Clinical Features Time to Death AGE GENDER PATHOLOGY.T PATHOLOGY.N TUMOR.STAGE RADIATIONS.RADIATION.REGIMENINDICATION NUMBERPACKYEARSSMOKED STOPPEDSMOKINGYEAR TOBACCOSMOKINGHISTORYINDICATOR YEAROFTOBACCOSMOKINGONSET nMutated (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q NOTCH1 57 (19%) 249 0.59513 1 0.12886 1 0.3233 1 0.75275 1 0.86569 1 0.94759 1 0.50059 1 0.0087165 1 0.45916 1 0.5877 1 0.81324 1 CDKN2A 65 (21%) 241 0.45948 1 0.69667 1 0.63989 1 0.6643 1 0.97978 1 0.26352 1 0.10787 1 0.070868 1 0.25861 1 0.1829 1 0.39371 1 HRAS 10 (3%) 296 0.079092 1 0.22718 1 1 1 0.24136 1 0.053819 1 0.088509 1 0.46135 1 0.15665 1 0.92409 1 0.15689 1 0.21651 1 NFE2L2 17 (6%) 289 0.037997 1 0.006976 1 0.57581 1 0.772 1 0.88426 1 0.50247 1 0.25552 1 0.90557 1 0.63563 1 0.42575 1 0.30925 1 PIK3CA 64 (21%) 242 0.27151 1 0.83191 1 0.2071 1 0.74154 1 0.47745 1 0.39285 1 1 1 0.71508 1 0.35386 1 0.69915 1 0.89774 1 TP53 214 (70%) 92 1.5908e-05 0.0155 0.76941 1 0.57805 1 0.0057709 1 0.017471 1 0.0067002 1 0.15224 1 0.10901 1 0.4237 1 0.38659 1 0.78309 1 CASP8 27 (9%) 279 0.54927 1 0.00030258 0.295 0.0012748 1 0.55929 1 0.10271 1 0.16834 1 0.4912 1 0.22274 1 0.078913 1 0.011375 1 0.13112 1 FAT1 72 (24%) 234 0.7937 1 0.00051048 0.496 0.13132 1 0.5369 1 0.76007 1 0.49866 1 0.87747 1 0.53024 1 0.11994 1 0.024479 1 0.13281 1 JUB 18 (6%) 288 0.094292 1 0.080219 1 1 1 0.45514 1 0.2817 1 0.6399 1 0.78481 1 0.53793 1 0.71468 1 0.18554 1 0.06555 1 MLL2 56 (18%) 250 0.92789 1 0.99327 1 0.86888 1 0.24243 1 0.88147 1 0.40486 1 1 1 0.31551 1 0.048115 1 0.16523 1 0.39345 1 FBXW7 15 (5%) 291 0.89755 1 0.095829 1 0.37184 1 0.63464 1 0.30953 1 0.66822 1 0.54363 1 0.41524 1 0.334 1 0.38632 1 0.37256 1 NSD1 33 (11%) 273 0.19403 1 0.081895 1 0.30097 1 0.77834 1 0.00056152 0.545 0.036194 1 0.3993 1 0.21826 1 0.8425 1 0.29684 1 0.94651 1 BAGE2 11 (4%) 295 0.058947 1 0.25996 1 0.73325 1 0.67784 1 0.80709 1 0.60937 1 0.73548 1 0.96567 1 0.36892 1 0.64547 1 0.72795 1 POTEC 15 (5%) 291 0.22889 1 0.049128 1 0.13292 1 0.2122 1 0.9255 1 0.63591 1 0.54363 1 0.23211 1 3.4601e-05 0.0338 0.0081927 1 0.8718 1 ZNF750 13 (4%) 293 0.57101 1 0.84527 1 0.12301 1 0.059409 1 0.74528 1 0.6698 1 0.52722 1 0.90015 1 0.7266 1 0.43086 1 0.16156 1 EP300 25 (8%) 281 0.64244 1 0.53598 1 0.64122 1 0.95093 1 0.58649 1 0.54883 1 0.63578 1 0.11317 1 0.17022 1 0.37399 1 0.72971 1 