
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.84.4098/Clusters2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.84.4098/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/UCEC-TP/2667475/1.GDAC_mergedClustering.Finished/UCEC-TP.mergedcluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/UCEC-TP/2589075/1.GDAC_clinicalDataPicker.Finished/UCEC-TP.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ALL", "-oT=", "-nV=Nozzle.R1", "-OP=AGGREGRATED_CLUSTER", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"  "-oT="
[1] "opt"                     "-OP=AGGREGRATED_CLUSTER"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"                 "AGGREGRATED_CLUSTER"
[1] "dx" ""  

nPatients in clinical file=455, in cluster file=500, common to both=455
[1]  10 455
[1] "MRNA_CNMF"
[1] 3
 1  2  3  4 
13 19 14  8 
 1  2  3  4 
13 19 14  8 
[1] "MRNA_CHIERARCHICAL"
[1] 3
 1  2  3 
20 15 19 
 1  2  3 
20 15 19 
[1] "CN_CNMF"
[1] 3
  1   2   3   4   5 
275  38 112  16   6 
  1   2   3   4   5 
275  38 112  16   6 
[1] "METHLYATION_CNMF"
[1] 3
  1   2   3 
120  74 144 
  1   2   3 
120  74 144 
[1] "RPPA_CNMF"
[1] 3
 1  2  3  4  5  6 
41 38 41 16 38 26 
 1  2  3  4  5  6 
41 38 41 16 38 26 
[1] "RPPA_CHIERARCHICAL"
[1] 3
 1  2  3  4  5  6 
 7 33 39 39 56 26 
 1  2  3  4  5  6 
 7 33 39 39 56 26 
[1] "MRNASEQ_CNMF"
[1] 3
  1   2   3 
142 113 114 
  1   2   3 
142 113 114 
[1] "MRNASEQ_CHIERARCHICAL"
[1] 3
  1   2   3   4 
 65  98  65 141 
  1   2   3   4 
 65  98  65 141 
[1] "MIRSEQ_CNMF"
[1] 3
  1   2   3 
158 147 137 
  1   2   3 
158 147 137 
[1] "MIRSEQ_CHIERARCHICAL"
[1] 3
  1   2   3   4   5   6 
 51 119  74  20  35 143 
  1   2   3   4   5   6 
 51 119  74  20  35 143 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "VITALSTATUS"                           
 [5] "DCCUPLOADDATE"                         
 [6] "PRIMARYSITEOFDESEASE"                  
 [7] "GENDER"                                
 [8] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
 [9] "DAYSTOLASTKNOWNALIVE"                  
[10] "HISTOLOGICALTYPE"                      
[11] "TUMORGRADE"                            
[12] "RADIATIONS.RADIATION.REGIMENINDICATION"
[13] "COMPLETENESS.OF.RESECTION"             
[14] "BATCHNUMBER"                           

Input Data has 14 rows and 455 columns.

[1] "Batch" "14"   
[1] "Last Follow UP"
TCGA-A5-A0G1 TCGA-A5-A0G2 TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0G9 TCGA-A5-A0GA 
          NA         4053         1079          790         2165           NA 
TCGA-A5-A0GB TCGA-A5-A0GD TCGA-A5-A0GE TCGA-A5-A0GG TCGA-A5-A0GH TCGA-A5-A0GI 
         275           97         2717         2516         1671         1750 
TCGA-A5-A0GJ TCGA-A5-A0GM TCGA-A5-A0GN TCGA-A5-A0GP TCGA-A5-A0GQ TCGA-A5-A0GR 
        1447         1448         1477         1087         1167          780 
TCGA-A5-A0GU TCGA-A5-A0GV TCGA-A5-A0GW TCGA-A5-A0GX TCGA-A5-A0R6 TCGA-A5-A0R7 
         495          485          385          924          369           40 
TCGA-A5-A0R8 TCGA-A5-A0R9 TCGA-A5-A0RA TCGA-A5-A0VO TCGA-A5-A0VP TCGA-A5-A0VQ 
         125          294          555          128          927          177 
TCGA-A5-A1OF TCGA-A5-A1OG TCGA-A5-A1OJ TCGA-A5-A1OK TCGA-A5-A2K2 TCGA-A5-A2K3 
         241          348          292          243         2768         1409 
TCGA-A5-A2K4 TCGA-A5-A2K5 TCGA-A5-A2K7 TCGA-A5-A3LO TCGA-A5-A3LP TCGA-AJ-A23M 
          NA          161          156          223          230           31 
TCGA-AJ-A23O TCGA-AJ-A2QK TCGA-AJ-A2QL TCGA-AJ-A2QM TCGA-AJ-A2QN TCGA-AJ-A2QO 
          60           12           49           31           61           91 
TCGA-AJ-A3BD TCGA-AJ-A3BF TCGA-AJ-A3BG TCGA-AJ-A3BH TCGA-AJ-A3BI TCGA-AJ-A3BK 
          15           34           31           NA           61           51 
TCGA-AJ-A3EJ TCGA-AJ-A3EK TCGA-AJ-A3EL TCGA-AJ-A3EM TCGA-AJ-A3I9 TCGA-AJ-A3IA 
          NA           64           65           50           39           28 
TCGA-AJ-A3NC TCGA-AJ-A3NE TCGA-AJ-A3NF TCGA-AJ-A3NG TCGA-AJ-A3NH TCGA-AJ-A3OJ 
         210           78           41           52           NA           59 
TCGA-AJ-A3OK TCGA-AP-A051 TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A054 TCGA-AP-A056 
         142         2545           NA          181           NA         2026 
TCGA-AP-A059 TCGA-AP-A05A TCGA-AP-A05D TCGA-AP-A05H TCGA-AP-A05J TCGA-AP-A05N 
         250         1198         1364          831          639          239 
TCGA-AP-A05O TCGA-AP-A05P TCGA-AP-A0L8 TCGA-AP-A0L9 TCGA-AP-A0LD TCGA-AP-A0LE 
         371          260           NA         3443         2906         2986 
TCGA-AP-A0LF TCGA-AP-A0LG TCGA-AP-A0LH TCGA-AP-A0LI TCGA-AP-A0LJ TCGA-AP-A0LL 
         103         1921           NA         2602          965         2141 
TCGA-AP-A0LM TCGA-AP-A0LN TCGA-AP-A0LO TCGA-AP-A0LP TCGA-AP-A0LQ TCGA-AP-A0LS 
         825         1992           NA         1875         1906         1668 
TCGA-AP-A0LT TCGA-AP-A0LV TCGA-AP-A1DH TCGA-AP-A1DK TCGA-AP-A1DM TCGA-AP-A1DO 
        1185          385         1816         1650         1329          952 
TCGA-AP-A1DP TCGA-AP-A1DQ TCGA-AP-A1DR TCGA-AP-A1DV TCGA-AP-A1E0 TCGA-AP-A1E1 
          NA         1184         1131          204          691          317 
TCGA-AP-A1E3 TCGA-AP-A1E4 TCGA-AP-A3K1 TCGA-AW-A1PO TCGA-AX-A05S TCGA-AX-A05T 
         523          267          555           17           NA          603 
TCGA-AX-A05U TCGA-AX-A05W TCGA-AX-A05Y TCGA-AX-A05Z TCGA-AX-A060 TCGA-AX-A062 
         902         2078         2191         1413         1075         1398 
TCGA-AX-A063 TCGA-AX-A064 TCGA-AX-A06B TCGA-AX-A06D TCGA-AX-A06F TCGA-AX-A06H 
        2024         1064         1639           NA         1554          833 
TCGA-AX-A06J TCGA-AX-A06L TCGA-AX-A0IS TCGA-AX-A0IU TCGA-AX-A0IW TCGA-AX-A0IZ 
         913         1479         1065          868         1148         1333 
TCGA-AX-A0J0 TCGA-AX-A0J1 TCGA-AX-A1C4 TCGA-AX-A1C5 TCGA-AX-A1C7 TCGA-AX-A1C8 
        1219         2004          404          584          515          412 
TCGA-AX-A1C9 TCGA-AX-A1CA TCGA-AX-A1CC TCGA-AX-A1CE TCGA-AX-A1CF TCGA-AX-A1CI 
         464          617          378          610         2337         2207 
TCGA-AX-A1CJ TCGA-AX-A1CK TCGA-AX-A1CN TCGA-AX-A1CP TCGA-AX-A1CR TCGA-AX-A2H2 
        1645         2052          764         1107          337           NA 
TCGA-AX-A2H4 TCGA-AX-A2H5 TCGA-AX-A2H7 TCGA-AX-A2H8 TCGA-AX-A2HA TCGA-AX-A2HC 
          NA         2167         1020         1861         2090         1016 
TCGA-AX-A2HD TCGA-AX-A2HF TCGA-AX-A2HG TCGA-AX-A2HH TCGA-AX-A2HJ TCGA-AX-A2HK 
        1232          489          660          539          831           NA 
TCGA-AX-A2IN TCGA-AX-A2IO TCGA-AX-A3FS TCGA-AX-A3FT TCGA-AX-A3FW TCGA-AX-A3FX 
          NA         1176            7            3           10            4 
TCGA-AX-A3FZ TCGA-AX-A3G1 TCGA-AX-A3G3 TCGA-AX-A3G4 TCGA-AX-A3G6 TCGA-AX-A3G7 
           6           NA            1            4           NA            7 
TCGA-AX-A3G8 TCGA-AX-A3G9 TCGA-AX-A3GB TCGA-AX-A3GI TCGA-B5-A0JN TCGA-B5-A0JR 
          36          254          440            4         2068         1465 
TCGA-B5-A0JS TCGA-B5-A0JT TCGA-B5-A0JU TCGA-B5-A0JV TCGA-B5-A0JX TCGA-B5-A0JY 
        1241         1312         1483         1125         1360          821 
TCGA-B5-A0JZ TCGA-B5-A0K0 TCGA-B5-A0K1 TCGA-B5-A0K2 TCGA-B5-A0K3 TCGA-B5-A0K4 
         689          679          746          682          700          466 
TCGA-B5-A0K6 TCGA-B5-A0K7 TCGA-B5-A0K8 TCGA-B5-A0K9 TCGA-B5-A0KB TCGA-B5-A11E 
         426          372          542          166          124          265 
TCGA-B5-A11F TCGA-B5-A11G TCGA-B5-A11H TCGA-B5-A11I TCGA-B5-A11J TCGA-B5-A11L 
        5279         3076         2317         2038         1291         1396 
TCGA-B5-A11M TCGA-B5-A11N TCGA-B5-A11O TCGA-B5-A11P TCGA-B5-A11Q TCGA-B5-A11R 
        1117         1147         1034         1120          702          837 
TCGA-B5-A11S TCGA-B5-A11U TCGA-B5-A11V TCGA-B5-A11W TCGA-B5-A11X TCGA-B5-A11Y 
         650          271          231          339          337          315 
TCGA-B5-A11Z TCGA-B5-A121 TCGA-B5-A1MR TCGA-B5-A1MU TCGA-B5-A1MV TCGA-B5-A1MW 
         291          259         5690           NA          380          220 
TCGA-B5-A1MX TCGA-B5-A1MY TCGA-B5-A1MZ TCGA-B5-A1N2 TCGA-B5-A3FC TCGA-BG-A0LW 
         174           NA          465          389         1890          194 
TCGA-BG-A0LX TCGA-BG-A0M0 TCGA-BG-A0M2 TCGA-BG-A0M3 TCGA-BG-A0M4 TCGA-BG-A0M6 
         252          237          316          742          480          241 
TCGA-BG-A0M7 TCGA-BG-A0M8 TCGA-BG-A0M9 TCGA-BG-A0MA TCGA-BG-A0MC TCGA-BG-A0MG 
         698          690          765           NA          827          896 
TCGA-BG-A0MH TCGA-BG-A0MI TCGA-BG-A0MO TCGA-BG-A0MQ TCGA-BG-A0MS TCGA-BG-A0MT 
        1341           NA         1021          761          553          240 
TCGA-BG-A0MU TCGA-BG-A0RY TCGA-BG-A0VT TCGA-BG-A0VV TCGA-BG-A0VW TCGA-BG-A0VX 
         231          128          224          260          131          490 
TCGA-BG-A0VZ TCGA-BG-A0W1 TCGA-BG-A0W2 TCGA-BG-A0YU TCGA-BG-A0YV TCGA-BG-A186 
         868          907         1151          279          186          230 
TCGA-BG-A187 TCGA-BG-A18A TCGA-BG-A18B TCGA-BG-A18C TCGA-BG-A220 TCGA-BG-A221 
         231          252          155          169          220           46 
TCGA-BG-A222 TCGA-BG-A2AD TCGA-BG-A2AE TCGA-BG-A2L7 TCGA-BK-A0C9 TCGA-BK-A0CA 
          14           NA           16          177          289          371 
TCGA-BK-A0CB TCGA-BK-A0CC TCGA-BK-A139 TCGA-BK-A13B TCGA-BK-A13C TCGA-BK-A26L 
         188          211          239          578          202          233 
TCGA-BS-A0T9 TCGA-BS-A0TA TCGA-BS-A0TC TCGA-BS-A0TD TCGA-BS-A0TE TCGA-BS-A0TG 
          NA          714         2260         2002           NA         2034 
TCGA-BS-A0TI TCGA-BS-A0TJ TCGA-BS-A0U5 TCGA-BS-A0U7 TCGA-BS-A0U8 TCGA-BS-A0U9 
        1443         1514         2204           NA         2606         1749 
TCGA-BS-A0UA TCGA-BS-A0UF TCGA-BS-A0UJ TCGA-BS-A0UL TCGA-BS-A0UM TCGA-BS-A0UT 
        2540         1843           27           36         2191          595 
TCGA-BS-A0UV TCGA-BS-A0V4 TCGA-BS-A0V6 TCGA-BS-A0V7 TCGA-BS-A0V8 TCGA-BS-A0VI 
         149           31         1650         1429         1507         1661 
TCGA-BS-A0WQ TCGA-D1-A0ZN TCGA-D1-A0ZO TCGA-D1-A0ZP TCGA-D1-A0ZQ TCGA-D1-A0ZR 
        1207          512           69          690            8           17 
TCGA-D1-A0ZS TCGA-D1-A0ZU TCGA-D1-A0ZV TCGA-D1-A0ZZ TCGA-D1-A101 TCGA-D1-A102 
         147          578          350          377           53           43 
TCGA-D1-A103 TCGA-D1-A15V TCGA-D1-A15W TCGA-D1-A15X TCGA-D1-A15Z TCGA-D1-A160 
         480         1012          915          909           NA          112 
TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A163 TCGA-D1-A165 TCGA-D1-A167 TCGA-D1-A168 
         892          976          938           20          478          913 
TCGA-D1-A169 TCGA-D1-A16B TCGA-D1-A16D TCGA-D1-A16E TCGA-D1-A16F TCGA-D1-A16G 
         905          744          908          909           80           NA 
TCGA-D1-A16I TCGA-D1-A16J TCGA-D1-A16N TCGA-D1-A16O TCGA-D1-A16Q TCGA-D1-A16R 
          NA          742          640          864          221           21 
TCGA-D1-A16S TCGA-D1-A16V TCGA-D1-A16X TCGA-D1-A16Y TCGA-D1-A174 TCGA-D1-A175 
         238           43          111          532          324          202 
TCGA-D1-A176 TCGA-D1-A177 TCGA-D1-A179 TCGA-D1-A17A TCGA-D1-A17B TCGA-D1-A17C 
         506          347          206           19          212            1 
TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17H TCGA-D1-A17K TCGA-D1-A17L TCGA-D1-A17M 
         160           39          454          429          459          311 
TCGA-D1-A17N TCGA-D1-A17Q TCGA-D1-A17R TCGA-D1-A17S TCGA-D1-A17T TCGA-D1-A17U 
          46           54           NA          326           70          396 
TCGA-D1-A1NS TCGA-D1-A1NU TCGA-D1-A1NW TCGA-D1-A1NX TCGA-D1-A1NY TCGA-D1-A1NZ 
          43          311           22          399          396            8 
TCGA-D1-A1O0 TCGA-D1-A1O5 TCGA-D1-A1O7 TCGA-D1-A1O8 TCGA-D1-A2G0 TCGA-D1-A2G5 
           2          377           32           NA          107         1260 
TCGA-D1-A2G6 TCGA-D1-A2G7 TCGA-D1-A3DA TCGA-D1-A3DG TCGA-D1-A3DH TCGA-DI-A0WH 
          NA         1365            8           NA          125          405 
TCGA-DI-A1BU TCGA-DI-A1BY TCGA-DI-A1C3 TCGA-DI-A1NN TCGA-DI-A1NO TCGA-DI-A2QT 
        1005         1114          739          943           NA           NA 
TCGA-DI-A2QU TCGA-DI-A2QY TCGA-E6-A1LX TCGA-E6-A1LZ TCGA-E6-A1M0 TCGA-E6-A2P8 
          NA         2797          711         1289          427           NA 
TCGA-E6-A2P9 TCGA-EC-A1NJ TCGA-EC-A1QX TCGA-EC-A24G TCGA-EO-A1Y5 TCGA-EO-A1Y7 
         202           NA           66           46          332          243 
TCGA-EO-A1Y8 TCGA-EO-A22R TCGA-EO-A22S TCGA-EO-A22T TCGA-EO-A22U TCGA-EO-A22X 
         328          972         1066         1004          825          981 
TCGA-EO-A22Y TCGA-EO-A2CG TCGA-EO-A2CH TCGA-EO-A3AS TCGA-EO-A3AU TCGA-EO-A3AY 
         761          672           NA         1046          589          392 
TCGA-EY-A1G7 TCGA-EY-A1G8 TCGA-EY-A1GC TCGA-EY-A1GD TCGA-EY-A1GE TCGA-EY-A1GF 
          NA           NA          138          248          552          532 
TCGA-EY-A1GH TCGA-EY-A1GI TCGA-EY-A1GJ TCGA-EY-A1GK TCGA-EY-A1GL TCGA-EY-A1GM 
         527          506          510          503          424          209 
TCGA-EY-A1GO TCGA-EY-A1GP TCGA-EY-A1GQ TCGA-EY-A1GR TCGA-EY-A1GS TCGA-EY-A1GT 
         360          348          340          344          284          300 
TCGA-EY-A1GU TCGA-EY-A1GV TCGA-EY-A1GW TCGA-EY-A1GX TCGA-EY-A1H0 TCGA-EY-A210 
         259          257          260          166          339          165 
TCGA-EY-A212 TCGA-EY-A214 TCGA-EY-A215 TCGA-EY-A2OM TCGA-EY-A2ON TCGA-EY-A2OO 
         109          252          391          235          171          774 
TCGA-EY-A2OP TCGA-EY-A2OQ TCGA-FI-A2CX TCGA-FI-A2CY TCGA-FI-A2D0 TCGA-FI-A2D2 
         503          293         1217         1064         1034         1095 
TCGA-FI-A2D4 TCGA-FI-A2D5 TCGA-FI-A2D6 TCGA-FI-A2EU TCGA-FI-A2EW TCGA-FI-A2EX 
          NA           NA          273         2557         1795          276 
TCGA-FI-A2EY TCGA-FI-A2F4 TCGA-FI-A2F8 TCGA-FI-A2F9 TCGA-H5-A2HR 
          NA          880          761          791           53 
Variable 1:'AGE':	nDistinctValues=59,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=40,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=347,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=16,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=17,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 10:'HISTOLOGICAL.TYPE':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'TUMOR.GRADE':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 13:'COMPLETENESS.OF.RESECTION':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 14:'BATCH.NUMBER':	nDistinctValues=25,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                                   
[2] "HISTOLOGICAL.TYPE"                     
[3] "TUMOR.GRADE"                           
[4] "RADIATIONS.RADIATION.REGIMENINDICATION"
[5] "COMPLETENESS.OF.RESECTION"             
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE" "3"           
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 455 columns, 1 survival variables, and 4 non-survival variables.
AGE, nv=59, binary=FALSE, numeric=TRUE
HISTOLOGICAL.TYPE, nv=3, binary=FALSE, numeric=FALSE
RADIATIONS.RADIATION.REGIMENINDICATION, nv=2, binary=FALSE, numeric=FALSE
COMPLETENESS.OF.RESECTION, nv=4, binary=FALSE, numeric=FALSE

Clustering(1) Variable = MRNA_CNMF
D1V1, survival
          sevent
clus2       0  1
  subtype1 11  2
  subtype2 16  3
  subtype3 13  1
  subtype4  7  1
subtype1 subtype2 subtype3 subtype4 
      13       19       14        8 
subtype1 subtype2 subtype3 subtype4 
       2        3        1        1 
$subtype1
TCGA-A5-A0G2 TCGA-A5-A0GA TCGA-A5-A0GB TCGA-AP-A051 TCGA-AP-A0LT TCGA-AX-A05S 
      133.25        17.85         9.04        83.67        38.96        13.58 
TCGA-AX-A05Z TCGA-AX-A060 TCGA-AX-A063 TCGA-AX-A064 TCGA-AX-A06F TCGA-B5-A0JR 
       46.45        35.34        66.54        34.98        51.09        48.16 
TCGA-B5-A0JZ 
       22.65 

$subtype2
TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0GH TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A054 
       35.47        25.97        54.94        21.99         5.95        23.31 
TCGA-AP-A056 TCGA-AP-A05A TCGA-AP-A05D TCGA-AP-A05H TCGA-AP-A05J TCGA-AP-A0L8 
       66.61        39.39        44.84        27.32        21.01        48.79 
TCGA-AP-A0L9 TCGA-AP-A0LD TCGA-AX-A06B TCGA-AX-A0IW TCGA-AX-A0J1 TCGA-B5-A0K4 
      113.19        95.54        53.88        37.74        65.88        15.32 
TCGA-BK-A0CC 
        6.94 

$subtype3
TCGA-A5-A0GE TCGA-A5-A0GM TCGA-A5-A0GP TCGA-A5-A0GU TCGA-AP-A05P TCGA-AP-A0LH 
       89.33        47.61        35.74        16.27         8.55        36.36 
TCGA-AP-A0LJ TCGA-AX-A05T TCGA-AX-A05U TCGA-AX-A05W TCGA-AX-A05Y TCGA-AX-A06J 
       31.73        19.82        29.65        68.32        72.03        30.02 
TCGA-B5-A0K1 TCGA-BK-A0C9 
       24.53         9.50 

$subtype4
TCGA-AP-A05N TCGA-AP-A0LG TCGA-AP-A0LN TCGA-AP-A0LV TCGA-AX-A062 TCGA-B5-A0K0 
        7.86        63.16        65.49        12.66        45.96        22.32 
TCGA-BG-A0LW TCGA-BG-A0MI 
        6.38        23.47 

subtype1 subtype2 subtype3 subtype4 
    9.04     5.95     8.55     6.38 
subtype1 subtype2 subtype3 subtype4 
  133.25   113.19    89.33    65.49 
subtype1 subtype2 subtype3 subtype4 
  38.960   37.740   30.875   22.895 
[1] "9.0 - 133.2 (39.0)" "6.0 - 113.2 (37.7)" "8.6 - 89.3 (30.9)" 
[4] "6.4 - 65.5 (22.9)" 
 [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [7] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[13] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[19] "subtype2" "subtype4" "subtype3" "subtype2" "subtype2" "subtype2"
[25] "subtype4" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[37] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
[43] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype4"
[49] "subtype3" "subtype2" "subtype4" "subtype4" "subtype3" "subtype2"
 [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [7] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[13] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[19] "subtype2" "subtype4" "subtype3" "subtype2" "subtype2" "subtype2"
[25] "subtype4" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[37] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
[43] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype4"
[49] "subtype3" "subtype2" "subtype4" "subtype4" "subtype3" "subtype2"
 [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [7] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[13] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[19] "subtype2" "subtype4" "subtype3" "subtype2" "subtype2" "subtype2"
[25] "subtype4" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[37] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
[43] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype4"
[49] "subtype3" "subtype2" "subtype4" "subtype4" "subtype3" "subtype2"
D1V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      12
  subtype2                                       8
  subtype3                                      13
  subtype4                                       8
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             0                                 1
  subtype2                             0                                11
  subtype3                             1                                 0
  subtype4                             0                                 0
D1V3, multiclass
D1V4, binary
          cls
clus        0  1
  subtype1  7  6
  subtype2 13  6
  subtype3  3 11
  subtype4  2  6
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    7    6
  subtype2   13    6
  subtype3    3   11
  subtype4    2    6
     clus
vv    subtype1 subtype2 subtype3 subtype4
  NO         7       13        3        2
  YES        6        6       11        6
          vv
clus       R0 R1 R2 RX
  subtype1  7  2  1  0
  subtype2 15  1  1  1
  subtype3 11  2  0  0
  subtype4  6  1  0  0
D1V5, multiclass

Clustering(2) Variable = MRNA_CHIERARCHICAL
D2V1, survival
          sevent
clus2       0  1
  subtype1 18  2
  subtype2 13  2
  subtype3 16  3
subtype1 subtype2 subtype3 
      20       15       19 
subtype1 subtype2 subtype3 
       2        2        3 
$subtype1
TCGA-A5-A0GE TCGA-A5-A0GM TCGA-A5-A0GU TCGA-AP-A05N TCGA-AP-A0LG TCGA-AP-A0LH 
       89.33        47.61        16.27         7.86        63.16        36.36 
TCGA-AP-A0LJ TCGA-AP-A0LN TCGA-AP-A0LV TCGA-AX-A05T TCGA-AX-A05U TCGA-AX-A05W 
       31.73        65.49        12.66        19.82        29.65        68.32 
TCGA-AX-A062 TCGA-AX-A064 TCGA-AX-A06J TCGA-B5-A0K0 TCGA-B5-A0K1 TCGA-BG-A0LW 
       45.96        34.98        30.02        22.32        24.53         6.38 
TCGA-BG-A0MI TCGA-BK-A0C9 
       23.47         9.50 

$subtype2
TCGA-A5-A0G2 TCGA-A5-A0G5 TCGA-A5-A0GA TCGA-A5-A0GB TCGA-A5-A0GP TCGA-AP-A051 
      133.25        25.97        17.85         9.04        35.74        83.67 
TCGA-AP-A056 TCGA-AP-A0LT TCGA-AX-A05S TCGA-AX-A05Z TCGA-AX-A060 TCGA-AX-A063 
       66.61        38.96        13.58        46.45        35.34        66.54 
TCGA-AX-A06F TCGA-B5-A0JR TCGA-B5-A0JZ 
       51.09        48.16        22.65 

