
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/376047/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/BLCA-TP/2909272/1.GDAC_mergedClustering.Finished/BLCA-TP.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=BLCA-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=BLCA-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=153, in cluster file=150, common to both=150
[1]  63 150
[1] "Amp Peak  1(1p34.2) mutation analysis"
[1] 3
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           45                           105 
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           45                           105 
[1] "Amp Peak  2(1q21.3) mutation analysis"
[1] 3
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                           76                            74 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                           76                            74 
[1] "Amp Peak  3(1q23.3) mutation analysis"
[1] 3
  AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE 
                           82                            68 
  AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE 
                           82                            68 
[1] "Amp Peak  4(3p25.2) mutation analysis"
[1] 3
  AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE 
                           72                            78 
  AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE 
                           72                            78 
[1] "Amp Peak  5(3q26.32) mutation analysis"
[1] 3
  AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE 
                            84                             66 
  AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE 
                            84                             66 
[1] "Amp Peak  6(4p16.3) mutation analysis"
[1] 3
  AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE 
                           31                           119 
  AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE 
                           31                           119 
[1] "Amp Peak  7(4q13.3) mutation analysis"
[1] 3
  AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE 
                           23                           127 
  AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE 
                           23                           127 
[1] "Amp Peak  8(5p15.1) mutation analysis"
[1] 3
  AMP PEAK  8(5P15.1) MUTATED AMP PEAK  8(5P15.1) WILD-TYPE 
                           69                            81 
  AMP PEAK  8(5P15.1) MUTATED AMP PEAK  8(5P15.1) WILD-TYPE 
                           69                            81 
[1] "Amp Peak  9(6p22.3) mutation analysis"
[1] 3
  AMP PEAK  9(6P22.3) MUTATED AMP PEAK  9(6P22.3) WILD-TYPE 
                           61                            89 
  AMP PEAK  9(6P22.3) MUTATED AMP PEAK  9(6P22.3) WILD-TYPE 
                           61                            89 
[1] "Amp Peak 10(6q12) mutation analysis"
[1] 3
  AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE 
                         25                         125 
  AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE 
                         25                         125 
[1] "Amp Peak 11(6q21) mutation analysis"
[1] 3
  AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE 
                         18                         132 
  AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE 
                         18                         132 
[1] "Amp Peak 12(7p11.2) mutation analysis"
[1] 3
  AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE 
                           78                            72 
  AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE 
                           78                            72 
[1] "Amp Peak 13(8p11.23) mutation analysis"
[1] 3
  AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE 
                            48                            102 
  AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE 
                            48                            102 
[1] "Amp Peak 14(8p11.21) mutation analysis"
[1] 3
  AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE 
                            48                            102 
  AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE 
                            48                            102 
[1] "Amp Peak 15(8q22.3) mutation analysis"
[1] 3
  AMP PEAK 15(8Q22.3) MUTATED AMP PEAK 15(8Q22.3) WILD-TYPE 
                           92                            58 
  AMP PEAK 15(8Q22.3) MUTATED AMP PEAK 15(8Q22.3) WILD-TYPE 
                           92                            58 
[1] "Amp Peak 16(8q24.21) mutation analysis"
[1] 3
  AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE 
                            88                             62 
  AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE 
                            88                             62 
[1] "Amp Peak 17(10p15.1) mutation analysis"
[1] 3
  AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE 
                            61                             89 
  AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE 
                            61                             89 
[1] "Amp Peak 18(11q13.3) mutation analysis"
[1] 3
  AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE 
                            59                             91 
  AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE 
                            59                             91 
[1] "Amp Peak 19(12q15) mutation analysis"
[1] 3
  AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE 
                          48                          102 
  AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE 
                          48                          102 
[1] "Amp Peak 20(13q22.1) mutation analysis"
[1] 3
  AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE 
                            49                            101 
  AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE 
                            49                            101 
[1] "Amp Peak 21(16p12.1) mutation analysis"
[1] 3
  AMP PEAK 21(16P12.1) MUTATED AMP PEAK 21(16P12.1) WILD-TYPE 
                            39                            111 