POM121L12 14 (5%) 292 0.64875 1 0.91238 1 1 1 0.07357 1 0.34277 1 0.44409 1 0.7588 1 0.42692 1 0.88481 1 0.24458 1 0.77272 1 RHOA 4 (1%) 302 0.2882 1 0.91598 1 0.30318 1 0.22387 1 0.18218 1 0.60019 1 0.57549 1 0.0018613 1 NA NA 0.16894 1 0.54669 1 B2M 7 (2%) 299 0.2326 1 0.48302 1 1 1 0.60968 1 NA NA 0.78979 1 0.68284 1 NA NA NA NA 0.010966 1 NA NA RAC1 9 (3%) 297 0.67617 1 0.0068215 1 0.067629 1 0.41172 1 0.21456 1 0.29721 1 1 1 0.72145 1 0.30294 1 0.27885 1 0.0048066 1 ZNF804B 21 (7%) 285 0.35618 1 0.053971 1 0.8046 1 0.95195 1 0.74301 1 0.66188 1 0.11728 1 0.026572 1 0.022143 1 0.33625 1 0.87306 1 KCNT2 17 (6%) 289 0.40949 1 0.6631 1 0.78689 1 0.23788 1 0.81747 1 0.81566 1 0.25552 1 0.17024 1 0.15307 1 0.080359 1 0.10732 1 RASA1 14 (5%) 292 0.4657 1 0.78313 1 0.36448 1 0.52145 1 0.89477 1 0.84348 1 0.20423 1 0.96823 1 0.84681 1 0.85501 1 0.43746 1 PRIM2 9 (3%) 297 0.65172 1 0.51617 1 1 1 0.46147 1 0.22928 1 0.3418 1 0.45661 1 0.11612 1 0.36892 1 0.0677 1 0.90652 1 CDH10 23 (8%) 283 0.17054 1 0.036212 1 0.33573 1 0.11313 1 0.79725 1 0.070148 1 0.21412 1 0.098 1 0.072206 1 0.8282 1 0.15329 1 CNTNAP5 15 (5%) 291 0.17279 1 0.58857 1 0.076936 1 0.029148 1 0.37884 1 0.049217 1 0.76768 1 0.13881 1 0.012765 1 0.17256 1 0.23422 1 POTEG 10 (3%) 296 0.43195 1 0.078876 1 1 1 0.47743 1 0.89025 1 0.095884 1 0.71902 1 0.31002 1 NA NA 0.4463 1 0.018662 1 ZNF99 22 (7%) 284 0.28399 1 0.87562 1 0.1449 1 0.12364 1 0.71709 1 0.43251 1 0.80344 1 0.32683 1 0.00070825 0.686 0.19647 1 0.62347 1 OR2T12 11 (4%) 295 0.8757 1 0.051615 1 1 1 0.03252 1 0.13366 1 0.005287 1 0.30069 1 0.037937 1 0.11193 1 0.059833 1 0.20051 1 REG1A 8 (3%) 298 0.45823 1 0.57281 1 1 1 0.63616 1 1 1 1 1 0.42481 1 0.1364 1 0.059994 1 0.23554 1 0.58051 1 PABPC5 9 (3%) 297 0.72314 1 0.71745 1 1 1 0.2138 1 0.68586 1 0.19873 1 0.69792 1 0.2936 1 NA NA 0.31986 1 0.17439 1 IL32 4 (1%) 302 0.12658 1 0.93188 1 0.30318 1 0.87804 1 0.087478 1 0.46382 1 0.57549 1 NA NA NA NA 0.65103 1 NA NA PRAMEF11 10 (3%) 296 0.28885 1 0.040221 1 0.14455 1 0.71046 1 0.68586 1 1 1 0.71902 1 0.11007 1 0.67818 1 0.87205 1 0.097552 1 EPHA2 14 (5%) 292 0.019484 1 0.89069 1 0.22052 1 0.93162 1 0.18379 1 0.8051 1 1 1 0.0074732 1 0.52303 1 0.34896 1 0.079307 1 FCRL4 13 (4%) 293 0.36788 1 0.22332 1 0.52597 1 0.25448 1 0.55539 1 0.48064 1 1 1 0.10911 1 0.15057 1 0.71145 1 0.088287 1 LCP1 12 (4%) 294 0.65365 