$subtype3
TCGA-A5-A0G3 TCGA-A5-A0GH TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A054 TCGA-AP-A05A 
       35.47        54.94        21.99         5.95        23.31        39.39 
TCGA-AP-A05D TCGA-AP-A05H TCGA-AP-A05J TCGA-AP-A05P TCGA-AP-A0L8 TCGA-AP-A0L9 
       44.84        27.32        21.01         8.55        48.79       113.19 
TCGA-AP-A0LD TCGA-AX-A05Y TCGA-AX-A06B TCGA-AX-A0IW TCGA-AX-A0J1 TCGA-B5-A0K4 
       95.54        72.03        53.88        37.74        65.88        15.32 
TCGA-BK-A0CC 
        6.94 

subtype1 subtype2 subtype3 
    6.38     9.04     5.95 
subtype1 subtype2 subtype3 
   89.33   133.25   113.19 
subtype1 subtype2 subtype3 
  29.835   38.960   37.740 
[1] "6.4 - 89.3 (29.8)"  "9.0 - 133.2 (39.0)" "6.0 - 113.2 (37.7)"
 [1] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [7] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[13] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[19] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[31] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[37] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[43] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[49] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
 [1] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [7] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[13] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[19] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[31] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[37] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[43] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[49] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
 [1] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [7] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[13] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[19] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[31] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[37] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[43] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[49] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
D2V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      19
  subtype2                                      13
  subtype3                                       9
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             1                                 0
  subtype2                             0                                 2
  subtype3                             0                                10
D2V3, multiclass
D2V4, binary
          cls
clus        0  1
  subtype1  5 15
  subtype2  9  6
  subtype3 11  8
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    5   15
  subtype2    9    6
  subtype3   11    8
     clus
vv    subtype1 subtype2 subtype3
  NO         5        9       11
  YES       15        6        8
          vv
clus       R0 R1 R2 RX
  subtype1 14  3  0  0
  subtype2 10  2  1  0
  subtype3 15  1  1  1
D2V5, multiclass

Clustering(3) Variable = CN_CNMF
D3V1, survival
          sevent
clus2        0   1
  subtype1 254  18
  subtype2  34   4
  subtype3  95  15
  subtype4  12   4
  subtype5   6   0
subtype1 subtype2 subtype3 subtype4 subtype5 
     272       38      110       16        6 
subtype1 subtype2 subtype3 subtype4 subtype5 
      18        4       15        4        0 
$subtype1
TCGA-A5-A0G1 TCGA-A5-A0G9 TCGA-A5-A0GA TCGA-A5-A0GB TCGA-A5-A0GD TCGA-A5-A0GE 
      106.88        71.18        17.85         9.04         3.19        89.33 
TCGA-A5-A0GG TCGA-A5-A0GH TCGA-A5-A0GI TCGA-A5-A0GM TCGA-A5-A0GP TCGA-A5-A0GQ 
       82.72        54.94        57.53        47.61        35.74        38.37 
TCGA-A5-A0GU TCGA-A5-A0GW TCGA-A5-A0GX TCGA-A5-A0R8 TCGA-A5-A0R9 TCGA-A5-A0RA 
       16.27        12.66        30.38         4.11         9.67        18.25 
TCGA-A5-A0VP TCGA-A5-A0VQ TCGA-A5-A1OF TCGA-A5-A1OJ TCGA-A5-A1OK TCGA-A5-A2K5 
       30.48         5.82         7.92         9.60         7.99         5.29 
TCGA-A5-A2K7 TCGA-AJ-A23O TCGA-AJ-A2QL TCGA-AJ-A2QO TCGA-AJ-A3BG TCGA-AJ-A3BK 
        5.13         1.97         1.61         2.99         1.02         1.68 
TCGA-AJ-A3EK TCGA-AJ-A3EL TCGA-AJ-A3NC TCGA-AJ-A3NE TCGA-AJ-A3OJ TCGA-AJ-A3OK 
        2.10         2.14         6.90         2.56         1.94         4.67 
TCGA-AP-A051 TCGA-AP-A054 TCGA-AP-A056 TCGA-AP-A059 TCGA-AP-A05N TCGA-AP-A05O 
       83.67        23.31        66.61         8.22         7.86        12.20 
TCGA-AP-A05P TCGA-AP-A0LD TCGA-AP-A0LE TCGA-AP-A0LG TCGA-AP-A0LH TCGA-AP-A0LJ 
        8.55        95.54        98.17        63.16        36.36        31.73 
TCGA-AP-A0LL TCGA-AP-A0LM TCGA-AP-A0LN TCGA-AP-A0LP TCGA-AP-A0LQ TCGA-AP-A0LS 
       70.39        27.12        65.49        61.64        62.66        54.84 
TCGA-AP-A0LT TCGA-AP-A0LV TCGA-AP-A1DH TCGA-AP-A1DK TCGA-AP-A1DM TCGA-AP-A1DP 
       38.96        12.66        59.70        54.25        43.69        35.54 
TCGA-AP-A1DR TCGA-AP-A1DV TCGA-AP-A1E0 TCGA-AP-A1E1 TCGA-AP-A1E3 TCGA-AP-A1E4 
       37.18         6.71        22.72        10.42        17.19         8.78 
TCGA-AX-A05S TCGA-AX-A05T TCGA-AX-A05U TCGA-AX-A05Y TCGA-AX-A05Z TCGA-AX-A060 
       13.58        19.82        29.65        72.03        46.45        35.34 
TCGA-AX-A062 TCGA-AX-A063 TCGA-AX-A064 TCGA-AX-A06D TCGA-AX-A06F TCGA-AX-A06H 
       45.96        66.54        34.98        12.26        51.09        27.39 
TCGA-AX-A06J TCGA-AX-A06L TCGA-AX-A0IS TCGA-AX-A0IZ TCGA-AX-A0J0 TCGA-AX-A0J1 
       30.02        48.62        35.01        43.82        40.08        65.88 
TCGA-AX-A1C4 TCGA-AX-A1C5 TCGA-AX-A1C9 TCGA-AX-A1CC TCGA-AX-A1CE TCGA-AX-A1CI 
       13.28        19.20        15.25        12.43        20.05        72.56 
TCGA-AX-A1CJ TCGA-AX-A1CK TCGA-AX-A1CN TCGA-AX-A2HA TCGA-AX-A2HC TCGA-AX-A2HD 
       54.08        67.46        25.12        68.71        33.40        40.50 
TCGA-AX-A2HG TCGA-AX-A2HH TCGA-AX-A2HJ TCGA-AX-A2IN TCGA-AX-A3FS TCGA-AX-A3FT 
       21.70        17.72        27.32        31.10         0.23         0.10 
TCGA-AX-A3G8 TCGA-AX-A3G9 TCGA-AX-A3GB TCGA-B5-A0JR TCGA-B5-A0JS TCGA-B5-A0JU 
        1.18         8.35        14.47        48.16        40.80        48.76 
TCGA-B5-A0JV TCGA-B5-A0JX TCGA-B5-A0JY TCGA-B5-A0JZ TCGA-B5-A0K0 TCGA-B5-A0K1 
       36.99        44.71        26.99        22.65        22.32        24.53 
TCGA-B5-A0K2 TCGA-B5-A0K6 TCGA-B5-A0K7 TCGA-B5-A0K9 TCGA-B5-A11F TCGA-B5-A11G 
       22.42        14.01        12.23         5.46       173.56       101.13 
TCGA-B5-A11H TCGA-B5-A11J TCGA-B5-A11L TCGA-B5-A11N TCGA-B5-A11O TCGA-B5-A11Q 
       76.18        42.44        45.90        37.71        33.99        23.08 
TCGA-B5-A11U TCGA-B5-A11W TCGA-B5-A11Y TCGA-B5-A11Z TCGA-B5-A121 TCGA-B5-A1MR 
        8.91        11.15        10.36         9.57         8.52       187.07 
TCGA-B5-A1MV TCGA-B5-A1MW TCGA-B5-A1MX TCGA-B5-A1MZ TCGA-B5-A3FC TCGA-BG-A0LW 
       12.49         7.23         5.72        15.29        62.14         6.38 
TCGA-BG-A0LX TCGA-BG-A0M0 TCGA-BG-A0M3 TCGA-BG-A0M7 TCGA-BG-A0M9 TCGA-BG-A0MA 
        8.28         7.79        24.39        22.95        25.15        10.72 
TCGA-BG-A0MC TCGA-BG-A0MG TCGA-BG-A0MI TCGA-BG-A0MO TCGA-BG-A0MQ TCGA-BG-A0MU 
       27.19        29.46        23.47        33.57        25.02         7.59 
TCGA-BG-A0VV TCGA-BG-A0VW TCGA-BG-A0VX TCGA-BG-A0VZ TCGA-BG-A0W2 TCGA-BG-A0YU 
        8.55         4.31        16.11        28.54        37.84         9.17 
TCGA-BG-A186 TCGA-BG-A187 TCGA-BG-A18A TCGA-BG-A18B TCGA-BG-A220 TCGA-BG-A222 
        7.56         7.59         8.28         5.10         7.23         0.46 
TCGA-BG-A2L7 TCGA-BK-A0CA TCGA-BK-A0CB TCGA-BK-A13B TCGA-BK-A13C TCGA-BS-A0T9 
        5.82        12.20         6.18        19.00         6.64        46.95 
TCGA-BS-A0TA TCGA-BS-A0TC TCGA-BS-A0TD TCGA-BS-A0TG TCGA-BS-A0TJ TCGA-BS-A0U5 
       23.47        74.30        65.82        66.87        49.78        72.46 
TCGA-BS-A0U7 TCGA-BS-A0U8 TCGA-BS-A0UA TCGA-BS-A0UF TCGA-BS-A0UJ TCGA-BS-A0UL 
       30.71        85.68        83.51        60.59         0.89         1.18 
TCGA-BS-A0V4 TCGA-BS-A0V6 TCGA-BS-A0V7 TCGA-BS-A0VI TCGA-BS-A0WQ TCGA-D1-A0ZN 
        1.02        54.25        46.98        54.61        39.68        16.83 
TCGA-D1-A0ZO TCGA-D1-A0ZR TCGA-D1-A0ZS TCGA-D1-A0ZU TCGA-D1-A0ZV TCGA-D1-A101 
        2.27         0.56         4.83        19.00        11.51         1.74 
TCGA-D1-A103 TCGA-D1-A15W TCGA-D1-A15X TCGA-D1-A15Z TCGA-D1-A160 TCGA-D1-A161 
       15.78        30.08        29.88         1.91         3.68        29.33 
TCGA-D1-A163 TCGA-D1-A165 TCGA-D1-A167 TCGA-D1-A16B TCGA-D1-A16D TCGA-D1-A16E 
       30.84         0.66        15.72        24.46        29.85        29.88 
TCGA-D1-A16G TCGA-D1-A16J TCGA-D1-A16O TCGA-D1-A16Q TCGA-D1-A16R TCGA-D1-A16X 
       27.42        24.39        28.41         7.27         0.69         3.65 
TCGA-D1-A16Y TCGA-D1-A174 TCGA-D1-A175 TCGA-D1-A176 TCGA-D1-A177 TCGA-D1-A17A 
       17.49        10.65         6.64        16.64        11.41         0.62 
TCGA-D1-A17B TCGA-D1-A17C TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17H TCGA-D1-A17L 
        6.97         0.03         5.26         1.28        14.93        15.09 
TCGA-D1-A17M TCGA-D1-A17N TCGA-D1-A17Q TCGA-D1-A17S TCGA-D1-A17T TCGA-D1-A17U 
       10.22         1.51         1.78        10.72         2.30        13.02 
TCGA-D1-A1NS TCGA-D1-A1NY TCGA-D1-A1NZ TCGA-D1-A1O5 TCGA-D1-A1O7 TCGA-D1-A1O8 
        1.41        13.02         0.26        12.39         1.05         3.95 
TCGA-D1-A2G0 TCGA-D1-A3DA TCGA-DI-A0WH TCGA-DI-A1BU TCGA-DI-A1BY TCGA-DI-A1C3 
        3.52         0.26        13.32        33.04        36.62        24.30 
TCGA-E6-A1LX TCGA-E6-A1M0 TCGA-E6-A2P8 TCGA-E6-A2P9 TCGA-EC-A1QX TCGA-EC-A24G 
       23.38        14.04         2.37         6.64         2.17         1.51 
TCGA-EO-A22R TCGA-EO-A22S TCGA-EO-A22T TCGA-EO-A22U TCGA-EO-A22X TCGA-EO-A3AU 
       31.96        35.05        33.01        27.12        32.25        19.36 
TCGA-EO-A3AY TCGA-EY-A1G8 TCGA-EY-A1GD TCGA-EY-A1GE TCGA-EY-A1GF TCGA-EY-A1GI 
       12.89        14.96         8.15        18.15        17.49        16.64 
TCGA-EY-A1GK TCGA-EY-A1GL TCGA-EY-A1GT TCGA-EY-A1GU TCGA-EY-A1GV TCGA-EY-A1H0 
       16.54        13.94         9.86         8.52         8.45        11.15 
TCGA-EY-A215 TCGA-EY-A2OM TCGA-EY-A2OP TCGA-FI-A2CX TCGA-FI-A2D0 TCGA-FI-A2D5 
       12.85         7.73        16.54        40.01        33.99        14.01 
TCGA-FI-A2D6 TCGA-FI-A2F4 
        8.98        28.93 

$subtype2
TCGA-A5-A0G2 TCGA-A5-A0GN TCGA-A5-A0GV TCGA-A5-A0R7 TCGA-A5-A2K3 TCGA-A5-A3LO 
      133.25        48.56        15.95         1.32        46.32         7.33 
TCGA-AJ-A2QK TCGA-AJ-A2QN TCGA-AJ-A3BI TCGA-AJ-A3I9 TCGA-AP-A3K1 TCGA-AX-A05W 
        0.39         2.01         2.01         1.28        18.25        68.32 
TCGA-AX-A3FZ TCGA-B5-A0JT TCGA-B5-A11P TCGA-B5-A11V TCGA-B5-A1MU TCGA-BG-A0M2 
        0.20        43.13        36.82         7.59        50.86        10.39 
TCGA-BG-A0MS TCGA-BG-A0RY TCGA-BG-A0VT TCGA-BG-A18C TCGA-BG-A221 TCGA-BG-A2AE 
       18.18         4.21         7.36         5.56         1.51         0.53 
TCGA-BS-A0TE TCGA-BS-A0TI TCGA-BS-A0UT TCGA-D1-A102 TCGA-D1-A169 TCGA-D1-A16V 
        4.80        47.44        19.56         1.41        29.75         1.41 
TCGA-D1-A17R TCGA-D1-A2G5 TCGA-EO-A1Y7 TCGA-EY-A1G7 TCGA-EY-A1GH TCGA-EY-A1GP 
       13.15        41.42         7.99         6.21        17.33        11.44 
TCGA-EY-A1GW TCGA-EY-A1GX 
        8.55         5.46 

$subtype3
TCGA-A5-A0G5 TCGA-A5-A0GJ TCGA-A5-A0GR TCGA-A5-A0R6 TCGA-A5-A1OG TCGA-A5-A2K2 
       25.97        47.57        25.64        12.13        11.44        91.00 
TCGA-A5-A2K4 TCGA-A5-A3LP TCGA-AJ-A23M TCGA-AJ-A2QM TCGA-AJ-A3BD TCGA-AJ-A3BF 
       28.64         7.56         1.02         1.02         0.49         1.12 
TCGA-AJ-A3EJ TCGA-AJ-A3EM TCGA-AJ-A3IA TCGA-AJ-A3NF TCGA-AP-A052 TCGA-AP-A053 
        1.64         1.64         0.92         1.35        21.99         5.95 
TCGA-AP-A05A TCGA-AP-A05D TCGA-AP-A05H TCGA-AP-A05J TCGA-AP-A0L8 TCGA-AP-A0L9 
       39.39        44.84        27.32        21.01        48.79       113.19 
TCGA-AP-A0LF TCGA-AP-A0LI TCGA-AP-A1DQ TCGA-AW-A1PO TCGA-AX-A06B TCGA-AX-A0IU 
        3.39        85.55        38.93         0.56        53.88        28.54 
TCGA-AX-A0IW TCGA-AX-A1C7 TCGA-AX-A1C8 TCGA-AX-A1CA TCGA-AX-A1CF TCGA-AX-A1CP 
       37.74        16.93        13.55        20.28        76.83        36.39 
TCGA-AX-A1CR TCGA-AX-A2H2 TCGA-AX-A2H4 TCGA-AX-A2H5 TCGA-AX-A2H8 TCGA-AX-A2HF 
       11.08         4.77        30.08        71.24        61.18        16.08 
TCGA-AX-A2HK TCGA-AX-A2IO TCGA-AX-A3FW TCGA-AX-A3FX TCGA-AX-A3G1 TCGA-AX-A3G3 
        2.96        38.66         0.33         0.13        20.52         0.03 
TCGA-AX-A3G4 TCGA-AX-A3G7 TCGA-AX-A3GI TCGA-B5-A0JN TCGA-B5-A0K3 TCGA-B5-A0K8 
        0.13         0.23         0.13        67.99        23.01        17.82 
TCGA-B5-A0KB TCGA-B5-A11I TCGA-B5-A1MY TCGA-B5-A1N2 TCGA-BG-A0M6 TCGA-BG-A0M8 
        4.08        67.00        11.87        12.79         7.92        22.68 
TCGA-BG-A0YV TCGA-BK-A0CC TCGA-BK-A139 TCGA-BK-A26L TCGA-BS-A0U9 TCGA-BS-A0V8 
        6.12         6.94         7.86         7.66        57.50        49.55 
TCGA-D1-A0ZP TCGA-D1-A0ZZ TCGA-D1-A15V TCGA-D1-A16I TCGA-D1-A16N TCGA-D1-A16S 
       22.68        12.39        33.27        11.47        21.04         7.82 
TCGA-D1-A179 TCGA-D1-A17K TCGA-D1-A1NU TCGA-D1-A1NW TCGA-D1-A1NX TCGA-D1-A1O0 
        6.77        14.10        10.22         0.72        13.12         0.07 
TCGA-D1-A2G7 TCGA-D1-A3DG TCGA-D1-A3DH TCGA-DI-A1NN TCGA-DI-A1NO TCGA-DI-A2QU 
       44.88         4.27         4.11        31.00         9.37        31.10 
TCGA-DI-A2QY TCGA-E6-A1LZ TCGA-EO-A1Y5 TCGA-EO-A1Y8 TCGA-EO-A2CG TCGA-EO-A2CH 
       91.96        42.38        10.92        10.78        22.09        19.40 
TCGA-EO-A3AS TCGA-EY-A1GC TCGA-EY-A1GJ TCGA-EY-A1GM TCGA-EY-A1GR TCGA-EY-A1GS 
       34.39         4.54        16.77         6.87        11.31         9.34 
TCGA-EY-A210 TCGA-EY-A212 TCGA-EY-A214 TCGA-EY-A2ON TCGA-EY-A2OQ TCGA-FI-A2CY 
        5.42         3.58         8.28         5.62         9.63        34.98 
TCGA-FI-A2D2 TCGA-FI-A2EU TCGA-FI-A2EW TCGA-FI-A2EX TCGA-FI-A2EY TCGA-FI-A2F8 
       36.00        84.07        59.01         9.07        29.03        25.02 
TCGA-FI-A2F9 TCGA-H5-A2HR 
       26.01         1.74 

$subtype4
TCGA-AJ-A3NG TCGA-AP-A0LO TCGA-AX-A2H7 TCGA-B5-A0K4 TCGA-B5-A11E TCGA-B5-A11R 
        1.71        33.40        33.53        15.32         8.71        27.52 
TCGA-B5-A11S TCGA-BG-A0M4 TCGA-BK-A0C9 TCGA-BS-A0UV TCGA-D1-A168 TCGA-D1-A2G6 
       21.37        15.78         9.50         4.90        30.02         8.48 
TCGA-DI-A2QT TCGA-EO-A22Y TCGA-EY-A1GQ TCGA-FI-A2D4 
       12.39        25.02        11.18         7.96 

$subtype5
TCGA-AP-A1DO TCGA-BG-A0MT TCGA-BG-A0W1 TCGA-D1-A0ZQ TCGA-EY-A1GO TCGA-EY-A2OO 
       31.30         7.89        29.82         0.26        11.84        25.45 

subtype1 subtype2 subtype3 subtype4 subtype5 
    0.03     0.20     0.03     1.71     0.26 
subtype1 subtype2 subtype3 subtype4 subtype5 
  187.07   133.25   113.19    33.53    31.30 
subtype1 subtype2 subtype3 subtype4 subtype5 
  17.340    8.270   13.335   13.855   18.645 
[1] "0.0 - 187.1 (17.3)" "0.2 - 133.2 (8.3)"  "0.0 - 113.2 (13.3)"
[4] "1.7 - 33.5 (13.9)"  "0.3 - 31.3 (18.6)" 
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [13] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [19] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [31] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [37] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
 [43] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [49] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
 [55] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [61] "subtype4" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [67] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [73] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [79] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
 [85] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype5" "subtype1" "subtype3" "subtype1" "subtype1"
[103] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[109] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[115] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[121] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[127] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[133] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[139] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype4" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[157] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[163] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[169] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[175] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[181] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[187] "subtype4" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[193] "subtype4" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[199] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype4"
[205] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[223] "subtype1" "subtype2" "subtype1" "subtype4" "subtype3" "subtype1"
[229] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[235] "subtype1" "subtype1" "subtype2" "subtype5" "subtype1" "subtype2"
[241] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype5"
[247] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[253] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[259] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype3"
[265] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[271] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[277] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[283] "subtype1" "subtype2" "subtype4" "subtype1" "subtype1" "subtype1"
[289] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[295] "subtype5" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[301] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[307] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype4" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[319] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[337] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[343] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[355] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[361] "subtype4" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[367] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype4"
[373] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[379] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
[385] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype4"
[391] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[397] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype5"
[409] "subtype2" "subtype4" "subtype3" "subtype3" "subtype1" "subtype1"
[415] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[421] "subtype3" "subtype1" "subtype1" "subtype3" "subtype5" "subtype1"
[427] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype4"
[433] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[439] "subtype1" "subtype3" "subtype3" "subtype3"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [13] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [19] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [31] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [37] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
 [43] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [49] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
 [55] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [61] "subtype4" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [67] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [73] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [79] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
 [85] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype5" "subtype1" "subtype3" "subtype1" "subtype1"
[103] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[109] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[115] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[121] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[127] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[133] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[139] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype4" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[157] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[163] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[169] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[175] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[181] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[187] "subtype4" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[193] "subtype4" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[199] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype4"
[205] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[223] "subtype1" "subtype2" "subtype1" "subtype4" "subtype3" "subtype1"
[229] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[235] "subtype1" "subtype1" "subtype2" "subtype5" "subtype1" "subtype2"
[241] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype5"
[247] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[253] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[259] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype3"
[265] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[271] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[277] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[283] "subtype1" "subtype2" "subtype4" "subtype1" "subtype1" "subtype1"
[289] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[295] "subtype5" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[301] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[307] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype4" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[319] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[337] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[343] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[355] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[361] "subtype4" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[367] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype4"
[373] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[379] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
[385] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype4"
[391] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[397] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype5"
[409] "subtype2" "subtype4" "subtype3" "subtype3" "subtype1" "subtype1"
[415] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[421] "subtype3" "subtype1" "subtype1" "subtype3" "subtype5" "subtype1"
[427] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype4"
[433] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[439] "subtype1" "subtype3" "subtype3" "subtype3"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [13] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [19] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [31] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [37] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
 [43] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [49] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
 [55] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [61] "subtype4" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [67] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [73] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [79] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
 [85] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype5" "subtype1" "subtype3" "subtype1" "subtype1"
[103] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[109] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[115] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[121] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[127] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[133] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[139] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype4" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[157] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[163] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[169] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[175] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[181] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[187] "subtype4" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[193] "subtype4" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[199] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype4"
[205] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[223] "subtype1" "subtype2" "subtype1" "subtype4" "subtype3" "subtype1"
[229] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[235] "subtype1" "subtype1" "subtype2" "subtype5" "subtype1" "subtype2"
[241] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype5"
[247] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[253] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[259] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype3"
[265] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[271] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[277] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[283] "subtype1" "subtype2" "subtype4" "subtype1" "subtype1" "subtype1"
[289] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[295] "subtype5" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[301] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[307] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype4" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[319] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[337] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[343] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[355] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[361] "subtype4" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[367] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype4"
[373] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[379] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
[385] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype4"
[391] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[397] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype5"
[409] "subtype2" "subtype4" "subtype3" "subtype3" "subtype1" "subtype1"
[415] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[421] "subtype3" "subtype1" "subtype1" "subtype3" "subtype5" "subtype1"
[427] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype4"
[433] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[439] "subtype1" "subtype3" "subtype3" "subtype3"
D3V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                     262
  subtype2                                      34
  subtype3                                      35
  subtype4                                      14
  subtype5                                       5
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             8                                 5
  subtype2                             0                                 4
  subtype3                             8                                69
  subtype4                             1                                 1
  subtype5                             1                                 0
D3V3, multiclass
D3V4, binary
          cls
clus         0   1
  subtype1  94 181
  subtype2   6  32
  subtype3  27  85
  subtype4   4  12
  subtype5   2   4
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   94  181
  subtype2    6   32
  subtype3   27   85
  subtype4    4   12
  subtype5    2    4
          vv
clus        R0  R1  R2  RX
  subtype1 194  15   4  14
  subtype2  26   1   1   3
  subtype3  71   8   8   7
  subtype4  10   0   2   0
  subtype5   6   0   0   0
D3V5, multiclass