  AMP PEAK 21(16P12.1) MUTATED AMP PEAK 21(16P12.1) WILD-TYPE 
                            39                            111 
[1] "Amp Peak 22(17q11.2) mutation analysis"
[1] 3
  AMP PEAK 22(17Q11.2) MUTATED AMP PEAK 22(17Q11.2) WILD-TYPE 
                            68                             82 
  AMP PEAK 22(17Q11.2) MUTATED AMP PEAK 22(17Q11.2) WILD-TYPE 
                            68                             82 
[1] "Amp Peak 23(17q12) mutation analysis"
[1] 3
  AMP PEAK 23(17Q12) MUTATED AMP PEAK 23(17Q12) WILD-TYPE 
                          63                           87 
  AMP PEAK 23(17Q12) MUTATED AMP PEAK 23(17Q12) WILD-TYPE 
                          63                           87 
[1] "Amp Peak 24(19q12) mutation analysis"
[1] 3
  AMP PEAK 24(19Q12) MUTATED AMP PEAK 24(19Q12) WILD-TYPE 
                          65                           85 
  AMP PEAK 24(19Q12) MUTATED AMP PEAK 24(19Q12) WILD-TYPE 
                          65                           85 
[1] "Amp Peak 25(19q13.43) mutation analysis"
[1] 3
  AMP PEAK 25(19Q13.43) MUTATED AMP PEAK 25(19Q13.43) WILD-TYPE 
                             63                              87 
  AMP PEAK 25(19Q13.43) MUTATED AMP PEAK 25(19Q13.43) WILD-TYPE 
                             63                              87 
[1] "Amp Peak 26(20q11.21) mutation analysis"
[1] 3
  AMP PEAK 26(20Q11.21) MUTATED AMP PEAK 26(20Q11.21) WILD-TYPE 
                            104                              46 
  AMP PEAK 26(20Q11.21) MUTATED AMP PEAK 26(20Q11.21) WILD-TYPE 
                            104                              46 
[1] "Amp Peak 27(22q11.23) mutation analysis"
[1] 3
  AMP PEAK 27(22Q11.23) MUTATED AMP PEAK 27(22Q11.23) WILD-TYPE 
                             35                             115 
  AMP PEAK 27(22Q11.23) MUTATED AMP PEAK 27(22Q11.23) WILD-TYPE 
                             35                             115 
[1] "Del Peak  1(1p36.11) mutation analysis"
[1] 3
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                            27                            123 
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                            27                            123 
[1] "Del Peak  2(1q32.1) mutation analysis"
[1] 3
  DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE 
                           28                           122 
  DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE 
                           28                           122 
[1] "Del Peak  3(2q22.1) mutation analysis"
[1] 3
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                           43                           107 
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                           43                           107 
[1] "Del Peak  4(2q34) mutation analysis"
[1] 3
  DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE 
                         60                          90 
  DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE 
                         60                          90 
[1] "Del Peak  5(2q37.1) mutation analysis"
[1] 3
  DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE 
                           73                            77 
  DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE 
                           73                            77 
[1] "Del Peak  6(3p21.31) mutation analysis"
[1] 3
  DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE 
                            47                            103 
  DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE 
                            47                            103 
[1] "Del Peak  7(3p14.2) mutation analysis"
[1] 3
  DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE 
                           48                           102 
  DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE 
                           48                           102 
[1] "Del Peak  8(3p12.3) mutation analysis"
[1] 3
  DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE 
                           41                           109 
  DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE 
                           41                           109 
[1] "Del Peak  9(4q22.1) mutation analysis"
[1] 3
  DEL PEAK  9(4Q22.1) MUTATED DEL PEAK  9(4Q22.1) WILD-TYPE 
                           59                            91 
  DEL PEAK  9(4Q22.1) MUTATED DEL PEAK  9(4Q22.1) WILD-TYPE 
                           59                            91 
[1] "Del Peak 10(4q34.2) mutation analysis"
[1] 3
  DEL PEAK 10(4Q34.2) MUTATED DEL PEAK 10(4Q34.2) WILD-TYPE 
                           65                            85 
  DEL PEAK 10(4Q34.2) MUTATED DEL PEAK 10(4Q34.2) WILD-TYPE 
                           65                            85 
[1] "Del Peak 11(5q11.2) mutation analysis"
[1] 3
  DEL PEAK 11(5Q11.2) MUTATED DEL PEAK 11(5Q11.2) WILD-TYPE 
                           75                            75 
  DEL PEAK 11(5Q11.2) MUTATED DEL PEAK 11(5Q11.2) WILD-TYPE 
                           75                            75 
[1] "Del Peak 12(5q35.1) mutation analysis"
[1] 3
  DEL PEAK 12(5Q35.1) MUTATED DEL PEAK 12(5Q35.1) WILD-TYPE 
                           72                            78 
  DEL PEAK 12(5Q35.1) MUTATED DEL PEAK 12(5Q35.1) WILD-TYPE 
                           72                            78 
[1] "Del Peak 13(6p25.3) mutation analysis"
[1] 3
  DEL PEAK 13(6P25.3) MUTATED DEL PEAK 13(6P25.3) WILD-TYPE 
                           40                           110 
  DEL PEAK 13(6P25.3) MUTATED DEL PEAK 13(6P25.3) WILD-TYPE 
                           40                           110 
[1] "Del Peak 14(6q21) mutation analysis"
[1] 3
  DEL PEAK 14(6Q21) MUTATED DEL PEAK 14(6Q21) WILD-TYPE 
                         63                          87 
  DEL PEAK 14(6Q21) MUTATED DEL PEAK 14(6Q21) WILD-TYPE 
                         63                          87 
[1] "Del Peak 15(6q27) mutation analysis"
[1] 3
  DEL PEAK 15(6Q27) MUTATED DEL PEAK 15(6Q27) WILD-TYPE 
                         62                          88 
  DEL PEAK 15(6Q27) MUTATED DEL PEAK 15(6Q27) WILD-TYPE 
                         62                          88 
[1] "Del Peak 16(8p23.3) mutation analysis"
[1] 3
  DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE 
