Clinical Features CN_CNMF METHLYATION_CNMF MRNASEQ_CNMF MRNASEQ_CHIERARCHICAL MIRSEQ_CNMF MIRSEQ_CHIERARCHICAL nMutated (%) nWild-Type Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q PIK3CA 9 (23%) 30 0.16403 1 0.23664 1 0.15796 1 0.087915 1 1 1 0.14088 1 TMCC1 4 (10%) 35 NA NA 0.2823 1 1 1 1 1 0.31626 1 0.79319 1 PRG4 5 (13%) 34 0.39706 1 0.12027 1 0.12305 1 0.33862 1 0.15209 1 0.38943 1 CDC27 5 (13%) 34 0.29412 1 0.46514 1 0.47805 1 1 1 0.83418 1 0.1405 1 NFE2L2 6 (15%) 33 0.5258 1 0.082083 1 0.27393 1 0.49762 1 0.12341 1 0.16218 1 MAPK1 3 (8%) 36 0.2049 1 0.52415 1 0.58926 1 0.40422 1 0.28997 1 1 1 SSX7 3 (8%) 36 NA NA 0.73001 1 1 1 1 1 0.4239 1 1 1 UGT3A2 3 (8%) 36 NA NA 0.73001 1 0.076458 1 0.72617 1 0.4239 1 0.25473 1 PRB2 4 (10%) 35 NA NA 0.33127 1 0.339 1 0.8018 1 0.17431 1 0.50213 1