Clustering(4) Variable = METHLYATION_CNMF
D4V1, survival
          sevent
clus2        0   1
  subtype1  99  18
  subtype2  70   4
  subtype3 133   9
subtype1 subtype2 subtype3 
     117       74      142 
subtype1 subtype2 subtype3 
      18        4        9 
$subtype1
TCGA-A5-A0G1 TCGA-A5-A0GR TCGA-A5-A1OF TCGA-A5-A1OG TCGA-A5-A2K2 TCGA-A5-A2K3 
      106.88        25.64         7.92        11.44        91.00        46.32 
TCGA-A5-A2K4 TCGA-A5-A3LP TCGA-AJ-A23M TCGA-AJ-A2QM TCGA-AJ-A3BF TCGA-AJ-A3EJ 
       28.64         7.56         1.02         1.02         1.12         1.64 
TCGA-AJ-A3EL TCGA-AJ-A3EM TCGA-AJ-A3IA TCGA-AJ-A3NE TCGA-AJ-A3NF TCGA-AJ-A3OJ 
        2.14         1.64         0.92         2.56         1.35         1.94 
TCGA-AP-A059 TCGA-AP-A0LF TCGA-AP-A0LM TCGA-AP-A1DK TCGA-AP-A1E3 TCGA-AP-A1E4 
        8.22         3.39        27.12        54.25        17.19         8.78 
TCGA-AP-A3K1 TCGA-AX-A06D TCGA-AX-A0IZ TCGA-AX-A1C5 TCGA-AX-A1C7 TCGA-AX-A1C8 
       18.25        12.26        43.82        19.20        16.93        13.55 
TCGA-AX-A1CA TCGA-AX-A1CC TCGA-AX-A1CF TCGA-AX-A1CN TCGA-AX-A1CR TCGA-AX-A2H2 
       20.28        12.43        76.83        25.12        11.08         4.77 
TCGA-AX-A2H4 TCGA-AX-A2H5 TCGA-AX-A2H8 TCGA-AX-A2HF TCGA-AX-A2HG TCGA-AX-A2HK 
       30.08        71.24        61.18        16.08        21.70         2.96 
TCGA-AX-A2IN TCGA-AX-A3FT TCGA-AX-A3FZ TCGA-AX-A3G3 TCGA-AX-A3G7 TCGA-AX-A3G8 
       31.10         0.10         0.20         0.03         0.23         1.18 
TCGA-AX-A3GI TCGA-B5-A0K8 TCGA-B5-A0KB TCGA-B5-A11I TCGA-B5-A11O TCGA-B5-A11X 
        0.13        17.82         4.08        67.00        33.99        11.08 
TCGA-B5-A1MR TCGA-B5-A1MU TCGA-B5-A1MY TCGA-B5-A1N2 TCGA-BG-A0YV TCGA-BG-A18C 
      187.07        50.86        11.87        12.79         6.12         5.56 
TCGA-BG-A220 TCGA-BG-A221 TCGA-BG-A2AE TCGA-BK-A139 TCGA-BK-A26L TCGA-BS-A0U9 
        7.23         1.51         0.53         7.86         7.66        57.50 
TCGA-BS-A0V8 TCGA-D1-A0ZP TCGA-D1-A0ZS TCGA-D1-A15V TCGA-D1-A15X TCGA-D1-A168 
       49.55        22.68         4.83        33.27        29.88        30.02 
TCGA-D1-A16G TCGA-D1-A16I TCGA-D1-A16J TCGA-D1-A16S TCGA-D1-A179 TCGA-D1-A17K 
       27.42        11.47        24.39         7.82         6.77        14.10 
TCGA-D1-A1NU TCGA-D1-A1NW TCGA-D1-A1NX TCGA-D1-A1O8 TCGA-D1-A2G0 TCGA-D1-A3DH 
       10.22         0.72        13.12         3.95         3.52         4.11 
TCGA-DI-A1BU TCGA-DI-A1NN TCGA-DI-A1NO TCGA-DI-A2QT TCGA-E6-A1LZ TCGA-E6-A2P8 
       33.04        31.00         9.37        12.39        42.38         2.37 
TCGA-EC-A1QX TCGA-EO-A1Y5 TCGA-EO-A1Y8 TCGA-EO-A22T TCGA-EO-A22X TCGA-EY-A1G7 
        2.17        10.92        10.78        33.01        32.25         6.21 
TCGA-EY-A1GC TCGA-EY-A1GJ TCGA-EY-A1GM TCGA-EY-A1GO TCGA-EY-A1GP TCGA-EY-A1GS 
        4.54        16.77         6.87        11.84        11.44         9.34 
TCGA-EY-A1GV TCGA-EY-A212 TCGA-EY-A214 TCGA-EY-A2ON TCGA-EY-A2OO TCGA-FI-A2CX 
        8.45         3.58         8.28         5.62        25.45        40.01 
TCGA-FI-A2CY TCGA-FI-A2D2 TCGA-FI-A2D6 TCGA-FI-A2EU TCGA-FI-A2EW TCGA-FI-A2EX 
       34.98        36.00         8.98        84.07        59.01         9.07 
TCGA-FI-A2EY TCGA-FI-A2F8 TCGA-H5-A2HR 
       29.03        25.02         1.74 

$subtype2
TCGA-A5-A0GG TCGA-A5-A0GQ TCGA-A5-A1OJ TCGA-A5-A1OK TCGA-A5-A3LO TCGA-AJ-A2QK 
       82.72        38.37         9.60         7.99         7.33         0.39 
TCGA-AJ-A3BD TCGA-AJ-A3OK TCGA-AP-A1DQ TCGA-AW-A1PO TCGA-AX-A06L TCGA-AX-A0J0 
        0.49         4.67        38.93         0.56        48.62        40.08 
TCGA-AX-A1C9 TCGA-AX-A1CJ TCGA-AX-A1CP TCGA-AX-A2H7 TCGA-AX-A2HH TCGA-AX-A2IO 
       15.25        54.08        36.39        33.53        17.72        38.66 
TCGA-AX-A3G4 TCGA-B5-A11M TCGA-B5-A11P TCGA-B5-A11R TCGA-B5-A11S TCGA-B5-A11U 
        0.13        36.72        36.82        27.52        21.37         8.91 
TCGA-B5-A11Y TCGA-B5-A121 TCGA-BG-A0VV TCGA-BG-A0VX TCGA-BG-A0W1 TCGA-BG-A0W2 
       10.36         8.52         8.55        16.11        29.82        37.84 
TCGA-BG-A0YU TCGA-BG-A186 TCGA-BG-A18A TCGA-BK-A0CA TCGA-BS-A0T9 TCGA-BS-A0UL 
        9.17         7.56         8.28        12.20        46.95         1.18 
TCGA-BS-A0V7 TCGA-BS-A0WQ TCGA-D1-A0ZR TCGA-D1-A0ZV TCGA-D1-A0ZZ TCGA-D1-A15W 
       46.98        39.68         0.56        11.51        12.39        30.08 
TCGA-D1-A162 TCGA-D1-A165 TCGA-D1-A16B TCGA-D1-A16D TCGA-D1-A16E TCGA-D1-A16O 
       32.09         0.66        24.46        29.85        29.88        28.41 
TCGA-D1-A16Q TCGA-D1-A16R TCGA-D1-A16X TCGA-D1-A16Y TCGA-D1-A17B TCGA-D1-A17C 
        7.27         0.69         3.65        17.49         6.97         0.03 
TCGA-D1-A17L TCGA-D1-A17N TCGA-D1-A17S TCGA-D1-A1O5 TCGA-D1-A2G7 TCGA-D1-A3DG 
       15.09         1.51        10.72        12.39        44.88         4.27 
TCGA-DI-A0WH TCGA-DI-A1BY TCGA-DI-A1C3 TCGA-DI-A2QU TCGA-DI-A2QY TCGA-EO-A2CG 
       13.32        36.62        24.30        31.10        91.96        22.09 
TCGA-EO-A2CH TCGA-EO-A3AS TCGA-EY-A1GE TCGA-EY-A1GR TCGA-EY-A210 TCGA-EY-A2OQ 
       19.40        34.39        18.15        11.31         5.42         9.63 
TCGA-FI-A2D0 TCGA-FI-A2F9 
       33.99        26.01 

$subtype3
TCGA-A5-A0VO TCGA-A5-A2K5 TCGA-A5-A2K7 TCGA-AJ-A23O TCGA-AJ-A2QL TCGA-AJ-A2QN 
        4.21         5.29         5.13         1.97         1.61         2.01 
TCGA-AJ-A2QO TCGA-AJ-A3BG TCGA-AJ-A3BI TCGA-AJ-A3BK TCGA-AJ-A3EK TCGA-AJ-A3I9 
        2.99         1.02         2.01         1.68         2.10         1.28 
TCGA-AJ-A3NC TCGA-AJ-A3NG TCGA-AP-A05O TCGA-AP-A0LS TCGA-AP-A1DH TCGA-AP-A1DM 
        6.90         1.71        12.20        54.84        59.70        43.69 
TCGA-AP-A1DO TCGA-AP-A1DP TCGA-AP-A1DR TCGA-AP-A1DV TCGA-AP-A1E0 TCGA-AP-A1E1 
       31.30        35.54        37.18         6.71        22.72        10.42 
TCGA-AX-A06H TCGA-AX-A0IS TCGA-AX-A1C4 TCGA-AX-A1CE TCGA-AX-A1CI TCGA-AX-A1CK 
       27.39        35.01        13.28        20.05        72.56        67.46 
TCGA-AX-A2HA TCGA-AX-A2HC TCGA-AX-A2HD TCGA-AX-A2HJ TCGA-AX-A3FS TCGA-AX-A3FW 
       68.71        33.40        40.50        27.32         0.23         0.33 
TCGA-AX-A3FX TCGA-AX-A3G1 TCGA-AX-A3G9 TCGA-AX-A3GB TCGA-B5-A0JT TCGA-B5-A0JU 
        0.13        20.52         8.35        14.47        43.13        48.76 
TCGA-B5-A0JX TCGA-B5-A11E TCGA-B5-A11F TCGA-B5-A11G TCGA-B5-A11H TCGA-B5-A11J 
       44.71         8.71       173.56       101.13        76.18        42.44 
TCGA-B5-A11L TCGA-B5-A11N TCGA-B5-A11Q TCGA-B5-A11V TCGA-B5-A11W TCGA-B5-A11Z 
       45.90        37.71        23.08         7.59        11.15         9.57 
TCGA-B5-A1MV TCGA-B5-A1MW TCGA-B5-A1MX TCGA-B5-A1MZ TCGA-B5-A3FC TCGA-BG-A0MA 
       12.49         7.23         5.72        15.29        62.14        10.72 
TCGA-BG-A0MH TCGA-BG-A0VT TCGA-BG-A0VW TCGA-BG-A0VZ TCGA-BG-A187 TCGA-BG-A18B 
       44.09         7.36         4.31        28.54         7.59         5.10 
TCGA-BG-A222 TCGA-BG-A2L7 TCGA-BK-A13B TCGA-BK-A13C TCGA-BS-A0U5 TCGA-BS-A0UA 
        0.46         5.82        19.00         6.64        72.46        83.51 
TCGA-BS-A0V4 TCGA-BS-A0V6 TCGA-BS-A0VI TCGA-D1-A0ZN TCGA-D1-A0ZO TCGA-D1-A0ZQ 
        1.02        54.25        54.61        16.83         2.27         0.26 
TCGA-D1-A0ZU TCGA-D1-A101 TCGA-D1-A102 TCGA-D1-A103 TCGA-D1-A15Z TCGA-D1-A160 
       19.00         1.74         1.41        15.78         1.91         3.68 
TCGA-D1-A161 TCGA-D1-A163 TCGA-D1-A167 TCGA-D1-A169 TCGA-D1-A16F TCGA-D1-A16N 
       29.33        30.84        15.72        29.75         2.63        21.04 
TCGA-D1-A16V TCGA-D1-A174 TCGA-D1-A175 TCGA-D1-A176 TCGA-D1-A177 TCGA-D1-A17A 
        1.41        10.65         6.64        16.64        11.41         0.62 
TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17H TCGA-D1-A17M TCGA-D1-A17Q TCGA-D1-A17R 
        5.26         1.28        14.93        10.22         1.78        13.15 
TCGA-D1-A17T TCGA-D1-A17U TCGA-D1-A1NS TCGA-D1-A1NY TCGA-D1-A1NZ TCGA-D1-A1O0 
        2.30        13.02         1.41        13.02         0.26         0.07 
TCGA-D1-A1O7 TCGA-D1-A2G5 TCGA-D1-A2G6 TCGA-D1-A3DA TCGA-E6-A1LX TCGA-E6-A1M0 
        1.05        41.42         8.48         0.26        23.38        14.04 
TCGA-E6-A2P9 TCGA-EC-A24G TCGA-EO-A1Y7 TCGA-EO-A22R TCGA-EO-A22S TCGA-EO-A22U 
        6.64         1.51         7.99        31.96        35.05        27.12 
TCGA-EO-A22Y TCGA-EO-A3AU TCGA-EO-A3AY TCGA-EY-A1G8 TCGA-EY-A1GD TCGA-EY-A1GF 
       25.02        19.36        12.89        14.96         8.15        17.49 
TCGA-EY-A1GH TCGA-EY-A1GI TCGA-EY-A1GK TCGA-EY-A1GL TCGA-EY-A1GQ TCGA-EY-A1GT 
       17.33        16.64        16.54        13.94        11.18         9.86 
TCGA-EY-A1GU TCGA-EY-A1GW TCGA-EY-A1GX TCGA-EY-A1H0 TCGA-EY-A215 TCGA-EY-A2OM 
        8.52         8.55         5.46        11.15        12.85         7.73 
TCGA-EY-A2OP TCGA-FI-A2D4 TCGA-FI-A2D5 TCGA-FI-A2F4 
       16.54         7.96        14.01        28.93 

subtype1 subtype2 subtype3 
    0.03     0.03     0.07 
subtype1 subtype2 subtype3 
  187.07    91.96   173.56 
subtype1 subtype2 subtype3 
  11.440   16.800   12.345 
[1] "0.0 - 187.1 (11.4)" "0.0 - 92.0 (16.8)"  "0.1 - 173.6 (12.3)"
  [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
  [7] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [19] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
 [25] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
 [31] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
 [37] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
 [43] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
 [49] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
 [55] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [61] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
 [67] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [73] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [79] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [85] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [91] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [97] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[109] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[121] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[133] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[151] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[157] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[163] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[169] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[181] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[187] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[193] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[199] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[205] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[211] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[217] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[223] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[235] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[241] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[253] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[259] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[271] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[277] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[283] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[289] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[295] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[301] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[313] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[319] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[325] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[331] "subtype1" "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
  [7] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [19] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
 [25] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
 [31] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
 [37] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
 [43] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
 [49] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
 [55] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [61] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
 [67] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [73] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [79] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [85] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [91] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [97] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[109] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[121] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[133] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[151] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[157] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[163] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[169] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[181] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[187] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[193] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[199] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[205] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[211] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[217] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[223] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[235] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[241] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[253] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[259] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[271] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[277] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[283] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[289] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[295] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[301] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[313] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[319] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[325] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[331] "subtype1" "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
  [7] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [19] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
 [25] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
 [31] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
 [37] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
 [43] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
 [49] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
 [55] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [61] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
 [67] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [73] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [79] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [85] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [91] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [97] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[109] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[121] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[133] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[151] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[157] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[163] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[169] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[181] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[187] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[193] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[199] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[205] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[211] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[217] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[223] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[235] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[241] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[253] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[259] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[271] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[277] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[283] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[289] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[295] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[301] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[313] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[319] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[325] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[331] "subtype1" "subtype2" "subtype1"
D4V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      55
  subtype2                                      61
  subtype3                                     142
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                            12                                53
  subtype2                             3                                10
  subtype3                             2                                 0
D4V3, multiclass
D4V4, binary
          cls
clus         0   1
  subtype1  32  88
  subtype2  12  62
  subtype3  37 107
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   32   88
  subtype2   12   62
  subtype3   37  107
     clus
vv    subtype1 subtype2 subtype3
  NO        32       12       37
  YES       88       62      107
          vv
clus        R0  R1  R2  RX
  subtype1  76   8   7   7
  subtype2  47   4   3  11
  subtype3 100   6   1   4
D4V5, multiclass

Clustering(5) Variable = RPPA_CNMF
D5V1, survival
          sevent
clus2       0  1
  subtype1 37  4
  subtype2 36  2
  subtype3 39  2
  subtype4 14  2
  subtype5 37  1
  subtype6 24  2
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      41       38       41       16       38       26 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
       4        2        2        2        1        2 
$subtype1
TCGA-A5-A0G1 TCGA-A5-A0GE TCGA-A5-A0GQ TCGA-A5-A0GR TCGA-A5-A0R8 TCGA-A5-A0RA 
      106.88        89.33        38.37        25.64         4.11        18.25 
TCGA-A5-A0VP TCGA-AP-A059 TCGA-AP-A05J TCGA-AP-A0LF TCGA-AP-A0LI TCGA-AP-A0LM 
       30.48         8.22        21.01         3.39        85.55        27.12 
TCGA-AX-A064 TCGA-AX-A06D TCGA-AX-A06L TCGA-B5-A0K2 TCGA-B5-A0K4 TCGA-B5-A11I 
       34.98        12.26        48.62        22.42        15.32        67.00 
TCGA-B5-A11U TCGA-B5-A11Y TCGA-BG-A0M0 TCGA-BG-A0M2 TCGA-BG-A0MG TCGA-BK-A0CA 
        8.91        10.36         7.79        10.39        29.46        12.20 
TCGA-BK-A0CC TCGA-BK-A139 TCGA-BS-A0T9 TCGA-BS-A0U9 TCGA-D1-A0ZR TCGA-D1-A101 
        6.94         7.86        46.95        57.50         0.56         1.74 
TCGA-D1-A15X TCGA-D1-A163 TCGA-D1-A16D TCGA-D1-A16E TCGA-D1-A16F TCGA-D1-A16G 
       29.88        30.84        29.85        29.88         2.63        27.42 
TCGA-D1-A16J TCGA-D1-A16X TCGA-D1-A17B TCGA-D1-A17D TCGA-D1-A17N 
       24.39         3.65         6.97         5.26         1.51 

$subtype2
TCGA-A5-A0G2 TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0GH TCGA-A5-A0GV TCGA-A5-A0GW 
      133.25        35.47        25.97        54.94        15.95        12.66 
TCGA-A5-A0R6 TCGA-A5-A0R7 TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A054 TCGA-AP-A056 
       12.13         1.32        21.99         5.95        23.31        66.61 
TCGA-AP-A05A TCGA-AP-A05D TCGA-AP-A0LD TCGA-AP-A0LE TCGA-AP-A0LT TCGA-AX-A05Z 
       39.39        44.84        95.54        98.17        38.96        46.45 
TCGA-AX-A06B TCGA-AX-A06F TCGA-AX-A0J0 TCGA-B5-A0JN TCGA-B5-A0JY TCGA-B5-A0K3 
       53.88        51.09        40.08        67.99        26.99        23.01 
TCGA-B5-A11E TCGA-B5-A11H TCGA-B5-A11X TCGA-BG-A0RY TCGA-BG-A0YV TCGA-BG-A18C 
        8.71        76.18        11.08         4.21         6.12         5.56 
TCGA-BS-A0TA TCGA-BS-A0TJ TCGA-D1-A168 TCGA-D1-A16N TCGA-D1-A16S TCGA-D1-A177 
       23.47        49.78        30.02        21.04         7.82        11.41 
TCGA-D1-A179 TCGA-D1-A17K 
        6.77        14.10 

$subtype3
TCGA-A5-A0G9 TCGA-A5-A0GB TCGA-A5-A0GJ TCGA-A5-A0GM TCGA-AX-A05W TCGA-AX-A063 
       71.18         9.04        47.57        47.61        68.32        66.54 
TCGA-AX-A06J TCGA-AX-A0J1 TCGA-B5-A0JZ TCGA-B5-A0K1 TCGA-B5-A11F TCGA-B5-A11N 
       30.02        65.88        22.65        24.53       173.56        37.71 
TCGA-B5-A11Q TCGA-B5-A11S TCGA-B5-A11W TCGA-BG-A0LX TCGA-BG-A0M7 TCGA-BG-A0M9 
       23.08        21.37        11.15         8.28        22.95        25.15 
TCGA-BG-A0MC TCGA-BG-A0MH TCGA-BG-A0MS TCGA-BG-A0MT TCGA-BG-A0W1 TCGA-BG-A0YU 
       27.19        44.09        18.18         7.89        29.82         9.17 
TCGA-BG-A186 TCGA-BG-A18A TCGA-BG-A18B TCGA-BK-A0CB TCGA-BK-A13C TCGA-BS-A0U7 
        7.56         8.28         5.10         6.18         6.64        30.71 
TCGA-BS-A0U8 TCGA-D1-A15W TCGA-D1-A160 TCGA-D1-A167 TCGA-D1-A16O TCGA-D1-A175 
       85.68        30.08         3.68        15.72        28.41         6.64 
TCGA-D1-A17H TCGA-D1-A17L TCGA-D1-A17M TCGA-D1-A17Q TCGA-D1-A17R 
       14.93        15.09        10.22         1.78        13.15 

$subtype4
TCGA-A5-A0GA TCGA-A5-A0GD TCGA-A5-A0GG TCGA-AP-A0LP TCGA-AX-A05S TCGA-AX-A05Y 
       17.85         3.19        82.72        61.64        13.58        72.03 
TCGA-AX-A060 TCGA-BG-A0M4 TCGA-BK-A0C9 TCGA-BS-A0TC TCGA-BS-A0TD TCGA-BS-A0TI 
       35.34        15.78         9.50        74.30        65.82        47.44 
TCGA-BS-A0UF TCGA-D1-A16V TCGA-D1-A16Y TCGA-D1-A176 
       60.59         1.41        17.49        16.64 

$subtype5
TCGA-A5-A0GI TCGA-A5-A0GN TCGA-A5-A0GU TCGA-A5-A0R9 TCGA-A5-A0VQ TCGA-AP-A051 
       57.53        48.56        16.27         9.67         5.82        83.67 
TCGA-AP-A05N TCGA-AP-A05O TCGA-AP-A05P TCGA-AP-A0LG TCGA-AP-A0LJ TCGA-AP-A0LL 
        7.86        12.20         8.55        63.16        31.73        70.39 
TCGA-AP-A0LN TCGA-AP-A0LV TCGA-AX-A05T TCGA-AX-A05U TCGA-AX-A062 TCGA-AX-A0IS 
       65.49        12.66        19.82        29.65        45.96        35.01 
TCGA-B5-A0K0 TCGA-B5-A0K7 TCGA-B5-A11G TCGA-B5-A11V TCGA-B5-A11Z TCGA-B5-A121 
       22.32        12.23       101.13         7.59         9.57         8.52 
TCGA-BG-A0M3 TCGA-BG-A0MU TCGA-BG-A0VT TCGA-BG-A0VV TCGA-BS-A0UJ TCGA-BS-A0V7 
       24.39         7.59         7.36         8.55         0.89        46.98 
TCGA-D1-A15Z TCGA-D1-A165 TCGA-D1-A16B TCGA-D1-A16Q TCGA-D1-A17C TCGA-D1-A17S 
        1.91         0.66        24.46         7.27         0.03        10.72 
TCGA-D1-A17T TCGA-DI-A0WH 
        2.30        13.32 