                           80                            70 
  DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE 
                           80                            70 
[1] "Del Peak 17(8p21.1) mutation analysis"
[1] 3
  DEL PEAK 17(8P21.1) MUTATED DEL PEAK 17(8P21.1) WILD-TYPE 
                           84                            66 
  DEL PEAK 17(8P21.1) MUTATED DEL PEAK 17(8P21.1) WILD-TYPE 
                           84                            66 
[1] "Del Peak 18(9p23) mutation analysis"
[1] 3
  DEL PEAK 18(9P23) MUTATED DEL PEAK 18(9P23) WILD-TYPE 
                         65                          85 
  DEL PEAK 18(9P23) MUTATED DEL PEAK 18(9P23) WILD-TYPE 
                         65                          85 
[1] "Del Peak 19(9p21.3) mutation analysis"
[1] 3
  DEL PEAK 19(9P21.3) MUTATED DEL PEAK 19(9P21.3) WILD-TYPE 
                           86                            64 
  DEL PEAK 19(9P21.3) MUTATED DEL PEAK 19(9P21.3) WILD-TYPE 
                           86                            64 
[1] "Del Peak 20(10p12.1) mutation analysis"
[1] 3
  DEL PEAK 20(10P12.1) MUTATED DEL PEAK 20(10P12.1) WILD-TYPE 
                            29                            121 
  DEL PEAK 20(10P12.1) MUTATED DEL PEAK 20(10P12.1) WILD-TYPE 
                            29                            121 
[1] "Del Peak 21(10q23.31) mutation analysis"
[1] 3
  DEL PEAK 21(10Q23.31) MUTATED DEL PEAK 21(10Q23.31) WILD-TYPE 
                             60                              90 
  DEL PEAK 21(10Q23.31) MUTATED DEL PEAK 21(10Q23.31) WILD-TYPE 
                             60                              90 
[1] "Del Peak 22(11p15.5) mutation analysis"
[1] 3
  DEL PEAK 22(11P15.5) MUTATED DEL PEAK 22(11P15.5) WILD-TYPE 
                            73                             77 
  DEL PEAK 22(11P15.5) MUTATED DEL PEAK 22(11P15.5) WILD-TYPE 
                            73                             77 
[1] "Del Peak 23(11q25) mutation analysis"
[1] 3
  DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE 
                          47                          103 
  DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE 
                          47                          103 
[1] "Del Peak 24(13q14.2) mutation analysis"
[1] 3
  DEL PEAK 24(13Q14.2) MUTATED DEL PEAK 24(13Q14.2) WILD-TYPE 
                            58                             92 
  DEL PEAK 24(13Q14.2) MUTATED DEL PEAK 24(13Q14.2) WILD-TYPE 
                            58                             92 
[1] "Del Peak 25(14q12) mutation analysis"
[1] 3
  DEL PEAK 25(14Q12) MUTATED DEL PEAK 25(14Q12) WILD-TYPE 
                          43                          107 
  DEL PEAK 25(14Q12) MUTATED DEL PEAK 25(14Q12) WILD-TYPE 
                          43                          107 
[1] "Del Peak 26(14q32.31) mutation analysis"
[1] 3
  DEL PEAK 26(14Q32.31) MUTATED DEL PEAK 26(14Q32.31) WILD-TYPE 
                             41                             109 
  DEL PEAK 26(14Q32.31) MUTATED DEL PEAK 26(14Q32.31) WILD-TYPE 
                             41                             109 
[1] "Del Peak 27(15q13.1) mutation analysis"
[1] 3
  DEL PEAK 27(15Q13.1) MUTATED DEL PEAK 27(15Q13.1) WILD-TYPE 
                            54                             96 
  DEL PEAK 27(15Q13.1) MUTATED DEL PEAK 27(15Q13.1) WILD-TYPE 
                            54                             96 
[1] "Del Peak 28(16p13.3) mutation analysis"
[1] 3
  DEL PEAK 28(16P13.3) MUTATED DEL PEAK 28(16P13.3) WILD-TYPE 
                            54                             96 
  DEL PEAK 28(16P13.3) MUTATED DEL PEAK 28(16P13.3) WILD-TYPE 
                            54                             96 
[1] "Del Peak 29(16q23.1) mutation analysis"
[1] 3
  DEL PEAK 29(16Q23.1) MUTATED DEL PEAK 29(16Q23.1) WILD-TYPE 
                            38                            112 
  DEL PEAK 29(16Q23.1) MUTATED DEL PEAK 29(16Q23.1) WILD-TYPE 
                            38                            112 
[1] "Del Peak 30(17p12) mutation analysis"
[1] 3
  DEL PEAK 30(17P12) MUTATED DEL PEAK 30(17P12) WILD-TYPE 
                          77                           73 
  DEL PEAK 30(17P12) MUTATED DEL PEAK 30(17P12) WILD-TYPE 
                          77                           73 
[1] "Del Peak 31(18q23) mutation analysis"
[1] 3
  DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE 
                          63                           87 
  DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE 
                          63                           87 
[1] "Del Peak 32(19p13.3) mutation analysis"
[1] 3
  DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE 
                            60                             90 
  DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE 
                            60                             90 
[1] "Del Peak 33(22q13.32) mutation analysis"
[1] 3
  DEL PEAK 33(22Q13.32) MUTATED DEL PEAK 33(22Q13.32) WILD-TYPE 
                             60                              90 
  DEL PEAK 33(22Q13.32) MUTATED DEL PEAK 33(22Q13.32) WILD-TYPE 
                             60                              90 
[1] "Del Peak 34(Xp11.3) mutation analysis"
[1] 3
  DEL PEAK 34(XP11.3) MUTATED DEL PEAK 34(XP11.3) WILD-TYPE 
                           39                           111 
  DEL PEAK 34(XP11.3) MUTATED DEL PEAK 34(XP11.3) WILD-TYPE 
                           39                           111 
[1] "Del Peak 35(Xq21.33) mutation analysis"
[1] 3
  DEL PEAK 35(XQ21.33) MUTATED DEL PEAK 35(XQ21.33) WILD-TYPE 
                            35                            115 
  DEL PEAK 35(XQ21.33) MUTATED DEL PEAK 35(XQ21.33) WILD-TYPE 
                            35                            115 
[1] "Del Peak 36(Xq22.3) mutation analysis"
[1] 3
  DEL PEAK 36(XQ22.3) MUTATED DEL PEAK 36(XQ22.3) WILD-TYPE 
                           32                           118 
  DEL PEAK 36(XQ22.3) MUTATED DEL PEAK 36(XQ22.3) WILD-TYPE 
                           32                           118 
[1] "data2feature, selection=ALL"
[1] "CN_CNMF"               "METHLYATION_CNMF"      "RPPA_CNMF"            
[4] "RPPA_CHIERARCHICAL"    "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL"
[7] "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 