1 0.84675 1 0.52226 1 0.03085 1 1 1 0.03944 1 0.50959 1 0.91474 1 0.22189 1 0.45658 1 0.70001 1 LRFN5 13 (4%) 293 0.89295 1 0.86182 1 1 1 0.62747 1 0.037716 1 0.87805 1 1 1 0.71858 1 0.43672 1 0.065493 1 0.45717 1 MAPK1 4 (1%) 302 0.45169 1 0.29173 1 1 1 0.51374 1 0.68235 1 0.71209 1 0.57549 1 NA NA NA NA 0.88476 1 NA NA PEG3 23 (8%) 283 0.56284 1 0.98263 1 0.46674 1 0.9562 1 0.64241 1 0.71795 1 0.32062 1 0.13989 1 0.0248 1 0.075951 1 0.80128 1 PRSS1 8 (3%) 298 0.2874 1 0.75115 1 0.00060345 0.585 0.86887 1 0.12454 1 1 1 0.20984 1 NA NA 0.11 1 0.048687 1 0.66978 1 DOK6 8 (3%) 298 0.69529 1 0.34775 1 0.006339 1 0.83518 1 0.12454 1 0.4967 1 0.68461 1 0.074408 1 NA NA 0.021854 1 0.82189 1 GABRB3 11 (4%) 295 0.12837 1 0.62086 1 0.038938 1 0.28352 1 0.089034 1 0.24725 1 0.73548 1 0.23771 1 0.68088 1 0.97295 1 0.00026578 0.259 STEAP4 10 (3%) 296 0.63372 1 0.98136 1 0.29502 1 0.12984 1 1 1 0.39214 1 1 1 0.038047 1 0.083972 1 0.80771 1 0.36319 1 ASXL3 21 (7%) 285 0.49393 1 0.57176 1 0.45558 1 0.72694 1 0.45947 1 0.47341 1 0.3026 1 0.66925 1 0.62525 1 0.28851 1 0.60934 1 NTM 7 (2%) 299 0.84717 1 0.86954 1 1 1 0.55966 1 1 1 0.097959 1 0.19733 1 0.82294 1 0.62797 1 0.17257 1 0.72136 1 FAM155A 11 (4%) 295 0.66714 1 0.4968 1 0.3002 1 0.50219 1 0.26922 1 0.20226 1 0.48023 1 0.45509 1 0.067628 1 0.19757 1 0.45374 1 HLA-A 9 (3%) 297 0.49821 1 0.26211 1 1 1 0.62005 1 0.33646 1 0.27403 1 0.23986 1 0.7093 1 0.1718 1 0.0055426 1 0.27298 1 KRTAP1-5 3 (1%) 303 0.25778 1 0.52788 1 0.56424 1 NA NA NA NA NA NA 0.57314 1 NA NA NA NA 0.47493 1 NA NA CTCF 11 (4%) 295 0.23939 1 0.044362 1 0.1811 1 0.93475 1 0.60641 1 0.53279 1 1 1 0.15042 1 0.8532 1 0.031862 1 0.19171 1 BRWD3 16 (5%) 290 0.22189 1 0.68295 1 0.00048595 0.472 0.73105 1 0.38641 1 0.93046 1 0.76901 1 0.83812 1 0.58699 1 0.90038 1 0.98873 1 CNPY3 3 (1%) 303 NA NA 0.080726 1 0.56424 1 0.84023 1 0.77343 1 1 1 1 1 NA NA NA NA NA NA NA NA FAM101A 4 (1%) 302 0.80601 1 0.93659 1 1 1 0.60968 1 1 1 0.78979 1 1 1 NA NA NA NA 0.33033 1 NA NA HLA-B 9 (3%) 297 0.63605 1 0.70123 1 0.067629 1 0.91305 1 0.025704 1 0.31114 1 0.11813 1 0.82768 1 0.50422 1 0.092197 1 0.082867 1 PSG8 9 (3%) 297 0.98297 1 0.074034 1 0.12083 1 0.95609 1 0.25138 1 0.38226 1 1 1 0.022266 1 0.44952 1 0.92802 1 0.90858 1 OR56A1 8 (3%) 298 0.86577 1 0.88242 1 0.68858 1 0.12984 1 0.89025 1 0.39214 1 1 1 0.27073 1 0.64693 1 0.27382 