$subtype6
TCGA-A5-A0GX TCGA-A5-A0VO TCGA-AP-A05H TCGA-AP-A0LH TCGA-AX-A0IW TCGA-AX-A0IZ 
       30.38         4.21        27.32        36.36        37.74        43.82 
TCGA-B5-A0JT TCGA-B5-A0K9 TCGA-BG-A0LW TCGA-BG-A0M6 TCGA-BG-A0M8 TCGA-BG-A187 
       43.13         5.46         6.38         7.92        22.68         7.59 
TCGA-BS-A0TG TCGA-D1-A0ZP TCGA-D1-A0ZU TCGA-D1-A0ZZ TCGA-D1-A102 TCGA-D1-A103 
       66.87        22.68        19.00        12.39         1.41        15.78 
TCGA-D1-A15V TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A169 TCGA-D1-A16I TCGA-D1-A16R 
       33.27        29.33        32.09        29.75        11.47         0.69 
TCGA-D1-A17F TCGA-D1-A17U 
        1.28        13.02 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
    0.56     1.32     1.78     1.41     0.03     0.69 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  106.88   133.25   173.56    82.72   101.13    66.87 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  21.010   24.720   22.650   26.595   12.445   20.840 
[1] "0.6 - 106.9 (21.0)" "1.3 - 133.2 (24.7)" "1.8 - 173.6 (22.6)"
[4] "1.4 - 82.7 (26.6)"  "0.0 - 101.1 (12.4)" "0.7 - 66.9 (20.8)" 
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype4"
  [7] "subtype3" "subtype4" "subtype1" "subtype4" "subtype2" "subtype5"
 [13] "subtype3" "subtype3" "subtype5" "subtype1" "subtype1" "subtype5"
 [19] "subtype2" "subtype2" "subtype6" "subtype2" "subtype2" "subtype1"
 [25] "subtype5" "subtype1" "subtype6" "subtype1" "subtype5" "subtype5"
 [31] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [37] "subtype2" "subtype6" "subtype1" "subtype5" "subtype5" "subtype5"
 [43] "subtype2" "subtype2" "subtype1" "subtype5" "subtype6" "subtype1"
 [49] "subtype5" "subtype5" "subtype1" "subtype5" "subtype4" "subtype2"
 [55] "subtype5" "subtype4" "subtype5" "subtype5" "subtype3" "subtype4"
 [61] "subtype2" "subtype4" "subtype5" "subtype3" "subtype1" "subtype2"
 [67] "subtype1" "subtype2" "subtype3" "subtype1" "subtype5" "subtype6"
 [73] "subtype6" "subtype2" "subtype3" "subtype2" "subtype6" "subtype2"
 [79] "subtype3" "subtype5" "subtype3" "subtype1" "subtype2" "subtype1"
 [85] "subtype5" "subtype6" "subtype2" "subtype3" "subtype5" "subtype2"
 [91] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype5"
 [97] "subtype3" "subtype2" "subtype1" "subtype5" "subtype5" "subtype6"
[103] "subtype3" "subtype1" "subtype1" "subtype5" "subtype4" "subtype6"
[109] "subtype3" "subtype6" "subtype3" "subtype3" "subtype1" "subtype3"
[115] "subtype3" "subtype3" "subtype5" "subtype2" "subtype5" "subtype5"
[121] "subtype3" "subtype3" "subtype2" "subtype3" "subtype6" "subtype3"
[127] "subtype3" "subtype2" "subtype4" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype2" "subtype4" "subtype4"
[139] "subtype6" "subtype4" "subtype2" "subtype3" "subtype3" "subtype1"
[145] "subtype4" "subtype5" "subtype5" "subtype6" "subtype1" "subtype6"
[151] "subtype6" "subtype1" "subtype6" "subtype6" "subtype6" "subtype3"
[157] "subtype1" "subtype5" "subtype3" "subtype6" "subtype6" "subtype1"
[163] "subtype5" "subtype3" "subtype2" "subtype6" "subtype5" "subtype1"
[169] "subtype1" "subtype1" "subtype1" "subtype6" "subtype1" "subtype2"
[175] "subtype3" "subtype5" "subtype6" "subtype2" "subtype4" "subtype1"
[181] "subtype4" "subtype3" "subtype4" "subtype2" "subtype2" "subtype1"
[187] "subtype5" "subtype1" "subtype6" "subtype3" "subtype2" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype3" "subtype5" "subtype5"
[199] "subtype6" "subtype5"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype4"
  [7] "subtype3" "subtype4" "subtype1" "subtype4" "subtype2" "subtype5"
 [13] "subtype3" "subtype3" "subtype5" "subtype1" "subtype1" "subtype5"
 [19] "subtype2" "subtype2" "subtype6" "subtype2" "subtype2" "subtype1"
 [25] "subtype5" "subtype1" "subtype6" "subtype1" "subtype5" "subtype5"
 [31] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [37] "subtype2" "subtype6" "subtype1" "subtype5" "subtype5" "subtype5"
 [43] "subtype2" "subtype2" "subtype1" "subtype5" "subtype6" "subtype1"
 [49] "subtype5" "subtype5" "subtype1" "subtype5" "subtype4" "subtype2"
 [55] "subtype5" "subtype4" "subtype5" "subtype5" "subtype3" "subtype4"
 [61] "subtype2" "subtype4" "subtype5" "subtype3" "subtype1" "subtype2"
 [67] "subtype1" "subtype2" "subtype3" "subtype1" "subtype5" "subtype6"
 [73] "subtype6" "subtype2" "subtype3" "subtype2" "subtype6" "subtype2"
 [79] "subtype3" "subtype5" "subtype3" "subtype1" "subtype2" "subtype1"
 [85] "subtype5" "subtype6" "subtype2" "subtype3" "subtype5" "subtype2"
 [91] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype5"
 [97] "subtype3" "subtype2" "subtype1" "subtype5" "subtype5" "subtype6"
[103] "subtype3" "subtype1" "subtype1" "subtype5" "subtype4" "subtype6"
[109] "subtype3" "subtype6" "subtype3" "subtype3" "subtype1" "subtype3"
[115] "subtype3" "subtype3" "subtype5" "subtype2" "subtype5" "subtype5"
[121] "subtype3" "subtype3" "subtype2" "subtype3" "subtype6" "subtype3"
[127] "subtype3" "subtype2" "subtype4" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype2" "subtype4" "subtype4"
[139] "subtype6" "subtype4" "subtype2" "subtype3" "subtype3" "subtype1"
[145] "subtype4" "subtype5" "subtype5" "subtype6" "subtype1" "subtype6"
[151] "subtype6" "subtype1" "subtype6" "subtype6" "subtype6" "subtype3"
[157] "subtype1" "subtype5" "subtype3" "subtype6" "subtype6" "subtype1"
[163] "subtype5" "subtype3" "subtype2" "subtype6" "subtype5" "subtype1"
[169] "subtype1" "subtype1" "subtype1" "subtype6" "subtype1" "subtype2"
[175] "subtype3" "subtype5" "subtype6" "subtype2" "subtype4" "subtype1"
[181] "subtype4" "subtype3" "subtype4" "subtype2" "subtype2" "subtype1"
[187] "subtype5" "subtype1" "subtype6" "subtype3" "subtype2" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype3" "subtype5" "subtype5"
[199] "subtype6" "subtype5"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype4"
  [7] "subtype3" "subtype4" "subtype1" "subtype4" "subtype2" "subtype5"
 [13] "subtype3" "subtype3" "subtype5" "subtype1" "subtype1" "subtype5"
 [19] "subtype2" "subtype2" "subtype6" "subtype2" "subtype2" "subtype1"
 [25] "subtype5" "subtype1" "subtype6" "subtype1" "subtype5" "subtype5"
 [31] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [37] "subtype2" "subtype6" "subtype1" "subtype5" "subtype5" "subtype5"
 [43] "subtype2" "subtype2" "subtype1" "subtype5" "subtype6" "subtype1"
 [49] "subtype5" "subtype5" "subtype1" "subtype5" "subtype4" "subtype2"
 [55] "subtype5" "subtype4" "subtype5" "subtype5" "subtype3" "subtype4"
 [61] "subtype2" "subtype4" "subtype5" "subtype3" "subtype1" "subtype2"
 [67] "subtype1" "subtype2" "subtype3" "subtype1" "subtype5" "subtype6"
 [73] "subtype6" "subtype2" "subtype3" "subtype2" "subtype6" "subtype2"
 [79] "subtype3" "subtype5" "subtype3" "subtype1" "subtype2" "subtype1"
 [85] "subtype5" "subtype6" "subtype2" "subtype3" "subtype5" "subtype2"
 [91] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype5"
 [97] "subtype3" "subtype2" "subtype1" "subtype5" "subtype5" "subtype6"
[103] "subtype3" "subtype1" "subtype1" "subtype5" "subtype4" "subtype6"
[109] "subtype3" "subtype6" "subtype3" "subtype3" "subtype1" "subtype3"
[115] "subtype3" "subtype3" "subtype5" "subtype2" "subtype5" "subtype5"
[121] "subtype3" "subtype3" "subtype2" "subtype3" "subtype6" "subtype3"
[127] "subtype3" "subtype2" "subtype4" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype2" "subtype4" "subtype4"
[139] "subtype6" "subtype4" "subtype2" "subtype3" "subtype3" "subtype1"
[145] "subtype4" "subtype5" "subtype5" "subtype6" "subtype1" "subtype6"
[151] "subtype6" "subtype1" "subtype6" "subtype6" "subtype6" "subtype3"
[157] "subtype1" "subtype5" "subtype3" "subtype6" "subtype6" "subtype1"
[163] "subtype5" "subtype3" "subtype2" "subtype6" "subtype5" "subtype1"
[169] "subtype1" "subtype1" "subtype1" "subtype6" "subtype1" "subtype2"
[175] "subtype3" "subtype5" "subtype6" "subtype2" "subtype4" "subtype1"
[181] "subtype4" "subtype3" "subtype4" "subtype2" "subtype2" "subtype1"
[187] "subtype5" "subtype1" "subtype6" "subtype3" "subtype2" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype3" "subtype5" "subtype5"
[199] "subtype6" "subtype5"
D5V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      34
  subtype2                                      27
  subtype3                                      41
  subtype4                                      16
  subtype5                                      38
  subtype6                                      18
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             1                                 6
  subtype2                             0                                11
  subtype3                             0                                 0
  subtype4                             0                                 0
  subtype5                             0                                 0
  subtype6                             2                                 6
D5V3, multiclass
D5V4, binary
          cls
clus        0  1
  subtype1 20 21
  subtype2 18 20
  subtype3 13 28
  subtype4  4 12
  subtype5 13 25
  subtype6 12 14
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   20   21
  subtype2   18   20
  subtype3   13   28
  subtype4    4   12
  subtype5   13   25
  subtype6   12   14
          vv
clus       R0 R1 R2 RX
  subtype1 24  2  3  6
  subtype2 27  2  1  2
  subtype3 27  0  0  5
  subtype4 13  1  1  1
  subtype5 28  4  0  0
  subtype6 22  0  0  2
D5V5, multiclass

Clustering(6) Variable = RPPA_CHIERARCHICAL
D6V1, survival
          sevent
clus2       0  1
  subtype1  7  0
  subtype2 31  2
  subtype3 37  2
  subtype4 35  4
  subtype5 53  3
  subtype6 24  2
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
       7       33       39       39       56       26 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
       0        2        2        4        3        2 
$subtype1
TCGA-A5-A0GR TCGA-AP-A0LL TCGA-B5-A11Z TCGA-BG-A0M2 TCGA-BG-A0W1 TCGA-BG-A0YU 
       25.64        70.39         9.57        10.39        29.82         9.17 
TCGA-D1-A17L 
       15.09 

$subtype2
TCGA-A5-A0GE TCGA-A5-A0GQ TCGA-A5-A0R8 TCGA-A5-A0VP TCGA-AX-A064 TCGA-AX-A06L 
       89.33        38.37         4.11        30.48        34.98        48.62 
TCGA-B5-A0K7 TCGA-B5-A11I TCGA-B5-A11Y TCGA-BG-A0M0 TCGA-BG-A0MG TCGA-BK-A0CA 
       12.23        67.00        10.36         7.79        29.46        12.20 
TCGA-BK-A0CC TCGA-BK-A139 TCGA-BS-A0T9 TCGA-D1-A0ZR TCGA-D1-A101 TCGA-D1-A15X 
        6.94         7.86        46.95         0.56         1.74        29.88 
TCGA-D1-A163 TCGA-D1-A16D TCGA-D1-A16E TCGA-D1-A16F TCGA-D1-A16G TCGA-D1-A16J 
       30.84        29.85        29.88         2.63        27.42        24.39 
TCGA-D1-A16Q TCGA-D1-A16X TCGA-D1-A16Y TCGA-D1-A176 TCGA-D1-A17B TCGA-D1-A17C 
        7.27         3.65        17.49        16.64         6.97         0.03 
TCGA-D1-A17N TCGA-D1-A17S TCGA-D1-A17T 
        1.51        10.72         2.30 

$subtype3
TCGA-A5-A0GU TCGA-A5-A0R6 TCGA-A5-A0R9 TCGA-A5-A0RA TCGA-A5-A0VQ TCGA-AP-A051 
       16.27        12.13         9.67        18.25         5.82        83.67 
TCGA-AP-A05D TCGA-AP-A05N TCGA-AP-A05O TCGA-AP-A05P TCGA-AP-A0LE TCGA-AP-A0LG 
       44.84         7.86        12.20         8.55        98.17        63.16 
TCGA-AP-A0LH TCGA-AP-A0LJ TCGA-AP-A0LN TCGA-AP-A0LV TCGA-AX-A05T TCGA-AX-A05U 
       36.36        31.73        65.49        12.66        19.82        29.65 
TCGA-AX-A05Z TCGA-AX-A062 TCGA-AX-A06B TCGA-AX-A0IS TCGA-B5-A0K0 TCGA-B5-A0K2 
       46.45        45.96        53.88        35.01        22.32        22.42 
TCGA-B5-A0K4 TCGA-B5-A11N TCGA-B5-A11Q TCGA-B5-A11V TCGA-BG-A0MT TCGA-BG-A0RY 
       15.32        37.71        23.08         7.59         7.89         4.21 
TCGA-BG-A0VT TCGA-BG-A187 TCGA-BK-A0CB TCGA-BS-A0UJ TCGA-D1-A165 TCGA-D1-A16B 
        7.36         7.59         6.18         0.89         0.66        24.46 
TCGA-D1-A17K TCGA-D1-A17R TCGA-DI-A0WH 
       14.10        13.15        13.32 

$subtype4
TCGA-A5-A0G1 TCGA-A5-A0G2 TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0GH TCGA-A5-A0GV 
      106.88       133.25        35.47        25.97        54.94        15.95 
TCGA-A5-A0GW TCGA-A5-A0R7 TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A054 TCGA-AP-A056 
       12.66         1.32        21.99         5.95        23.31        66.61 
TCGA-AP-A059 TCGA-AP-A05A TCGA-AP-A05J TCGA-AP-A0LD TCGA-AP-A0LF TCGA-AP-A0LI 
        8.22        39.39        21.01        95.54         3.39        85.55 
TCGA-AP-A0LM TCGA-AP-A0LT TCGA-AX-A06D TCGA-AX-A06F TCGA-AX-A0J0 TCGA-B5-A0JN 
       27.12        38.96        12.26        51.09        40.08        67.99 
TCGA-B5-A0JY TCGA-B5-A0K3 TCGA-B5-A11E TCGA-B5-A11H TCGA-B5-A11U TCGA-B5-A11X 
       26.99        23.01         8.71        76.18         8.91        11.08 
TCGA-BG-A0M6 TCGA-BG-A0YV TCGA-BG-A18C TCGA-BS-A0TA TCGA-BS-A0U9 TCGA-D1-A168 
        7.92         6.12         5.56        23.47        57.50        30.02 
TCGA-D1-A16S TCGA-D1-A177 TCGA-D1-A179 
        7.82        11.41         6.77 

$subtype5
TCGA-A5-A0G9 TCGA-A5-A0GA TCGA-A5-A0GB TCGA-A5-A0GD TCGA-A5-A0GG TCGA-A5-A0GI 
       71.18        17.85         9.04         3.19        82.72        57.53 
TCGA-A5-A0GJ TCGA-A5-A0GM TCGA-A5-A0GN TCGA-AP-A0LP TCGA-AX-A05S TCGA-AX-A05W 
       47.57        47.61        48.56        61.64        13.58        68.32 
TCGA-AX-A05Y TCGA-AX-A060 TCGA-AX-A063 TCGA-AX-A06J TCGA-AX-A0J1 TCGA-B5-A0JZ 
       72.03        35.34        66.54        30.02        65.88        22.65 
TCGA-B5-A0K1 TCGA-B5-A11F TCGA-B5-A11S TCGA-B5-A11W TCGA-BG-A0LX TCGA-BG-A0M3 
       24.53       173.56        21.37        11.15         8.28        24.39 
TCGA-BG-A0M4 TCGA-BG-A0M7 TCGA-BG-A0M9 TCGA-BG-A0MC TCGA-BG-A0MH TCGA-BG-A0MS 
       15.78        22.95        25.15        27.19        44.09        18.18 
TCGA-BG-A0MU TCGA-BG-A186 TCGA-BG-A18B TCGA-BK-A0C9 TCGA-BK-A13C TCGA-BS-A0TC 
        7.59         7.56         5.10         9.50         6.64        74.30 
TCGA-BS-A0TI TCGA-BS-A0TJ TCGA-BS-A0U7 TCGA-BS-A0U8 TCGA-BS-A0UF TCGA-D1-A0ZZ 
       47.44        49.78        30.71        85.68        60.59        12.39 
TCGA-D1-A102 TCGA-D1-A15W TCGA-D1-A160 TCGA-D1-A167 TCGA-D1-A169 TCGA-D1-A16N 
        1.41        30.08         3.68        15.72        29.75        21.04 
TCGA-D1-A16O TCGA-D1-A16V TCGA-D1-A175 TCGA-D1-A17D TCGA-D1-A17H TCGA-D1-A17M 
       28.41         1.41         6.64         5.26        14.93        10.22 
TCGA-D1-A17Q TCGA-D1-A17U 
        1.78        13.02 

$subtype6
TCGA-A5-A0GX TCGA-A5-A0VO TCGA-AP-A05H TCGA-AX-A0IW TCGA-AX-A0IZ TCGA-B5-A0JT 
       30.38         4.21        27.32        37.74        43.82        43.13 
TCGA-B5-A0K9 TCGA-B5-A11G TCGA-B5-A121 TCGA-BG-A0LW TCGA-BG-A0M8 TCGA-BG-A0VV 
        5.46       101.13         8.52         6.38        22.68         8.55 
TCGA-BG-A18A TCGA-BS-A0TD TCGA-BS-A0TG TCGA-BS-A0V7 TCGA-D1-A0ZP TCGA-D1-A0ZU 
        8.28        65.82        66.87        46.98        22.68        19.00 
TCGA-D1-A103 TCGA-D1-A15V TCGA-D1-A15Z TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A16I 
       15.78        33.27         1.91        29.33        32.09        11.47 
TCGA-D1-A16R TCGA-D1-A17F 
        0.69         1.28 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
    9.17     0.03     0.66     1.32     1.41     0.69 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
   70.39    89.33    98.17   133.25   173.56   101.13 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
   15.09    12.23    16.27    23.31    23.67    22.68 
[1] "9.2 - 70.4 (15.1)"  "0.0 - 89.3 (12.2)"  "0.7 - 98.2 (16.3)" 
[4] "1.3 - 133.2 (23.3)" "1.4 - 173.6 (23.7)" "0.7 - 101.1 (22.7)"
  [1] "subtype4" "subtype4" "subtype4" "subtype4" "subtype5" "subtype5"
  [7] "subtype5" "subtype5" "subtype2" "subtype5" "subtype4" "subtype5"
 [13] "subtype5" "subtype5" "subtype5" "subtype2" "subtype1" "subtype3"
 [19] "subtype4" "subtype4" "subtype6" "subtype3" "subtype4" "subtype2"
 [25] "subtype3" "subtype3" "subtype6" "subtype2" "subtype3" "subtype3"
 [31] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
 [37] "subtype3" "subtype6" "subtype4" "subtype3" "subtype3" "subtype3"
 [43] "subtype4" "subtype3" "subtype4" "subtype3" "subtype3" "subtype4"
 [49] "subtype3" "subtype1" "subtype4" "subtype3" "subtype5" "subtype4"
 [55] "subtype3" "subtype5" "subtype3" "subtype3" "subtype5" "subtype5"
 [61] "subtype3" "subtype5" "subtype3" "subtype5" "subtype2" "subtype3"
 [67] "subtype4" "subtype4" "subtype5" "subtype2" "subtype3" "subtype6"
 [73] "subtype6" "subtype4" "subtype5" "subtype4" "subtype6" "subtype4"
 [79] "subtype5" "subtype3" "subtype5" "subtype3" "subtype4" "subtype3"
 [85] "subtype2" "subtype6" "subtype4" "subtype5" "subtype6" "subtype4"
 [91] "subtype2" "subtype3" "subtype3" "subtype5" "subtype4" "subtype3"
 [97] "subtype5" "subtype4" "subtype2" "subtype1" "subtype6" "subtype6"
[103] "subtype5" "subtype2" "subtype1" "subtype5" "subtype5" "subtype4"
[109] "subtype5" "subtype6" "subtype5" "subtype5" "subtype2" "subtype5"
[115] "subtype5" "subtype3" "subtype5" "subtype3" "subtype3" "subtype6"
[121] "subtype1" "subtype1" "subtype4" "subtype5" "subtype3" "subtype6"
[127] "subtype5" "subtype4" "subtype5" "subtype2" "subtype3" "subtype2"
[133] "subtype2" "subtype5" "subtype2" "subtype4" "subtype5" "subtype6"
[139] "subtype6" "subtype5" "subtype5" "subtype5" "subtype5" "subtype4"
[145] "subtype5" "subtype3" "subtype6" "subtype6" "subtype2" "subtype6"
[151] "subtype5" "subtype2" "subtype5" "subtype6" "subtype6" "subtype5"
[157] "subtype2" "subtype6" "subtype5" "subtype6" "subtype6" "subtype2"
[163] "subtype3" "subtype5" "subtype4" "subtype5" "subtype3" "subtype2"
[169] "subtype2" "subtype2" "subtype2" "subtype6" "subtype2" "subtype5"
[175] "subtype5" "subtype2" "subtype6" "subtype4" "subtype5" "subtype2"
[181] "subtype2" "subtype5" "subtype2" "subtype4" "subtype4" "subtype2"
[187] "subtype2" "subtype5" "subtype6" "subtype5" "subtype3" "subtype1"
[193] "subtype5" "subtype2" "subtype5" "subtype3" "subtype2" "subtype2"
[199] "subtype5" "subtype3"
  [1] "subtype4" "subtype4" "subtype4" "subtype4" "subtype5" "subtype5"
  [7] "subtype5" "subtype5" "subtype2" "subtype5" "subtype4" "subtype5"
 [13] "subtype5" "subtype5" "subtype5" "subtype2" "subtype1" "subtype3"
 [19] "subtype4" "subtype4" "subtype6" "subtype3" "subtype4" "subtype2"
 [25] "subtype3" "subtype3" "subtype6" "subtype2" "subtype3" "subtype3"
 [31] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
 [37] "subtype3" "subtype6" "subtype4" "subtype3" "subtype3" "subtype3"
 [43] "subtype4" "subtype3" "subtype4" "subtype3" "subtype3" "subtype4"
 [49] "subtype3" "subtype1" "subtype4" "subtype3" "subtype5" "subtype4"
 [55] "subtype3" "subtype5" "subtype3" "subtype3" "subtype5" "subtype5"
 [61] "subtype3" "subtype5" "subtype3" "subtype5" "subtype2" "subtype3"
 [67] "subtype4" "subtype4" "subtype5" "subtype2" "subtype3" "subtype6"
 [73] "subtype6" "subtype4" "subtype5" "subtype4" "subtype6" "subtype4"
 [79] "subtype5" "subtype3" "subtype5" "subtype3" "subtype4" "subtype3"
 [85] "subtype2" "subtype6" "subtype4" "subtype5" "subtype6" "subtype4"
 [91] "subtype2" "subtype3" "subtype3" "subtype5" "subtype4" "subtype3"
 [97] "subtype5" "subtype4" "subtype2" "subtype1" "subtype6" "subtype6"
[103] "subtype5" "subtype2" "subtype1" "subtype5" "subtype5" "subtype4"
[109] "subtype5" "subtype6" "subtype5" "subtype5" "subtype2" "subtype5"
[115] "subtype5" "subtype3" "subtype5" "subtype3" "subtype3" "subtype6"
[121] "subtype1" "subtype1" "subtype4" "subtype5" "subtype3" "subtype6"
[127] "subtype5" "subtype4" "subtype5" "subtype2" "subtype3" "subtype2"
[133] "subtype2" "subtype5" "subtype2" "subtype4" "subtype5" "subtype6"
[139] "subtype6" "subtype5" "subtype5" "subtype5" "subtype5" "subtype4"
[145] "subtype5" "subtype3" "subtype6" "subtype6" "subtype2" "subtype6"
[151] "subtype5" "subtype2" "subtype5" "subtype6" "subtype6" "subtype5"
[157] "subtype2" "subtype6" "subtype5" "subtype6" "subtype6" "subtype2"
[163] "subtype3" "subtype5" "subtype4" "subtype5" "subtype3" "subtype2"
[169] "subtype2" "subtype2" "subtype2" "subtype6" "subtype2" "subtype5"
[175] "subtype5" "subtype2" "subtype6" "subtype4" "subtype5" "subtype2"
[181] "subtype2" "subtype5" "subtype2" "subtype4" "subtype4" "subtype2"
[187] "subtype2" "subtype5" "subtype6" "subtype5" "subtype3" "subtype1"
[193] "subtype5" "subtype2" "subtype5" "subtype3" "subtype2" "subtype2"
[199] "subtype5" "subtype3"
  [1] "subtype4" "subtype4" "subtype4" "subtype4" "subtype5" "subtype5"
  [7] "subtype5" "subtype5" "subtype2" "subtype5" "subtype4" "subtype5"
 [13] "subtype5" "subtype5" "subtype5" "subtype2" "subtype1" "subtype3"
 [19] "subtype4" "subtype4" "subtype6" "subtype3" "subtype4" "subtype2"
 [25] "subtype3" "subtype3" "subtype6" "subtype2" "subtype3" "subtype3"
 [31] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
 [37] "subtype3" "subtype6" "subtype4" "subtype3" "subtype3" "subtype3"
 [43] "subtype4" "subtype3" "subtype4" "subtype3" "subtype3" "subtype4"
 [49] "subtype3" "subtype1" "subtype4" "subtype3" "subtype5" "subtype4"
 [55] "subtype3" "subtype5" "subtype3" "subtype3" "subtype5" "subtype5"
 [61] "subtype3" "subtype5" "subtype3" "subtype5" "subtype2" "subtype3"
 [67] "subtype4" "subtype4" "subtype5" "subtype2" "subtype3" "subtype6"
 [73] "subtype6" "subtype4" "subtype5" "subtype4" "subtype6" "subtype4"
 [79] "subtype5" "subtype3" "subtype5" "subtype3" "subtype4" "subtype3"
 [85] "subtype2" "subtype6" "subtype4" "subtype5" "subtype6" "subtype4"
 [91] "subtype2" "subtype3" "subtype3" "subtype5" "subtype4" "subtype3"
 [97] "subtype5" "subtype4" "subtype2" "subtype1" "subtype6" "subtype6"
[103] "subtype5" "subtype2" "subtype1" "subtype5" "subtype5" "subtype4"
[109] "subtype5" "subtype6" "subtype5" "subtype5" "subtype2" "subtype5"
[115] "subtype5" "subtype3" "subtype5" "subtype3" "subtype3" "subtype6"
[121] "subtype1" "subtype1" "subtype4" "subtype5" "subtype3" "subtype6"
[127] "subtype5" "subtype4" "subtype5" "subtype2" "subtype3" "subtype2"
[133] "subtype2" "subtype5" "subtype2" "subtype4" "subtype5" "subtype6"
[139] "subtype6" "subtype5" "subtype5" "subtype5" "subtype5" "subtype4"
[145] "subtype5" "subtype3" "subtype6" "subtype6" "subtype2" "subtype6"
[151] "subtype5" "subtype2" "subtype5" "subtype6" "subtype6" "subtype5"
[157] "subtype2" "subtype6" "subtype5" "subtype6" "subtype6" "subtype2"
[163] "subtype3" "subtype5" "subtype4" "subtype5" "subtype3" "subtype2"
[169] "subtype2" "subtype2" "subtype2" "subtype6" "subtype2" "subtype5"
[175] "subtype5" "subtype2" "subtype6" "subtype4" "subtype5" "subtype2"
[181] "subtype2" "subtype5" "subtype2" "subtype4" "subtype4" "subtype2"
[187] "subtype2" "subtype5" "subtype6" "subtype5" "subtype3" "subtype1"
[193] "subtype5" "subtype2" "subtype5" "subtype3" "subtype2" "subtype2"
[199] "subtype5" "subtype3"
D6V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                       7
  subtype2                                      29
  subtype3                                      36
  subtype4                                      26
  subtype5                                      55
  subtype6                                      21
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             0                                 0
  subtype2                             1                                 3
  subtype3                             1                                 2
  subtype4                             0                                13
  subtype5                             1                                 0
  subtype6                             0                                 5
D6V3, multiclass
D6V4, binary
          cls
clus        0  1
  subtype1  2  5
  subtype2 10 23
  subtype3 15 24
  subtype4 19 20
  subtype5 25 31
  subtype6  9 17
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    2    5
  subtype2   10   23
  subtype3   15   24
  subtype4   19   20
  subtype5   25   31
  subtype6    9   17
          vv
clus       R0 R1 R2 RX
  subtype1  5  0  0  1
  subtype2 21  1  1  6
  subtype3 28  5  0  0
  subtype4 24  2  3  3
  subtype5 43  1  1  4
  subtype6 20  0  0  2
D6V5, multiclass

