39J 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A39L      TCGA-ET-A39M      TCGA-ET-A39N      TCGA-ET-A39P 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A39R      TCGA-ET-A39T      TCGA-ET-A3BN      TCGA-ET-A3BP 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A3BS      TCGA-ET-A3BT      TCGA-ET-A3BU      TCGA-ET-A3BV 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A3BW      TCGA-ET-A3BX      TCGA-ET-A3DO      TCGA-ET-A3DP 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-ET-A3DS      TCGA-ET-A3DT      TCGA-ET-A3DV      TCGA-ET-A3DW 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-FE-A22Z      TCGA-FE-A230      TCGA-FE-A231      TCGA-FE-A232 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-FE-A233      TCGA-FE-A234      TCGA-FE-A235      TCGA-FE-A236 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-FE-A237      TCGA-FE-A23A      TCGA-FY-A2QD      TCGA-FY-A3BL 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-FY-A3ON      TCGA-GE-A2C6      TCGA-H2-A2K9      TCGA-IM-A3EB 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
     TCGA-IM-A3ED      TCGA-J8-A3NZ      TCGA-J8-A3O0      TCGA-J8-A3O1 
"CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" "CDC27 WILD-TYPE" 
D41V5, multiclass
        clus
vv       CDC27 MUTATED CDC27 WILD-TYPE
  CLUS_1             1             101
  CLUS_2             0              36
  CLUS_3             2              68
  CLUS_4             0              95
D41V6, multiclass
        clus
vv       CDC27 MUTATED CDC27 WILD-TYPE
  CLUS_1             1             109
  CLUS_2             0             136
  CLUS_3             2              55
D41V7, multiclass
        clus
vv       CDC27 MUTATED CDC27 WILD-TYPE
  CLUS_1             1             104
  CLUS_2             2             114
  CLUS_3             0             101
D41V8, multiclass
        clus
vv       CDC27 MUTATED CDC27 WILD-TYPE
  CLUS_1             1              96
  CLUS_2             1             121
  CLUS_3             1             102
                     V1                      V2                      V3 
              "CN_CNMF"      "METHLYATION_CNMF"             "RPPA_CNMF" 
                     V4                      V5                      V6 
   "RPPA_CHIERARCHICAL"          "MRNASEQ_CNMF" "MRNASEQ_CHIERARCHICAL" 
                     V7                      V8 
          "MIRSEQ_CNMF"  "MIRSEQ_CHIERARCHICAL" 
> q(save="no")