Input Data has 8 rows and 150 columns.

Variable 1:'CN_CNMF':	nDistinctValues=6,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'RPPA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'RPPA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"               "METHLYATION_CNMF"      "RPPA_CNMF"            
[4] "RPPA_CHIERARCHICAL"    "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL"
[7] "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 150 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=6, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=4, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=4, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1p34.2) mutation analysis
D1V1, multiclass
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          20                            16
  CLUS_2                          17                            33
  CLUS_3                           3                            36
  CLUS_4                           5                            20
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           3                             8
  CLUS_2                           3                             7
  CLUS_3                           4                            10
  CLUS_4                           3                            13
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           2                            11
  CLUS_2                           4                            10
  CLUS_3                           7                            17
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           9                            41
  CLUS_2                          16                            17
  CLUS_3                          12                            26
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          13                            26
  CLUS_2                           7                            11
  CLUS_3                          17                            47
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          14                            21
  CLUS_2                          14                            54
  CLUS_3                          16                            30
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           3                             5
  CLUS_2                          11                            21
  CLUS_3                          30                            79

Clustering(2) Variable = Amp Peak  2(1q21.3) mutation analysis
D2V1, multiclass
D2V2, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          29                             7
  CLUS_2                          20                            30
  CLUS_3                          15                            24
  CLUS_4                          12                            13
D2V3, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                           1                            10
  CLUS_2                           7                             3
  CLUS_3                           5                             9
  CLUS_4                          10                             6
D2V4, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                           9                             4
  CLUS_2                           3                            11
  CLUS_3                          11                            13
D2V5, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          25                            25
  CLUS_2                          25                             8
  CLUS_3                          14                            24
D2V6, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          17                            22
  CLUS_2                          10                             8
  CLUS_3                          37                            27
D2V7, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          23                            12
  CLUS_2                          28                            40
  CLUS_3                          24                            22
D2V8, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                           4                             4
  CLUS_2                          21                            11
  CLUS_3                          50                            59