Clustering(7) Variable = MRNASEQ_CNMF
D7V1, survival
          sevent
clus2        0   1
  subtype1 120  21
  subtype2 109   3
  subtype3 106   8
subtype1 subtype2 subtype3 
     141      112      114 
subtype1 subtype2 subtype3 
      21        3        8 
$subtype1
TCGA-A5-A0G1 TCGA-A5-A0G2 TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0GA TCGA-A5-A0GH 
      106.88       133.25        35.47        25.97        17.85        54.94 
TCGA-A5-A0GR TCGA-A5-A0R6 TCGA-A5-A1OF TCGA-A5-A1OG TCGA-AJ-A23M TCGA-AJ-A2QK 
       25.64        12.13         7.92        11.44         1.02         0.39 
TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A054 TCGA-AP-A056 TCGA-AP-A059 TCGA-AP-A05A 
       21.99         5.95        23.31        66.61         8.22        39.39 
TCGA-AP-A05D TCGA-AP-A05H TCGA-AP-A05J TCGA-AP-A05P TCGA-AP-A0L8 TCGA-AP-A0L9 
       44.84        27.32        21.01         8.55        48.79       113.19 
TCGA-AP-A0LD TCGA-AP-A0LF TCGA-AP-A0LH TCGA-AP-A0LI TCGA-AP-A0LM TCGA-AP-A1DK 
       95.54         3.39        36.36        85.55        27.12        54.25 
TCGA-AP-A1DQ TCGA-AP-A1DV TCGA-AP-A1E4 TCGA-AW-A1PO TCGA-AX-A06B TCGA-AX-A06D 
       38.93         6.71         8.78         0.56        53.88        12.26 
TCGA-AX-A06F TCGA-AX-A0IU TCGA-AX-A0IW TCGA-AX-A1C4 TCGA-AX-A1C5 TCGA-AX-A1C7 
       51.09        28.54        37.74        13.28        19.20        16.93 
TCGA-AX-A1C8 TCGA-AX-A1CA TCGA-AX-A1CC TCGA-AX-A1CF TCGA-AX-A1CP TCGA-AX-A1CR 
       13.55        20.28        12.43        76.83        36.39        11.08 
TCGA-AX-A2H2 TCGA-AX-A2H5 TCGA-AX-A2H8 TCGA-AX-A2HD TCGA-AX-A2HF TCGA-AX-A2HG 
        4.77        71.24        61.18        40.50        16.08        21.70 
TCGA-AX-A2HK TCGA-AX-A2IO TCGA-B5-A0K3 TCGA-B5-A0K4 TCGA-B5-A0K8 TCGA-B5-A11E 
        2.96        38.66        23.01        15.32        17.82         8.71 
TCGA-B5-A11I TCGA-B5-A11P TCGA-B5-A1MR TCGA-B5-A1MU TCGA-B5-A1MY TCGA-B5-A1N2 
       67.00        36.82       187.07        50.86        11.87        12.79 
TCGA-BG-A0M6 TCGA-BG-A0MT TCGA-BG-A0YV TCGA-BG-A18C TCGA-BG-A220 TCGA-BG-A221 
        7.92         7.89         6.12         5.56         7.23         1.51 
TCGA-BG-A222 TCGA-BG-A2AE TCGA-BG-A2L7 TCGA-BK-A0CC TCGA-BK-A139 TCGA-BK-A26L 
        0.46         0.53         5.82         6.94         7.86         7.66 
TCGA-BS-A0TE TCGA-BS-A0TJ TCGA-BS-A0U9 TCGA-BS-A0UV TCGA-BS-A0V8 TCGA-D1-A0ZP 
        4.80        49.78        57.50         4.90        49.55        22.68 
TCGA-D1-A0ZS TCGA-D1-A0ZZ TCGA-D1-A15V TCGA-D1-A15X TCGA-D1-A167 TCGA-D1-A168 
        4.83        12.39        33.27        29.88        15.72        30.02 
TCGA-D1-A16G TCGA-D1-A16I TCGA-D1-A16J TCGA-D1-A16N TCGA-D1-A16S TCGA-D1-A16Y 
       27.42        11.47        24.39        21.04         7.82        17.49 
TCGA-D1-A175 TCGA-D1-A179 TCGA-D1-A17H TCGA-D1-A17K TCGA-D1-A1NU TCGA-D1-A1NW 
        6.64         6.77        14.93        14.10        10.22         0.72 
TCGA-D1-A1NX TCGA-D1-A1NY TCGA-D1-A1O0 TCGA-D1-A1O8 TCGA-D1-A2G6 TCGA-D1-A2G7 
       13.12        13.02         0.07         3.95         8.48        44.88 
TCGA-DI-A0WH TCGA-DI-A1NN TCGA-DI-A1NO TCGA-DI-A2QU TCGA-E6-A1LZ TCGA-EC-A1QX 
       13.32        31.00         9.37        31.10        42.38         2.17 
TCGA-EO-A1Y5 TCGA-EO-A1Y8 TCGA-EO-A22T TCGA-EO-A2CG TCGA-EO-A2CH TCGA-EY-A1G7 
       10.92        10.78        33.01        22.09        19.40         6.21 
TCGA-EY-A1GC TCGA-EY-A1GM TCGA-EY-A1GR TCGA-EY-A1GS TCGA-EY-A1GT TCGA-EY-A1GV 
        4.54         6.87        11.31         9.34         9.86         8.45 
TCGA-EY-A212 TCGA-EY-A214 TCGA-EY-A215 TCGA-EY-A2OM TCGA-FI-A2CX TCGA-FI-A2CY 
        3.58         8.28        12.85         7.73        40.01        34.98 
TCGA-FI-A2D0 TCGA-FI-A2D2 TCGA-FI-A2D5 TCGA-FI-A2D6 TCGA-FI-A2EU TCGA-FI-A2EW 
       33.99        36.00        14.01         8.98        84.07        59.01 
TCGA-FI-A2EX TCGA-FI-A2F8 TCGA-FI-A2F9 
        9.07        25.02        26.01 

$subtype2
TCGA-A5-A0G9 TCGA-A5-A0GD TCGA-A5-A0GE TCGA-A5-A0GG TCGA-A5-A0GP TCGA-A5-A0GQ 
       71.18         3.19        89.33        82.72        35.74        38.37 
TCGA-A5-A0R8 TCGA-A5-A0RA TCGA-A5-A0VO TCGA-A5-A1OJ TCGA-A5-A1OK TCGA-AJ-A2QL 
        4.11        18.25         4.21         9.60         7.99         1.61 
TCGA-AJ-A2QN TCGA-AP-A05O TCGA-AP-A0LJ TCGA-AP-A0LO TCGA-AP-A0LP TCGA-AP-A0LS 
        2.01        12.20        31.73        33.40        61.64        54.84 
TCGA-AP-A1DP TCGA-AX-A05S TCGA-AX-A05T TCGA-AX-A05U TCGA-AX-A05Y TCGA-AX-A06J 
       35.54        13.58        19.82        29.65        72.03        30.02 
TCGA-AX-A06L TCGA-AX-A1C9 TCGA-AX-A1CE TCGA-AX-A1CJ TCGA-AX-A2H7 TCGA-B5-A0JS 
       48.62        15.25        20.05        54.08        33.53        40.80 
TCGA-B5-A0JT TCGA-B5-A0JX TCGA-B5-A0K1 TCGA-B5-A0K2 TCGA-B5-A0KB TCGA-B5-A11G 
       43.13        44.71        24.53        22.42         4.08       101.13 
TCGA-B5-A11H TCGA-B5-A11J TCGA-B5-A11L TCGA-B5-A11M TCGA-B5-A11O TCGA-B5-A11S 
       76.18        42.44        45.90        36.72        33.99        21.37 
TCGA-B5-A11W TCGA-B5-A11Y TCGA-B5-A121 TCGA-B5-A1MV TCGA-BG-A0M0 TCGA-BG-A0M2 
       11.15        10.36         8.52        12.49         7.79        10.39 
TCGA-BG-A0M4 TCGA-BG-A0M7 TCGA-BG-A0M9 TCGA-BG-A0MC TCGA-BG-A0MG TCGA-BG-A0MH 
       15.78        22.95        25.15        27.19        29.46        44.09 
TCGA-BG-A0RY TCGA-BG-A0VV TCGA-BG-A0VW TCGA-BG-A0VZ TCGA-BG-A0W1 TCGA-BG-A0W2 
        4.21         8.55         4.31        28.54        29.82        37.84 
TCGA-BG-A0YU TCGA-BG-A187 TCGA-BG-A18A TCGA-BG-A18B TCGA-BK-A0C9 TCGA-BK-A0CA 
        9.17         7.59         8.28         5.10         9.50        12.20 
TCGA-BK-A13C TCGA-BS-A0TA TCGA-BS-A0TC TCGA-BS-A0TD TCGA-BS-A0U5 TCGA-BS-A0UA 
        6.64        23.47        74.30        65.82        72.46        83.51 
TCGA-BS-A0UM TCGA-BS-A0V6 TCGA-D1-A0ZO TCGA-D1-A0ZR TCGA-D1-A0ZV TCGA-D1-A103 
       72.03        54.25         2.27         0.56        11.51        15.78 
TCGA-D1-A15W TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A165 TCGA-D1-A169 TCGA-D1-A16D 
       30.08        29.33        32.09         0.66        29.75        29.85 
TCGA-D1-A16E TCGA-D1-A16F TCGA-D1-A16O TCGA-D1-A16X TCGA-D1-A174 TCGA-D1-A176 
       29.88         2.63        28.41         3.65        10.65        16.64 
TCGA-D1-A17A TCGA-D1-A17B TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17N TCGA-D1-A17Q 
        0.62         6.97         5.26         1.28         1.51         1.78 
TCGA-D1-A17S TCGA-D1-A17T TCGA-D1-A17U TCGA-D1-A1NS TCGA-D1-A1NZ TCGA-D1-A1O5 
       10.72         2.30        13.02         1.41         0.26        12.39 
TCGA-D1-A1O7 TCGA-D1-A2G5 TCGA-EC-A24G TCGA-EY-A1GE TCGA-EY-A1GF TCGA-EY-A1GH 
        1.05        41.42         1.51        18.15        17.49        17.33 
TCGA-EY-A1GK TCGA-EY-A1GW TCGA-EY-A1H0 TCGA-FI-A2F4 
       16.54         8.55        11.15        28.93 

$subtype3
TCGA-A5-A0GB TCGA-A5-A0GI TCGA-A5-A0GJ TCGA-A5-A0GM TCGA-A5-A0GN TCGA-A5-A0GU 
        9.04        57.53        47.57        47.61        48.56        16.27 
TCGA-A5-A0GV TCGA-A5-A0GW TCGA-A5-A0GX TCGA-A5-A0R7 TCGA-A5-A0R9 TCGA-A5-A0VP 
       15.95        12.66        30.38         1.32         9.67        30.48 
TCGA-A5-A0VQ TCGA-AJ-A23O TCGA-AP-A051 TCGA-AP-A05N TCGA-AP-A0LE TCGA-AP-A0LG 
        5.82         1.97        83.67         7.86        98.17        63.16 
TCGA-AP-A0LL TCGA-AP-A0LN TCGA-AP-A0LT TCGA-AP-A0LV TCGA-AP-A1DH TCGA-AP-A1DM 
       70.39        65.49        38.96        12.66        59.70        43.69 
TCGA-AP-A1DO TCGA-AP-A1DR TCGA-AP-A1E0 TCGA-AP-A1E1 TCGA-AP-A1E3 TCGA-AX-A05Z 
       31.30        37.18        22.72        10.42        17.19        46.45 
TCGA-AX-A060 TCGA-AX-A062 TCGA-AX-A063 TCGA-AX-A064 TCGA-AX-A06H TCGA-AX-A0IS 
       35.34        45.96        66.54        34.98        27.39        35.01 
TCGA-AX-A0IZ TCGA-AX-A0J0 TCGA-AX-A0J1 TCGA-AX-A1CI TCGA-AX-A1CK TCGA-AX-A1CN 
       43.82        40.08        65.88        72.56        67.46        25.12 
TCGA-AX-A2HA TCGA-AX-A2HC TCGA-AX-A2HJ TCGA-B5-A0JU TCGA-B5-A0JV TCGA-B5-A0JY 
       68.71        33.40        27.32        48.76        36.99        26.99 
TCGA-B5-A0JZ TCGA-B5-A0K0 TCGA-B5-A0K6 TCGA-B5-A0K7 TCGA-B5-A11F TCGA-B5-A11N 
       22.65        22.32        14.01        12.23       173.56        37.71 
TCGA-B5-A11Q TCGA-B5-A11U TCGA-B5-A11V TCGA-B5-A11X TCGA-B5-A11Z TCGA-B5-A1MX 
       23.08         8.91         7.59        11.08         9.57         5.72 
TCGA-B5-A1MZ TCGA-BG-A0LW TCGA-BG-A0LX TCGA-BG-A0M3 TCGA-BG-A0M8 TCGA-BG-A0MA 
       15.29         6.38         8.28        24.39        22.68        10.72 
TCGA-BG-A0MI TCGA-BG-A0MO TCGA-BG-A0MQ TCGA-BG-A0MS TCGA-BG-A0MU TCGA-BG-A0VT 
       23.47        33.57        25.02        18.18         7.59         7.36 
TCGA-BG-A0VX TCGA-BG-A186 TCGA-BK-A0CB TCGA-BS-A0T9 TCGA-BS-A0TG TCGA-BS-A0TI 
       16.11         7.56         6.18        46.95        66.87        47.44 
TCGA-BS-A0U7 TCGA-BS-A0U8 TCGA-BS-A0UF TCGA-BS-A0UJ TCGA-BS-A0UL TCGA-BS-A0UT 
       30.71        85.68        60.59         0.89         1.18        19.56 
TCGA-BS-A0VI TCGA-BS-A0WQ TCGA-D1-A0ZN TCGA-D1-A0ZQ TCGA-D1-A0ZU TCGA-D1-A101 
       54.61        39.68        16.83         0.26        19.00         1.74 
TCGA-D1-A102 TCGA-D1-A15Z TCGA-D1-A160 TCGA-D1-A163 TCGA-D1-A16B TCGA-D1-A16Q 
        1.41         1.91         3.68        30.84        24.46         7.27 
TCGA-D1-A16R TCGA-D1-A16V TCGA-D1-A177 TCGA-D1-A17C TCGA-D1-A17L TCGA-D1-A17M 
        0.69         1.41        11.41         0.03        15.09        10.22 
TCGA-D1-A17R TCGA-DI-A1BY TCGA-E6-A1LX TCGA-E6-A1M0 TCGA-EO-A22R TCGA-EO-A22S 
       13.15        36.62        23.38        14.04        31.96        35.05 
TCGA-EY-A1G8 TCGA-EY-A1GD TCGA-EY-A1GI TCGA-EY-A1GQ TCGA-EY-A1GU TCGA-FI-A2D4 
       14.96         8.15        16.64        11.18         8.52         7.96 

subtype1 subtype2 subtype3 
    0.07     0.26     0.03 
subtype1 subtype2 subtype3 
  187.07   101.13   173.56 
subtype1 subtype2 subtype3 
   15.32    17.82    22.70 
[1] "0.1 - 187.1 (15.3)" "0.3 - 101.1 (17.8)" "0.0 - 173.6 (22.7)"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
  [7] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [13] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
 [19] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
 [25] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [31] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
 [37] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [49] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [55] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
 [61] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
 [67] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
 [79] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [97] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[103] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[109] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[115] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[121] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[127] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[133] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[139] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[145] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[151] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[163] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[169] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[175] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[181] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[187] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[205] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[217] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[229] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[235] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[241] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[253] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[259] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[265] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[271] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[277] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[283] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[289] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[295] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[301] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[307] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[313] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[319] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[325] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[331] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[337] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[343] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[349] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[367] "subtype1"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
  [7] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [13] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
 [19] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
 [25] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [31] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
 [37] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [49] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [55] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
 [61] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
 [67] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
 [79] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [97] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[103] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[109] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[115] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[121] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[127] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[133] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[139] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[145] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[151] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[163] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[169] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[175] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[181] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[187] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[205] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[217] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[229] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[235] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[241] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[253] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[259] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[265] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[271] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[277] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[283] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[289] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[295] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[301] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[307] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[313] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[319] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[325] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[331] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[337] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[343] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[349] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[367] "subtype1"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
  [7] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [13] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
 [19] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
 [25] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [31] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
 [37] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [49] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [55] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
 [61] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
 [67] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
 [79] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [97] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[103] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[109] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[115] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[121] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[127] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[133] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[139] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[145] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[151] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[163] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[169] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[175] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[181] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[187] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[205] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[217] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[229] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[235] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[241] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[253] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[259] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[265] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[271] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[277] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[283] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[289] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[295] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[301] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[307] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[313] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[319] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[325] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[331] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[337] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[343] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[349] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[367] "subtype1"
D7V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      76
  subtype2                                     112
  subtype3                                     114
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             9                                57
  subtype2                             1                                 0
  subtype3                             0                                 0
D7V3, multiclass
D7V4, binary
          cls
clus        0  1
  subtype1 55 87
  subtype2 28 85
  subtype3 40 74
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   55   87
  subtype2   28   85
  subtype3   40   74
     clus
vv    subtype1 subtype2 subtype3
  NO        55       28       40
  YES       87       85       74
          vv
clus       R0 R1 R2 RX
  subtype1 96 12  8 10
  subtype2 80  4  2  8
  subtype3 85  5  2  4
D7V5, multiclass

Clustering(8) Variable = MRNASEQ_CHIERARCHICAL
D8V1, survival
          sevent
clus2        0   1
  subtype1  58   6
  subtype2  96   2
  subtype3  57   8
  subtype4 124  16
subtype1 subtype2 subtype3 subtype4 
      64       98       65      140 
subtype1 subtype2 subtype3 subtype4 
       6        2        8       16 
$subtype1
TCGA-A5-A0GI TCGA-A5-A0GM TCGA-A5-A0GN TCGA-A5-A0GU TCGA-A5-A0GV TCGA-A5-A0GX 
       57.53        47.61        48.56        16.27        15.95        30.38 
TCGA-A5-A0R9 TCGA-A5-A0VQ TCGA-AP-A05N TCGA-AP-A0LG TCGA-AP-A0LL TCGA-AP-A0LN 
        9.67         5.82         7.86        63.16        70.39        65.49 
TCGA-AP-A0LV TCGA-AX-A05T TCGA-AX-A05U TCGA-AX-A062 TCGA-AX-A0IS TCGA-AX-A0IZ 
       12.66        19.82        29.65        45.96        35.01        43.82 
TCGA-AX-A1CI TCGA-AX-A1CK TCGA-AX-A1CN TCGA-AX-A2HJ TCGA-B5-A0JU TCGA-B5-A0K0 
       72.56        67.46        25.12        27.32        48.76        22.32 
TCGA-B5-A0K6 TCGA-B5-A0K7 TCGA-B5-A11F TCGA-B5-A11V TCGA-B5-A11Z TCGA-B5-A1MZ 
       14.01        12.23       173.56         7.59         9.57        15.29 
TCGA-BG-A0LW TCGA-BG-A0M3 TCGA-BG-A0MA TCGA-BG-A0MI TCGA-BG-A0MO TCGA-BG-A0MS 
        6.38        24.39        10.72        23.47        33.57        18.18 
TCGA-BG-A0MU TCGA-BG-A0VT TCGA-BG-A0VX TCGA-BG-A0W2 TCGA-BG-A186 TCGA-BK-A0CB 
        7.59         7.36        16.11        37.84         7.56         6.18 
TCGA-BS-A0T9 TCGA-BS-A0TG TCGA-BS-A0UJ TCGA-BS-A0UT TCGA-BS-A0VI TCGA-BS-A0WQ 
       46.95        66.87         0.89        19.56        54.61        39.68 
TCGA-D1-A0ZN TCGA-D1-A0ZU TCGA-D1-A102 TCGA-D1-A15Z TCGA-D1-A16B TCGA-D1-A16Q 
       16.83        19.00         1.41         1.91        24.46         7.27 
TCGA-D1-A16R TCGA-D1-A17C TCGA-D1-A17M TCGA-D1-A17N TCGA-D1-A17R TCGA-D1-A17T 
        0.69         0.03        10.22         1.51        13.15         2.30 
TCGA-DI-A1BY TCGA-EY-A1G8 TCGA-EY-A1GD TCGA-EY-A1GI 
       36.62        14.96         8.15        16.64 

$subtype2
TCGA-A5-A0G9 TCGA-A5-A0GD TCGA-A5-A0GE TCGA-A5-A0GG TCGA-A5-A0GP TCGA-A5-A0GQ 
       71.18         3.19        89.33        82.72        35.74        38.37 
TCGA-A5-A0R8 TCGA-A5-A0RA TCGA-A5-A0VO TCGA-A5-A1OJ TCGA-A5-A1OK TCGA-AJ-A2QL 
        4.11        18.25         4.21         9.60         7.99         1.61 
TCGA-AJ-A2QN TCGA-AP-A05O TCGA-AP-A0LJ TCGA-AP-A0LO TCGA-AP-A0LP TCGA-AP-A1DP 
        2.01        12.20        31.73        33.40        61.64        35.54 
TCGA-AX-A05Y TCGA-AX-A06J TCGA-AX-A06L TCGA-AX-A1C9 TCGA-AX-A1CJ TCGA-B5-A0JS 
       72.03        30.02        48.62        15.25        54.08        40.80 
TCGA-B5-A0JT TCGA-B5-A0JX TCGA-B5-A0K1 TCGA-B5-A0K2 TCGA-B5-A11G TCGA-B5-A11J 
       43.13        44.71        24.53        22.42       101.13        42.44 
TCGA-B5-A11L TCGA-B5-A11M TCGA-B5-A11O TCGA-B5-A11S TCGA-B5-A11W TCGA-B5-A11Y 
       45.90        36.72        33.99        21.37        11.15        10.36 
TCGA-B5-A121 TCGA-B5-A1MV TCGA-BG-A0M0 TCGA-BG-A0M2 TCGA-BG-A0M7 TCGA-BG-A0M9 
        8.52        12.49         7.79        10.39        22.95        25.15 
TCGA-BG-A0MC TCGA-BG-A0MH TCGA-BG-A0VV TCGA-BG-A0VW TCGA-BG-A0VZ TCGA-BG-A0W1 
       27.19        44.09         8.55         4.31        28.54        29.82 
TCGA-BG-A0YU TCGA-BG-A187 TCGA-BG-A18A TCGA-BG-A18B TCGA-BK-A0C9 TCGA-BK-A0CA 
        9.17         7.59         8.28         5.10         9.50        12.20 
TCGA-BK-A13C TCGA-BS-A0TA TCGA-BS-A0TC TCGA-BS-A0TD TCGA-BS-A0U5 TCGA-BS-A0UA 
        6.64        23.47        74.30        65.82        72.46        83.51 
TCGA-BS-A0UM TCGA-BS-A0V6 TCGA-D1-A0ZO TCGA-D1-A0ZR TCGA-D1-A0ZV TCGA-D1-A103 
       72.03        54.25         2.27         0.56        11.51        15.78 
TCGA-D1-A15W TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A165 TCGA-D1-A16D TCGA-D1-A16E 
       30.08        29.33        32.09         0.66        29.85        29.88 
TCGA-D1-A16F TCGA-D1-A16O TCGA-D1-A16X TCGA-D1-A174 TCGA-D1-A175 TCGA-D1-A176 
        2.63        28.41         3.65        10.65         6.64        16.64 
TCGA-D1-A17A TCGA-D1-A17B TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17L TCGA-D1-A17Q 
        0.62         6.97         5.26         1.28        15.09         1.78 
TCGA-D1-A17S TCGA-D1-A17U TCGA-D1-A1NS TCGA-D1-A1NZ TCGA-D1-A1O5 TCGA-D1-A1O7 
       10.72        13.02         1.41         0.26        12.39         1.05 
TCGA-D1-A2G5 TCGA-EC-A24G TCGA-EY-A1GE TCGA-EY-A1GF TCGA-EY-A1GH TCGA-EY-A1GK 
       41.42         1.51        18.15        17.49        17.33        16.54 
TCGA-EY-A1H0 TCGA-FI-A2F4 
       11.15        28.93 

$subtype3
TCGA-A5-A0G1 TCGA-A5-A0GA TCGA-A5-A0GH TCGA-A5-A0R7 TCGA-A5-A1OF TCGA-AJ-A23O 
      106.88        17.85        54.94         1.32         7.92         1.97 
TCGA-AP-A051 TCGA-AP-A059 TCGA-AP-A0LE TCGA-AP-A0LH TCGA-AP-A0LM TCGA-AP-A0LS 
       83.67         8.22        98.17        36.36        27.12        54.84 
TCGA-AP-A0LT TCGA-AP-A1DM TCGA-AP-A1DO TCGA-AP-A1DR TCGA-AP-A1DV TCGA-AP-A1E1 
       38.96        43.69        31.30        37.18         6.71        10.42 
TCGA-AX-A05S TCGA-AX-A05Z TCGA-AX-A060 TCGA-AX-A063 TCGA-AX-A064 TCGA-AX-A06B 
       13.58        46.45        35.34        66.54        34.98        53.88 
TCGA-AX-A06F TCGA-AX-A06H TCGA-AX-A0J1 TCGA-AX-A1C4 TCGA-AX-A2HA TCGA-B5-A0JV 
       51.09        27.39        65.88        13.28        68.71        36.99 
TCGA-B5-A0JZ TCGA-B5-A11H TCGA-B5-A11N TCGA-B5-A11Q TCGA-B5-A1MX TCGA-BG-A0LX 
       22.65        76.18        37.71        23.08         5.72         8.28 
TCGA-BG-A0M4 TCGA-BG-A0M8 TCGA-BG-A0MQ TCGA-BG-A0RY TCGA-BG-A222 TCGA-BS-A0TE 
       15.78        22.68        25.02         4.21         0.46         4.80 
TCGA-BS-A0TI TCGA-BS-A0U7 TCGA-BS-A0U8 TCGA-BS-A0UL TCGA-BS-A0V8 TCGA-D1-A0ZQ 
       47.44        30.71        85.68         1.18        49.55         0.26 
TCGA-D1-A101 TCGA-D1-A15X TCGA-D1-A160 TCGA-D1-A163 TCGA-D1-A16G TCGA-D1-A16J 
        1.74        29.88         3.68        30.84        27.42        24.39 
TCGA-D1-A177 TCGA-D1-A17H TCGA-D1-A1NY TCGA-D1-A2G6 TCGA-E6-A1LX TCGA-EC-A1QX 
       11.41        14.93        13.02         8.48        23.38         2.17 
TCGA-EO-A22R TCGA-EO-A22T TCGA-EY-A1GQ TCGA-EY-A1GU TCGA-EY-A215 
       31.96        33.01        11.18         8.52        12.85 

