This pipeline computes the correlation between significantly recurrent gene mutations and molecular subtypes.
Testing the association between mutation status of 209 genes and 10 molecular subtypes across 224 patients, 38 significant findings detected with P value < 0.05 and Q value < 0.25.
-
FBXW7 mutation correlated to 'CN_CNMF'.
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BRAF mutation correlated to 'MRNA_CNMF', 'MRNA_CHIERARCHICAL', 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
-
KRAS mutation correlated to 'MRNASEQ_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
-
TP53 mutation correlated to 'CN_CNMF'.
-
FAT4 mutation correlated to 'CN_CNMF'.
-
CDH2 mutation correlated to 'MRNA_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
-
FLG mutation correlated to 'MRNA_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
-
DNAH5 mutation correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
-
SDK1 mutation correlated to 'MRNASEQ_CHIERARCHICAL'.
-
TMEM132D mutation correlated to 'MRNA_CNMF'.
-
LRRN3 mutation correlated to 'MRNASEQ_CNMF'.
-
GUCY1A3 mutation correlated to 'MRNASEQ_CHIERARCHICAL'.
-
OR51V1 mutation correlated to 'MRNASEQ_CHIERARCHICAL'.
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ZC3H13 mutation correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
-
CSMD3 mutation correlated to 'MRNASEQ_CHIERARCHICAL'.
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DCAF4L2 mutation correlated to 'MRNASEQ_CHIERARCHICAL'.
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DOCK2 mutation correlated to 'MRNA_CNMF', 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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RIMS1 mutation correlated to 'MRNASEQ_CHIERARCHICAL'.
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CDH10 mutation correlated to 'MRNA_CNMF', 'CN_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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SYNE1 mutation correlated to 'MRNA_CNMF', 'MRNA_CHIERARCHICAL', and 'CN_CNMF'.
Clinical Features |
MRNA CNMF |
MRNA CHIERARCHICAL |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
||
nMutated (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
BRAF | 22 (10%) | 202 |
1.13e-06 (0.00205) |
1.26e-07 (0.000228) |
4.17e-05 (0.0749) |
0.875 (1.00) |
0.227 (1.00) |
3.49e-08 (6.34e-05) |
1.92e-10 (3.49e-07) |
0.6 (1.00) |
1 (1.00) |
|
DOCK2 | 21 (9%) | 203 |
0.000122 (0.217) |
0.00397 (1.00) |
0.000138 (0.245) |
0.0958 (1.00) |
0.779 (1.00) |
1.35e-05 (0.0244) |
7.91e-07 (0.00143) |
1 (1.00) |
0.101 (1.00) |
|
CDH2 | 16 (7%) | 208 |
3.19e-05 (0.0573) |
0.00563 (1.00) |
0.00381 (1.00) |
0.0336 (1.00) |
0.817 (1.00) |
5.18e-05 (0.093) |
1.1e-05 (0.0198) |
0.41 (1.00) |
0.683 (1.00) |
|
DNAH5 | 34 (15%) | 190 |
0.000387 (0.683) |
0.00585 (1.00) |
0.00013 (0.231) |
0.62 (1.00) |
0.301 (1.00) |
7.52e-05 (0.135) |
1.52e-06 (0.00275) |
1 (1.00) |
0.238 (1.00) |
|
CDH10 | 14 (6%) | 210 |
4.46e-05 (0.0801) |
0.00333 (1.00) |
0.000131 (0.233) |
0.336 (1.00) |
0.605 (1.00) |
0.00456 (1.00) |
2.68e-05 (0.0483) |
1 (1.00) |
0.257 (1.00) |
|
SYNE1 | 47 (21%) | 177 |
2.86e-05 (0.0514) |
2.56e-05 (0.046) |
1.63e-06 (0.00295) |
1 (1.00) |
0.641 (1.00) |
0.419 (1.00) |
0.0204 (1.00) |
0.000383 (0.677) |
0.367 (1.00) |
0.0326 (1.00) |
KRAS | 96 (43%) | 128 |
0.000775 (1.00) |
0.00193 (1.00) |
0.485 (1.00) |
0.257 (1.00) |
0.742 (1.00) |
0.946 (1.00) |
1.94e-07 (0.000351) |
3.02e-07 (0.000547) |
0.0688 (1.00) |
0.735 (1.00) |
FLG | 32 (14%) | 192 |
2.36e-06 (0.00426) |
0.00102 (1.00) |
0.00376 (1.00) |
0.0122 (1.00) |
0.813 (1.00) |
0.00123 (1.00) |
4.08e-05 (0.0734) |
1 (1.00) |
0.74 (1.00) |
|
ZC3H13 | 21 (9%) | 203 |
0.000395 (0.697) |
0.000571 (1.00) |
8.41e-05 (0.15) |
0.345 (1.00) |
0.676 (1.00) |
0.000883 (1.00) |
6.7e-05 (0.12) |
1 (1.00) |
0.306 (1.00) |
|
FBXW7 | 38 (17%) | 186 |
0.0186 (1.00) |
0.0302 (1.00) |
0.000122 (0.217) |
0.0191 (1.00) |
0.126 (1.00) |
0.000223 (0.397) |
0.000368 (0.651) |
0.356 (1.00) |
0.118 (1.00) |
|
TP53 | 120 (54%) | 104 |
0.00037 (0.654) |
0.00159 (1.00) |
7.28e-11 (1.32e-07) |
0.887 (1.00) |
0.658 (1.00) |
0.00978 (1.00) |
0.00162 (1.00) |
0.0252 (1.00) |
0.134 (1.00) |
|
FAT4 | 39 (17%) | 185 |
0.0134 (1.00) |
0.08 (1.00) |
6.63e-05 (0.119) |
0.597 (1.00) |
0.0868 (1.00) |
0.0448 (1.00) |
0.00381 (1.00) |
0.635 (1.00) |
0.683 (1.00) |
|
SDK1 | 27 (12%) | 197 |
0.00909 (1.00) |
0.00366 (1.00) |
0.24 (1.00) |
0.764 (1.00) |
0.941 (1.00) |
0.00143 (1.00) |
0.000102 (0.182) |
0.6 (1.00) |
1 (1.00) |
|
TMEM132D | 19 (8%) | 205 |
2.85e-05 (0.0512) |
0.00157 (1.00) |
0.00293 (1.00) |
0.0366 (1.00) |
0.913 (1.00) |
0.00222 (1.00) |
0.00162 (1.00) |
1 (1.00) |
1 (1.00) |
|
LRRN3 | 10 (4%) | 214 |
0.00243 (1.00) |
0.123 (1.00) |
0.446 (1.00) |
0.387 (1.00) |
0.528 (1.00) |
9.57e-05 (0.171) |
0.0318 (1.00) |
0.274 (1.00) |
0.502 (1.00) |
|
GUCY1A3 | 12 (5%) | 212 |
0.38 (1.00) |
0.172 (1.00) |
0.0311 (1.00) |
0.825 (1.00) |
1 (1.00) |
0.0145 (1.00) |
7.22e-05 (0.129) |
1 (1.00) |
0.584 (1.00) |
|
OR51V1 | 9 (4%) | 215 |
0.00262 (1.00) |
0.00756 (1.00) |
0.0016 (1.00) |
0.799 (1.00) |
1 (1.00) |
0.000361 (0.639) |
2.77e-06 (0.005) |
1 (1.00) |
0.545 (1.00) |
|
CSMD3 | 28 (12%) | 196 |
0.00625 (1.00) |