Clustering(3) Variable = Amp Peak  3(1q23.3) mutation analysis
D3V1, multiclass
D3V2, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          28                             8
  CLUS_2                          25                            25
  CLUS_3                          17                            22
  CLUS_4                          12                            13
D3V3, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                           5                             6
  CLUS_2                           5                             5
  CLUS_3                           6                             8
  CLUS_4                           9                             7
D3V4, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                           8                             5
  CLUS_2                           6                             8
  CLUS_3                          11                            13
D3V5, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          28                            22
  CLUS_2                          24                             9
  CLUS_3                          17                            21
D3V6, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          20                            19
  CLUS_2                          11                             7
  CLUS_3                          38                            26
D3V7, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          29                             6
  CLUS_2                          28                            40
  CLUS_3                          24                            22
D3V8, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                           5                             3
  CLUS_2                          27                             5
  CLUS_3                          49                            60

Clustering(4) Variable = Amp Peak  4(3p25.2) mutation analysis
D4V1, multiclass
D4V2, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          26                            10
  CLUS_2                          15                            35
  CLUS_3                          19                            20
  CLUS_4                          12                            13
D4V3, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                           2                             9
  CLUS_2                           6                             4
  CLUS_3                           6                             8
  CLUS_4                           6                            10
D4V4, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                           3                            10
  CLUS_2                           3                            11
  CLUS_3                          14                            10
D4V5, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          33                            17
  CLUS_2                          18                            15
  CLUS_3                          10                            28
D4V6, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          10                            29
  CLUS_2                           9                             9
  CLUS_3                          42                            22
D4V7, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          26                             9
  CLUS_2                          28                            40
  CLUS_3                          18                            28
D4V8, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                           2                             6
  CLUS_2                          25                             7
  CLUS_3                          45                            64

Clustering(5) Variable = Amp Peak  5(3q26.32) mutation analysis
D5V1, multiclass
D5V2, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           23                             13
  CLUS_2                           28                             22
  CLUS_3                           21                             18
  CLUS_4                           12                             13
D5V3, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                            7                              4
  CLUS_2                            7                              3
  CLUS_3                            5                              9
  CLUS_4                           12                              4
D5V4, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                            9                              4
  CLUS_2                            8                              6
  CLUS_3                           14                             10
D5V5, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           30                             20
  CLUS_2                           17                             16
  CLUS_3                           24                             14
D5V6, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           22                             17
  CLUS_2                           10                              8
  CLUS_3                           39                             25
D5V7, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           22                             13
  CLUS_2                           38                             30
  CLUS_3                           24                             22
D5V8, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                            5                              3
  CLUS_2                           22                             10
  CLUS_3                           57                             52

Clustering(6) Variable = Amp Peak  6(4p16.3) mutation analysis
D6V1, multiclass
D6V2, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           7                            29
  CLUS_2                           6                            44
  CLUS_3                          12                            27
  CLUS_4                           6                            19
D6V3, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           1                            10
  CLUS_2                           1                             9
  CLUS_3                           4                            10
  CLUS_4                           7                             9
D6V4, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           4                             9
  CLUS_2                           1                            13
  CLUS_3                           8                            16
D6V5, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                          16                            34
  CLUS_2                           4                            29
  CLUS_3                           8                            30
D6V6, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           9                            30
  CLUS_2                           1                            17
  CLUS_3                          18                            46
D6V7, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           8                            27
  CLUS_2                          19                            49
  CLUS_3                           4                            42
D6V8, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           3                             5
  CLUS_2                           8                            24
  CLUS_3                          20                            89