$subtype4
TCGA-A5-A0G2 TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0GB TCGA-A5-A0GJ TCGA-A5-A0GR 
      133.25        35.47        25.97         9.04        47.57        25.64 
TCGA-A5-A0GW TCGA-A5-A0R6 TCGA-A5-A0VP TCGA-A5-A1OG TCGA-AJ-A23M TCGA-AJ-A2QK 
       12.66        12.13        30.48        11.44         1.02         0.39 
TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A054 TCGA-AP-A056 TCGA-AP-A05A TCGA-AP-A05D 
       21.99         5.95        23.31        66.61        39.39        44.84 
TCGA-AP-A05H TCGA-AP-A05J TCGA-AP-A05P TCGA-AP-A0L8 TCGA-AP-A0L9 TCGA-AP-A0LD 
       27.32        21.01         8.55        48.79       113.19        95.54 
TCGA-AP-A0LF TCGA-AP-A0LI TCGA-AP-A1DH TCGA-AP-A1DK TCGA-AP-A1DQ TCGA-AP-A1E0 
        3.39        85.55        59.70        54.25        38.93        22.72 
TCGA-AP-A1E3 TCGA-AP-A1E4 TCGA-AW-A1PO TCGA-AX-A06D TCGA-AX-A0IU TCGA-AX-A0IW 
       17.19         8.78         0.56        12.26        28.54        37.74 
TCGA-AX-A0J0 TCGA-AX-A1C5 TCGA-AX-A1C7 TCGA-AX-A1C8 TCGA-AX-A1CA TCGA-AX-A1CC 
       40.08        19.20        16.93        13.55        20.28        12.43 
TCGA-AX-A1CE TCGA-AX-A1CF TCGA-AX-A1CP TCGA-AX-A1CR TCGA-AX-A2H2 TCGA-AX-A2H5 
       20.05        76.83        36.39        11.08         4.77        71.24 
TCGA-AX-A2H7 TCGA-AX-A2H8 TCGA-AX-A2HC TCGA-AX-A2HD TCGA-AX-A2HF TCGA-AX-A2HG 
       33.53        61.18        33.40        40.50        16.08        21.70 
TCGA-AX-A2HK TCGA-AX-A2IO TCGA-B5-A0JY TCGA-B5-A0K3 TCGA-B5-A0K4 TCGA-B5-A0K8 
        2.96        38.66        26.99        23.01        15.32        17.82 
TCGA-B5-A0KB TCGA-B5-A11E TCGA-B5-A11I TCGA-B5-A11P TCGA-B5-A11U TCGA-B5-A11X 
        4.08         8.71        67.00        36.82         8.91        11.08 
TCGA-B5-A1MR TCGA-B5-A1MU TCGA-B5-A1MY TCGA-B5-A1N2 TCGA-BG-A0M6 TCGA-BG-A0MG 
      187.07        50.86        11.87        12.79         7.92        29.46 
TCGA-BG-A0MT TCGA-BG-A0YV TCGA-BG-A18C TCGA-BG-A220 TCGA-BG-A221 TCGA-BG-A2AE 
        7.89         6.12         5.56         7.23         1.51         0.53 
TCGA-BG-A2L7 TCGA-BK-A0CC TCGA-BK-A139 TCGA-BK-A26L TCGA-BS-A0TJ TCGA-BS-A0U9 
        5.82         6.94         7.86         7.66        49.78        57.50 
TCGA-BS-A0UF TCGA-BS-A0UV TCGA-D1-A0ZP TCGA-D1-A0ZS TCGA-D1-A0ZZ TCGA-D1-A15V 
       60.59         4.90        22.68         4.83        12.39        33.27 
TCGA-D1-A167 TCGA-D1-A168 TCGA-D1-A169 TCGA-D1-A16I TCGA-D1-A16N TCGA-D1-A16S 
       15.72        30.02        29.75        11.47        21.04         7.82 
TCGA-D1-A16V TCGA-D1-A16Y TCGA-D1-A179 TCGA-D1-A17K TCGA-D1-A1NU TCGA-D1-A1NW 
        1.41        17.49         6.77        14.10        10.22         0.72 
TCGA-D1-A1NX TCGA-D1-A1O0 TCGA-D1-A1O8 TCGA-D1-A2G7 TCGA-DI-A0WH TCGA-DI-A1NN 
       13.12         0.07         3.95        44.88        13.32        31.00 
TCGA-DI-A1NO TCGA-DI-A2QU TCGA-E6-A1LZ TCGA-E6-A1M0 TCGA-EO-A1Y5 TCGA-EO-A1Y8 
        9.37        31.10        42.38        14.04        10.92        10.78 
TCGA-EO-A22S TCGA-EO-A2CG TCGA-EO-A2CH TCGA-EY-A1G7 TCGA-EY-A1GC TCGA-EY-A1GM 
       35.05        22.09        19.40         6.21         4.54         6.87 
TCGA-EY-A1GR TCGA-EY-A1GS TCGA-EY-A1GT TCGA-EY-A1GV TCGA-EY-A1GW TCGA-EY-A212 
       11.31         9.34         9.86         8.45         8.55         3.58 
TCGA-EY-A214 TCGA-EY-A2OM TCGA-FI-A2CX TCGA-FI-A2CY TCGA-FI-A2D0 TCGA-FI-A2D2 
        8.28         7.73        40.01        34.98        33.99        36.00 
TCGA-FI-A2D4 TCGA-FI-A2D5 TCGA-FI-A2D6 TCGA-FI-A2EU TCGA-FI-A2EW TCGA-FI-A2EX 
        7.96        14.01         8.98        84.07        59.01         9.07 
TCGA-FI-A2F8 TCGA-FI-A2F9 
       25.02        26.01 

subtype1 subtype2 subtype3 subtype4 
    0.03     0.26     0.26     0.07 
subtype1 subtype2 subtype3 subtype4 
  173.56   101.13   106.88   187.07 
subtype1 subtype2 subtype3 subtype4 
  17.505   16.985   25.020   16.505 
[1] "0.0 - 173.6 (17.5)" "0.3 - 101.1 (17.0)" "0.3 - 106.9 (25.0)"
[4] "0.1 - 187.1 (16.5)"
  [1] "subtype3" "subtype4" "subtype4" "subtype4" "subtype2" "subtype3"
  [7] "subtype4" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
 [13] "subtype4" "subtype1" "subtype1" "subtype2" "subtype2" "subtype4"
 [19] "subtype1" "subtype1" "subtype4" "subtype1" "subtype4" "subtype3"
 [25] "subtype2" "subtype1" "subtype2" "subtype2" "subtype4" "subtype1"
 [31] "subtype3" "subtype4" "subtype2" "subtype2" "subtype4" "subtype3"
 [37] "subtype4" "subtype2" "subtype2" "subtype3" "subtype4" "subtype4"
 [43] "subtype4" "subtype4" "subtype3" "subtype4" "subtype4" "subtype4"
 [49] "subtype4" "subtype1" "subtype2" "subtype4" "subtype4" "subtype4"
 [55] "subtype4" "subtype3" "subtype4" "subtype1" "subtype3" "subtype4"
 [61] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
 [67] "subtype3" "subtype3" "subtype1" "subtype4" "subtype4" "subtype3"
 [73] "subtype3" "subtype2" "subtype4" "subtype3" "subtype3" "subtype4"
 [79] "subtype3" "subtype4" "subtype4" "subtype4" "subtype3" "subtype1"
 [85] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
 [91] "subtype3" "subtype3" "subtype4" "subtype3" "subtype3" "subtype2"
 [97] "subtype2" "subtype1" "subtype4" "subtype4" "subtype1" "subtype4"
[103] "subtype3" "subtype3" "subtype4" "subtype4" "subtype4" "subtype2"
[109] "subtype4" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
[115] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype4"
[121] "subtype4" "subtype4" "subtype3" "subtype4" "subtype4" "subtype4"
[127] "subtype4" "subtype1" "subtype4" "subtype4" "subtype2" "subtype2"
[133] "subtype1" "subtype3" "subtype2" "subtype4" "subtype3" "subtype1"
[139] "subtype2" "subtype2" "subtype4" "subtype4" "subtype1" "subtype1"
[145] "subtype4" "subtype4" "subtype4" "subtype1" "subtype2" "subtype3"
[151] "subtype4" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype4" "subtype3" "subtype2" "subtype4" "subtype1" "subtype2"
[163] "subtype4" "subtype2" "subtype1" "subtype2" "subtype4" "subtype4"
[169] "subtype2" "subtype3" "subtype4" "subtype1" "subtype4" "subtype1"
[175] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype4"
[181] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype4"
[187] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
[193] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[199] "subtype2" "subtype2" "subtype1" "subtype2" "subtype4" "subtype1"
[205] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[211] "subtype3" "subtype4" "subtype4" "subtype2" "subtype2" "subtype1"
[217] "subtype4" "subtype4" "subtype2" "subtype4" "subtype1" "subtype2"
[223] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype4"
[229] "subtype2" "subtype3" "subtype3" "subtype4" "subtype2" "subtype4"
[235] "subtype1" "subtype3" "subtype2" "subtype1" "subtype4" "subtype2"
[241] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype4"
[247] "subtype3" "subtype2" "subtype4" "subtype1" "subtype2" "subtype4"
[253] "subtype3" "subtype1" "subtype2" "subtype4" "subtype2" "subtype3"
[259] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[265] "subtype4" "subtype4" "subtype4" "subtype1" "subtype2" "subtype2"
[271] "subtype2" "subtype3" "subtype4" "subtype3" "subtype4" "subtype2"
[277] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype4"
[283] "subtype2" "subtype2" "subtype2" "subtype3" "subtype4" "subtype2"
[289] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype4"
[295] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[301] "subtype1" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[307] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
[313] "subtype2" "subtype3" "subtype4" "subtype4" "subtype1" "subtype4"
[319] "subtype4" "subtype4" "subtype3" "subtype4" "subtype4" "subtype3"
[325] "subtype2" "subtype4" "subtype4" "subtype3" "subtype4" "subtype3"
[331] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype1"
[337] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype4"
[343] "subtype3" "subtype4" "subtype4" "subtype4" "subtype3" "subtype4"
[349] "subtype4" "subtype2" "subtype4" "subtype4" "subtype3" "subtype4"
[355] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[361] "subtype4" "subtype4" "subtype4" "subtype4" "subtype2" "subtype4"
[367] "subtype4"
  [1] "subtype3" "subtype4" "subtype4" "subtype4" "subtype2" "subtype3"
  [7] "subtype4" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
 [13] "subtype4" "subtype1" "subtype1" "subtype2" "subtype2" "subtype4"
 [19] "subtype1" "subtype1" "subtype4" "subtype1" "subtype4" "subtype3"
 [25] "subtype2" "subtype1" "subtype2" "subtype2" "subtype4" "subtype1"
 [31] "subtype3" "subtype4" "subtype2" "subtype2" "subtype4" "subtype3"
 [37] "subtype4" "subtype2" "subtype2" "subtype3" "subtype4" "subtype4"
 [43] "subtype4" "subtype4" "subtype3" "subtype4" "subtype4" "subtype4"
 [49] "subtype4" "subtype1" "subtype2" "subtype4" "subtype4" "subtype4"
 [55] "subtype4" "subtype3" "subtype4" "subtype1" "subtype3" "subtype4"
 [61] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
 [67] "subtype3" "subtype3" "subtype1" "subtype4" "subtype4" "subtype3"
 [73] "subtype3" "subtype2" "subtype4" "subtype3" "subtype3" "subtype4"
 [79] "subtype3" "subtype4" "subtype4" "subtype4" "subtype3" "subtype1"
 [85] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
 [91] "subtype3" "subtype3" "subtype4" "subtype3" "subtype3" "subtype2"
 [97] "subtype2" "subtype1" "subtype4" "subtype4" "subtype1" "subtype4"
[103] "subtype3" "subtype3" "subtype4" "subtype4" "subtype4" "subtype2"
[109] "subtype4" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
[115] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype4"
[121] "subtype4" "subtype4" "subtype3" "subtype4" "subtype4" "subtype4"
[127] "subtype4" "subtype1" "subtype4" "subtype4" "subtype2" "subtype2"
[133] "subtype1" "subtype3" "subtype2" "subtype4" "subtype3" "subtype1"
[139] "subtype2" "subtype2" "subtype4" "subtype4" "subtype1" "subtype1"
[145] "subtype4" "subtype4" "subtype4" "subtype1" "subtype2" "subtype3"
[151] "subtype4" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype4" "subtype3" "subtype2" "subtype4" "subtype1" "subtype2"
[163] "subtype4" "subtype2" "subtype1" "subtype2" "subtype4" "subtype4"
[169] "subtype2" "subtype3" "subtype4" "subtype1" "subtype4" "subtype1"
[175] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype4"
[181] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype4"
[187] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
[193] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[199] "subtype2" "subtype2" "subtype1" "subtype2" "subtype4" "subtype1"
[205] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[211] "subtype3" "subtype4" "subtype4" "subtype2" "subtype2" "subtype1"
[217] "subtype4" "subtype4" "subtype2" "subtype4" "subtype1" "subtype2"
[223] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype4"
[229] "subtype2" "subtype3" "subtype3" "subtype4" "subtype2" "subtype4"
[235] "subtype1" "subtype3" "subtype2" "subtype1" "subtype4" "subtype2"
[241] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype4"
[247] "subtype3" "subtype2" "subtype4" "subtype1" "subtype2" "subtype4"
[253] "subtype3" "subtype1" "subtype2" "subtype4" "subtype2" "subtype3"
[259] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[265] "subtype4" "subtype4" "subtype4" "subtype1" "subtype2" "subtype2"
[271] "subtype2" "subtype3" "subtype4" "subtype3" "subtype4" "subtype2"
[277] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype4"
[283] "subtype2" "subtype2" "subtype2" "subtype3" "subtype4" "subtype2"
[289] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype4"
[295] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[301] "subtype1" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[307] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
[313] "subtype2" "subtype3" "subtype4" "subtype4" "subtype1" "subtype4"
[319] "subtype4" "subtype4" "subtype3" "subtype4" "subtype4" "subtype3"
[325] "subtype2" "subtype4" "subtype4" "subtype3" "subtype4" "subtype3"
[331] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype1"
[337] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype4"
[343] "subtype3" "subtype4" "subtype4" "subtype4" "subtype3" "subtype4"
[349] "subtype4" "subtype2" "subtype4" "subtype4" "subtype3" "subtype4"
[355] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[361] "subtype4" "subtype4" "subtype4" "subtype4" "subtype2" "subtype4"
[367] "subtype4"
  [1] "subtype3" "subtype4" "subtype4" "subtype4" "subtype2" "subtype3"
  [7] "subtype4" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
 [13] "subtype4" "subtype1" "subtype1" "subtype2" "subtype2" "subtype4"
 [19] "subtype1" "subtype1" "subtype4" "subtype1" "subtype4" "subtype3"
 [25] "subtype2" "subtype1" "subtype2" "subtype2" "subtype4" "subtype1"
 [31] "subtype3" "subtype4" "subtype2" "subtype2" "subtype4" "subtype3"
 [37] "subtype4" "subtype2" "subtype2" "subtype3" "subtype4" "subtype4"
 [43] "subtype4" "subtype4" "subtype3" "subtype4" "subtype4" "subtype4"
 [49] "subtype4" "subtype1" "subtype2" "subtype4" "subtype4" "subtype4"
 [55] "subtype4" "subtype3" "subtype4" "subtype1" "subtype3" "subtype4"
 [61] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
 [67] "subtype3" "subtype3" "subtype1" "subtype4" "subtype4" "subtype3"
 [73] "subtype3" "subtype2" "subtype4" "subtype3" "subtype3" "subtype4"
 [79] "subtype3" "subtype4" "subtype4" "subtype4" "subtype3" "subtype1"
 [85] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
 [91] "subtype3" "subtype3" "subtype4" "subtype3" "subtype3" "subtype2"
 [97] "subtype2" "subtype1" "subtype4" "subtype4" "subtype1" "subtype4"
[103] "subtype3" "subtype3" "subtype4" "subtype4" "subtype4" "subtype2"
[109] "subtype4" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
[115] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype4"
[121] "subtype4" "subtype4" "subtype3" "subtype4" "subtype4" "subtype4"
[127] "subtype4" "subtype1" "subtype4" "subtype4" "subtype2" "subtype2"
[133] "subtype1" "subtype3" "subtype2" "subtype4" "subtype3" "subtype1"
[139] "subtype2" "subtype2" "subtype4" "subtype4" "subtype1" "subtype1"
[145] "subtype4" "subtype4" "subtype4" "subtype1" "subtype2" "subtype3"
[151] "subtype4" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype4" "subtype3" "subtype2" "subtype4" "subtype1" "subtype2"
[163] "subtype4" "subtype2" "subtype1" "subtype2" "subtype4" "subtype4"
[169] "subtype2" "subtype3" "subtype4" "subtype1" "subtype4" "subtype1"
[175] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype4"
[181] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype4"
[187] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
[193] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[199] "subtype2" "subtype2" "subtype1" "subtype2" "subtype4" "subtype1"
[205] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[211] "subtype3" "subtype4" "subtype4" "subtype2" "subtype2" "subtype1"
[217] "subtype4" "subtype4" "subtype2" "subtype4" "subtype1" "subtype2"
[223] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype4"
[229] "subtype2" "subtype3" "subtype3" "subtype4" "subtype2" "subtype4"
[235] "subtype1" "subtype3" "subtype2" "subtype1" "subtype4" "subtype2"
[241] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype4"
[247] "subtype3" "subtype2" "subtype4" "subtype1" "subtype2" "subtype4"
[253] "subtype3" "subtype1" "subtype2" "subtype4" "subtype2" "subtype3"
[259] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[265] "subtype4" "subtype4" "subtype4" "subtype1" "subtype2" "subtype2"
[271] "subtype2" "subtype3" "subtype4" "subtype3" "subtype4" "subtype2"
[277] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype4"
[283] "subtype2" "subtype2" "subtype2" "subtype3" "subtype4" "subtype2"
[289] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype4"
[295] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[301] "subtype1" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[307] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
[313] "subtype2" "subtype3" "subtype4" "subtype4" "subtype1" "subtype4"
[319] "subtype4" "subtype4" "subtype3" "subtype4" "subtype4" "subtype3"
[325] "subtype2" "subtype4" "subtype4" "subtype3" "subtype4" "subtype3"
[331] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype1"
[337] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype4"
[343] "subtype3" "subtype4" "subtype4" "subtype4" "subtype3" "subtype4"
[349] "subtype4" "subtype2" "subtype4" "subtype4" "subtype3" "subtype4"
[355] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[361] "subtype4" "subtype4" "subtype4" "subtype4" "subtype2" "subtype4"
[367] "subtype4"
D8V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      65
  subtype2                                      97
  subtype3                                      60
  subtype4                                      80
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             0                                 0
  subtype2                             1                                 0
  subtype3                             2                                 3
  subtype4                             7                                54
D8V3, multiclass
D8V4, binary
          cls
clus        0  1
  subtype1 18 47
  subtype2 25 73
  subtype3 33 32
  subtype4 47 94
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   18   47
  subtype2   25   73
  subtype3   33   32
  subtype4   47   94
     clus
vv    subtype1 subtype2 subtype3 subtype4
  NO        18       25       33       47
  YES       47       73       32       94
          vv
clus       R0 R1 R2 RX
  subtype1 48  4  1  4
  subtype2 72  1  1  7
  subtype3 47  5  2  2
  subtype4 94 11  8  9
D8V5, multiclass

Clustering(9) Variable = MIRSEQ_CNMF
D9V1, survival
          sevent
clus2        0   1
  subtype1 132  23
  subtype2 143   3
  subtype3 123  13
subtype1 subtype2 subtype3 
     155      146      136 
subtype1 subtype2 subtype3 
      23        3       13 
$subtype1
TCGA-A5-A0G1 TCGA-A5-A0G2 TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0GH TCGA-A5-A0GR 
      106.88       133.25        35.47        25.97        54.94        25.64 
TCGA-A5-A1OF TCGA-A5-A1OG TCGA-A5-A2K2 TCGA-A5-A2K3 TCGA-A5-A2K4 TCGA-A5-A2K5 
        7.92        11.44        91.00        46.32        28.64         5.29 
TCGA-A5-A2K7 TCGA-A5-A3LO TCGA-A5-A3LP TCGA-AJ-A23M TCGA-AJ-A2QM TCGA-AJ-A2QO 
        5.13         7.33         7.56         1.02         1.02         2.99 
TCGA-AJ-A3BD TCGA-AJ-A3BF TCGA-AJ-A3EJ TCGA-AJ-A3EK TCGA-AJ-A3EL TCGA-AJ-A3EM 
        0.49         1.12         1.64         2.10         2.14         1.64 
TCGA-AJ-A3IA TCGA-AJ-A3NF TCGA-AJ-A3NG TCGA-AJ-A3OJ TCGA-AP-A053 TCGA-AP-A059 
        0.92         1.35         1.71         1.94         5.95         8.22 
TCGA-AP-A0L8 TCGA-AP-A0L9 TCGA-AP-A0LF TCGA-AP-A0LI TCGA-AP-A0LM TCGA-AP-A1DQ 
       48.79       113.19         3.39        85.55        27.12        38.93 
TCGA-AP-A1E3 TCGA-AP-A1E4 TCGA-AP-A3K1 TCGA-AX-A06B TCGA-AX-A06F TCGA-AX-A0IU 
       17.19         8.78        18.25        53.88        51.09        28.54 
TCGA-AX-A0IW TCGA-AX-A1C7 TCGA-AX-A1C8 TCGA-AX-A1CA TCGA-AX-A1CC TCGA-AX-A1CF 
       37.74        16.93        13.55        20.28        12.43        76.83 
TCGA-AX-A1CP TCGA-AX-A1CR TCGA-AX-A2H2 TCGA-AX-A2H4 TCGA-AX-A2H5 TCGA-AX-A2H8 
       36.39        11.08         4.77        30.08        71.24        61.18 
TCGA-AX-A2HF TCGA-AX-A2HG TCGA-AX-A2HH TCGA-AX-A2HK TCGA-AX-A2IN TCGA-AX-A2IO 
       16.08        21.70        17.72         2.96        31.10        38.66 
TCGA-AX-A3FS TCGA-AX-A3FT TCGA-AX-A3G1 TCGA-AX-A3G3 TCGA-AX-A3G4 TCGA-AX-A3G7 
        0.23         0.10        20.52         0.03         0.13         0.23 
TCGA-AX-A3G9 TCGA-AX-A3GI TCGA-B5-A0K3 TCGA-B5-A0K8 TCGA-B5-A11H TCGA-B5-A11L 
        8.35         0.13        23.01        17.82        76.18        45.90 
TCGA-B5-A11U TCGA-B5-A1MR TCGA-B5-A1MU TCGA-B5-A1MW TCGA-B5-A1MY TCGA-B5-A1N2 
        8.91       187.07        50.86         7.23        11.87        12.79 
TCGA-BG-A0M6 TCGA-BG-A0YV TCGA-BG-A221 TCGA-BG-A2AE TCGA-BK-A139 TCGA-BK-A26L 
        7.92         6.12         1.51         0.53         7.86         7.66 
TCGA-BS-A0TE TCGA-BS-A0TJ TCGA-BS-A0U9 TCGA-BS-A0UF TCGA-BS-A0V8 TCGA-D1-A0ZP 
        4.80        49.78        57.50        60.59        49.55        22.68 
TCGA-D1-A0ZS TCGA-D1-A0ZZ TCGA-D1-A15V TCGA-D1-A15X TCGA-D1-A167 TCGA-D1-A168 
        4.83        12.39        33.27        29.88        15.72        30.02 
TCGA-D1-A16G TCGA-D1-A16I TCGA-D1-A16J TCGA-D1-A16S TCGA-D1-A16V TCGA-D1-A17C 
       27.42        11.47        24.39         7.82         1.41         0.03 
TCGA-D1-A17H TCGA-D1-A1NU TCGA-D1-A1NW TCGA-D1-A1NX TCGA-D1-A2G0 TCGA-D1-A2G7 
       14.93        10.22         0.72        13.12         3.52        44.88 
TCGA-D1-A3DA TCGA-D1-A3DG TCGA-D1-A3DH TCGA-DI-A1BU TCGA-DI-A1NN TCGA-DI-A1NO 
        0.26         4.27         4.11        33.04        31.00         9.37 
TCGA-DI-A2QT TCGA-DI-A2QU TCGA-DI-A2QY TCGA-E6-A1LZ TCGA-E6-A2P8 TCGA-EC-A1QX 
       12.39        31.10        91.96        42.38         2.37         2.17 
TCGA-EO-A1Y5 TCGA-EO-A1Y8 TCGA-EO-A22T TCGA-EO-A2CG TCGA-EO-A2CH TCGA-EO-A3AS 
       10.92        10.78        33.01        22.09        19.40        34.39 
TCGA-EO-A3AY TCGA-EY-A1G7 TCGA-EY-A1GC TCGA-EY-A1GJ TCGA-EY-A1GM TCGA-EY-A1GO 
       12.89         6.21         4.54        16.77         6.87        11.84 
TCGA-EY-A1GP TCGA-EY-A1GS TCGA-EY-A1GT TCGA-EY-A1GV TCGA-EY-A210 TCGA-EY-A212 
       11.44         9.34         9.86         8.45         5.42         3.58 
TCGA-EY-A214 TCGA-EY-A215 TCGA-EY-A2ON TCGA-EY-A2OQ TCGA-FI-A2CX TCGA-FI-A2CY 
        8.28        12.85         5.62         9.63        40.01        34.98 
TCGA-FI-A2D0 TCGA-FI-A2D2 TCGA-FI-A2D5 TCGA-FI-A2D6 TCGA-FI-A2EU TCGA-FI-A2EW 
       33.99        36.00        14.01         8.98        84.07        59.01 
TCGA-FI-A2EX TCGA-FI-A2EY TCGA-FI-A2F8 TCGA-FI-A2F9 TCGA-H5-A2HR 
        9.07        29.03        25.02        26.01         1.74 

