Clinical Features	Time to Death		AGE		PRIMARY.SITE.OF.DISEASE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		HISTOLOGICAL.TYPE		PATHOLOGY.T		PATHOLOGY.N		PATHOLOGICSPREAD(M)		TUMOR.STAGE		RADIATIONS.RADIATION.REGIMENINDICATION		NUMBERPACKYEARSSMOKED		STOPPEDSMOKINGYEAR		TOBACCOSMOKINGHISTORYINDICATOR		YEAROFTOBACCOSMOKINGONSET		DISTANT.METASTASIS		LYMPH.NODE.METASTASIS		COMPLETENESS.OF.RESECTION		NUMBER.OF.LYMPH.NODES		TUMOR.STAGECODE		NEOPLASM.DISEASESTAGE	
Statistical Tests	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	Chi-square test_P	Chi-square test_Q	Chi-square test_P	Chi-square test_Q	Chi-square test_P	Chi-square test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	Chi-square test_P	Chi-square test_Q	Chi-square test_P	Chi-square test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q
1p gain	0.21191	1	0.011191	1	1.4976e-28	2.24e-25	8.6043e-07	0.00116	0.45726	1	1.45e-29	2.17e-26	0.00016105	0.205	0.051861	1	0.2533	1	0.31238	1	0.56795	1	0.6737	1	0.72603	1	0.38862	1	0.66949	1	0.93465	1	0.91535	1	0.016134	1	0.5451	1	NA	NA	0.31481	1
1q gain	2.0379e-10	2.88e-07	0.84052	1	3.0859e-135	4.86e-132	1.8922e-33	2.85e-30	0.69199	1	2.1926e-39	3.33e-36	1.6502e-05	0.0217	0.32875	1	0.000871	1	0.32882	1	0.96494	1	0.15145	1	0.30441	1	0.21883	1	0.71013	1	0.53288	1	0.36957	1	0.32827	1	0.22922	1	NA	NA	0.0002655	0.335
2p gain	0.86837	1	0.00011322	0.145	1.2509e-30	1.88e-27	0.66341	1	0.011011	1	1.7975e-13	2.57e-10	0.03164	1	0.032848	1	0.84478	1	0.0002085	0.264	6.7019e-06	0.0089	0.59568	1	0.014451	1	0.0054382	1	0.28506	1	0.57592	1	0.3854	1	0.86838	1	0.62158	1	NA	NA	2.4667e-05	0.0322
2q gain	0.87673	1	0.00085803	1	1.1736e-21	1.73e-18	0.47868	1	0.78508	1	1.0042e-08	1.4e-05	0.18565	1	0.1006	1	0.62673	1	0.0061842	1	0.0016326	1	0.61967	1	0.11913	1	0.075413	1	0.29704	1	0.50052	1	0.18398	1	0.81995	1	0.38246	1	NA	NA	0.013578	1
3p gain	0.48901	1	0.084143	1	2.7079e-30	4.06e-27	0.079798	1	0.018174	1	6.1677e-19	9e-16	0.070989	1	0.33581	1	0.10398	1	7.8761e-05	0.101	0.04716	1	0.81666	1	0.081128	1	0.0040472	1	0.15284	1	0.50422	1	0.063967	1	0.018159	1	0.5867	1	NA	NA	4.6508e-05	0.0604
3q gain	0.15209	1	0.0004379	0.55	2.2028e-87	3.45e-84	0.83677	1	1.5277e-05	0.0201	1.2533e-88	1.97e-85	6.9603e-07	0.000944	9.1472e-06	0.0121	0.15512	1	1.3357e-06	0.00179	0.00012982	0.166	0.24193	1	0.063104	1	0.81763	1	0.89701	1	0.40693	1	0.023273	1	0.063087	1	0.19358	1	NA	NA	0.00065777	0.82
4p gain	0.24359	1	0.28216	1	1.0072e-06	0.00136	0.49267	1	0.037707	1	1.3114e-06	0.00176	0.20441	1	0.92398	1	0.64746	1	0.27689	1	0.39095	1	0.97116	1	0.7923	1	0.50845	1	0.4468	1	0.2579	1	0.84431	1	0.38801	1	0.077825	1	NA	NA	0.005785	1