Clustering(7) Variable = Amp Peak  7(4q13.3) mutation analysis
D7V1, multiclass
D7V2, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                           9                            27
  CLUS_2                           8                            42
  CLUS_3                           5                            34
  CLUS_4                           1                            24
D7V3, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                           1                            10
  CLUS_2                           0                            10
  CLUS_3                           3                            11
  CLUS_4                           2                            14
D7V4, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                           2                            11
  CLUS_2                           1                            13
  CLUS_3                           3                            21
D7V5, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                           7                            43
  CLUS_2                           4                            29
  CLUS_3                           8                            30
D7V6, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                           8                            31
  CLUS_2                           1                            17
  CLUS_3                          10                            54
D7V7, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                           7                            28
  CLUS_2                          12                            56
  CLUS_3                           4                            42
D7V8, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                           2                             6
  CLUS_2                           7                            25
  CLUS_3                          14                            95

Clustering(8) Variable = Amp Peak  8(5p15.1) mutation analysis
D8V1, multiclass
D8V2, multiclass
        clus
vv       AMP PEAK  8(5P15.1) MUTATED AMP PEAK  8(5P15.1) WILD-TYPE
  CLUS_1                          22                            14
  CLUS_2                          21                            29
  CLUS_3                          17                            22
  CLUS_4                           9                            16
D8V3, multiclass
        clus
vv       AMP PEAK  8(5P15.1) MUTATED AMP PEAK  8(5P15.1) WILD-TYPE
  CLUS_1                           7                             4
  CLUS_2                           3                             7
  CLUS_3                           1                            13
  CLUS_4                           8                             8
D8V4, multiclass
        clus
vv       AMP PEAK  8(5P15.1) MUTATED AMP PEAK  8(5P15.1) WILD-TYPE
  CLUS_1                           5                             8
  CLUS_2                           7                             7
  CLUS_3                           7                            17
D8V5, multiclass
        clus
vv       AMP PEAK  8(5P15.1) MUTATED AMP PEAK  8(5P15.1) WILD-TYPE
  CLUS_1                          28                            22
  CLUS_2                          11                            22
  CLUS_3                          21                            17
D8V6, multiclass
        clus
vv       AMP PEAK  8(5P15.1) MUTATED AMP PEAK  8(5P15.1) WILD-TYPE
  CLUS_1                          22                            17
  CLUS_2                           7                            11
  CLUS_3                          31                            33
D8V7, multiclass
        clus
vv       AMP PEAK  8(5P15.1) MUTATED AMP PEAK  8(5P15.1) WILD-TYPE
  CLUS_1                          20                            15
  CLUS_2                          33                            35
  CLUS_3                          15                            31
D8V8, multiclass
        clus
vv       AMP PEAK  8(5P15.1) MUTATED AMP PEAK  8(5P15.1) WILD-TYPE
  CLUS_1                           5                             3
  CLUS_2                          19                            13
  CLUS_3                          44                            65

Clustering(9) Variable = Amp Peak  9(6p22.3) mutation analysis
D9V1, multiclass
D9V2, multiclass
        clus
vv       AMP PEAK  9(6P22.3) MUTATED AMP PEAK  9(6P22.3) WILD-TYPE
  CLUS_1                          24                            12
  CLUS_2                          19                            31
  CLUS_3                          12                            27
  CLUS_4                           6                            19
D9V3, multiclass
        clus
vv       AMP PEAK  9(6P22.3) MUTATED AMP PEAK  9(6P22.3) WILD-TYPE
  CLUS_1                           5                             6
  CLUS_2                           4                             6
  CLUS_3                           4                            10
  CLUS_4                           6                            10
D9V4, multiclass
        clus
vv       AMP PEAK  9(6P22.3) MUTATED AMP PEAK  9(6P22.3) WILD-TYPE
  CLUS_1                           4                             9
  CLUS_2                           6                             8
  CLUS_3                           9                            15
D9V5, multiclass
        clus
vv       AMP PEAK  9(6P22.3) MUTATED AMP PEAK  9(6P22.3) WILD-TYPE
  CLUS_1                          17                            33
  CLUS_2                          15                            18
  CLUS_3                          15                            23
D9V6, multiclass
        clus
vv       AMP PEAK  9(6P22.3) MUTATED AMP PEAK  9(6P22.3) WILD-TYPE
  CLUS_1                          17                            22
  CLUS_2                           8                            10
  CLUS_3                          22                            42
D9V7, multiclass
        clus
vv       AMP PEAK  9(6P22.3) MUTATED AMP PEAK  9(6P22.3) WILD-TYPE
  CLUS_1                          18                            17
  CLUS_2                          29                            39
  CLUS_3                          13                            33
D9V8, multiclass
        clus
vv       AMP PEAK  9(6P22.3) MUTATED AMP PEAK  9(6P22.3) WILD-TYPE
  CLUS_1                           3                             5
  CLUS_2                          16                            16
  CLUS_3                          41                            68