$subtype2
TCGA-A5-A0GD TCGA-A5-A0GE TCGA-A5-A0GG TCGA-A5-A0GJ TCGA-A5-A0GM TCGA-A5-A0GQ 
        3.19        89.33        82.72        47.57        47.61        38.37 
TCGA-A5-A0GX TCGA-A5-A0R6 TCGA-A5-A0R8 TCGA-A5-A0R9 TCGA-A5-A0RA TCGA-A5-A0VO 
       30.38        12.13         4.11         9.67        18.25         4.21 
TCGA-A5-A0VP TCGA-A5-A1OJ TCGA-A5-A1OK TCGA-AJ-A2QK TCGA-AJ-A2QL TCGA-AJ-A2QN 
       30.48         9.60         7.99         0.39         1.61         2.01 
TCGA-AJ-A3BI TCGA-AJ-A3BK TCGA-AJ-A3I9 TCGA-AJ-A3OK TCGA-AP-A05O TCGA-AP-A0LJ 
        2.01         1.68         1.28         4.67        12.20        31.73 
TCGA-AP-A0LP TCGA-AP-A0LS TCGA-AP-A1DK TCGA-AP-A1DP TCGA-AP-A1DV TCGA-AX-A05S 
       61.64        54.84        54.25        35.54         6.71        13.58 
TCGA-AX-A05T TCGA-AX-A05W TCGA-AX-A05Y TCGA-AX-A06H TCGA-AX-A06L TCGA-AX-A1C9 
       19.82        68.32        72.03        27.39        48.62        15.25 
TCGA-AX-A1CE TCGA-AX-A1CJ TCGA-AX-A2H7 TCGA-AX-A2HJ TCGA-AX-A3FW TCGA-AX-A3FX 
       20.05        54.08        33.53        27.32         0.33         0.13 
TCGA-AX-A3GB TCGA-B5-A0JS TCGA-B5-A0JT TCGA-B5-A0JX TCGA-B5-A0K1 TCGA-B5-A0K2 
       14.47        40.80        43.13        44.71        24.53        22.42 
TCGA-B5-A0KB TCGA-B5-A11G TCGA-B5-A11J TCGA-B5-A11M TCGA-B5-A11N TCGA-B5-A11O 
        4.08       101.13        42.44        36.72        37.71        33.99 
TCGA-B5-A11P TCGA-B5-A11Q TCGA-B5-A11R TCGA-B5-A11S TCGA-B5-A11W TCGA-B5-A11Y 
       36.82        23.08        27.52        21.37        11.15        10.36 
TCGA-B5-A121 TCGA-B5-A1MV TCGA-B5-A1MX TCGA-B5-A3FC TCGA-BG-A0M0 TCGA-BG-A0M2 
        8.52        12.49         5.72        62.14         7.79        10.39 
TCGA-BG-A0M7 TCGA-BG-A0M8 TCGA-BG-A0M9 TCGA-BG-A0MA TCGA-BG-A0MC TCGA-BG-A0MH 
       22.95        22.68        25.15        10.72        27.19        44.09 
TCGA-BG-A0MT TCGA-BG-A0VV TCGA-BG-A0VW TCGA-BG-A0VX TCGA-BG-A0VZ TCGA-BG-A0W1 
        7.89         8.55         4.31        16.11        28.54        29.82 
TCGA-BG-A0YU TCGA-BG-A187 TCGA-BG-A18A TCGA-BG-A18B TCGA-BG-A2L7 TCGA-BK-A0C9 
        9.17         7.59         8.28         5.10         5.82         9.50 
TCGA-BK-A0CA TCGA-BK-A13C TCGA-BS-A0TC TCGA-BS-A0TD TCGA-BS-A0UA TCGA-BS-A0UL 
       12.20         6.64        74.30        65.82        83.51         1.18 
TCGA-BS-A0UM TCGA-BS-A0UV TCGA-BS-A0V6 TCGA-BS-A0V7 TCGA-D1-A0ZO TCGA-D1-A0ZQ 
       72.03         4.90        54.25        46.98         2.27         0.26 
TCGA-D1-A0ZR TCGA-D1-A0ZU TCGA-D1-A0ZV TCGA-D1-A101 TCGA-D1-A103 TCGA-D1-A15W 
        0.56        19.00        11.51         1.74        15.78        30.08 
TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A165 TCGA-D1-A169 TCGA-D1-A16B TCGA-D1-A16D 
       29.33        32.09         0.66        29.75        24.46        29.85 
TCGA-D1-A16E TCGA-D1-A16F TCGA-D1-A16O TCGA-D1-A16Q TCGA-D1-A16X TCGA-D1-A174 
       29.88         2.63        28.41         7.27         3.65        10.65 
TCGA-D1-A175 TCGA-D1-A176 TCGA-D1-A17A TCGA-D1-A17B TCGA-D1-A17D TCGA-D1-A17F 
        6.64        16.64         0.62         6.97         5.26         1.28 
TCGA-D1-A17L TCGA-D1-A17N TCGA-D1-A17Q TCGA-D1-A17S TCGA-D1-A17T TCGA-D1-A17U 
       15.09         1.51         1.78        10.72         2.30        13.02 
TCGA-D1-A1NS TCGA-D1-A1NZ TCGA-D1-A1O0 TCGA-D1-A1O5 TCGA-D1-A1O7 TCGA-D1-A2G5 
        1.41         0.26         0.07        12.39         1.05        41.42 
TCGA-DI-A1BY TCGA-E6-A2P9 TCGA-EC-A24G TCGA-EO-A1Y7 TCGA-EO-A22Y TCGA-EY-A1GE 
       36.62         6.64         1.51         7.99        25.02        18.15 
TCGA-EY-A1GF TCGA-EY-A1GH TCGA-EY-A1GI TCGA-EY-A1GK TCGA-EY-A1GW TCGA-EY-A1GX 
       17.49        17.33        16.64        16.54         8.55         5.46 
TCGA-EY-A1H0 TCGA-FI-A2F4 
       11.15        28.93 

$subtype3
TCGA-A5-A0G9 TCGA-A5-A0GA TCGA-A5-A0GI TCGA-A5-A0GP TCGA-A5-A0GU TCGA-A5-A0GV 
       71.18        17.85        57.53        35.74        16.27        15.95 
TCGA-A5-A0GW TCGA-A5-A0R7 TCGA-A5-A0VQ TCGA-AJ-A23O TCGA-AJ-A3BG TCGA-AJ-A3NC 
       12.66         1.32         5.82         1.97         1.02         6.90 
TCGA-AJ-A3NE TCGA-AP-A051 TCGA-AP-A054 TCGA-AP-A05P TCGA-AP-A0LD TCGA-AP-A0LE 
        2.56        83.67        23.31         8.55        95.54        98.17 
TCGA-AP-A0LG TCGA-AP-A0LH TCGA-AP-A0LL TCGA-AP-A0LN TCGA-AP-A0LQ TCGA-AP-A0LT 
       63.16        36.36        70.39        65.49        62.66        38.96 
TCGA-AP-A0LV TCGA-AP-A1DH TCGA-AP-A1DM TCGA-AP-A1DO TCGA-AP-A1DR TCGA-AP-A1E0 
       12.66        59.70        43.69        31.30        37.18        22.72 
TCGA-AP-A1E1 TCGA-AW-A1PO TCGA-AX-A05U TCGA-AX-A05Z TCGA-AX-A060 TCGA-AX-A062 
       10.42         0.56        29.65        46.45        35.34        45.96 
TCGA-AX-A063 TCGA-AX-A064 TCGA-AX-A06D TCGA-AX-A06J TCGA-AX-A0IS TCGA-AX-A0IZ 
       66.54        34.98        12.26        30.02        35.01        43.82 
TCGA-AX-A0J0 TCGA-AX-A0J1 TCGA-AX-A1C4 TCGA-AX-A1C5 TCGA-AX-A1CI TCGA-AX-A1CK 
       40.08        65.88        13.28        19.20        72.56        67.46 
TCGA-AX-A1CN TCGA-AX-A2HA TCGA-AX-A2HC TCGA-AX-A2HD TCGA-AX-A3FZ TCGA-AX-A3G8 
       25.12        68.71        33.40        40.50         0.20         1.18 
TCGA-B5-A0JN TCGA-B5-A0JU TCGA-B5-A0JV TCGA-B5-A0JY TCGA-B5-A0JZ TCGA-B5-A0K0 
       67.99        48.76        36.99        26.99        22.65        22.32 
TCGA-B5-A0K4 TCGA-B5-A0K6 TCGA-B5-A0K7 TCGA-B5-A0K9 TCGA-B5-A11E TCGA-B5-A11F 
       15.32        14.01        12.23         5.46         8.71       173.56 
TCGA-B5-A11I TCGA-B5-A11V TCGA-B5-A11X TCGA-B5-A11Z TCGA-B5-A1MZ TCGA-BG-A0LW 
       67.00         7.59        11.08         9.57        15.29         6.38 
TCGA-BG-A0LX TCGA-BG-A0M3 TCGA-BG-A0M4 TCGA-BG-A0MG TCGA-BG-A0MI TCGA-BG-A0MO 
        8.28        24.39        15.78        29.46        23.47        33.57 
TCGA-BG-A0MQ TCGA-BG-A0MS TCGA-BG-A0MU TCGA-BG-A0RY TCGA-BG-A0VT TCGA-BG-A0W2 
       25.02        18.18         7.59         4.21         7.36        37.84 
TCGA-BG-A186 TCGA-BG-A18C TCGA-BG-A222 TCGA-BK-A0CC TCGA-BK-A13B TCGA-BS-A0T9 
        7.56         5.56         0.46         6.94        19.00        46.95 
TCGA-BS-A0TA TCGA-BS-A0TG TCGA-BS-A0TI TCGA-BS-A0U5 TCGA-BS-A0U7 TCGA-BS-A0U8 
       23.47        66.87        47.44        72.46        30.71        85.68 
TCGA-BS-A0UJ TCGA-BS-A0UT TCGA-BS-A0V4 TCGA-BS-A0VI TCGA-BS-A0WQ TCGA-D1-A0ZN 
        0.89        19.56         1.02        54.61        39.68        16.83 
TCGA-D1-A102 TCGA-D1-A15Z TCGA-D1-A160 TCGA-D1-A163 TCGA-D1-A16N TCGA-D1-A16R 
        1.41         1.91         3.68        30.84        21.04         0.69 
TCGA-D1-A16Y TCGA-D1-A177 TCGA-D1-A179 TCGA-D1-A17K TCGA-D1-A17M TCGA-D1-A17R 
       17.49        11.41         6.77        14.10        10.22        13.15 
TCGA-D1-A1NY TCGA-D1-A1O8 TCGA-D1-A2G6 TCGA-DI-A0WH TCGA-DI-A1C3 TCGA-E6-A1LX 
       13.02         3.95         8.48        13.32        24.30        23.38 
TCGA-E6-A1M0 TCGA-EO-A22R TCGA-EO-A22S TCGA-EO-A22U TCGA-EO-A22X TCGA-EO-A3AU 
       14.04        31.96        35.05        27.12        32.25        19.36 
TCGA-EY-A1G8 TCGA-EY-A1GD TCGA-EY-A1GL TCGA-EY-A1GQ TCGA-EY-A1GR TCGA-EY-A1GU 
       14.96         8.15        13.94        11.18        11.31         8.52 
TCGA-EY-A2OM TCGA-EY-A2OO TCGA-EY-A2OP TCGA-FI-A2D4 
        7.73        25.45        16.54         7.96 

subtype1 subtype2 subtype3 
    0.03     0.07     0.20 
subtype1 subtype2 subtype3 
  187.07   101.13   173.56 
subtype1 subtype2 subtype3 
   12.43    14.78    19.46 
[1] "0.0 - 187.1 (12.4)" "0.1 - 101.1 (14.8)" "0.2 - 173.6 (19.5)"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
 [13] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [19] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
 [31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [37] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [43] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [49] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
 [55] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [61] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [67] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
 [79] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [85] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
 [91] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
 [97] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[103] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[109] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[115] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[121] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[127] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[133] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[139] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[145] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[157] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[163] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[169] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[175] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[181] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[187] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[199] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[205] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[211] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[217] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[223] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[229] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[235] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[253] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[259] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[265] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[271] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[277] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[289] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[307] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[313] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[319] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[325] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[331] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[343] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[349] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[355] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[361] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[367] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[373] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[379] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[385] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[391] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
[397] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[403] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[409] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[415] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[421] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[427] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[433] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
 [13] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [19] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
 [31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [37] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [43] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [49] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
 [55] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [61] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [67] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
 [79] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [85] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
 [91] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
 [97] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[103] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[109] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[115] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[121] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[127] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[133] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[139] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[145] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[157] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[163] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[169] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[175] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[181] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[187] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[199] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[205] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[211] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[217] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[223] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[229] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[235] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[253] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[259] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[265] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[271] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[277] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[289] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[307] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[313] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[319] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[325] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[331] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[343] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[349] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[355] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[361] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[367] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[373] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[379] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[385] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[391] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
[397] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[403] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[409] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[415] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[421] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[427] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[433] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
 [13] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [19] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
 [31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [37] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [43] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [49] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
 [55] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [61] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [67] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
 [79] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [85] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
 [91] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
 [97] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[103] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[109] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[115] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[121] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[127] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[133] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[139] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[145] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[157] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[163] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[169] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[175] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[181] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[187] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[199] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[205] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[211] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[217] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[223] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[229] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[235] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[253] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[259] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[265] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[271] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[277] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[289] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[307] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[313] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[319] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[325] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[331] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[343] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[349] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[355] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[361] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[367] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[373] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[379] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[385] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[391] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
[397] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[403] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[409] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[415] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[421] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[427] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[433] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
D9V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      75
  subtype2                                     144
  subtype3                                     130
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                            14                                69
  subtype2                             1                                 2
  subtype3                             3                                 4
D9V3, multiclass
D9V4, binary
          cls
clus         0   1
  subtype1  42 116
  subtype2  39 108
  subtype3  46  91
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   42  116
  subtype2   39  108
  subtype3   46   91
     clus
vv    subtype1 subtype2 subtype3
  NO        42       39       46
  YES      116      108       91
          vv
clus        R0  R1  R2  RX
  subtype1 104  11   9   8
  subtype2 106   4   2   9
  subtype3  92   9   3   7
D9V5, multiclass

Clustering(10) Variable = MIRSEQ_CHIERARCHICAL
D10V1, survival
          sevent
clus2        0   1
  subtype1  49   1
  subtype2  97  20
  subtype3  69   5
  subtype4  16   4
  subtype5  29   5
  subtype6 138   4
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      50      117       74       20       34      142 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
       1       20        5        4        5        4 
$subtype1
TCGA-A5-A0GP TCGA-A5-A0VQ TCGA-A5-A2K7 TCGA-A5-A3LO TCGA-AJ-A23O TCGA-AJ-A3BG 
       35.74         5.82         5.13         7.33         1.97         1.02 
TCGA-AP-A053 TCGA-AP-A0LD TCGA-AP-A0LE TCGA-AP-A0LG TCGA-AP-A0LT TCGA-AP-A1DM 
        5.95        95.54        98.17        63.16        38.96        43.69 
TCGA-AP-A1DO TCGA-AP-A1DR TCGA-AX-A05S TCGA-AX-A060 TCGA-AX-A063 TCGA-AX-A064 
       31.30        37.18        13.58        35.34        66.54        34.98 
TCGA-AX-A0IZ TCGA-AX-A1CI TCGA-AX-A2HD TCGA-AX-A2HH TCGA-AX-A3G8 TCGA-AX-A3G9 
       43.82        72.56        40.50        17.72         1.18         8.35 
TCGA-B5-A0JN TCGA-B5-A0JU TCGA-B5-A0JZ TCGA-BG-A0MQ TCGA-BG-A221 TCGA-BG-A222 
       67.99        48.76        22.65        25.02         1.51         0.46 
TCGA-BS-A0TJ TCGA-BS-A0V4 TCGA-BS-A0VI TCGA-D1-A163 TCGA-D1-A167 TCGA-D1-A16V 
       49.78         1.02        54.61        30.84        15.72         1.41 
TCGA-D1-A177 TCGA-D1-A17M TCGA-D1-A1NY TCGA-E6-A1LX TCGA-EO-A22R TCGA-EO-A22S 
       11.41        10.22        13.02        23.38        31.96        35.05 
TCGA-EO-A3AS TCGA-EO-A3AU TCGA-EO-A3AY TCGA-EY-A1GC TCGA-EY-A1GT TCGA-EY-A1GU 
       34.39        19.36        12.89         4.54         9.86         8.52 
TCGA-EY-A2OQ TCGA-FI-A2D0 
        9.63        33.99 

$subtype2
TCGA-A5-A0G1 TCGA-A5-A0G2 TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0GA TCGA-A5-A0GH 
      106.88       133.25        35.47        25.97        17.85        54.94 
TCGA-A5-A0GR TCGA-A5-A1OG TCGA-A5-A2K2 TCGA-A5-A2K3 TCGA-A5-A2K4 TCGA-A5-A3LP 
       25.64        11.44        91.00        46.32        28.64         7.56 
TCGA-AJ-A23M TCGA-AJ-A2QM TCGA-AJ-A3BD TCGA-AJ-A3BF TCGA-AJ-A3EK TCGA-AJ-A3EL 
        1.02         1.02         0.49         1.12         2.10         2.14 
TCGA-AJ-A3EM TCGA-AJ-A3IA TCGA-AJ-A3NF TCGA-AJ-A3OJ TCGA-AP-A059 TCGA-AP-A0L8 
        1.64         0.92         1.35         1.94         8.22        48.79 
TCGA-AP-A0LF TCGA-AP-A0LH TCGA-AP-A0LI TCGA-AP-A1DQ TCGA-AP-A1E4 TCGA-AP-A3K1 
        3.39        36.36        85.55        38.93         8.78        18.25 
TCGA-AX-A06F TCGA-AX-A0IU TCGA-AX-A0IW TCGA-AX-A1C7 TCGA-AX-A1C8 TCGA-AX-A1CA 
       51.09        28.54        37.74        16.93        13.55        20.28 
TCGA-AX-A1CC TCGA-AX-A1CP TCGA-AX-A1CR TCGA-AX-A2H2 TCGA-AX-A2H4 TCGA-AX-A2H5 
       12.43        36.39        11.08         4.77        30.08        71.24 
TCGA-AX-A2HF TCGA-AX-A2HG TCGA-AX-A2HK TCGA-AX-A2IN TCGA-AX-A2IO TCGA-AX-A3FT 
       16.08        21.70         2.96        31.10        38.66         0.10 
TCGA-AX-A3G3 TCGA-AX-A3G4 TCGA-AX-A3G7 TCGA-AX-A3GI TCGA-B5-A0K3 TCGA-B5-A0K8 
        0.03         0.13         0.23         0.13        23.01        17.82 
TCGA-B5-A0K9 TCGA-B5-A11I TCGA-B5-A1MR TCGA-B5-A1MU TCGA-B5-A1MY TCGA-B5-A1N2 
        5.46        67.00       187.07        50.86        11.87        12.79 
TCGA-BG-A0M4 TCGA-BG-A0M6 TCGA-BG-A2AE TCGA-BK-A0CC TCGA-BK-A26L TCGA-BS-A0TE 
       15.78         7.92         0.53         6.94         7.66         4.80 
TCGA-BS-A0UF TCGA-D1-A0ZP TCGA-D1-A0ZS TCGA-D1-A0ZZ TCGA-D1-A15V TCGA-D1-A15X 
       60.59        22.68         4.83        12.39        33.27        29.88 
TCGA-D1-A16G TCGA-D1-A16I TCGA-D1-A16J TCGA-D1-A16S TCGA-D1-A16Y TCGA-D1-A179 
       27.42        11.47        24.39         7.82        17.49         6.77 
TCGA-D1-A1NU TCGA-D1-A1NW TCGA-D1-A2G0 TCGA-D1-A2G6 TCGA-D1-A2G7 TCGA-D1-A3DG 
       10.22         0.72         3.52         8.48        44.88         4.27 
TCGA-D1-A3DH TCGA-DI-A1BU TCGA-DI-A1NN TCGA-DI-A2QT TCGA-DI-A2QY TCGA-E6-A1LZ 
        4.11        33.04        31.00        12.39        91.96        42.38 
TCGA-E6-A2P8 TCGA-EC-A1QX TCGA-EO-A1Y5 TCGA-EO-A1Y8 TCGA-EO-A22T TCGA-EO-A2CG 
        2.37         2.17        10.92        10.78        33.01        22.09 
TCGA-EY-A1G7 TCGA-EY-A1GJ TCGA-EY-A1GM TCGA-EY-A1GO TCGA-EY-A1GP TCGA-EY-A1GS 
        6.21        16.77         6.87        11.84        11.44         9.34 
TCGA-EY-A1GV TCGA-EY-A210 TCGA-EY-A212 TCGA-EY-A2ON TCGA-FI-A2CX TCGA-FI-A2CY 
        8.45         5.42         3.58         5.62        40.01        34.98 
TCGA-FI-A2D2 TCGA-FI-A2D6 TCGA-FI-A2EU TCGA-FI-A2EW TCGA-FI-A2EX TCGA-FI-A2EY 
       36.00         8.98        84.07        59.01         9.07        29.03 
TCGA-FI-A2F8 TCGA-FI-A2F9 TCGA-H5-A2HR 
       25.02        26.01         1.74 

$subtype3
TCGA-A5-A0GI TCGA-A5-A0GJ TCGA-A5-A0GM TCGA-A5-A0GU TCGA-A5-A0GV TCGA-A5-A0GX 
       57.53        47.57        47.61        16.27        15.95        30.38 
TCGA-AJ-A3NC TCGA-AP-A051 TCGA-AP-A05P TCGA-AP-A0LJ TCGA-AP-A0LL TCGA-AP-A0LM 
        6.90        83.67         8.55        31.73        70.39        27.12 
TCGA-AP-A0LN TCGA-AP-A0LV TCGA-AP-A1E0 TCGA-AP-A1E3 TCGA-AX-A05T TCGA-AX-A05U 
       65.49        12.66        22.72        17.19        19.82        29.65 
TCGA-AX-A05Z TCGA-AX-A062 TCGA-AX-A06B TCGA-AX-A0IS TCGA-AX-A1C4 TCGA-AX-A1CK 
       46.45        45.96        53.88        35.01        13.28        67.46 
TCGA-AX-A2HA TCGA-AX-A3GB TCGA-B5-A0K0 TCGA-B5-A0K6 TCGA-B5-A0K7 TCGA-B5-A11F 
       68.71        14.47        22.32        14.01        12.23       173.56 
TCGA-B5-A11L TCGA-B5-A11V TCGA-B5-A11Z TCGA-B5-A1MZ TCGA-BG-A0LW TCGA-BG-A0M3 
       45.90         7.59         9.57        15.29         6.38        24.39 
TCGA-BG-A0M8 TCGA-BG-A0MI TCGA-BG-A0MO TCGA-BG-A0MS TCGA-BG-A0MU TCGA-BG-A0VT 
       22.68        23.47        33.57        18.18         7.59         7.36 
TCGA-BG-A0VX TCGA-BG-A0W2 TCGA-BG-A186 TCGA-BK-A13B TCGA-BS-A0T9 TCGA-BS-A0TG 
       16.11        37.84         7.56        19.00        46.95        66.87 
TCGA-BS-A0TI TCGA-BS-A0U7 TCGA-BS-A0U8 TCGA-BS-A0UJ TCGA-BS-A0UL TCGA-BS-A0UT 
       47.44        30.71        85.68         0.89         1.18        19.56 
TCGA-BS-A0V7 TCGA-BS-A0WQ TCGA-D1-A0ZN TCGA-D1-A0ZQ TCGA-D1-A0ZU TCGA-D1-A101 
       46.98        39.68        16.83         0.26        19.00         1.74 
TCGA-D1-A102 TCGA-D1-A103 TCGA-D1-A160 TCGA-D1-A16Q TCGA-D1-A16R TCGA-D1-A17C 
        1.41        15.78         3.68         7.27         0.69         0.03 
TCGA-D1-A17H TCGA-D1-A17R TCGA-D1-A1O8 TCGA-DI-A1C3 TCGA-EY-A1GD TCGA-EY-A1GI 
       14.93        13.15         3.95        24.30         8.15        16.64 
TCGA-EY-A1GL TCGA-EY-A1GQ 
       13.94        11.18 

$subtype4
TCGA-A5-A0GW TCGA-A5-A0VP TCGA-A5-A2K5 TCGA-AP-A0LS TCGA-AP-A1DH TCGA-AW-A1PO 
       12.66        30.48         5.29        54.84        59.70         0.56 
TCGA-B5-A0K4 TCGA-B5-A11E TCGA-B5-A1MW TCGA-B5-A1MX TCGA-BG-A0LX TCGA-BS-A0U9 
       15.32         8.71         7.23         5.72         8.28        57.50 
TCGA-BS-A0UV TCGA-D1-A168 TCGA-D1-A16N TCGA-DI-A2QU TCGA-EY-A1G8 TCGA-EY-A215 
        4.90        30.02        21.04        31.10        14.96        12.85 
TCGA-FI-A2D4 TCGA-FI-A2D5 
        7.96        14.01 

$subtype5
TCGA-A5-A0R7 TCGA-AJ-A3EJ TCGA-AJ-A3NE TCGA-AP-A054 TCGA-AP-A0L9 TCGA-AX-A06D 
        1.32         1.64         2.56        23.31       113.19        12.26 
TCGA-AX-A0J0 TCGA-AX-A0J1 TCGA-AX-A1CF TCGA-AX-A1CN TCGA-AX-A2HC TCGA-AX-A3FS 
       40.08        65.88        76.83        25.12        33.40         0.23 
TCGA-AX-A3FZ TCGA-B5-A0JY TCGA-B5-A11H TCGA-B5-A11U TCGA-B5-A11X TCGA-BG-A0YV 
        0.20        26.99        76.18         8.91        11.08         6.12 
TCGA-BG-A18C TCGA-BK-A139 TCGA-BS-A0V8 TCGA-D1-A15Z TCGA-D1-A17K TCGA-D1-A3DA 
        5.56         7.86        49.55         1.91        14.10         0.26 
TCGA-DI-A0WH TCGA-DI-A1NO TCGA-E6-A1M0 TCGA-EO-A22U TCGA-EO-A22X TCGA-EY-A1GR 
       13.32         9.37        14.04        27.12        32.25        11.31 
TCGA-EY-A214 TCGA-EY-A2OM TCGA-EY-A2OO TCGA-EY-A2OP 
        8.28         7.73        25.45        16.54 