4q gain	0.52457	1	0.36376	1	0.034069	1	0.91701	1	0.47619	1	0.005268	1	0.4923	1	0.96156	1	0.92971	1	0.27457	1	0.79516	1	0.74788	1	0.81146	1	0.2661	1	0.8972	1	0.37808	1	0.82344	1	0.2959	1	0.28122	1	NA	NA	0.010631	1
5p gain	0.31673	1	3.715e-05	0.0484	7.9198e-83	1.24e-79	0.00046715	0.585	0.0064899	1	1.2806e-52	1.97e-49	8.4614e-10	1.19e-06	0.57688	1	0.1907	1	0.017122	1	1.4075e-08	1.95e-05	0.5105	1	0.070646	1	0.015677	1	0.71366	1	0.73225	1	0.094181	1	0.2838	1	0.72568	1	NA	NA	0.53424	1
5q gain	0.0025659	1	0.0014698	1	9.0453e-58	1.4e-54	0.00030059	0.379	0.41394	1	4.5651e-43	6.96e-40	0.0057474	1	0.019986	1	0.060894	1	0.0025715	1	0.0074307	1	0.86308	1	0.58547	1	0.76445	1	0.1188	1	0.21381	1	0.64047	1	0.36794	1	0.32184	1	NA	NA	0.93793	1
6p gain	0.0036499	1	0.24887	1	1.0807e-35	1.63e-32	3.4064e-07	0.000465	0.44412	1	4.4837e-22	6.6e-19	0.11356	1	0.026087	1	0.0024682	1	6.6272e-07	0.000899	0.0016073	1	0.78257	1	0.32078	1	0.75976	1	0.35614	1	0.70595	1	0.91659	1	0.091356	1	0.41792	1	NA	NA	0.66054	1
6q gain	0.049055	1	0.077551	1	1.3065e-18	1.9e-15	0.0007414	0.919	0.74424	1	2.4062e-13	3.44e-10	6.6758e-05	0.0861	0.12939	1	0.11098	1	1.8538e-05	0.0243	0.0097212	1	0.33797	1	0.79324	1	0.2603	1	0.24864	1	0.45922	1	0.60092	1	0.0097803	1	0.6482	1	NA	NA	0.69745	1
7p gain	0	0	0.015944	1	1.138e-166	1.8e-163	6.3932e-27	9.51e-24	0.14755	1	1.0093e-51	1.55e-48	1.4921e-09	2.09e-06	0.0045711	1	7.4108e-05	0.0954	0.20427	1	6.5599e-14	9.4e-11	0.75029	1	0.56735	1	0.92038	1	0.33444	1	0.53889	1	0.26179	1	0.0061054	1	0.072376	1	NA	NA	0.44005	1
7q gain	0	0	0.10575	1	1.2615e-182	2e-179	8.9779e-27	1.33e-23	0.0433	1	1.0286e-38	1.56e-35	1.0785e-08	1.5e-05	0.13386	1	9.3162e-07	0.00126	0.082435	1	3.7887e-17	5.51e-14	0.37202	1	0.26749	1	0.61841	1	0.69152	1	0.090925	1	0.16366	1	0.0082567	1	0.39386	1	NA	NA	0.26457	1
8p gain	0.0035564	1	0.59296	1	4.1761e-25	6.19e-22	0.0014863	1	0.060981	1	7.8137e-08	0.000108	2.2785e-06	0.00304	0.041309	1	0.73676	1	0.0078206	1	0.15074	1	0.74124	1	0.0039062	1	0.0057797	1	0.0413	1	0.48545	1	0.78066	1	0.072963	1	0.59096	1	NA	NA	0.41693	1
8q gain	0.00019166	0.244	0.57597	1	5.2505e-86	8.22e-83	9.0743e-05	0.116	0.0084788	1	8.1572e-35	1.23e-31	1.0789e-14	1.55e-11	1.3422e-07	0.000184	0.0081108	1	1.977e-09	2.77e-06	7.2214e-06	0.00958	0.56729	1	0.013673	1	0.052374	1	0.16727	1	0.24928	1	0.1238	1	0.094618	1	0.30055	1	NA	NA	0.13833	1
9p gain	0.0084027	1	0.73664	1	8.1974e-26	1.22e-22	0.12728	1	0.38179	1	8.4007e-17	1.22e-13	3.0838e-05	0.0402	0.61806	1	0.19892	1	0.0017175	1	0.001532	1	0.58365	1	0.66753	1	0.49108	1	0.74329	1	0.89017	1	0.18973	1	0.47876	1	0.28298	1	NA	NA	0.10802	1
9q gain	0.69033	1	0.71289	1	1.2131e-23	1.79e-20	0.015734	1	0.98428	1	1.3218e-21	1.94e-18	1.9426e-07	0.000267	0.60347	1	0.058112	1	3.5145e-07	0.00048	0.8113	1	0.75561	1	0.30385	1	0.31879	1	0.74197	1	0.48678	1	0.21192	1	0.28551	1	0.57628	1	NA	NA	0.067354	1