1 0.91712 1 OR2M2 8 (3%) 298 0.63349 1 0.38393 1 1 1 0.52116 1 0.38938 1 0.55373 1 1 1 0.047927 1 1.1946e-07 0.000117 0.38862 1 0.80147 1 OR4M2 8 (3%) 298 0.37541 1 0.60836 1 0.68858 1 0.43755 1 1 1 0.73777 1 0.68461 1 0.38326 1 NA NA 0.74067 1 0.97904 1 CPXCR1 7 (2%) 299 0.53451 1 0.48094 1 1 1 0.72492 1 0.80709 1 0.67092 1 0.072842 1 NA NA NA NA 0.2764 1 NA NA EYA1 10 (3%) 296 0.8107 1 0.21524 1 0.14455 1 0.10703 1 0.40776 1 0.92737 1 0.71902 1 0.1488 1 0.98217 1 0.96986 1 0.43204 1 LINGO2 10 (3%) 296 0.41214 1 0.30784 1 0.29502 1 0.26294 1 1 1 0.55373 1 0.13062 1 0.79296 1 0.9815 1 0.62981 1 0.72876 1 SEMA5A 19 (6%) 287 0.63633 1 0.3863 1 0.60636 1 0.93162 1 0.24768 1 0.73729 1 1 1 0.037021 1 0.0081326 1 0.031832 1 0.55863 1 TGFBR2 10 (3%) 296 0.6681 1 0.029202 1 1 1 0.71046 1 0.33646 1 0.83326 1 0.069956 1 0.28736 1 0.32895 1 0.33141 1 0.0083921 1 PLSCR1 5 (2%) 301 0.066892 1 0.39542 1 1 1 0.83411 1 0.36168 1 0.76484 1 1 1 NA NA NA NA 0.81654 1 0.30376 1 LIN28B 6 (2%) 300 0.46553 1 0.92849 1 0.35132 1 1 1 NA NA 0.42708 1 0.64695 1 0.5853 1 NA NA 0.67135 1 0.63507 1 AGTR1 8 (3%) 298 0.32363 1 0.022443 1 0.45323 1 0.89767 1 0.40776 1 0.67092 1 0.68461 1 0.086622 1 0.019907 1 0.38862 1 0.032914 1 C6 12 (4%) 294 0.72749 1 0.51617 1 0.3212 1 0.84816 1 1 1 0.81706 1 0.50959 1 0.17241 1 0.29859 1 0.87657 1 0.20964 1 MS4A14 9 (3%) 297 0.9982 1 0.40671 1 0.067629 1 0.38217 1 0.4981 1 0.36424 1 0.45661 1 0.79526 1 0.79319 1 0.62409 1 0.81496 1 HIST1H4E 5 (2%) 301 0.85073 1 0.54852 1 0.6176 1 0.87804 1 1 1 0.46382 1 0.33407 1 NA NA NA NA 0.72476 1 NA NA LBP 7 (2%) 299 0.97961 1 0.43591 1 0.67818 1 0.84023 1 0.25469 1 1 1 1 1 0.78999 1 NA NA 0.15245 1 0.82806 1 RGS17 5 (2%) 301 0.52894 1 0.48327 1 0.6176 1 0.84023 1 NA NA 0.78979 1 0.33407 1 0.94589 1 NA NA 0.64411 1 NA NA LILRB1 12 (4%) 294 0.88488 1 0.90656 1 0.52226 1 0.29216 1 0.52023 1 0.63761 1 1 1 0.1181 1 0.86893 1 0.60239 1 0.57015 1 MAGEL2 12 (4%) 294 0.47723 1 0.34204 1 1 1 0.24001 1 0.099651 1 0.053349 1 0.30783 1 0.41747 1 0.48645 1 0.22522 1 0.55446 1 OR8D4 6 (2%) 300 0.2235 1 0.1317 1 0.19339 1 0.76249 1 0.42809 1 0.19965 1 1 1 0.80356 1 0.07643 1 0.23683 1 0.26317 1 HIST1H1B 7 (2%) 299 0.20436 1 0.085667 1 0.39772 1 0.89767 1 0.14998 1 0.90813 1 0.68284 1 NA NA NA NA 0.055408 1 NA NA C3ORF59 8 (3%) 298 0.88689 1 0.83106 1 0.68858 1 0.55418 1 0.12181 1 0.72263 