0.0145 (1.00) |
0.00457 (1.00) |
0.19 (1.00) |
0.0678 (1.00) |
0.0221 (1.00) |
0.000129 (0.23) |
0.6 (1.00) |
0.0587 (1.00) |
|
DCAF4L2 | 11 (5%) | 213 |
0.00355 (1.00) |
0.0326 (1.00) |
0.027 (1.00) |
0.0276 (1.00) |
0.000116 (0.208) |
0.304 (1.00) |
0.545 (1.00) |
|||
RIMS1 | 15 (7%) | 209 |
0.24 (1.00) |
0.423 (1.00) |
0.00135 (1.00) |
0.0193 (1.00) |
0.795 (1.00) |
0.0338 (1.00) |
0.000103 (0.183) |
0.458 (1.00) |
0.736 (1.00) |
|
NRAS | 20 (9%) | 204 |
0.0358 (1.00) |
0.33 (1.00) |
0.274 (1.00) |
0.857 (1.00) |
0.676 (1.00) |
0.25 (1.00) |
0.636 (1.00) |
1 (1.00) |
1 (1.00) |
|
PIK3CA | 33 (15%) | 191 |
0.194 (1.00) |
0.38 (1.00) |
0.00048 (0.844) |
0.0323 (1.00) |
0.0748 (1.00) |
0.0177 (1.00) |
0.000436 (0.768) |
0.0853 (1.00) |
1 (1.00) |
|
APC | 160 (71%) | 64 |
0.0183 (1.00) |
0.00907 (1.00) |
0.221 (1.00) |
0.533 (1.00) |
0.374 (1.00) |
0.0164 (1.00) |
0.00922 (1.00) |
0.689 (1.00) |
0.464 (1.00) |
|
SMAD4 | 26 (12%) | 198 |
0.023 (1.00) |
0.134 (1.00) |
0.0355 (1.00) |
0.388 (1.00) |
0.162 (1.00) |
0.00333 (1.00) |
0.00127 (1.00) |
1 (1.00) |
0.846 (1.00) |
|
FAM123B | 25 (11%) | 199 |
0.0765 (1.00) |
0.0348 (1.00) |
0.00539 (1.00) |
0.141 (1.00) |
0.945 (1.00) |
0.0084 (1.00) |
0.00267 (1.00) |
1 (1.00) |
0.459 (1.00) |
|
TTN | 85 (38%) | 139 |
0.00535 (1.00) |
0.105 (1.00) |
0.00133 (1.00) |
0.657 (1.00) |
0.0909 (1.00) |
0.849 (1.00) |
0.0392 (1.00) |
0.000551 (0.967) |
0.151 (1.00) |
0.927 (1.00) |
SMAD2 | 15 (7%) | 209 |
0.114 (1.00) |
0.604 (1.00) |
0.0393 (1.00) |
0.286 (1.00) |
0.143 (1.00) |
0.265 (1.00) |
0.294 (1.00) |
1 (1.00) |
0.711 (1.00) |
|
TCF7L2 | 18 (8%) | 206 |
1 (1.00) |
0.311 (1.00) |
0.417 (1.00) |
0.355 (1.00) |
0.372 (1.00) |
0.238 (1.00) |
0.792 (1.00) |
1 (1.00) |
0.23 (1.00) |
|
KRTAP5-5 | 4 (2%) | 220 |
0.353 (1.00) |
1 (1.00) |
0.48 (1.00) |
0.172 (1.00) |
1 (1.00) |
0.579 (1.00) |
1 (1.00) |
1 (1.00) |
1 (1.00) |
|
ACVR1B | 14 (6%) | 210 |
0.109 (1.00) |
0.423 (1.00) |
0.0496 (1.00) |
0.463 (1.00) |
0.15 (1.00) |
0.0815 (1.00) |
0.0126 (1.00) |
0.435 (1.00) |
0.711 (1.00) |
|
WBSCR17 | 19 (8%) | 205 |
0.0966 (1.00) |
0.31 (1.00) |
0.141 (1.00) |
0.262 (1.00) |
0.267 (1.00) |
0.654 (1.00) |
0.0146 (1.00) |
0.544 (1.00) |
0.618 (1.00) |
|
PCDH9 | 22 (10%) | 202 |
0.727 (1.00) |
0.462 (1.00) |
0.0495 (1.00) |
0.875 (1.00) |
0.478 (1.00) |
0.489 (1.00) |
0.0447 (1.00) |
0.563 (1.00) |
1 (1.00) |
|
LRP1B | 39 (17%) | 185 |
0.00288 (1.00) |
0.0211 (1.00) |
0.00332 (1.00) |
0.168 (1.00) |
1 (1.00) |
0.0113 (1.00) |
0.00162 (1.00) |
1 (1.00) |
0.087 (1.00) |
|
TNFRSF10C | 6 (3%) | 218 |
0.376 (1.00) |
1 (1.00) |
0.675 (1.00) |
1 (1.00) |
0.236 (1.00) |
0.89 (1.00) |
0.622 (1.00) |
1 (1.00) |
1 (1.00) |
|
MAP2K4 | 11 (5%) | 213 |
0.0756 (1.00) |
0.423 (1.00) |
0.123 (1.00) |
0.336 (1.00) |
1 (1.00) |
0.497 (1.00) |
0.134 (1.00) |
1 (1.00) |
0.545 (1.00) |
|
KIAA1804 | 15 (7%) | 209 |
0.23 (1.00) |
0.411 (1.00) |
0.0659 (1.00) |
0.137 (1.00) |
0.614 (1.00) |
0.46 (1.00) |
0.575 (1.00) |
1 (1.00) |
0.736 (1.00) |
|
NRXN1 | 20 (9%) | 204 |
0.432 (1.00) |
0.354 (1.00) |
0.0843 (1.00) |
0.876 (1.00) |
0.696 (1.00) |
0.193 (1.00) |
0.0376 (1.00) |
1 (1.00) |
0.13 (1.00) |
|
KLHL4 | 16 (7%) | 208 |
0.0126 (1.00) |
0.0613 (1.00) |
0.00117 (1.00) |
0.387 (1.00) |
1 (1.00) |
0.0421 (1.00) |
0.0109 (1.00) |
0.41 (1.00) |
0.0126 (1.00) |
|
SOX9 | 10 (4%) | 214 |
0.142 (1.00) |
0.352 (1.00) |
0.00451 (1.00) |
0.519 (1.00) |
1 (1.00) |
0.839 (1.00) |
0.659 (1.00) |
1 (1.00) |
0.584 (1.00) |
|
PRDM9 | 16 (7%) | 208 |
0.00501 (1.00) |
1 (1.00) |
0.0701 (1.00) |
0.122 (1.00) |
0.86 (1.00) |
0.032 (1.00) |
0.22 (1.00) |
1 (1.00) |
0.255 (1.00) |
|
PCBP1 | 6 (3%) | 218 |
0.175 (1.00) |
0.244 (1.00) |
0.396 (1.00) |
0.163 (1.00) |
0.203 (1.00) |
1 (1.00) |
1 (1.00) |
|||
DMD | 33 (15%) | 191 |
0.0178 (1.00) |
0.0412 (1.00) |
0.0052 (1.00) |
0.624 (1.00) |
0.826 (1.00) |
0.0421 (1.00) |
0.00721 (1.00) |
1 (1.00) |
0.156 (1.00) |
|
CSMD1 | 26 (12%) | 198 |
0.152 (1.00) |
0.122 (1.00) |
0.0523 (1.00) |
1 (1.00) |
0.137 (1.00) |
0.739 (1.00) |
0.0885 (1.00) |
0.0155 (1.00) |
0.0581 (1.00) |
0.142 (1.00) |
LIFR | 18 (8%) | 206 |
0.116 (1.00) |
0.579 (1.00) |
0.219 (1.00) |
0.579 (1.00) |
0.676 (1.00) |
0.251 (1.00) |
0.00809 (1.00) |
1 (1.00) |
0.064 (1.00) |
|
OR6N1 | 10 (4%) | 214 |
0.00197 (1.00) |
0.123 (1.00) |
0.013 (1.00) |
0.463 (1.00) |
1 (1.00) |
0.0167 (1.00) |
0.00422 (1.00) |
0.304 (1.00) |
1 (1.00) |
|
CCDC160 | 7 (3%) | 217 |
0.0679 (1.00) |
0.742 (1.00) |
0.108 (1.00) |
0.215 (1.00) |
1 (1.00) |
0.258 (1.00) |
0.499 (1.00) |
1 (1.00) |
0.0575 (1.00) |
|
CNTN6 | 17 (8%) | 207 |
0.153 (1.00) |
0.288 (1.00) |
0.0782 (1.00) |
0.266 (1.00) |
0.449 (1.00) |
0.333 (1.00) |
0.0051 (1.00) |
1 (1.00) |
0.322 (1.00) |
|
CPXCR1 | 9 (4%) | 215 |
0.00223 (1.00) |
0.407 (1.00) |
0.191 (1.00) |
0.519 (1.00) |
1 (1.00) |
0.347 (1.00) |
0.0523 (1.00) |
0.304 (1.00) |
0.0285 (1.00) |
|
SLITRK1 | 15 (7%) | 209 |
0.504 (1.00) |
0.881 (1.00) |
0.159 (1.00) |
0.206 (1.00) |
0.662 (1.00) |
0.963 (1.00) |
0.0496 (1.00) |
1 (1.00) |
0.181 (1.00) |
|
CNBD1 | 7 (3%) | 217 |
0.767 (1.00) |
1 (1.00) |
0.293 (1.00) |
0.258 (1.00) |
0.0835 (1.00) |
1 (1.00) |
0.406 (1.00) |
|||
CTNNB1 | 11 (5%) | 213 |
0.763 (1.00) |