10p gain	0.028286	1	0.92244	1	1.1699e-58	1.81e-55	2.1852e-20	3.2e-17	0.91541	1	1.6987e-37	2.58e-34	0.065707	1	0.21301	1	0.0099233	1	3.1631e-13	4.51e-10	0.12336	1	0.4613	1	0.57695	1	7.1284e-05	0.0918	0.4085	1	0.40374	1	0.48327	1	0.0013245	1	0.1198	1	NA	NA	0.0075138	1
10q gain	0.017596	1	0.84651	1	1.8186e-46	2.78e-43	3.736e-16	5.41e-13	0.31615	1	3.634e-28	5.42e-25	0.92424	1	0.085551	1	0.39372	1	8.1609e-07	0.00111	0.7996	1	0.30123	1	0.83802	1	0.70249	1	0.8379	1	0.95982	1	0.95691	1	0.0073481	1	0.12913	1	NA	NA	0.017241	1
11p gain	0.086032	1	0.22456	1	4.9384e-15	7.12e-12	0.73323	1	0.34633	1	5.5401e-06	0.00737	0.025813	1	0.22197	1	0.16548	1	0.26099	1	0.016382	1	0.25318	1	0.032535	1	0.73298	1	0.75652	1	0.86533	1	0.71994	1	0.67341	1	0.30444	1	NA	NA	0.016444	1
11q gain	0.73194	1	0.0029681	1	2.5039e-16	3.63e-13	0.79285	1	0.82222	1	5.7955e-09	8.1e-06	0.00062184	0.776	0.35746	1	0.22753	1	0.033122	1	0.00070547	0.876	0.27139	1	8.2596e-05	0.106	0.14383	1	0.24949	1	0.73077	1	0.21446	1	0.42204	1	0.76671	1	NA	NA	0.04727	1
12p gain	0.8122	1	0.0014918	1	1.4492e-43	2.21e-40	0.3665	1	0.050518	1	4.5924e-25	6.8e-22	0.00033968	0.428	0.69704	1	0.9177	1	9.6841e-09	1.35e-05	4.2154e-07	0.000575	0.37765	1	0.11179	1	0.21289	1	0.56541	1	0.87552	1	0.77835	1	0.49816	1	0.93015	1	NA	NA	0.92095	1
12q gain	0.92896	1	0.0020929	1	7.0954e-15	1.02e-11	0.2692	1	0.25812	1	6.4865e-05	0.0837	0.030633	1	0.68846	1	0.45016	1	0.00034651	0.436	0.00022731	0.288	0.38039	1	0.65644	1	0.92863	1	0.44958	1	0.068146	1	0.94755	1	0.32869	1	0.02513	1	NA	NA	0.98348	1
13q gain	0.0039388	1	6.4787e-11	9.17e-08	3.0327e-280	4.83e-277	3.0553e-05	0.0399	0.11603	1	2.3197e-211	3.69e-208	1.204e-34	1.81e-31	1.6798e-06	0.00225	1.3593e-05	0.0179	7.9091e-08	0.000109	9.566e-15	1.38e-11	0.94493	1	0.77036	1	5.1825e-07	0.000705	0.12908	1	0.4297	1	0.23889	1	2.9477e-05	0.0385	0.86939	1	NA	NA	0.035186	1
14q gain	0.029932	1	0.39983	1	7.713e-29	1.15e-25	0.16915	1	0.068722	1	4.7869e-21	7.03e-18	0.0030052	1	0.56371	1	0.0050797	1	0.55168	1	0.018521	1	0.055373	1	0.067341	1	0.1843	1	0.28265	1	0.96849	1	0.61368	1	0.23948	1	0.057136	1	NA	NA	0.14025	1
15q gain	0.11603	1	0.98013	1	4.8185e-08	6.65e-05	1	1	0.21264	1	5.104e-07	0.000695	0.00017999	0.229	0.50342	1	0.47827	1	0.3213	1	0.056005	1	0.23893	1	0.68573	1	0.69641	1	0.30214	1	0.34913	1	0.59986	1	0.45909	1	0.30637	1	NA	NA	0.88303	1
16p gain	2.0112e-09	2.82e-06	0.41221	1	1.308e-70	2.04e-67	1.277e-06	0.00172	0.093261	1	4.7384e-17	6.88e-14	0.029599	1	0.36633	1	0.66866	1	0.58147	1	0.010371	1	0.4968	1	0.44652	1	0.35957	1	0.36778	1	0.063299	1	0.18155	1	0.14765	1	0.10379	1	NA	NA	0.0038971	1