Clustering(10) Variable = Amp Peak 10(6q12) mutation analysis
D10V1, multiclass
D10V2, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                         7                          29
  CLUS_2                         9                          41
  CLUS_3                         4                          35
  CLUS_4                         5                          20
D10V3, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                         1                          10
  CLUS_2                         1                           9
  CLUS_3                         1                          13
  CLUS_4                         2                          14
D10V4, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                         1                          12
  CLUS_2                         1                          13
  CLUS_3                         3                          21
D10V5, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                         9                          41
  CLUS_2                         5                          28
  CLUS_3                         6                          32
D10V6, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                         8                          31
  CLUS_2                         3                          15
  CLUS_3                         9                          55
D10V7, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                         8                          27
  CLUS_2                        13                          55
  CLUS_3                         4                          42
D10V8, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                         5                           3
  CLUS_2                         6                          26
  CLUS_3                        14                          95

Clustering(11) Variable = Amp Peak 11(6q21) mutation analysis
D11V1, multiclass
D11V2, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         7                          29
  CLUS_2                         5                          45
  CLUS_3                         1                          38
  CLUS_4                         5                          20
D11V3, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         1                          10
  CLUS_2                         1                           9
  CLUS_3                         1                          13
  CLUS_4                         4                          12
D11V4, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         3                          10
  CLUS_2                         1                          13
  CLUS_3                         3                          21
D11V5, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         4                          46
  CLUS_2                         6                          27
  CLUS_3                         2                          36
D11V6, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         2                          37
  CLUS_2                         4                          14
  CLUS_3                         6                          58
D11V7, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         5                          30
  CLUS_2                         8                          60
  CLUS_3                         5                          41
D11V8, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         1                           7
  CLUS_2                         4                          28
  CLUS_3                        13                          96

Clustering(12) Variable = Amp Peak 12(7p11.2) mutation analysis
D12V1, multiclass
D12V2, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          27                             9
  CLUS_2                          27                            23
  CLUS_3                          17                            22
  CLUS_4                           7                            18
D12V3, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                           5                             6
  CLUS_2                           5                             5
  CLUS_3                           6                             8
  CLUS_4                          11                             5
D12V4, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                           9                             4
  CLUS_2                           5                             9
  CLUS_3                          13                            11
D12V5, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          26                            24
  CLUS_2                          19                            14
  CLUS_3                          19                            19
D12V6, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          19                            20
  CLUS_2                          11                             7
  CLUS_3                          34                            30
D12V7, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          19                            16
  CLUS_2                          37                            31
  CLUS_3                          22                            24
D12V8, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                           5                             3
  CLUS_2                          17                            15
  CLUS_3                          56                            53

Clustering(13) Variable = Amp Peak 13(8p11.23) mutation analysis
D13V1, multiclass
D13V2, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           15                             21
  CLUS_2                           11                             39
  CLUS_3                           17                             22
  CLUS_4                            5                             20
D13V3, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                            0                             11
  CLUS_2                            2                              8
  CLUS_3                            6                              8
  CLUS_4                            5                             11
D13V4, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                            4                              9
  CLUS_2                            0                             14
  CLUS_3                            9                             15
D13V5, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           20                             30
  CLUS_2                           11                             22
  CLUS_3                           10                             28
D13V6, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           10                             29
  CLUS_2                            5                             13
  CLUS_3                           26                             38
D13V7, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           14                             21
  CLUS_2                           24                             44
  CLUS_3                           10                             36
D13V8, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                            2                              6
  CLUS_2                           13                             19
  CLUS_3                           33                             76