0.832 (1.00) |
0.048 (1.00) |
0.648 (1.00) |
0.525 (1.00) |
0.332 (1.00) |
0.061 (1.00) |
1 (1.00) |
0.545 (1.00) |
|
DKK2 | 6 (3%) | 218 |
0.0322 (1.00) |
0.0134 (1.00) |
0.628 (1.00) |
0.332 (1.00) |
0.871 (1.00) |
0.0371 (1.00) |
0.367 (1.00) |
1 (1.00) |
1 (1.00) |
|
ERBB4 | 18 (8%) | 206 |
0.115 (1.00) |
0.67 (1.00) |
0.00631 (1.00) |
0.118 (1.00) |
1 (1.00) |
0.000461 (0.811) |
0.165 (1.00) |
0.481 (1.00) |
0.76 (1.00) |
|
ARID1A | 21 (9%) | 203 |
0.0216 (1.00) |
0.0883 (1.00) |
0.0136 (1.00) |
0.699 (1.00) |
0.438 (1.00) |
0.0585 (1.00) |
0.0238 (1.00) |
1 (1.00) |
0.064 (1.00) |
|
KIAA1486 | 13 (6%) | 211 |
0.337 (1.00) |
1 (1.00) |
0.306 (1.00) |
0.463 (1.00) |
1 (1.00) |
0.787 (1.00) |
0.481 (1.00) |
1 (1.00) |
0.0638 (1.00) |
|
ROBO1 | 18 (8%) | 206 |
0.0046 (1.00) |
0.0617 (1.00) |
0.0221 (1.00) |
0.0201 (1.00) |
0.871 (1.00) |
0.0274 (1.00) |
0.00173 (1.00) |
0.502 (1.00) |
0.281 (1.00) |
|
ZFHX4 | 24 (11%) | 200 |
0.703 (1.00) |
0.327 (1.00) |
0.0166 (1.00) |
0.699 (1.00) |
0.913 (1.00) |
0.594 (1.00) |
0.0452 (1.00) |
1 (1.00) |
0.072 (1.00) |
|
EPHA3 | 16 (7%) | 208 |
0.000438 (0.771) |
0.0299 (1.00) |
0.214 (1.00) |
0.313 (1.00) |
0.905 (1.00) |
0.0513 (1.00) |
0.000308 (0.546) |
1 (1.00) |
0.23 (1.00) |
|
PRIM2 | 8 (4%) | 216 |
0.285 (1.00) |
0.603 (1.00) |
0.889 (1.00) |
0.137 (1.00) |
0.636 (1.00) |
0.325 (1.00) |
0.611 (1.00) |
1 (1.00) |
0.406 (1.00) |
|
UBE2NL | 7 (3%) | 217 |
0.102 (1.00) |
0.458 (1.00) |
0.402 (1.00) |
0.137 (1.00) |
1 (1.00) |
0.647 (1.00) |
0.15 (1.00) |
1 (1.00) |
0.351 (1.00) |
|
ACVR2A | 9 (4%) | 215 |
0.00784 (1.00) |
0.452 (1.00) |
0.0325 (1.00) |
0.0487 (1.00) |
0.741 (1.00) |
0.0467 (1.00) |
0.0126 (1.00) |
1 (1.00) |
0.545 (1.00) |
|
ADAM29 | 11 (5%) | 213 |
0.45 (1.00) |
1 (1.00) |
0.447 (1.00) |
0.898 (1.00) |
0.318 (1.00) |
1 (1.00) |
0.545 (1.00) |
|||
ATP10A | 19 (8%) | 205 |
0.0169 (1.00) |
0.0882 (1.00) |
0.141 (1.00) |
0.000382 (0.675) |
0.365 (1.00) |
0.0319 (1.00) |
0.11 (1.00) |
1 (1.00) |
0.386 (1.00) |
|
GABRA5 | 9 (4%) | 215 |
0.473 (1.00) |
1 (1.00) |
0.756 (1.00) |
0.546 (1.00) |
0.0637 (1.00) |
0.244 (1.00) |
0.456 (1.00) |
|||
NALCN | 20 (9%) | 204 |
0.0365 (1.00) |
0.234 (1.00) |
0.141 (1.00) |
0.962 (1.00) |
0.757 (1.00) |
0.14 (1.00) |
0.0117 (1.00) |
1 (1.00) |
0.053 (1.00) |
|
OTOL1 | 8 (4%) | 216 |
0.131 (1.00) |
1 (1.00) |
0.943 (1.00) |
0.623 (1.00) |
0.145 (1.00) |
0.274 (1.00) |
0.502 (1.00) |
|||
PTEN | 7 (3%) | 217 |
0.0188 (1.00) |
0.78 (1.00) |
0.0429 (1.00) |
0.312 (1.00) |
0.636 (1.00) |
0.0334 (1.00) |
0.002 (1.00) |
0.244 (1.00) |
0.0575 (1.00) |
|
TLL1 | 15 (7%) | 209 |
0.0352 (1.00) |
0.596 (1.00) |
0.02 (1.00) |
0.0853 (1.00) |
0.236 (1.00) |
0.262 (1.00) |
0.0603 (1.00) |
0.359 (1.00) |
0.00952 (1.00) |
|
TRPC4 | 17 (8%) | 207 |
0.0046 (1.00) |
0.0827 (1.00) |
0.0139 (1.00) |
0.612 (1.00) |
0.162 (1.00) |
0.0231 (1.00) |
0.00421 (1.00) |
0.481 (1.00) |
0.171 (1.00) |
|
ATM | 25 (11%) | 199 |
0.00284 (1.00) |
0.202 (1.00) |
0.000415 (0.731) |
0.325 (1.00) |
0.395 (1.00) |
0.015 (1.00) |
0.000574 (1.00) |
0.6 (1.00) |
0.162 (1.00) |
|
GPC6 | 10 (4%) | 214 |
0.568 (1.00) |
0.636 (1.00) |
0.509 (1.00) |
0.735 (1.00) |
1 (1.00) |
0.455 (1.00) |
0.598 (1.00) |
1 (1.00) |
1 (1.00) |
|
CDH8 | 14 (6%) | 210 |
0.00207 (1.00) |
0.00139 (1.00) |
0.124 (1.00) |
0.803 (1.00) |
0.478 (1.00) |
0.0504 (1.00) |
0.00103 (1.00) |
1 (1.00) |
1 (1.00) |
|
MGC26647 | 7 (3%) | 217 |
0.275 (1.00) |
0.78 (1.00) |
0.0498 (1.00) |
0.579 (1.00) |
0.741 (1.00) |
0.574 (1.00) |
0.15 (1.00) |
1 (1.00) |
0.351 (1.00) |
|
DKK4 | 7 (3%) | 217 |
0.297 (1.00) |
0.165 (1.00) |
0.402 (1.00) |
1 (1.00) |
1 (1.00) |
0.647 (1.00) |
0.575 (1.00) |
1 (1.00) |
1 (1.00) |
|
PTPRM | 20 (9%) | 204 |
0.0446 (1.00) |
0.0145 (1.00) |
0.00293 (1.00) |
0.327 (1.00) |
0.568 (1.00) |
0.0772 (1.00) |
0.000589 (1.00) |
0.523 (1.00) |
0.0381 (1.00) |
|
AFF2 | 17 (8%) | 207 |
0.0472 (1.00) |
0.0612 (1.00) |
0.201 (1.00) |
0.528 (1.00) |
0.119 (1.00) |
0.0331 (1.00) |
0.0497 (1.00) |
0.481 (1.00) |
0.255 (1.00) |
|
NCAM2 | 12 (5%) | 212 |
0.0109 (1.00) |
0.451 (1.00) |
0.0617 (1.00) |
1 (1.00) |
1 (1.00) |
0.323 (1.00) |
0.00407 (1.00) |
1 (1.00) |
0.0387 (1.00) |
|
OR2M4 | 8 (4%) | 216 |
0.00906 (1.00) |
0.267 (1.00) |
0.0382 (1.00) |
0.463 (1.00) |
0.741 (1.00) |
0.0152 (1.00) |
0.242 (1.00) |
1 (1.00) |
0.502 (1.00) |
|
RYR2 | 29 (13%) | 195 |
0.0366 (1.00) |
0.248 (1.00) |
0.0195 (1.00) |
0.0123 (1.00) |
0.871 (1.00) |
0.0534 (1.00) |
0.00107 (1.00) |
0.6 (1.00) |
0.0755 (1.00) |
|
CDH9 | 15 (7%) | 209 |
0.153 (1.00) |
0.288 (1.00) |
0.0226 (1.00) |
0.0231 (1.00) |
0.449 (1.00) |
0.0952 (1.00) |
0.0294 (1.00) |
1 (1.00) |
0.158 (1.00) |
|
GRIK3 | 17 (8%) | 207 |
0.00763 (1.00) |
0.00174 (1.00) |
0.196 (1.00) |
0.163 (1.00) |
0.497 (1.00) |
0.148 (1.00) |
0.137 (1.00) |
1 (1.00) |
0.711 (1.00) |
|
ELF3 | 6 (3%) | 218 |
0.311 (1.00) |
1 (1.00) |
0.0514 (1.00) |
0.668 (1.00) |
0.318 (1.00) |
0.0509 (1.00) |
0.0382 (1.00) |
1 (1.00) |
0.406 (1.00) |
|
TRPS1 | 17 (8%) | 207 |
0.00936 (1.00) |
0.071 (1.00) |
0.00133 (1.00) |
0.0459 (1.00) |
1 (1.00) |
0.0101 (1.00) |
0.00057 (0.999) |
0.458 (1.00) |
0.354 (1.00) |
|
FAM133A | 7 (3%) | 217 |
0.319 (1.00) |
0.78 (1.00) |
0.0183 (1.00) |