16q gain	0.067691	1	0.84757	1	2.5413e-28	3.79e-25	0.0026335	1	0.68462	1	1.0596e-21	1.56e-18	0.0099839	1	0.062636	1	0.69279	1	0.42846	1	4.1013e-06	0.00546	0.47682	1	0.81846	1	0.22094	1	0.32885	1	0.084109	1	0.55091	1	0.45789	1	0.9649	1	NA	NA	0.00073883	0.917
17p gain	0.093648	1	0.29978	1	1.4964e-06	0.00201	0.040301	1	0.65046	1	9.3341e-07	0.00126	0.95772	1	0.36019	1	0.026677	1	0.59011	1	0.8374	1	0.97014	1	0.26219	1	0.75511	1	0.020295	1	0.85061	1	0.83952	1	0.23985	1	0.88956	1	NA	NA	0.6275	1
17q gain	0.014656	1	0.12909	1	3.2165e-30	4.82e-27	0.075036	1	0.60377	1	1.4613e-19	2.14e-16	0.35724	1	0.075037	1	0.050285	1	0.025185	1	0.17641	1	0.59878	1	0.090886	1	0.16847	1	0.18311	1	0.02547	1	0.24028	1	0.15529	1	0.87292	1	NA	NA	0.52367	1
18p gain	0.1895	1	0.072219	1	9.6773e-18	1.41e-14	0.55923	1	0.028966	1	2.7362e-20	4.01e-17	0.0016841	1	0.00098409	1	0.03679	1	0.0237	1	0.20595	1	0.0098159	1	0.25837	1	0.13939	1	0.79497	1	0.32863	1	0.6822	1	0.96463	1	0.1663	1	NA	NA	0.44526	1
18q gain	0.14239	1	0.48468	1	6.2518e-08	8.62e-05	0.31334	1	0.082105	1	4.2232e-08	5.84e-05	0.00019026	0.242	0.41609	1	0.36539	1	0.22494	1	0.42991	1	0.088755	1	0.092521	1	0.13197	1	0.13539	1	0.25032	1	0.96605	1	0.86445	1	0.95423	1	NA	NA	0.50448	1
19p gain	1.1196e-08	1.56e-05	0.31094	1	5.1483e-56	7.95e-53	0.12903	1	0.46441	1	1.9699e-20	2.89e-17	0.13614	1	0.051887	1	0.10884	1	0.001112	1	3.562e-13	5.08e-10	0.10878	1	0.13541	1	0.022791	1	0.3082	1	0.43725	1	0.91127	1	0.64078	1	0.53824	1	NA	NA	0.81439	1
19q gain	4.0777e-08	5.64e-05	0.097811	1	3.0543e-30	4.58e-27	0.056552	1	0.47808	1	1.1985e-15	1.73e-12	0.092378	1	0.17647	1	0.57248	1	0.032804	1	1.2214e-05	0.0161	0.27891	1	0.042361	1	0.0037003	1	0.23056	1	0.66429	1	0.14053	1	0.51348	1	0.16707	1	NA	NA	0.14926	1
20p gain	4.1339e-05	0.0537	7.6134e-09	1.06e-05	1.8444e-64	2.87e-61	0.022752	1	0.96521	1	2.226e-68	3.47e-65	6.3615e-14	9.12e-11	0.026736	1	9.4078e-06	0.0124	2.7627e-07	0.000378	0.67029	1	0.30387	1	0.37585	1	0.0017565	1	0.080261	1	0.089372	1	0.22183	1	6.9014e-06	0.00916	0.054952	1	NA	NA	0.10984	1
20q gain	0.012128	1	3.3913e-07	0.000464	1.9719e-130	3.1e-127	0.20345	1	0.34388	1	1.0308e-135	1.63e-132	5.5645e-29	8.32e-26	0.00092709	1	0.00020552	0.261	2.8336e-15	4.09e-12	0.014193	1	0.18012	1	0.062678	1	8.0128e-06	0.0106	0.57639	1	0.43492	1	0.33161	1	9.3034e-07	0.00126	0.31261	1	NA	NA	0.06516	1
21q gain	0.45367	1	0.030306	1	1.6614e-15	2.4e-12	0.0011688	1	0.30718	1	4.0196e-10	5.66e-07	0.070357	1	0.22902	1	0.8363	1	0.011197	1	0.77169	1	0.29643	1	0.47129	1	1.6107e-05	0.0212	0.74166	1	0.82727	1	0.024573	1	0.13496	1	0.082418	1	NA	NA	0.011224	1
22q gain	0.54286	1	0.011257	1	4.1985e-36	6.35e-33	2.2646e-09	3.17e-06	0.076688	1	1.2423e-43	1.9e-40	5.5971e-07	0.000761	0.015646	1	0.80698	1	0.014345	1	0.031253	1	0.068306	1	0.0022181	1	0.054099	1	0.026456	1	0.64326	1	0.34499	1	0.31488	1	0.43114	1	NA	NA	0.15476	1