1 1 1 0.37904 1 0.83211 1 0.53719 1 0.42896 1 C8ORF34 7 (2%) 299 0.22333 1 0.40376 1 0.67818 1 0.8529 1 0.88731 1 0.39214 1 0.37667 1 0.32836 1 0.28902 1 0.44332 1 0.039568 1 OR8J1 9 (3%) 297 0.70628 1 0.32049 1 0.45271 1 1 1 0.68586 1 0.92737 1 0.23986 1 0.016566 1 0.00042848 0.417 0.37354 1 0.42564 1 RAB32 3 (1%) 303 0.96967 1 0.35198 1 0.56424 1 1 1 NA NA NA NA 0.16088 1 NA NA NA NA 0.30108 1 0.38119 1 TMEM195 8 (3%) 298 0.66861 1 0.032296 1 1 1 0.8529 1 1 1 0.62099 1 1 1 0.4958 1 0.041162 1 0.20373 1 0.28009 1 PCDH11X 21 (7%) 285 0.72353 1 0.71593 1 0.0037901 1 0.13447 1 0.79725 1 0.97064 1 0.033953 1 0.12478 1 0.39878 1 0.40269 1 0.5307 1 SLITRK4 12 (4%) 294 0.11464 1 0.04172 1 0.52226 1 0.76685 1 0.37848 1 0.95051 1 0.50959 1 0.21094 1 0.64532 1 0.85942 1 0.56448 1 FRG2B 6 (2%) 300 0.89916 1 0.37759 1 0.050299 1 0.76249 1 0.88731 1 0.55373 1 1 1 0.35732 1 NA NA 0.22796 1 0.24911 1 OR2L13 7 (2%) 299 0.38213 1 0.39172 1 1 1 0.13696 1 0.32764 1 0.21598 1 0.68284 1 0.65214 1 NA NA 0.55377 1 0.34123 1 CUL3 10 (3%) 296 0.76958 1 0.46673 1 0.73291 1 0.087536 1 0.55412 1 0.28922 1 0.13062 1 0.52693 1 0.2512 1 0.19546 1 0.19742 1 FOSL2 7 (2%) 299 0.0066202 1 0.76128 1 0.39772 1 0.70561 1 0.68235 1 0.87654 1 1 1 0.41224 1 0.81267 1 0.91107 1 0.98581 1 GPR158 12 (4%) 294 0.76365 1 0.77945 1 0.3212 1 0.45281 1 0.25654 1 0.13693 1 0.73697 1 0.70631 1 NA NA 0.33288 1 0.35918 1 PTPRT 19 (6%) 287 0.79834 1 0.50872 1 0.60636 1 0.13362 1 0.2944 1 0.25147 1 0.27708 1 0.47092 1 0.12458 1 0.60382 1 0.67057 1 POTEH 7 (2%) 299 0.50198 1 0.077457 1 0.67818 1 0.46384 1 0.033032 1 0.87654 1 1 1 0.80964 1 NA NA 0.27091 1 0.14129 1 OR5D13 7 (2%) 299 0.28517 1 0.20899 1 0.018318 1 0.65056 1 1 1 0.87654 1 1 1 0.30628 1 0.035341 1 0.57494 1 0.37461 1 PRB1 7 (2%) 299 0.55825 1 0.52816 1 0.19597 1 0.61772 1 0.40776 1 0.53083 1 0.37667 1 0.2603 1 0.014782 1 0.36593 1 0.86774 1 NEUROD6 7 (2%) 299 0.68495 1 0.3258 1 1 1 0.63616 1 1 1 1 1 0.072842 1 0.39423 1 0.89462 1 0.91107 1 0.81016 1 DPP10 16 (5%) 290 0.45306 1 0.11091 1 0.77495 1 0.97301 1 0.76127 1 0.56883 1 0.76901 1 0.88576 1 0.99046 1 0.79779 1 0.052786 1 DPPA4 7 (2%) 299 0.5288 1 0.69172 1 1 1 1 1 0.13823 1 0.73777 1 0.37667 1 0.8489 1 0.91659 1 0.91107 1 0.66111 1 EPDR1 6 (2%) 300 0.94564 1 0.80465 1 0.66766 1 0.58691 1 0.2335 1 0.81024 1 0.64695 1 0.89844 1 NA NA 0.31992 1 0.16645 1