0.215 (1.00) |
0.636 (1.00) |
0.0783 (1.00) |
1 (1.00) |
1 (1.00) |
0.456 (1.00) |
|
IL1RAPL2 | 10 (4%) | 214 |
0.334 (1.00) |
0.636 (1.00) |
0.0473 (1.00) |
0.387 (1.00) |
0.817 (1.00) |
0.255 (1.00) |
0.398 (1.00) |
0.0412 (1.00) |
1 (1.00) |
|
CCBP2 | 10 (4%) | 214 |
0.149 (1.00) |
0.267 (1.00) |
0.623 (1.00) |
0.134 (1.00) |
0.905 (1.00) |
0.635 (1.00) |
0.398 (1.00) |
1 (1.00) |
0.162 (1.00) |
|
OPCML | 10 (4%) | 214 |
0.321 (1.00) |
0.267 (1.00) |
0.543 (1.00) |
0.387 (1.00) |
0.236 (1.00) |
0.352 (1.00) |
0.543 (1.00) |
1 (1.00) |
0.0935 (1.00) |
|
CDH18 | 13 (6%) | 211 |
0.00173 (1.00) |
0.273 (1.00) |
0.0984 (1.00) |
0.0515 (1.00) |
0.905 (1.00) |
0.0996 (1.00) |
0.0493 (1.00) |
1 (1.00) |
0.62 (1.00) |
|
OR2L13 | 10 (4%) | 214 |
0.237 (1.00) |
0.599 (1.00) |
0.0275 (1.00) |
0.134 (1.00) |
0.739 (1.00) |
0.123 (1.00) |
0.221 (1.00) |
1 (1.00) |
1 (1.00) |
|
BAI3 | 18 (8%) | 206 |
0.00719 (1.00) |
0.47 (1.00) |
0.423 (1.00) |
0.592 (1.00) |
1 (1.00) |
0.304 (1.00) |
0.207 (1.00) |
1 (1.00) |
0.255 (1.00) |
|
MGC42105 | 11 (5%) | 213 |
0.00139 (1.00) |
0.172 (1.00) |
0.147 (1.00) |
0.0753 (1.00) |
0.119 (1.00) |
0.0167 (1.00) |
0.00422 (1.00) |
1 (1.00) |
1 (1.00) |
|
TXNDC3 | 11 (5%) | 213 |
0.00269 (1.00) |
0.293 (1.00) |
0.0125 (1.00) |
1 (1.00) |
0.0299 (1.00) |
0.0918 (1.00) |
0.00398 (1.00) |
1 (1.00) |
0.00311 (1.00) |
|
LPPR4 | 13 (6%) | 211 |
0.074 (1.00) |
0.0357 (1.00) |
0.0342 (1.00) |
0.799 (1.00) |
0.525 (1.00) |
0.223 (1.00) |
0.0738 (1.00) |
1 (1.00) |
0.653 (1.00) |
|
UNC13C | 17 (8%) | 207 |
0.00713 (1.00) |
0.217 (1.00) |
0.0257 (1.00) |
0.0567 (1.00) |
0.86 (1.00) |
0.0612 (1.00) |
0.0827 (1.00) |
1 (1.00) |
0.255 (1.00) |
|
SCN7A | 15 (7%) | 209 |
0.000649 (1.00) |
0.0609 (1.00) |
0.0492 (1.00) |
0.299 (1.00) |
0.913 (1.00) |
0.0111 (1.00) |
0.00632 (1.00) |
1 (1.00) |
0.205 (1.00) |
|
ACOT4 | 3 (1%) | 221 |
0.296 (1.00) |
0.302 (1.00) |
0.829 (1.00) |
1 (1.00) |
0.0713 (1.00) |
1 (1.00) |
1 (1.00) |
|||
GGT1 | 3 (1%) | 221 |
0.254 (1.00) |
0.184 (1.00) |
0.377 (1.00) |
1 (1.00) |
1 (1.00) |
|||||
GRIA1 | 15 (7%) | 209 |
0.0535 (1.00) |
0.32 (1.00) |
0.0104 (1.00) |
0.558 (1.00) |
1 (1.00) |
0.0272 (1.00) |
0.00324 (1.00) |
1 (1.00) |
0.0226 (1.00) |
|
ING1 | 6 (3%) | 218 |
0.291 (1.00) |
0.709 (1.00) |
0.628 (1.00) |
0.458 (1.00) |
0.203 (1.00) |
1 (1.00) |
0.406 (1.00) |
|||
PCDHA10 | 10 (4%) | 214 |
0.079 (1.00) |
0.355 (1.00) |
0.108 (1.00) |
0.62 (1.00) |
0.0318 (1.00) |
1 (1.00) |
0.545 (1.00) |
|||
ZNF208 | 11 (5%) | 213 |
0.182 (1.00) |
1 (1.00) |
0.249 (1.00) |
0.558 (1.00) |
1 (1.00) |
0.399 (1.00) |
0.628 (1.00) |
1 (1.00) |
0.114 (1.00) |
|
CRTC1 | 6 (3%) | 218 |
0.122 (1.00) |
0.0889 (1.00) |
0.837 (1.00) |
0.312 (1.00) |
0.636 (1.00) |
0.228 (1.00) |
0.725 (1.00) |
1 (1.00) |
0.406 (1.00) |
|
FAM5C | 13 (6%) | 211 |
0.0975 (1.00) |
0.601 (1.00) |
0.0186 (1.00) |
0.0231 (1.00) |
0.143 (1.00) |
0.466 (1.00) |
0.0353 (1.00) |
0.0711 (1.00) |
0.653 (1.00) |
|
FAM22F | 9 (4%) | 215 |
0.69 (1.00) |
0.0958 (1.00) |
1 (1.00) |
0.915 (1.00) |
0.871 (1.00) |
0.749 (1.00) |
0.456 (1.00) |
1 (1.00) |
1 (1.00) |
|
CHRDL1 | 11 (5%) | 213 |
0.166 (1.00) |
0.821 (1.00) |
0.472 (1.00) |
0.246 (1.00) |
1 (1.00) |
0.215 (1.00) |
0.916 (1.00) |
1 (1.00) |
0.584 (1.00) |
|
EDNRB | 10 (4%) | 214 |
0.0629 (1.00) |
1 (1.00) |
0.757 (1.00) |
0.0128 (1.00) |
0.905 (1.00) |
0.839 (1.00) |
0.0982 (1.00) |
1 (1.00) |
0.545 (1.00) |
|
IFT80 | 10 (4%) | 214 |
0.0879 (1.00) |
0.78 (1.00) |
0.254 (1.00) |
0.347 (1.00) |
0.0523 (1.00) |
0.304 (1.00) |
0.162 (1.00) |
|||
ANK2 | 30 (13%) | 194 |
0.000689 (1.00) |
0.000889 (1.00) |
0.0015 (1.00) |
0.028 (1.00) |
0.614 (1.00) |
0.000963 (1.00) |
0.000734 (1.00) |
1 (1.00) |
0.0416 (1.00) |
|
CASP14 | 8 (4%) | 216 |
1 (1.00) |
0.23 (1.00) |
0.889 (1.00) |
1 (1.00) |
1 (1.00) |
0.526 (1.00) |
0.464 (1.00) |
0.274 (1.00) |
1 (1.00) |
|
LASS3 | 9 (4%) | 215 |
0.00355 (1.00) |
0.28 (1.00) |
0.104 (1.00) |
0.0946 (1.00) |
1 (1.00) |
0.0548 (1.00) |
0.0306 (1.00) |
1 (1.00) |
0.0747 (1.00) |
|
P2RY10 | 7 (3%) | 217 |
0.66 (1.00) |
0.402 (1.00) |
0.402 (1.00) |
0.459 (1.00) |
1 (1.00) |
0.237 (1.00) |
0.499 (1.00) |
1 (1.00) |
1 (1.00) |
|
CNTN1 | 14 (6%) | 210 |
0.0164 (1.00) |
0.193 (1.00) |
0.00405 (1.00) |
0.876 (1.00) |
0.696 (1.00) |
0.146 (1.00) |
0.00159 (1.00) |
1 (1.00) |
0.181 (1.00) |
|
ISL1 | 8 (4%) | 216 |
0.302 (1.00) |
0.452 (1.00) |
0.435 (1.00) |
1 (1.00) |
1 (1.00) |
0.235 (1.00) |
0.242 (1.00) |
1 (1.00) |
0.502 (1.00) |
|
ARID2 | 15 (7%) | 209 |
0.208 (1.00) |
0.221 (1.00) |
0.0254 (1.00) |
0.0459 (1.00) |
0.905 (1.00) |
0.231 (1.00) |
0.00632 (1.00) |
1 (1.00) |
0.0638 (1.00) |
|
EIF4A2 | 5 (2%) | 219 |
0.647 (1.00) |
0.182 (1.00) |
0.73 (1.00) |
0.558 (1.00) |
0.636 (1.00) |
0.216 (1.00) |
0.288 (1.00) |
1 (1.00) |
0.141 (1.00) |
|
CDH11 | 14 (6%) | 210 |
0.061 (1.00) |
0.273 (1.00) |
0.0175 (1.00) |
1 (1.00) |
1 (1.00) |
0.147 (1.00) |
0.0353 (1.00) |
0.385 (1.00) |
1 (1.00) |
|
CHST9 | 8 (4%) | 216 |
0.0111 (1.00) |
0.8 (1.00) |
0.0706 (1.00) |
0.0144 (1.00) |
0.0988 (1.00) |
1 (1.00) |
0.456 (1.00) |
|||
HTR3B | 6 (3%) | 218 |
0.13 (1.00) |
0.646 (1.00) |
0.628 (1.00) |
0.00853 (1.00) |
0.636 (1.00) |
0.587 (1.00) |
0.367 (1.00) |
1 (1.00) |