Xq gain	0.022308	1	0.080153	1	2.2227e-08	3.08e-05	0.93127	1	0.51186	1	0.0071428	1	0.097411	1	0.021911	1	0.018066	1	0.12297	1	0.016893	1	0.98164	1	0.56711	1	0.62661	1	0.86423	1	0.11838	1	0.013403	1	0.40536	1	0.095371	1	NA	NA	0.12785	1
1p loss	0.063183	1	0.003227	1	4.3021e-20	6.3e-17	0.52675	1	0.61974	1	4.7436e-08	6.56e-05	0.29311	1	0.027131	1	0.20526	1	0.83329	1	0.025157	1	0.0063781	1	0.33119	1	0.031088	1	0.31914	1	0.14009	1	0.12161	1	0.16497	1	0.0037802	1	NA	NA	1.0745e-05	0.0142
1q loss	0.73395	1	0.20499	1	0.00055647	0.696	0.13696	1	0.22847	1	0.18813	1	0.092108	1	0.30558	1	0.7986	1	0.76009	1	0.45837	1	0.11651	1	0.1992	1	0.85154	1	0.99305	1	0.41759	1	0.97336	1	0.029641	1	0.36609	1	NA	NA	0.93624	1
2p loss	0.14924	1	0.31919	1	6.0297e-17	8.76e-14	6.0918e-05	0.0786	0.027574	1	0.084808	1	0.59787	1	0.88944	1	0.88126	1	0.4392	1	0.27712	1	0.53885	1	0.66444	1	0.074051	1	0.62635	1	0.57592	1	0.66515	1	0.97171	1	0.4629	1	NA	NA	0.85527	1
2q loss	0.16178	1	0.87478	1	2.7951e-22	4.12e-19	0.0025762	1	0.027574	1	0.2053	1	0.92729	1	0.62806	1	0.15257	1	0.42129	1	1	1	0.044442	1	0.99909	1	1.646e-05	0.0216	0.76811	1	0.33852	1	0.33536	1	0.35767	1	0.28078	1	NA	NA	0.23568	1
3p loss	0.22662	1	0.63746	1	1.2901e-218	2.05e-215	7.1694e-34	1.08e-30	0.073228	1	3.1948e-144	5.04e-141	5.5635e-14	7.98e-11	0.022159	1	0.00015966	0.204	4.0215e-13	5.73e-10	2.8828e-11	4.08e-08	0.037204	1	0.12007	1	5.3506e-08	7.38e-05	0.78656	1	0.77096	1	0.99643	1	0.39913	1	0.072889	1	NA	NA	0.71509	1
3q loss	0.44629	1	0.55962	1	6.5107e-39	9.9e-36	2.5381e-09	3.55e-06	0.96278	1	3.5394e-28	5.28e-25	0.022225	1	0.3037	1	0.087287	1	0.00044266	0.555	0.34479	1	0.10828	1	0.49846	1	0.091759	1	0.038293	1	0.91447	1	0.47972	1	0.71595	1	0.60942	1	NA	NA	0.62943	1
4p loss	0.38495	1	0.66437	1	1.5845e-69	2.47e-66	0.066213	1	0.0013054	1	5.218e-66	8.13e-63	0.00019778	0.251	1.9401e-05	0.0254	0.78007	1	9.6914e-14	1.39e-10	3.6653e-10	5.17e-07	0.0044921	1	0.000486	0.608	0.00056303	0.704	0.38772	1	0.74297	1	0.64745	1	0.55163	1	0.0063971	1	NA	NA	0.64576	1
4q loss	0.28071	1	0.33208	1	2.9262e-108	4.6e-105	1.6291e-06	0.00218	0.0024428	1	6.113e-88	9.59e-85	5.5154e-05	0.0714	0.16628	1	0.90907	1	6.5348e-24	9.66e-21	3.2834e-13	4.68e-10	0.040052	1	0.021763	1	0.025418	1	0.11643	1	0.58082	1	0.13911	1	0.46654	1	0.027857	1	NA	NA	0.62832	1
5p loss	0.17933	1	0.94443	1	6.0746e-16	8.79e-13	0.00043865	0.551	0.82734	1	9.7793e-19	1.43e-15	0.16373	1	0.52435	1	0.66317	1	1.69e-06	0.00226	0.46407	1	0.59932	1	0.96903	1	0.093947	1	0.63033	1	0.8355	1	0.23552	1	0.66755	1	0.17944	1	NA	NA	0.64097	1