$subtype6
TCGA-A5-A0G9 TCGA-A5-A0GD TCGA-A5-A0GE TCGA-A5-A0GG TCGA-A5-A0GQ TCGA-A5-A0R6 
       71.18         3.19        89.33        82.72        38.37        12.13 
TCGA-A5-A0R8 TCGA-A5-A0R9 TCGA-A5-A0RA TCGA-A5-A0VO TCGA-A5-A1OF TCGA-A5-A1OJ 
        4.11         9.67        18.25         4.21         7.92         9.60 
TCGA-A5-A1OK TCGA-AJ-A2QK TCGA-AJ-A2QL TCGA-AJ-A2QN TCGA-AJ-A2QO TCGA-AJ-A3BI 
        7.99         0.39         1.61         2.01         2.99         2.01 
TCGA-AJ-A3BK TCGA-AJ-A3I9 TCGA-AJ-A3NG TCGA-AJ-A3OK TCGA-AP-A05O TCGA-AP-A0LP 
        1.68         1.28         1.71         4.67        12.20        61.64 
TCGA-AP-A0LQ TCGA-AP-A1DK TCGA-AP-A1DP TCGA-AP-A1DV TCGA-AP-A1E1 TCGA-AX-A05W 
       62.66        54.25        35.54         6.71        10.42        68.32 
TCGA-AX-A05Y TCGA-AX-A06H TCGA-AX-A06J TCGA-AX-A06L TCGA-AX-A1C5 TCGA-AX-A1C9 
       72.03        27.39        30.02        48.62        19.20        15.25 
TCGA-AX-A1CE TCGA-AX-A1CJ TCGA-AX-A2H7 TCGA-AX-A2H8 TCGA-AX-A2HJ TCGA-AX-A3FW 
       20.05        54.08        33.53        61.18        27.32         0.33 
TCGA-AX-A3FX TCGA-AX-A3G1 TCGA-B5-A0JS TCGA-B5-A0JT TCGA-B5-A0JV TCGA-B5-A0JX 
        0.13        20.52        40.80        43.13        36.99        44.71 
TCGA-B5-A0K1 TCGA-B5-A0K2 TCGA-B5-A0KB TCGA-B5-A11G TCGA-B5-A11J TCGA-B5-A11M 
       24.53        22.42         4.08       101.13        42.44        36.72 
TCGA-B5-A11N TCGA-B5-A11O TCGA-B5-A11P TCGA-B5-A11Q TCGA-B5-A11R TCGA-B5-A11S 
       37.71        33.99        36.82        23.08        27.52        21.37 
TCGA-B5-A11W TCGA-B5-A11Y TCGA-B5-A121 TCGA-B5-A1MV TCGA-B5-A3FC TCGA-BG-A0M0 
       11.15        10.36         8.52        12.49        62.14         7.79 
TCGA-BG-A0M2 TCGA-BG-A0M7 TCGA-BG-A0M9 TCGA-BG-A0MA TCGA-BG-A0MC TCGA-BG-A0MG 
       10.39        22.95        25.15        10.72        27.19        29.46 
TCGA-BG-A0MH TCGA-BG-A0MT TCGA-BG-A0RY TCGA-BG-A0VV TCGA-BG-A0VW TCGA-BG-A0VZ 
       44.09         7.89         4.21         8.55         4.31        28.54 
TCGA-BG-A0W1 TCGA-BG-A0YU TCGA-BG-A187 TCGA-BG-A18A TCGA-BG-A18B TCGA-BG-A2L7 
       29.82         9.17         7.59         8.28         5.10         5.82 
TCGA-BK-A0C9 TCGA-BK-A0CA TCGA-BK-A13C TCGA-BS-A0TA TCGA-BS-A0TC TCGA-BS-A0TD 
        9.50        12.20         6.64        23.47        74.30        65.82 
TCGA-BS-A0U5 TCGA-BS-A0UA TCGA-BS-A0UM TCGA-BS-A0V6 TCGA-D1-A0ZO TCGA-D1-A0ZR 
       72.46        83.51        72.03        54.25         2.27         0.56 
TCGA-D1-A0ZV TCGA-D1-A15W TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A165 TCGA-D1-A169 
       11.51        30.08        29.33        32.09         0.66        29.75 
TCGA-D1-A16B TCGA-D1-A16D TCGA-D1-A16E TCGA-D1-A16F TCGA-D1-A16O TCGA-D1-A16X 
       24.46        29.85        29.88         2.63        28.41         3.65 
TCGA-D1-A174 TCGA-D1-A175 TCGA-D1-A176 TCGA-D1-A17A TCGA-D1-A17B TCGA-D1-A17D 
       10.65         6.64        16.64         0.62         6.97         5.26 
TCGA-D1-A17F TCGA-D1-A17L TCGA-D1-A17N TCGA-D1-A17Q TCGA-D1-A17S TCGA-D1-A17T 
        1.28        15.09         1.51         1.78        10.72         2.30 
TCGA-D1-A17U TCGA-D1-A1NS TCGA-D1-A1NX TCGA-D1-A1NZ TCGA-D1-A1O0 TCGA-D1-A1O5 
       13.02         1.41        13.12         0.26         0.07        12.39 
TCGA-D1-A1O7 TCGA-D1-A2G5 TCGA-DI-A1BY TCGA-E6-A2P9 TCGA-EC-A24G TCGA-EO-A1Y7 
        1.05        41.42        36.62         6.64         1.51         7.99 
TCGA-EO-A22Y TCGA-EO-A2CH TCGA-EY-A1GE TCGA-EY-A1GF TCGA-EY-A1GH TCGA-EY-A1GK 
       25.02        19.40        18.15        17.49        17.33        16.54 
TCGA-EY-A1GW TCGA-EY-A1GX TCGA-EY-A1H0 TCGA-FI-A2F4 
        8.55         5.46        11.15        28.93 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
    0.46     0.03     0.03     0.56     0.20     0.07 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
   98.17   187.07   173.56    59.70   113.19   101.13 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  23.015   12.430   18.590   13.430   12.790   14.105 
[1] "0.5 - 98.2 (23.0)"  "0.0 - 187.1 (12.4)" "0.0 - 173.6 (18.6)"
[4] "0.6 - 59.7 (13.4)"  "0.2 - 113.2 (12.8)" "0.1 - 101.1 (14.1)"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype6" "subtype2"
  [7] "subtype6" "subtype6" "subtype6" "subtype2" "subtype3" "subtype3"
 [13] "subtype3" "subtype1" "subtype6" "subtype2" "subtype3" "subtype3"
 [19] "subtype4" "subtype3" "subtype6" "subtype5" "subtype6" "subtype6"
 [25] "subtype6" "subtype6" "subtype4" "subtype1" "subtype6" "subtype2"
 [31] "subtype6" "subtype6" "subtype2" "subtype2" "subtype2" "subtype4"
 [37] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype6"
 [43] "subtype6" "subtype2" "subtype6" "subtype6" "subtype2" "subtype2"
 [49] "subtype1" "subtype6" "subtype6" "subtype5" "subtype2" "subtype2"
 [55] "subtype2" "subtype6" "subtype2" "subtype3" "subtype5" "subtype2"
 [61] "subtype6" "subtype2" "subtype6" "subtype3" "subtype1" "subtype5"
 [67] "subtype2" "subtype6" "subtype3" "subtype2" "subtype5" "subtype1"
 [73] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [79] "subtype3" "subtype3" "subtype3" "subtype6" "subtype6" "subtype4"
 [85] "subtype1" "subtype3" "subtype4" "subtype6" "subtype1" "subtype1"
 [91] "subtype6" "subtype2" "subtype1" "subtype6" "subtype3" "subtype6"
 [97] "subtype3" "subtype2" "subtype2" "subtype4" "subtype1" "subtype3"
[103] "subtype3" "subtype6" "subtype6" "subtype3" "subtype1" "subtype3"
[109] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype6"
[115] "subtype6" "subtype6" "subtype3" "subtype2" "subtype2" "subtype1"
[121] "subtype5" "subtype5" "subtype3" "subtype6" "subtype2" "subtype2"
[127] "subtype6" "subtype2" "subtype2" "subtype6" "subtype5" "subtype1"
[133] "subtype6" "subtype3" "subtype5" "subtype2" "subtype2" "subtype2"
[139] "subtype2" "subtype2" "subtype6" "subtype6" "subtype3" "subtype5"
[145] "subtype1" "subtype2" "subtype2" "subtype1" "subtype6" "subtype2"
[151] "subtype2" "subtype2" "subtype5" "subtype2" "subtype6" "subtype6"
[157] "subtype5" "subtype6" "subtype2" "subtype2" "subtype2" "subtype1"
[163] "subtype1" "subtype3" "subtype2" "subtype1" "subtype6" "subtype6"
[169] "subtype1" "subtype6" "subtype6" "subtype5" "subtype1" "subtype3"
[175] "subtype6" "subtype6" "subtype2" "subtype4" "subtype3" "subtype3"
[181] "subtype2" "subtype2" "subtype6" "subtype4" "subtype3" "subtype6"
[187] "subtype5" "subtype2" "subtype6" "subtype3" "subtype6" "subtype6"
[193] "subtype6" "subtype6" "subtype6" "subtype6" "subtype6" "subtype5"
[199] "subtype3" "subtype6" "subtype5" "subtype6" "subtype3" "subtype6"
[205] "subtype2" "subtype2" "subtype6" "subtype4" "subtype4" "subtype2"
[211] "subtype3" "subtype2" "subtype6" "subtype3" "subtype4" "subtype6"
[217] "subtype6" "subtype3" "subtype2" "subtype2" "subtype6" "subtype3"
[223] "subtype6" "subtype6" "subtype6" "subtype6" "subtype6" "subtype3"
[229] "subtype3" "subtype1" "subtype3" "subtype6" "subtype3" "subtype6"
[235] "subtype3" "subtype6" "subtype6" "subtype3" "subtype6" "subtype6"
[241] "subtype3" "subtype6" "subtype5" "subtype3" "subtype6" "subtype6"
[247] "subtype6" "subtype5" "subtype1" "subtype1" "subtype2" "subtype6"
[253] "subtype6" "subtype6" "subtype2" "subtype5" "subtype3" "subtype6"
[259] "subtype2" "subtype3" "subtype6" "subtype6" "subtype6" "subtype2"
[265] "subtype3" "subtype3" "subtype1" "subtype6" "subtype3" "subtype3"
[271] "subtype4" "subtype6" "subtype2" "subtype3" "subtype3" "subtype6"
[277] "subtype3" "subtype4" "subtype1" "subtype6" "subtype3" "subtype5"
[283] "subtype1" "subtype3" "subtype3" "subtype6" "subtype2" "subtype3"
[289] "subtype6" "subtype2" "subtype3" "subtype6" "subtype2" "subtype3"
[295] "subtype3" "subtype3" "subtype2" "subtype6" "subtype2" "subtype5"
[301] "subtype3" "subtype6" "subtype6" "subtype1" "subtype6" "subtype1"
[307] "subtype4" "subtype6" "subtype6" "subtype6" "subtype6" "subtype6"
[313] "subtype2" "subtype2" "subtype2" "subtype4" "subtype6" "subtype3"
[319] "subtype3" "subtype2" "subtype1" "subtype6" "subtype2" "subtype6"
[325] "subtype6" "subtype6" "subtype1" "subtype2" "subtype6" "subtype6"
[331] "subtype3" "subtype6" "subtype6" "subtype3" "subtype5" "subtype6"
[337] "subtype1" "subtype6" "subtype6" "subtype3" "subtype6" "subtype6"
[343] "subtype6" "subtype6" "subtype2" "subtype2" "subtype6" "subtype1"
[349] "subtype6" "subtype6" "subtype6" "subtype6" "subtype3" "subtype2"
[355] "subtype6" "subtype2" "subtype2" "subtype5" "subtype2" "subtype2"
[361] "subtype5" "subtype2" "subtype6" "subtype3" "subtype2" "subtype5"
[367] "subtype2" "subtype4" "subtype2" "subtype1" "subtype2" "subtype5"
[373] "subtype2" "subtype6" "subtype2" "subtype6" "subtype2" "subtype6"
[379] "subtype2" "subtype1" "subtype1" "subtype2" "subtype5" "subtype5"
[385] "subtype6" "subtype2" "subtype6" "subtype1" "subtype1" "subtype1"
[391] "subtype2" "subtype4" "subtype1" "subtype3" "subtype6" "subtype6"
[397] "subtype6" "subtype3" "subtype2" "subtype6" "subtype3" "subtype2"
[403] "subtype2" "subtype2" "subtype3" "subtype5" "subtype2" "subtype1"
[409] "subtype1" "subtype2" "subtype6" "subtype6" "subtype6" "subtype2"
[415] "subtype2" "subtype5" "subtype4" "subtype5" "subtype2" "subtype5"
[421] "subtype5" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[427] "subtype4" "subtype4" "subtype2" "subtype2" "subtype2" "subtype2"
[433] "subtype2" "subtype6" "subtype2" "subtype2" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype6" "subtype2"
  [7] "subtype6" "subtype6" "subtype6" "subtype2" "subtype3" "subtype3"
 [13] "subtype3" "subtype1" "subtype6" "subtype2" "subtype3" "subtype3"
 [19] "subtype4" "subtype3" "subtype6" "subtype5" "subtype6" "subtype6"
 [25] "subtype6" "subtype6" "subtype4" "subtype1" "subtype6" "subtype2"
 [31] "subtype6" "subtype6" "subtype2" "subtype2" "subtype2" "subtype4"
 [37] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype6"
 [43] "subtype6" "subtype2" "subtype6" "subtype6" "subtype2" "subtype2"
 [49] "subtype1" "subtype6" "subtype6" "subtype5" "subtype2" "subtype2"
 [55] "subtype2" "subtype6" "subtype2" "subtype3" "subtype5" "subtype2"
 [61] "subtype6" "subtype2" "subtype6" "subtype3" "subtype1" "subtype5"
 [67] "subtype2" "subtype6" "subtype3" "subtype2" "subtype5" "subtype1"
 [73] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [79] "subtype3" "subtype3" "subtype3" "subtype6" "subtype6" "subtype4"
 [85] "subtype1" "subtype3" "subtype4" "subtype6" "subtype1" "subtype1"
 [91] "subtype6" "subtype2" "subtype1" "subtype6" "subtype3" "subtype6"
 [97] "subtype3" "subtype2" "subtype2" "subtype4" "subtype1" "subtype3"
[103] "subtype3" "subtype6" "subtype6" "subtype3" "subtype1" "subtype3"
[109] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype6"
[115] "subtype6" "subtype6" "subtype3" "subtype2" "subtype2" "subtype1"
[121] "subtype5" "subtype5" "subtype3" "subtype6" "subtype2" "subtype2"
[127] "subtype6" "subtype2" "subtype2" "subtype6" "subtype5" "subtype1"
[133] "subtype6" "subtype3" "subtype5" "subtype2" "subtype2" "subtype2"
[139] "subtype2" "subtype2" "subtype6" "subtype6" "subtype3" "subtype5"
[145] "subtype1" "subtype2" "subtype2" "subtype1" "subtype6" "subtype2"
[151] "subtype2" "subtype2" "subtype5" "subtype2" "subtype6" "subtype6"
[157] "subtype5" "subtype6" "subtype2" "subtype2" "subtype2" "subtype1"
[163] "subtype1" "subtype3" "subtype2" "subtype1" "subtype6" "subtype6"
[169] "subtype1" "subtype6" "subtype6" "subtype5" "subtype1" "subtype3"
[175] "subtype6" "subtype6" "subtype2" "subtype4" "subtype3" "subtype3"
[181] "subtype2" "subtype2" "subtype6" "subtype4" "subtype3" "subtype6"
[187] "subtype5" "subtype2" "subtype6" "subtype3" "subtype6" "subtype6"
[193] "subtype6" "subtype6" "subtype6" "subtype6" "subtype6" "subtype5"
[199] "subtype3" "subtype6" "subtype5" "subtype6" "subtype3" "subtype6"
[205] "subtype2" "subtype2" "subtype6" "subtype4" "subtype4" "subtype2"
[211] "subtype3" "subtype2" "subtype6" "subtype3" "subtype4" "subtype6"
[217] "subtype6" "subtype3" "subtype2" "subtype2" "subtype6" "subtype3"
[223] "subtype6" "subtype6" "subtype6" "subtype6" "subtype6" "subtype3"
[229] "subtype3" "subtype1" "subtype3" "subtype6" "subtype3" "subtype6"
[235] "subtype3" "subtype6" "subtype6" "subtype3" "subtype6" "subtype6"
[241] "subtype3" "subtype6" "subtype5" "subtype3" "subtype6" "subtype6"
[247] "subtype6" "subtype5" "subtype1" "subtype1" "subtype2" "subtype6"
[253] "subtype6" "subtype6" "subtype2" "subtype5" "subtype3" "subtype6"
[259] "subtype2" "subtype3" "subtype6" "subtype6" "subtype6" "subtype2"
[265] "subtype3" "subtype3" "subtype1" "subtype6" "subtype3" "subtype3"
[271] "subtype4" "subtype6" "subtype2" "subtype3" "subtype3" "subtype6"
[277] "subtype3" "subtype4" "subtype1" "subtype6" "subtype3" "subtype5"
[283] "subtype1" "subtype3" "subtype3" "subtype6" "subtype2" "subtype3"
[289] "subtype6" "subtype2" "subtype3" "subtype6" "subtype2" "subtype3"
[295] "subtype3" "subtype3" "subtype2" "subtype6" "subtype2" "subtype5"
[301] "subtype3" "subtype6" "subtype6" "subtype1" "subtype6" "subtype1"
[307] "subtype4" "subtype6" "subtype6" "subtype6" "subtype6" "subtype6"
[313] "subtype2" "subtype2" "subtype2" "subtype4" "subtype6" "subtype3"
[319] "subtype3" "subtype2" "subtype1" "subtype6" "subtype2" "subtype6"
[325] "subtype6" "subtype6" "subtype1" "subtype2" "subtype6" "subtype6"
[331] "subtype3" "subtype6" "subtype6" "subtype3" "subtype5" "subtype6"
[337] "subtype1" "subtype6" "subtype6" "subtype3" "subtype6" "subtype6"
[343] "subtype6" "subtype6" "subtype2" "subtype2" "subtype6" "subtype1"
[349] "subtype6" "subtype6" "subtype6" "subtype6" "subtype3" "subtype2"
[355] "subtype6" "subtype2" "subtype2" "subtype5" "subtype2" "subtype2"
[361] "subtype5" "subtype2" "subtype6" "subtype3" "subtype2" "subtype5"
[367] "subtype2" "subtype4" "subtype2" "subtype1" "subtype2" "subtype5"
[373] "subtype2" "subtype6" "subtype2" "subtype6" "subtype2" "subtype6"
[379] "subtype2" "subtype1" "subtype1" "subtype2" "subtype5" "subtype5"
[385] "subtype6" "subtype2" "subtype6" "subtype1" "subtype1" "subtype1"
[391] "subtype2" "subtype4" "subtype1" "subtype3" "subtype6" "subtype6"
[397] "subtype6" "subtype3" "subtype2" "subtype6" "subtype3" "subtype2"
[403] "subtype2" "subtype2" "subtype3" "subtype5" "subtype2" "subtype1"
[409] "subtype1" "subtype2" "subtype6" "subtype6" "subtype6" "subtype2"
[415] "subtype2" "subtype5" "subtype4" "subtype5" "subtype2" "subtype5"
[421] "subtype5" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[427] "subtype4" "subtype4" "subtype2" "subtype2" "subtype2" "subtype2"
[433] "subtype2" "subtype6" "subtype2" "subtype2" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype6" "subtype2"
  [7] "subtype6" "subtype6" "subtype6" "subtype2" "subtype3" "subtype3"
 [13] "subtype3" "subtype1" "subtype6" "subtype2" "subtype3" "subtype3"
 [19] "subtype4" "subtype3" "subtype6" "subtype5" "subtype6" "subtype6"
 [25] "subtype6" "subtype6" "subtype4" "subtype1" "subtype6" "subtype2"
 [31] "subtype6" "subtype6" "subtype2" "subtype2" "subtype2" "subtype4"
 [37] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype6"
 [43] "subtype6" "subtype2" "subtype6" "subtype6" "subtype2" "subtype2"
 [49] "subtype1" "subtype6" "subtype6" "subtype5" "subtype2" "subtype2"
 [55] "subtype2" "subtype6" "subtype2" "subtype3" "subtype5" "subtype2"
 [61] "subtype6" "subtype2" "subtype6" "subtype3" "subtype1" "subtype5"
 [67] "subtype2" "subtype6" "subtype3" "subtype2" "subtype5" "subtype1"
 [73] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [79] "subtype3" "subtype3" "subtype3" "subtype6" "subtype6" "subtype4"
 [85] "subtype1" "subtype3" "subtype4" "subtype6" "subtype1" "subtype1"
 [91] "subtype6" "subtype2" "subtype1" "subtype6" "subtype3" "subtype6"
 [97] "subtype3" "subtype2" "subtype2" "subtype4" "subtype1" "subtype3"
[103] "subtype3" "subtype6" "subtype6" "subtype3" "subtype1" "subtype3"
[109] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype6"
[115] "subtype6" "subtype6" "subtype3" "subtype2" "subtype2" "subtype1"
[121] "subtype5" "subtype5" "subtype3" "subtype6" "subtype2" "subtype2"
[127] "subtype6" "subtype2" "subtype2" "subtype6" "subtype5" "subtype1"
[133] "subtype6" "subtype3" "subtype5" "subtype2" "subtype2" "subtype2"
[139] "subtype2" "subtype2" "subtype6" "subtype6" "subtype3" "subtype5"
[145] "subtype1" "subtype2" "subtype2" "subtype1" "subtype6" "subtype2"
[151] "subtype2" "subtype2" "subtype5" "subtype2" "subtype6" "subtype6"
[157] "subtype5" "subtype6" "subtype2" "subtype2" "subtype2" "subtype1"
[163] "subtype1" "subtype3" "subtype2" "subtype1" "subtype6" "subtype6"
[169] "subtype1" "subtype6" "subtype6" "subtype5" "subtype1" "subtype3"
[175] "subtype6" "subtype6" "subtype2" "subtype4" "subtype3" "subtype3"
[181] "subtype2" "subtype2" "subtype6" "subtype4" "subtype3" "subtype6"
[187] "subtype5" "subtype2" "subtype6" "subtype3" "subtype6" "subtype6"
[193] "subtype6" "subtype6" "subtype6" "subtype6" "subtype6" "subtype5"
[199] "subtype3" "subtype6" "subtype5" "subtype6" "subtype3" "subtype6"
[205] "subtype2" "subtype2" "subtype6" "subtype4" "subtype4" "subtype2"
[211] "subtype3" "subtype2" "subtype6" "subtype3" "subtype4" "subtype6"
[217] "subtype6" "subtype3" "subtype2" "subtype2" "subtype6" "subtype3"
[223] "subtype6" "subtype6" "subtype6" "subtype6" "subtype6" "subtype3"
[229] "subtype3" "subtype1" "subtype3" "subtype6" "subtype3" "subtype6"
[235] "subtype3" "subtype6" "subtype6" "subtype3" "subtype6" "subtype6"
[241] "subtype3" "subtype6" "subtype5" "subtype3" "subtype6" "subtype6"
[247] "subtype6" "subtype5" "subtype1" "subtype1" "subtype2" "subtype6"
[253] "subtype6" "subtype6" "subtype2" "subtype5" "subtype3" "subtype6"
[259] "subtype2" "subtype3" "subtype6" "subtype6" "subtype6" "subtype2"
[265] "subtype3" "subtype3" "subtype1" "subtype6" "subtype3" "subtype3"
[271] "subtype4" "subtype6" "subtype2" "subtype3" "subtype3" "subtype6"
[277] "subtype3" "subtype4" "subtype1" "subtype6" "subtype3" "subtype5"
[283] "subtype1" "subtype3" "subtype3" "subtype6" "subtype2" "subtype3"
[289] "subtype6" "subtype2" "subtype3" "subtype6" "subtype2" "subtype3"
[295] "subtype3" "subtype3" "subtype2" "subtype6" "subtype2" "subtype5"
[301] "subtype3" "subtype6" "subtype6" "subtype1" "subtype6" "subtype1"
[307] "subtype4" "subtype6" "subtype6" "subtype6" "subtype6" "subtype6"
[313] "subtype2" "subtype2" "subtype2" "subtype4" "subtype6" "subtype3"
[319] "subtype3" "subtype2" "subtype1" "subtype6" "subtype2" "subtype6"
[325] "subtype6" "subtype6" "subtype1" "subtype2" "subtype6" "subtype6"
[331] "subtype3" "subtype6" "subtype6" "subtype3" "subtype5" "subtype6"
[337] "subtype1" "subtype6" "subtype6" "subtype3" "subtype6" "subtype6"
[343] "subtype6" "subtype6" "subtype2" "subtype2" "subtype6" "subtype1"
[349] "subtype6" "subtype6" "subtype6" "subtype6" "subtype3" "subtype2"
[355] "subtype6" "subtype2" "subtype2" "subtype5" "subtype2" "subtype2"
[361] "subtype5" "subtype2" "subtype6" "subtype3" "subtype2" "subtype5"
[367] "subtype2" "subtype4" "subtype2" "subtype1" "subtype2" "subtype5"
[373] "subtype2" "subtype6" "subtype2" "subtype6" "subtype2" "subtype6"
[379] "subtype2" "subtype1" "subtype1" "subtype2" "subtype5" "subtype5"
[385] "subtype6" "subtype2" "subtype6" "subtype1" "subtype1" "subtype1"
[391] "subtype2" "subtype4" "subtype1" "subtype3" "subtype6" "subtype6"
[397] "subtype6" "subtype3" "subtype2" "subtype6" "subtype3" "subtype2"
[403] "subtype2" "subtype2" "subtype3" "subtype5" "subtype2" "subtype1"
[409] "subtype1" "subtype2" "subtype6" "subtype6" "subtype6" "subtype2"
[415] "subtype2" "subtype5" "subtype4" "subtype5" "subtype2" "subtype5"
[421] "subtype5" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[427] "subtype4" "subtype4" "subtype2" "subtype2" "subtype2" "subtype2"
[433] "subtype2" "subtype6" "subtype2" "subtype2" "subtype2"
D10V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      49
  subtype2                                      40
  subtype3                                      74
  subtype4                                      20
  subtype5                                      30
  subtype6                                     136
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             1                                 1
  subtype2                            12                                67
  subtype3                             0                                 0
  subtype4                             0                                 0
  subtype5                             2                                 3
  subtype6                             3                                 4
D10V3, multiclass
D10V4, binary
          cls
clus         0   1
  subtype1  21  30
  subtype2  32  87
  subtype3  18  56
  subtype4  11   9
  subtype5   6  29
  subtype6  39 104
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   21   30
  subtype2   32   87
  subtype3   18   56
  subtype4   11    9
  subtype5    6   29
  subtype6   39  104
          vv
clus        R0  R1  R2  RX
  subtype1  35   4   1   0
  subtype2  78   8   7   7
  subtype3  52   6   1   5
  subtype4  13   0   1   2
  subtype5  23   3   1   2
  subtype6 101   3   3   8
D10V5, multiclass
                                    V1.D 
                         "Time to Death" 
                                      V2 
                                   "AGE" 
                                      V3 
                     "HISTOLOGICAL.TYPE" 
                                      V4 
"RADIATIONS.RADIATION.REGIMENINDICATION" 
                                      V5 
             "COMPLETENESS.OF.RESECTION" 
> q(save="no")