0.351 (1.00) |
|
LRRIQ3 | 10 (4%) | 214 |
0.167 (1.00) |
0.697 (1.00) |
0.157 (1.00) |
0.232 (1.00) |
0.437 (1.00) |
0.467 (1.00) |
0.221 (1.00) |
1 (1.00) |
0.114 (1.00) |
|
HCN1 | 10 (4%) | 214 |
0.344 (1.00) |
0.707 (1.00) |
0.0201 (1.00) |
0.735 (1.00) |
1 (1.00) |
0.24 (1.00) |
0.0423 (1.00) |
1 (1.00) |
1 (1.00) |
|
CHRM2 | 10 (4%) | 214 |
0.338 (1.00) |
0.599 (1.00) |
0.115 (1.00) |
0.648 (1.00) |
1 (1.00) |
0.123 (1.00) |
0.00607 (1.00) |
1 (1.00) |
0.545 (1.00) |
|
DACH2 | 12 (5%) | 212 |
0.123 (1.00) |
0.347 (1.00) |
0.256 (1.00) |
0.78 (1.00) |
0.0575 (1.00) |
1 (1.00) |
0.114 (1.00) |
|||
PCDH11X | 14 (6%) | 210 |
0.0179 (1.00) |
0.521 (1.00) |
0.107 (1.00) |
0.681 (1.00) |
1 (1.00) |
0.0559 (1.00) |
0.289 (1.00) |
1 (1.00) |
0.181 (1.00) |
|
KCNA4 | 12 (5%) | 212 |
0.101 (1.00) |
0.172 (1.00) |
0.00254 (1.00) |
0.0336 (1.00) |
0.528 (1.00) |
0.0486 (1.00) |
0.00407 (1.00) |
1 (1.00) |
0.584 (1.00) |
|
DPP10 | 13 (6%) | 211 |
0.00128 (1.00) |
0.601 (1.00) |
0.0895 (1.00) |
0.699 (1.00) |
0.542 (1.00) |
0.276 (1.00) |
0.0493 (1.00) |
0.385 (1.00) |
0.158 (1.00) |
|
EVC2 | 17 (8%) | 207 |
0.00338 (1.00) |
0.00644 (1.00) |
0.0383 (1.00) |
0.255 (1.00) |
0.144 (1.00) |
0.0125 (1.00) |
0.0597 (1.00) |
1 (1.00) |
0.711 (1.00) |
|
C15ORF2 | 12 (5%) | 212 |
0.0174 (1.00) |
0.452 (1.00) |
0.166 (1.00) |
0.232 (1.00) |
0.152 (1.00) |
0.131 (1.00) |
0.00398 (1.00) |
0.304 (1.00) |
0.0492 (1.00) |
|
NLRP5 | 12 (5%) | 212 |
0.159 (1.00) |
1 (1.00) |
0.0649 (1.00) |
0.025 (1.00) |
0.15 (1.00) |
0.00618 (1.00) |
0.0297 (1.00) |
1 (1.00) |
0.584 (1.00) |
|
BTNL8 | 3 (1%) | 221 |
0.296 (1.00) |
0.302 (1.00) |
0.254 (1.00) |
0.215 (1.00) |
1 (1.00) |
0.184 (1.00) |
0.227 (1.00) |
1 (1.00) |
1 (1.00) |
|
KLK2 | 3 (1%) | 221 |
0.468 (1.00) |
0.302 (1.00) |
0.829 (1.00) |
0.327 (1.00) |
0.227 (1.00) |
1 (1.00) |
||||
LUZP2 | 6 (3%) | 218 |
0.0835 (1.00) |
0.202 (1.00) |
0.175 (1.00) |
0.126 (1.00) |
0.418 (1.00) |
0.182 (1.00) |
0.85 (1.00) |
1 (1.00) |
1 (1.00) |
|
NXF5 | 7 (3%) | 217 |
0.243 (1.00) |
0.863 (1.00) |
0.425 (1.00) |
0.215 (1.00) |
1 (1.00) |
0.732 (1.00) |
0.575 (1.00) |
1 (1.00) |
0.0421 (1.00) |
|
PCDHB5 | 14 (6%) | 210 |
0.148 (1.00) |
0.573 (1.00) |
0.0582 (1.00) |
0.492 (1.00) |
0.227 (1.00) |
0.211 (1.00) |
0.0185 (1.00) |
0.385 (1.00) |
0.653 (1.00) |
|
LOXL2 | 9 (4%) | 215 |
0.653 (1.00) |
0.707 (1.00) |
0.191 (1.00) |
0.0316 (1.00) |
0.328 (1.00) |
0.0156 (1.00) |
0.363 (1.00) |
1 (1.00) |
0.32 (1.00) |
|
UBQLNL | 5 (2%) | 219 |
0.12 (1.00) |
0.173 (1.00) |
1 (1.00) |
0.133 (1.00) |
0.164 (1.00) |
1 (1.00) |
1 (1.00) |
|||
MYO1B | 13 (6%) | 211 |
0.00916 (1.00) |
0.0199 (1.00) |
0.00752 (1.00) |
0.0284 (1.00) |
1 (1.00) |
0.0119 (1.00) |
0.0108 (1.00) |
1 (1.00) |
0.653 (1.00) |
|
SPATA17 | 9 (4%) | 215 |
0.102 (1.00) |
0.486 (1.00) |
0.0519 (1.00) |
1 (1.00) |
0.817 (1.00) |
0.288 (1.00) |
0.0637 (1.00) |
1 (1.00) |
1 (1.00) |
|
COL12A1 | 21 (9%) | 203 |
0.01 (1.00) |
0.505 (1.00) |
0.0451 (1.00) |
0.148 (1.00) |
1 (1.00) |
0.0684 (1.00) |
0.0351 (1.00) |
0.523 (1.00) |
0.0753 (1.00) |
|
JAKMIP2 | 13 (6%) | 211 |
0.0146 (1.00) |
0.273 (1.00) |
0.0855 (1.00) |
0.283 (1.00) |
0.173 (1.00) |
0.0258 (1.00) |
0.0261 (1.00) |
0.385 (1.00) |
0.158 (1.00) |
|
EPHA5 | 13 (6%) | 211 |
0.0611 (1.00) |
0.117 (1.00) |
0.0666 (1.00) |
0.283 (1.00) |
0.452 (1.00) |
0.0612 (1.00) |
0.00538 (1.00) |
1 (1.00) |
0.653 (1.00) |
|
ODZ1 | 22 (10%) | 202 |
0.376 (1.00) |
0.312 (1.00) |
0.0474 (1.00) |
0.918 (1.00) |
0.413 (1.00) |
0.00842 (1.00) |
0.000214 (0.38) |
0.204 (1.00) |
0.669 (1.00) |
|
POSTN | 11 (5%) | 213 |
0.0193 (1.00) |
0.108 (1.00) |
0.272 (1.00) |
0.681 (1.00) |
0.636 (1.00) |
0.407 (1.00) |
0.318 (1.00) |
1 (1.00) |
1 (1.00) |
|
ZCWPW2 | 7 (3%) | 217 |
0.344 (1.00) |
0.517 (1.00) |
1 (1.00) |
0.903 (1.00) |
0.437 (1.00) |
0.844 (1.00) |
0.367 (1.00) |
1 (1.00) |
0.104 (1.00) |
|
ZEB2 | 15 (7%) | 209 |
0.0402 (1.00) |
0.761 (1.00) |
0.164 (1.00) |
0.559 (1.00) |
1 (1.00) |
0.131 (1.00) |
0.0135 (1.00) |
0.385 (1.00) |
0.653 (1.00) |
|
TUSC3 | 7 (3%) | 217 |
0.00548 (1.00) |
0.136 (1.00) |
0.04 (1.00) |
0.558 (1.00) |
1 (1.00) |
0.0194 (1.00) |
0.000529 (0.929) |
1 (1.00) |
0.00375 (1.00) |
|
CACNG7 | 6 (3%) | 218 |
0.596 (1.00) |
0.322 (1.00) |
0.363 (1.00) |
0.126 (1.00) |
0.0541 (1.00) |
0.0605 (1.00) |
0.622 (1.00) |
1 (1.00) |
0.213 (1.00) |
|
RWDD2B | 8 (4%) | 216 |
0.0518 (1.00) |
0.8 (1.00) |
0.182 (1.00) |
0.494 (1.00) |
0.242 (1.00) |
1 (1.00) |
0.00375 (1.00) |
|||
SLC25A13 | 7 (3%) | 217 |
0.14 (1.00) |
0.349 (1.00) |
0.425 (1.00) |
0.232 (1.00) |
0.236 (1.00) |
0.381 (1.00) |
0.363 (1.00) |
1 (1.00) |
0.0421 (1.00) |
|
DPF2 | 4 (2%) | 220 |
0.468 (1.00) |
0.302 (1.00) |
0.381 (1.00) |
0.215 (1.00) |
0.0777 (1.00) |
0.327 (1.00) |
1 (1.00) |
1 (1.00) |
0.141 (1.00) |
|
PCDH10 | 17 (8%) | 207 |
0.0868 (1.00) |
0.113 (1.00) |
0.0139 (1.00) |
0.336 (1.00) |
0.696 (1.00) |
0.106 (1.00) |
0.000559 (0.98) |
1 (1.00) |
0.23 (1.00) |
|
CDH12 | 13 (6%) | 211 |
0.00479 (1.00) |
0.32 (1.00) |
0.0874 (1.00) |
0.0946 (1.00) |
0.236 (1.00) |
0.0186 (1.00) |
0.00927 (1.00) |
1 (1.00) |
0.00946 (1.00) |
|
MCF2 | 12 (5%) | 212 |
0.0808 (1.00) |
0.273 (1.00) |
0.263 (1.00) |
0.281 (1.00) |
0.817 (1.00) |
0.418 (1.00) |