5q loss	0.43383	1	0.21168	1	5.5178e-60	8.57e-57	0.85964	1	0.0043368	1	2.6501e-59	4.11e-56	5.3836e-05	0.0698	0.85525	1	0.15164	1	1.5303e-05	0.0201	0.00024545	0.31	0.087353	1	0.50519	1	0.005102	1	0.66111	1	0.46013	1	0.18011	1	0.56317	1	0.33852	1	NA	NA	0.0063962	1
6p loss	0.053479	1	0.0010005	1	3.9834e-28	5.94e-25	1	1	0.45215	1	4.3141e-26	6.4e-23	0.50098	1	0.78971	1	0.45664	1	0.00021217	0.269	0.79658	1	0.94981	1	0.68308	1	0.56089	1	0.24614	1	0.033222	1	0.84777	1	0.00068478	0.852	0.35114	1	NA	NA	0.084413	1
6q loss	0.027523	1	6.1472e-07	0.000835	1.1184e-54	1.73e-51	0.0017323	1	0.17313	1	7.1119e-54	1.1e-50	0.12558	1	0.85348	1	0.74902	1	2.2924e-06	0.00306	0.42707	1	0.0081948	1	0.93956	1	0.034806	1	0.1065	1	0.09368	1	0.95104	1	0.024922	1	0.58817	1	NA	NA	0.054953	1
7p loss	0.45032	1	0.25308	1	3.3681e-48	5.16e-45	1.0016e-13	1.43e-10	0.31884	1	1.8425e-37	2.79e-34	8.9967e-05	0.115	0.3771	1	0.73544	1	1.6563e-14	2.38e-11	0.090785	1	0.13473	1	0.0090329	1	0.51496	1	0.02239	1	0.64914	1	0.88837	1	0.42048	1	0.39129	1	NA	NA	0.043405	1
7q loss	0.74461	1	0.49304	1	4.4698e-20	6.54e-17	3.6473e-11	5.16e-08	0.029001	1	1.8269e-23	2.7e-20	3.8883e-05	0.0506	0.51735	1	0.55033	1	0.01895	1	1	1	0.7692	1	0.73789	1	0.68975	1	0.73436	1	0.042194	1	0.99036	1	0.76608	1	0.22131	1	NA	NA	0.045366	1
8p loss	0.92913	1	0.040958	1	7.9096e-53	1.22e-49	0.002384	1	0.078473	1	8.9762e-35	1.35e-31	0.036959	1	0.14084	1	0.78302	1	1.3266e-07	0.000182	6.0575e-10	8.53e-07	0.068049	1	0.69581	1	0.13389	1	0.52917	1	0.58589	1	0.096693	1	0.29561	1	0.0017204	1	NA	NA	0.86534	1
8q loss	0.18511	1	0.20301	1	1.7797e-12	2.53e-09	1	1	0.0058039	1	8.3651e-10	1.18e-06	0.064627	1	0.40412	1	0.79992	1	0.00014224	0.182	0.71897	1	0.33467	1	0.90233	1	0.28623	1	0.81832	1	0.41172	1	0.52522	1	0.10602	1	0.65556	1	NA	NA	0.64153	1
9p loss	2.528e-13	3.61e-10	0.066896	1	3.233e-49	4.96e-46	0.002335	1	0.21989	1	2.07e-49	3.18e-46	9.7049e-09	1.35e-05	0.34932	1	0.74179	1	0.013983	1	0.12736	1	0.0024714	1	0.39183	1	0.18717	1	0.045405	1	0.34204	1	0.035134	1	0.067142	1	0.27405	1	NA	NA	0.025431	1
9q loss	0.0001596	0.204	0.00073933	0.917	8.7971e-58	1.36e-54	0.0010392	1	0.78716	1	1.0965e-56	1.7e-53	0.00030973	0.39	0.0084936	1	0.43407	1	7.3019e-09	1.02e-05	0.0037175	1	0.15053	1	0.70835	1	0.025903	1	0.062632	1	0.30533	1	0.055187	1	0.028633	1	0.36839	1	NA	NA	0.017419	1
10p loss	0	0	0.37887	1	0	0	2.4981e-22	3.68e-19	0.0033934	1	9.9602e-37	1.51e-33	0.0037672	1	0.28545	1	0.85036	1	0.44593	1	9.0286e-59	1.4e-55	0.97393	1	0.022306	1	0.59266	1	0.47404	1	0.88365	1	0.82351	1	0.66031	1	0.79354	1	NA	NA	0.51429	1
10q loss	0	0	0.054077	1	0	0	2.5996e-17	3.78e-14	0.00096173	1	5.7093e-41	8.7e-38	0.080671	1	0.74983	1	0.63272	1	0.90151	1	2.5642e-56	3.96e-53	0.88574	1	0.10361	1	0.10769	1	0.50284	1	0.87117	1	0.27675	1	0.64408	1	0.97185	1	NA	NA	0.41914	1
11p loss	0.00257	1	0.46901	1	7.6297e-41	1.16e-37	1.9506e-05	0.0255	0.75849	1	1.1661e-36	1.76e-33	0.10519	1	4.7686e-05	0.0619	0.68479	1	2.6995e-12	3.84e-09	0.25109	1	0.34384	1	0.15966	1	2.2497e-06	0.00301	0.049413	1	0.67764	1	0.068549	1	0.81499	1	0.0027938	1	NA	NA	0.00020804	0.264
11q loss	0.63163	1	0.97407	1	2.0463e-44	3.13e-41	5.7642e-05	0.0745	0.88045	1	4.7044e-22	6.92e-19	0.039161	1	0.0012064	1	0.74148	1	1.0422e-05	0.0138	0.77743	1	0.89941	1	0.75032	1	0.068973	1	0.057272	1	0.83645	1	0.12905	1	0.45877	1	0.06945	1	NA	NA	0.038591	1
12p loss	0.058694	1	0.20649	1	2.1953e-07	0.000301	0.0062525	1	0.96107	1	1.3181e-10	1.86e-07	0.0058821	1	0.027731	1	0.1516	1	0.13656	1	0.15536	1	0.0078961	1	0.64682	1	0.76411	1	0.00057067	0.713	0.55406	1	0.55549	1	0.57788	1	0.88252	1	NA	NA	0.41425	1
12q loss	0.16256	1	0.32487	1	3.306e-16	4.79e-13	0.0018285	1	0.95023	1	7.0406e-16	1.02e-12	0.13208	1	0.075003	1	0.28639	1	0.0099248	1	0.86241	1	0.59267	1	0.62618	1	0.34655	1	0.097283	1	0.70328	1	0.58355	1	0.61533	1	0.4875	1	NA	NA	0.12852	1
13q loss	0.0016546	1	0.19423	1	7.6985e-88	1.21e-84	1.2229e-06	0.00165	0.17309	1	1.5322e-83	2.4e-80	9.9823e-12	1.42e-08	0.022812	1	0.42018	1	1.3848e-08	1.92e-05	0.21072	1	0.26988	1	0.08863	1	0.020274	1	0.56276	1	0.91259	1	0.097098	1	0.6038	1	0.13874	1	NA	NA	0.21965	1
14q loss	0.0027739	1	0.20452	1	1.7681e-38	2.68e-35	0.038094	1	0.82269	1	1.0591e-38	1.61e-35	2.0216e-07	0.000277	0.00015123	0.193	5.7527e-05	0.0744	0.00067101	0.836	0.086148	1	0.33923	1	0.11051	1	0.28273	1	0.74082	1	0.94249	1	0.18875	1	0.10945	1	0.34452	1	NA	NA	0.2478	1
15q loss	0.28325	1	0.0098788	1	3.1928e-60	4.96e-57	1.9577e-12	2.78e-09	0.93592	1	3.3792e-63	5.25e-60	1.8501e-06	0.00248	0.082208	1	0.13567	1	3.0396e-14	4.37e-11	0.0039772	1	0.70374	1	0.36172	1	0.60803	1	0.45434	1	0.11965	1	0.53901	1	0.19097	1	0.057856	1	NA	NA	0.70408	1
16p loss	0.0099496	1	0.75801	1	3.6283e-173	5.75e-170	8.6864e-20	1.27e-16	0.30446	1	1.4674e-134	2.31e-131	0.0010229	1	0.81346	1	0.77372	1	9.5361e-28	1.42e-24	3.4175e-06	0.00456	0.28332	1	0.94111	1	0.061348	1	0.43957	1	0.93875	1	0.82958	1	0.007299	1	0.96639	1	NA	NA	0.60142	1
16q loss	0.0014497	1	0.66781	1	1.1885e-229	1.89e-226	7.2999e-72	1.14e-68	0.084558	1	1.9533e-195	3.1e-192	1.0119e-06	0.00136	0.39197	1	0.64337	1	3.3765e-42	5.15e-39	0.00068935	0.857	0.22875	1	0.38653	1	0.032045	1	0.79674	1	0.14628	1	0.077852	1	1.0703e-05	0.0141	0.22072	1	NA	NA	9.9913e-06	0.0132
17p loss	0.025292	1	0.36167	1	2.1962e-195	3.49e-192	1.9559e-32	2.94e-29	0.0032059	1	5.3666e-162	8.48e-159	2.2176e-07	0.000304	0.0036627	1	0.055606	1	2.7408e-31	4.12e-28	3.2278e-23	4.76e-20	0.29197	1	0.48327	1	0.25949	1	0.71429	1	0.6102	1	0.77029	1	0.0013203	1	0.051184	1	NA	NA	0.052382	1