0.121 (1.00) |
1 (1.00) |
0.135 (1.00) |
|
NCKAP5 | 15 (7%) | 209 |
0.0233 (1.00) |
0.0161 (1.00) |
0.131 (1.00) |
0.00216 (1.00) |
0.905 (1.00) |
0.0606 (1.00) |
0.000936 (1.00) |
1 (1.00) |
0.711 (1.00) |
|
RIMS2 | 13 (6%) | 211 |
0.00174 (1.00) |
0.32 (1.00) |
0.000306 (0.543) |
0.273 (1.00) |
1 (1.00) |
0.00301 (1.00) |
0.00538 (1.00) |
1 (1.00) |
0.653 (1.00) |
|
ATP7A | 6 (3%) | 218 |
0.703 (1.00) |
1 (1.00) |
0.917 (1.00) |
0.205 (1.00) |
0.418 (1.00) |
0.844 (1.00) |
0.85 (1.00) |
1 (1.00) |
1 (1.00) |
|
TPTE | 12 (5%) | 212 |
0.109 (1.00) |
0.461 (1.00) |
0.000369 (0.653) |
0.519 (1.00) |
1 (1.00) |
0.000818 (1.00) |
0.000394 (0.695) |
1 (1.00) |
0.62 (1.00) |
|
OR8B4 | 6 (3%) | 218 |
0.0679 (1.00) |
0.407 (1.00) |
0.206 (1.00) |
0.458 (1.00) |
0.203 (1.00) |
1 (1.00) |
0.351 (1.00) |
|||
SFMBT2 | 13 (6%) | 211 |
0.541 (1.00) |
0.273 (1.00) |
0.387 (1.00) |
0.767 (1.00) |
1 (1.00) |
0.264 (1.00) |
0.00927 (1.00) |
1 (1.00) |
0.683 (1.00) |
|
FLRT2 | 13 (6%) | 211 |
0.138 (1.00) |
1 (1.00) |
0.019 (1.00) |
0.0552 (1.00) |
1 (1.00) |
0.369 (1.00) |
0.481 (1.00) |
1 (1.00) |
0.135 (1.00) |
|
BCHE | 9 (4%) | 215 |
0.0539 (1.00) |
0.27 (1.00) |
0.314 (1.00) |
1 (1.00) |
1 (1.00) |
0.727 (1.00) |
0.0126 (1.00) |
1 (1.00) |
1 (1.00) |
|
C8B | 10 (4%) | 214 |
0.0767 (1.00) |
0.27 (1.00) |
0.757 (1.00) |
0.668 (1.00) |
1 (1.00) |
0.635 (1.00) |
0.221 (1.00) |
1 (1.00) |
1 (1.00) |
|
FREM2 | 23 (10%) | 201 |
0.217 (1.00) |
0.381 (1.00) |
0.299 (1.00) |
0.105 (1.00) |
0.542 (1.00) |
0.384 (1.00) |
0.716 (1.00) |
0.6 (1.00) |
0.409 (1.00) |
|
ZNF167 | 7 (3%) | 217 |
0.275 (1.00) |
1 (1.00) |
0.0498 (1.00) |
0.825 (1.00) |
1 (1.00) |
0.237 (1.00) |
0.0163 (1.00) |
1 (1.00) |
0.406 (1.00) |
|
GABRG1 | 8 (4%) | 216 |
0.561 (1.00) |
0.707 (1.00) |
0.459 (1.00) |
0.474 (1.00) |
0.817 (1.00) |
0.126 (1.00) |
0.242 (1.00) |
1 (1.00) |
0.0747 (1.00) |
|
SAT1 | 4 (2%) | 220 |
0.00272 (1.00) |
0.0515 (1.00) |
0.0742 (1.00) |
0.825 (1.00) |
0.193 (1.00) |
0.0024 (1.00) |
0.0734 (1.00) |
1 (1.00) |
1 (1.00) |
|
CHD4 | 17 (8%) | 207 |
0.00951 (1.00) |
0.171 (1.00) |
0.000862 (1.00) |
0.492 (1.00) |
0.913 (1.00) |
0.000324 (0.574) |
0.000812 (1.00) |
1 (1.00) |
0.0101 (1.00) |
|
PCDHB2 | 14 (6%) | 210 |
0.0102 (1.00) |
0.0106 (1.00) |
0.0175 (1.00) |
0.648 (1.00) |
1 (1.00) |
0.0218 (1.00) |
0.00324 (1.00) |
1 (1.00) |
0.653 (1.00) |
|
TMTC1 | 13 (6%) | 211 |
0.169 (1.00) |
0.273 (1.00) |
0.0147 (1.00) |
0.0504 (1.00) |
0.328 (1.00) |
0.0836 (1.00) |
0.00538 (1.00) |
0.385 (1.00) |
0.158 (1.00) |
|
SH3GL3 | 8 (4%) | 216 |
0.102 (1.00) |
1 (1.00) |
0.596 (1.00) |
0.463 (1.00) |
1 (1.00) |
0.742 (1.00) |
0.464 (1.00) |
1 (1.00) |
0.133 (1.00) |
|
ZFPM2 | 6 (3%) | 218 |
0.0235 (1.00) |
0.646 (1.00) |
0.541 (1.00) |
0.0487 (1.00) |
0.318 (1.00) |
0.338 (1.00) |
0.164 (1.00) |
1 (1.00) |
0.0549 (1.00) |
|
CACNG3 | 8 (4%) | 216 |
0.0174 (1.00) |
0.27 (1.00) |
0.00923 (1.00) |
0.025 (1.00) |
0.318 (1.00) |
0.126 (1.00) |
0.0988 (1.00) |
0.274 (1.00) |
0.0747 (1.00) |
|
POTEB | 8 (4%) | 216 |
0.307 (1.00) |
0.517 (1.00) |
0.287 (1.00) |
0.0388 (1.00) |
0.0125 (1.00) |
1 (1.00) |
1 (1.00) |
|||
GRIN2A | 19 (8%) | 205 |
0.392 (1.00) |
0.369 (1.00) |
0.0439 (1.00) |
0.592 (1.00) |
0.86 (1.00) |
0.357 (1.00) |
0.0648 (1.00) |
0.481 (1.00) |
0.76 (1.00) |
|
NRXN3 | 17 (8%) | 207 |
0.000398 (0.701) |
0.0827 (1.00) |
0.00293 (1.00) |
0.916 (1.00) |
0.179 (1.00) |
0.00121 (1.00) |
0.00057 (0.999) |
1 (1.00) |
0.736 (1.00) |
|
OR7C1 | 6 (3%) | 218 |
0.13 (1.00) |
0.0134 (1.00) |
0.541 (1.00) |
0.128 (1.00) |
0.0683 (1.00) |
1 (1.00) |
0.406 (1.00) |
|||
SPATA8 | 3 (1%) | 221 |
0.312 (1.00) |
0.439 (1.00) |
0.751 (1.00) |
1 (1.00) |
0.104 (1.00) |
|||||
OR2M2 | 6 (3%) | 218 |
0.809 (1.00) |
0.562 (1.00) |
0.917 (1.00) |
0.528 (1.00) |
0.203 (1.00) |
1 (1.00) |
0.351 (1.00) |
|||
SORCS1 | 15 (7%) | 209 |
0.236 (1.00) |
0.0518 (1.00) |
0.131 (1.00) |
0.936 (1.00) |
0.605 (1.00) |
0.149 (1.00) |
0.00632 (1.00) |
1 (1.00) |
0.205 (1.00) |
|
IL18R1 | 10 (4%) | 214 |
0.0354 (1.00) |
0.486 (1.00) |
0.254 (1.00) |
0.463 (1.00) |
1 (1.00) |
0.186 (1.00) |
0.0724 (1.00) |
1 (1.00) |
0.114 (1.00) |
|
DPY19L1 | 5 (2%) | 219 |
0.00985 (1.00) |
0.34 (1.00) |
0.194 (1.00) |
0.137 (1.00) |
1 (1.00) |
0.0911 (1.00) |
0.000861 (1.00) |
1 (1.00) |
0.292 (1.00) |
|
C16ORF45 | 3 (1%) | 221 |
0.137 (1.00) |
0.594 (1.00) |
0.108 (1.00) |
0.145 (1.00) |
0.227 (1.00) |
1 (1.00) |
1 (1.00) |
|||
INHBA | 9 (4%) | 215 |
0.00486 (1.00) |
0.27 (1.00) |
0.0706 (1.00) |
0.0318 (1.00) |
0.00354 (1.00) |
0.025 (1.00) |
0.0575 (1.00) |
|||
MIER3 | 11 (5%) | 213 |
0.000174 (0.309) |
0.0182 (1.00) |
0.00207 (1.00) |
0.799 (1.00) |
1 (1.00) |
0.00185 (1.00) |
0.00057 (0.999) |
1 (1.00) |
0.62 (1.00) |
|
ZNF585A | 10 (4%) | 214 |
0.00256 (1.00) |
0.293 (1.00) |
0.00451 (1.00) |
0.463 (1.00) |
0.0666 (1.00) |
0.0025 (1.00) |
0.000975 (1.00) |
1 (1.00) |
0.0935 (1.00) |
|
TMPRSS13 | 4 (2%) | 220 |
0.386 (1.00) |
1 (1.00) |
0.11 (1.00) |
0.21 (1.00) |
0.807 (1.00) |
1 (1.00) |
0.292 (1.00) |
|||
FSTL5 | 11 (5%) | 213 |
0.0556 (1.00) |
0.172 (1.00) |
0.0316 (1.00) |
0.355 (1.00) |
0.542 (1.00) |
0.0399 (1.00) |
0.034 (1.00) |
1 (1.00) |
0.193 (1.00) |
|
DOK5 | 6 (3%) | 218 |
0.893 (1.00) |
0.481 (1.00) |
0.628 (1.00) |
0.459 (1.00) |
1 (1.00) |
0.0605 (1.00) |
0.367 (1.00) |
1 (1.00) |
0.213 (1.00) |
|
ZNF99 | 11 (5%) | 213 |
0.0467 (1.00) |
0.697 (1.00) |
0.0153 (1.00) |
0.137 (1.00) |
0.636 (1.00) |
0.00669 (1.00) |
0.00936 (1.00) |
1 (1.00) |
0.0387 (1.00) |
|
GML | 6 (3%) | 218 |
0.412 (1.00) |
0.0684 (1.00) |
0.628 (1.00) |
0.458 (1.00) |
0.00787 (1.00) |
1 (1.00) |
1 (1.00) |
|||
B2M | 5 (2%) | 219 |
0.0413 (1.00) |
0.661 (1.00) |
0.0452 (1.00) |
0.215 (1.00) |
1 (1.00) |
0.0911 (1.00) |
0.0143 (1.00) |
1 (1.00) |
0.0288 (1.00) |
|
PPP2R2B | 3 (1%) | 221 |
0.468 (1.00) |
1 (1.00) |
0.445 (1.00) |
1 (1.00) |
0.377 (1.00) |
1 (1.00) |
0.228 (1.00) |
|||
LRTM1 | 7 (3%) | 217 |
0.0879 (1.00) |
0.458 (1.00) |
0.402 (1.00) |
0.647 (1.00) |
0.0835 (1.00) |
1 (1.00) |
0.351 (1.00) |
|||
OR10G9 | 6 (3%) | 218 |
0.238 (1.00) |
0.709 (1.00) |
0.206 (1.00) |
0.458 (1.00) |
0.0365 (1.00) |
1 (1.00) |
0.351 (1.00) |
|||
ERBB3 | 14 (6%) | 210 |
0.14 (1.00) |
0.0872 (1.00) |
0.124 (1.00) |
0.947 (1.00) |
0.739 (1.00) |
0.167 (1.00) |
0.0185 (1.00) |
1 (1.00) |
0.158 (1.00) |
|
PSG8 | 8 (4%) | 216 |
0.893 (1.00) |
0.0889 (1.00) |
0.107 (1.00) |
0.437 (1.00) |
0.411 (1.00) |
0.244 (1.00) |
0.249 (1.00) |
|||
SYT16 | 9 (4%) | 215 |
0.071 (1.00) |
0.209 (1.00) |
0.182 (1.00) |
0.0336 (1.00) |
0.528 (1.00) |
0.115 (1.00) |
0.219 (1.00) |
0.304 (1.00) |
0.545 (1.00) |
|
LPHN3 | 13 (6%) | 211 |
0.00292 (1.00) |
0.252 (1.00) |
0.387 (1.00) |
0.148 (1.00) |
1 (1.00) |
0.327 (1.00) |
0.00927 (1.00) |
1 (1.00) |
0.135 (1.00) |
|
LRP2 | 35 (16%) | 189 |
0.00181 (1.00) |
0.0383 (1.00) |
0.0014 (1.00) |
0.523 (1.00) |
0.826 (1.00) |
0.0874 (1.00) |
0.0023 (1.00) |
0.342 (1.00) |
0.277 (1.00) |
|
SOHLH2 | 9 (4%) | 215 |
0.859 (1.00) |
0.0418 (1.00) |
0.327 (1.00) |
0.0219 (1.00) |
0.297 (1.00) |
0.0708 (1.00) |
0.0908 (1.00) |
1 (1.00) |
0.502 (1.00) |
|
ZIM3 | 9 (4%) | 215 |
0.0606 (1.00) |
0.9 (1.00) |
0.119 (1.00) |
0.00743 (1.00) |
0.817 (1.00) |
0.206 (1.00) |
0.57 (1.00) |
1 (1.00) |
0.0285 (1.00) |
|
DSEL | 14 (6%) | 210 |
0.0128 (1.00) |
0.193 (1.00) |
0.00117 (1.00) |
0.336 (1.00) |
1 (1.00) |
0.0815 (1.00) |
0.0185 (1.00) |
1 (1.00) |
0.158 (1.00) |
|
RNASE11 | 5 (2%) | 219 |
0.767 (1.00) |
0.709 (1.00) |
0.148 (1.00) |
0.81 (1.00) |
0.164 (1.00) |
1 (1.00) |
0.0177 (1.00) |
|||
MDGA2 | 10 (4%) | 214 |
0.102 (1.00) |
0.124 (1.00) |
0.0201 (1.00) |
0.735 (1.00) |
0.817 (1.00) |
0.058 (1.00) |
0.00422 (1.00) |
0.304 (1.00) |
1 (1.00) |
|
RBMS3 | 6 (3%) | 218 |
0.291 (1.00) |
0.842 (1.00) |
1 (1.00) |
0.844 (1.00) |
0.367 (1.00) |
1 (1.00) |
0.406 (1.00) |
|||
COL6A6 | 16 (7%) | 208 |
0.0547 (1.00) |
0.573 (1.00) |
0.00426 (1.00) |
0.484 (1.00) |
0.452 (1.00) |
0.0375 (1.00) |
0.0294 (1.00) |
0.458 (1.00) |
0.736 (1.00) |
|
TMBIM4 | 4 (2%) | 220 |
1 (1.00) |
0.322 (1.00) |
0.65 (1.00) |
0.528 (1.00) |
1 (1.00) |
1 (1.00) |
1 (1.00) |
|||
FAM135B | 15 (7%) | 209 |
0.0516 (1.00) |
0.273 (1.00) |
0.116 (1.00) |
0.772 (1.00) |
0.696 (1.00) |
0.00639 (1.00) |
0.00324 (1.00) |
0.107 (1.00) |
0.354 (1.00) |
|
CYP7B1 | 7 (3%) | 217 |
0.00985 (1.00) |
0.0462 (1.00) |
0.108 (1.00) |
0.00513 (1.00) |
1 (1.00) |
0.105 (1.00) |
0.00142 (1.00) |
1 (1.00) |
0.351 (1.00) |
|
SLC16A7 | 9 (4%) | 215 |
0.0275 (1.00) |
0.486 (1.00) |
0.119 (1.00) |
1 (1.00) |
0.297 (1.00) |
0.347 (1.00) |
0.0908 (1.00) |
1 (1.00) |
0.0747 (1.00) |
P value = 0.000122 (Fisher's exact test), Q value = 0.22
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 86 | 83 | 36 | 16 |
FBXW7 MUTATED | 4 | 24 | 8 | 2 |
FBXW7 WILD-TYPE | 82 | 59 | 28 | 14 |
P value = 1.13e-06 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 58 | 44 | 68 | 37 |
BRAF MUTATED | 1 | 13 | 1 | 5 |
BRAF WILD-TYPE | 57 | 31 | 67 | 32 |
P value = 1.26e-07 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 59 | 106 |
BRAF MUTATED | 1 | 17 | 2 |
BRAF WILD-TYPE | 41 | 42 | 104 |
P value = 4.17e-05 (Fisher's exact test), Q value = 0.075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 86 | 83 | 36 | 16 |
BRAF MUTATED | 1 | 18 | 3 | 0 |
BRAF WILD-TYPE | 85 | 65 | 33 | 16 |
P value = 3.49e-08 (Fisher's exact test), Q value = 6.3e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 78 | 47 | 60 | 33 |
BRAF MUTATED | 1 | 16 | 5 | 0 |
BRAF WILD-TYPE | 77 | 31 | 55 | 33 |
P value = 1.92e-10 (Fisher's exact test), Q value = 3.5e-07
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
BRAF MUTATED | 19 | 2 | 1 |
BRAF WILD-TYPE | 34 | 125 | 37 |
P value = 1.94e-07 (Fisher's exact test), Q value = 0.00035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 78 | 47 | 60 | 33 |
KRAS MUTATED | 21 | 15 | 44 | 12 |
KRAS WILD-TYPE | 57 | 32 | 16 | 21 |
P value = 3.02e-07 (Fisher's exact test), Q value = 0.00055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
KRAS MUTATED | 20 | 41 | 31 |
KRAS WILD-TYPE | 33 | 86 | 7 |
P value = 7.28e-11 (Fisher's exact test), Q value = 1.3e-07
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 86 | 83 | 36 | 16 |
TP53 MUTATED | 68 | 22 | 19 | 9 |
TP53 WILD-TYPE | 18 | 61 | 17 | 7 |
P value = 6.63e-05 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 86 | 83 | 36 | 16 |
FAT4 MUTATED | 6 | 27 | 3 | 2 |
FAT4 WILD-TYPE | 80 | 56 | 33 | 14 |