17q loss	0.86891	1	0.0075892	1	9.7926e-204	1.56e-200	8.718e-49	1.34e-45	0.94463	1	1.383e-170	2.19e-167	0.54437	1	0.067152	1	0.27676	1	2.1361e-45	3.27e-42	2.0968e-08	2.91e-05	0.50049	1	0.83112	1	0.16395	1	0.38956	1	0.50224	1	0.36732	1	8.9471e-05	0.115	0.46658	1	NA	NA	0.12966	1
18p loss	0.8052	1	0.00080764	0.999	1.8617e-147	2.94e-144	0.056978	1	0.91554	1	1.7416e-130	2.74e-127	1.7496e-26	2.6e-23	0.00021701	0.275	4.7999e-09	6.72e-06	4.9985e-12	7.09e-09	4.8077e-12	6.83e-09	0.005642	1	0.44941	1	0.70139	1	0.0091347	1	0.3281	1	0.35988	1	0.00034553	0.435	0.057156	1	NA	NA	0.4102	1
18q loss	0.84175	1	3.2201e-05	0.042	6.4487e-148	1.02e-144	0.88688	1	0.37317	1	1.8974e-112	2.98e-109	3.0926e-24	4.58e-21	8.3657e-07	0.00113	2.2858e-05	0.0299	5.2574e-14	7.55e-11	2.4579e-19	3.59e-16	0.29934	1	0.73251	1	0.067479	1	0.013486	1	0.39459	1	0.38708	1	0.00296	1	0.070832	1	NA	NA	0.096002	1
19p loss	0.0067079	1	0.83184	1	6.429e-67	1e-63	0.002286	1	0.66856	1	3.635e-51	5.59e-48	2.2156e-07	0.000304	0.30722	1	0.039921	1	3.8501e-06	0.00513	2.748e-06	0.00367	0.72019	1	0.64788	1	0.0073779	1	0.013302	1	0.12831	1	0.07264	1	0.30043	1	0.3179	1	NA	NA	0.15289	1
19q loss	0.066408	1	0.2731	1	5.1048e-64	7.94e-61	5.1637e-07	0.000703	0.87266	1	1.2785e-50	1.97e-47	0.007058	1	0.97122	1	0.1673	1	8.0141e-10	1.13e-06	0.0017085	1	0.18846	1	0.57246	1	0.14483	1	0.011145	1	0.69538	1	0.10921	1	0.0041262	1	0.86403	1	NA	NA	0.11598	1
20p loss	0.72367	1	0.77948	1	1.022e-10	1.45e-07	0.42156	1	0.96298	1	5.7453e-09	8.03e-06	0.0025282	1	0.043997	1	0.40051	1	0.1791	1	0.018664	1	0.99444	1	0.45655	1	0.62925	1	0.061586	1	0.52742	1	0.56131	1	0.90589	1	0.26113	1	NA	NA	0.21451	1
20q loss	0.63115	1	0.53399	1	9.6309e-09	1.34e-05	0.91981	1	0.33487	1	8.4202e-07	0.00114	0.020452	1	0.47232	1	0.61685	1	0.16536	1	0.057739	1	0.6442	1	0.72171	1	0.62269	1	0.1586	1	0.54594	1	0.92805	1	0.33643	1	0.45926	1	NA	NA	0.66626	1
21q loss	0.81743	1	0.34155	1	2.0997e-46	3.21e-43	0.14694	1	0.033697	1	1.6098e-27	2.4e-24	0.019889	1	0.0055486	1	0.72572	1	5.6481e-06	0.00751	1.0836e-07	0.000149	0.1104	1	5.2441e-05	0.068	0.064632	1	0.99616	1	0.081093	1	0.677	1	0.82957	1	0.064734	1	NA	NA	0.033362	1
22q loss	5.4709e-05	0.0708	0.26647	1	2.2789e-167	3.61e-164	5.5904e-34	8.42e-31	0.01697	1	8.776e-170	1.39e-166	0.00067627	0.842	0.00074684	0.925	0.52987	1	3.9165e-53	6.04e-50	0.65938	1	0.40135	1	0.86347	1	0.10236	1	0.011881	1	0.65794	1	0.11577	1	0.00085338	1	0.1822	1	NA	NA	0.18764	1
Xq loss	0.39439	1	0.084616	1	5.0409e-48	7.72e-45	4.0556e-07	0.000553	0.83763	1	5.4204e-35	8.18e-32	0.81997	1	0.55594	1	0.97547	1	2.7751e-10	3.92e-07	0.0034489	1	0.13576	1	0.24551	1	0.58503	1	0.92517	1	0.68379	1	0.99974	1	0.10233	1	0.44444	1	NA	NA	0.00028068	0.354