P value = 3.19e-05 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 58 | 44 | 68 | 37 |
CDH2 MUTATED | 0 | 7 | 1 | 7 |
CDH2 WILD-TYPE | 58 | 37 | 67 | 30 |
P value = 5.18e-05 (Fisher's exact test), Q value = 0.093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 78 | 47 | 60 | 33 |
CDH2 MUTATED | 0 | 6 | 10 | 0 |
CDH2 WILD-TYPE | 78 | 41 | 50 | 33 |
P value = 1.1e-05 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
CDH2 MUTATED | 10 | 1 | 5 |
CDH2 WILD-TYPE | 43 | 126 | 33 |
P value = 2.36e-06 (Fisher's exact test), Q value = 0.0043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 58 | 44 | 68 | 37 |
FLG MUTATED | 0 | 14 | 6 | 8 |
FLG WILD-TYPE | 58 | 30 | 62 | 29 |
P value = 4.08e-05 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
FLG MUTATED | 18 | 9 | 5 |
FLG WILD-TYPE | 35 | 118 | 33 |
P value = 0.00013 (Fisher's exact test), Q value = 0.23
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 86 | 83 | 36 | 16 |
DNAH5 MUTATED | 4 | 24 | 4 | 2 |
DNAH5 WILD-TYPE | 82 | 59 | 32 | 14 |
P value = 7.52e-05 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 78 | 47 | 60 | 33 |
DNAH5 MUTATED | 3 | 15 | 13 | 3 |
DNAH5 WILD-TYPE | 75 | 32 | 47 | 30 |
P value = 1.52e-06 (Fisher's exact test), Q value = 0.0027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
DNAH5 MUTATED | 20 | 8 | 6 |
DNAH5 WILD-TYPE | 33 | 119 | 32 |
P value = 0.000102 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
SDK1 MUTATED | 16 | 8 | 3 |
SDK1 WILD-TYPE | 37 | 119 | 35 |
P value = 2.85e-05 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 58 | 44 | 68 | 37 |
TMEM132D MUTATED | 1 | 11 | 1 | 3 |
TMEM132D WILD-TYPE | 57 | 33 | 67 | 34 |
P value = 9.57e-05 (Fisher's exact test), Q value = 0.17
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 78 | 47 | 60 | 33 |
LRRN3 MUTATED | 0 | 8 | 2 | 0 |
LRRN3 WILD-TYPE | 78 | 39 | 58 | 33 |
P value = 7.22e-05 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
GUCY1A3 MUTATED | 9 | 1 | 2 |
GUCY1A3 WILD-TYPE | 44 | 126 | 36 |
P value = 2.77e-06 (Fisher's exact test), Q value = 0.005
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
OR51V1 MUTATED | 9 | 0 | 0 |
OR51V1 WILD-TYPE | 44 | 127 | 38 |
P value = 8.41e-05 (Fisher's exact test), Q value = 0.15
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 86 | 83 | 36 | 16 |
ZC3H13 MUTATED | 2 | 18 | 1 | 0 |
ZC3H13 WILD-TYPE | 84 | 65 | 35 | 16 |
P value = 6.7e-05 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
ZC3H13 MUTATED | 13 | 4 | 4 |
ZC3H13 WILD-TYPE | 40 | 123 | 34 |
P value = 0.000129 (Fisher's exact test), Q value = 0.23
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
CSMD3 MUTATED | 16 | 8 | 4 |
CSMD3 WILD-TYPE | 37 | 119 | 34 |
P value = 0.000116 (Fisher's exact test), Q value = 0.21
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
DCAF4L2 MUTATED | 9 | 1 | 1 |
DCAF4L2 WILD-TYPE | 44 | 126 | 37 |
P value = 0.000122 (Fisher's exact test), Q value = 0.22
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 58 | 44 | 68 | 37 |
DOCK2 MUTATED | 1 | 8 | 1 | 7 |
DOCK2 WILD-TYPE | 57 | 36 | 67 | 30 |
P value = 0.000138 (Fisher's exact test), Q value = 0.25
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 86 | 83 | 36 | 16 |
DOCK2 MUTATED | 1 | 17 | 2 | 1 |
DOCK2 WILD-TYPE | 85 | 66 | 34 | 15 |
P value = 1.35e-05 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 78 | 47 | 60 | 33 |
DOCK2 MUTATED | 0 | 8 | 12 | 1 |
DOCK2 WILD-TYPE | 78 | 39 | 48 | 32 |
P value = 7.91e-07 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
DOCK2 MUTATED | 14 | 2 | 5 |
DOCK2 WILD-TYPE | 39 | 125 | 33 |
P value = 0.000103 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
RIMS1 MUTATED | 11 | 3 | 1 |
RIMS1 WILD-TYPE | 42 | 124 | 37 |
P value = 4.46e-05 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 58 | 44 | 68 | 37 |
CDH10 MUTATED | 0 | 4 | 1 | 8 |
CDH10 WILD-TYPE | 58 | 40 | 67 | 29 |
P value = 0.000131 (Fisher's exact test), Q value = 0.23
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 86 | 83 | 36 | 16 |
CDH10 MUTATED | 0 | 13 | 1 | 0 |
CDH10 WILD-TYPE | 86 | 70 | 35 | 16 |
P value = 2.68e-05 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 53 | 127 | 38 |
CDH10 MUTATED | 11 | 2 | 1 |
CDH10 WILD-TYPE | 42 | 125 | 37 |
P value = 2.86e-05 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 58 | 44 | 68 | 37 |
SYNE1 MUTATED | 8 | 14 | 6 | 17 |
SYNE1 WILD-TYPE | 50 | 30 | 62 | 20 |
P value = 2.56e-05 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 59 | 106 |
SYNE1 MUTATED | 3 | 25 | 17 |
SYNE1 WILD-TYPE | 39 | 34 | 89 |
P value = 1.63e-06 (Fisher's exact test), Q value = 0.0029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 86 | 83 | 36 | 16 |
SYNE1 MUTATED | 7 | 32 | 6 | 0 |
SYNE1 WILD-TYPE | 79 | 51 | 30 | 16 |
-
Mutation data file = COADREAD-TP.mutsig.cluster.txt
-
Molecular subtypes file = COADREAD-TP.transferedmergedcluster.txt
-
Number of patients = 224
-
Number of significantly mutated genes = 209
-
Number of Molecular subtypes = 10
-
Exclude genes that fewer than K tumors have mutations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
This is an experimental feature. The full results of the analysis summarized in this report can be downloaded from the TCGA Data Coordination Center.