Clustering(14) Variable = Amp Peak 14(8p11.21) mutation analysis
D14V1, multiclass
D14V2, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           17                             19
  CLUS_2                           11                             39
  CLUS_3                           16                             23
  CLUS_4                            4                             21
D14V3, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                            1                             10
  CLUS_2                            2                              8
  CLUS_3                            4                             10
  CLUS_4                            5                             11
D14V4, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                            3                             10
  CLUS_2                            2                             12
  CLUS_3                            7                             17
D14V5, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           20                             30
  CLUS_2                           11                             22
  CLUS_3                            9                             29
D14V6, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           10                             29
  CLUS_2                            6                             12
  CLUS_3                           24                             40
D14V7, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           13                             22
  CLUS_2                           27                             41
  CLUS_3                            8                             38
D14V8, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                            1                              7
  CLUS_2                           13                             19
  CLUS_3                           34                             75

Clustering(15) Variable = Amp Peak 15(8q22.3) mutation analysis
D15V1, multiclass
D15V2, multiclass
        clus
vv       AMP PEAK 15(8Q22.3) MUTATED AMP PEAK 15(8Q22.3) WILD-TYPE
  CLUS_1                          31                             5
  CLUS_2                          27                            23
  CLUS_3                          23                            16
  CLUS_4                          11                            14
D15V3, multiclass
        clus
vv       AMP PEAK 15(8Q22.3) MUTATED AMP PEAK 15(8Q22.3) WILD-TYPE
  CLUS_1                           5                             6
  CLUS_2                           5                             5
  CLUS_3                           7                             7
  CLUS_4                          13                             3
D15V4, multiclass
        clus
vv       AMP PEAK 15(8Q22.3) MUTATED AMP PEAK 15(8Q22.3) WILD-TYPE
  CLUS_1                          10                             3
  CLUS_2                           6                             8
  CLUS_3                          14                            10
D15V5, multiclass
        clus
vv       AMP PEAK 15(8Q22.3) MUTATED AMP PEAK 15(8Q22.3) WILD-TYPE
  CLUS_1                          36                            14
  CLUS_2                          20                            13
  CLUS_3                          19                            19
D15V6, multiclass
        clus
vv       AMP PEAK 15(8Q22.3) MUTATED AMP PEAK 15(8Q22.3) WILD-TYPE
  CLUS_1                          22                            17
  CLUS_2                          10                             8
  CLUS_3                          43                            21
D15V7, multiclass
        clus
vv       AMP PEAK 15(8Q22.3) MUTATED AMP PEAK 15(8Q22.3) WILD-TYPE
  CLUS_1                          27                             8
  CLUS_2                          43                            25
  CLUS_3                          21                            25
D15V8, multiclass
        clus
vv       AMP PEAK 15(8Q22.3) MUTATED AMP PEAK 15(8Q22.3) WILD-TYPE
  CLUS_1                           5                             3
  CLUS_2                          24                             8
  CLUS_3                          62                            47

Clustering(16) Variable = Amp Peak 16(8q24.21) mutation analysis
D16V1, multiclass
D16V2, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           28                              8
  CLUS_2                           27                             23
  CLUS_3                           23                             16
  CLUS_4                           10                             15
D16V3, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                            6                              5
  CLUS_2                            5                              5
  CLUS_3                            7                              7
  CLUS_4                           13                              3
D16V4, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           10                              3
  CLUS_2                            7                              7
  CLUS_3                           14                             10
D16V5, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           35                             15
  CLUS_2                           18                             15
  CLUS_3                           19                             19
D16V6, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           20                             19
  CLUS_2                            9                              9
  CLUS_3                           43                             21
D16V7, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           25                             10
  CLUS_2                           42                             26
  CLUS_3                           20                             26
D16V8, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                            5                              3
  CLUS_2                           22                             10
  CLUS_3                           60                             49

Clustering(17) Variable = Amp Peak 17(10p15.1) mutation analysis
D17V1, multiclass
D17V2, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           28                              8
  CLUS_2                           15                             35
  CLUS_3                           12                             27
  CLUS_4                            6                             19
D17V3, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                            5                              6
  CLUS_2                            6                              4
  CLUS_3                            7                              7
  CLUS_4                            7                              9
D17V4, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                            5                              8
  CLUS_2                            5                              9
  CLUS_3                           15                              9
D17V5, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           27                             23
  CLUS_2                           13                             20
  CLUS_3                           14                             24
D17V6, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           16                             23
  CLUS_2                            4                             14
  CLUS_3                           34                             30
D17V7, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           18                             17
  CLUS_2                           25                             43
  CLUS_3                           17                             29
D17V8, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                            3                              5
  CLUS_2                           18                             14
  CLUS_3                           39                             70

Clustering(18) Variable = Amp Peak 18(11q13.3) mutation analysis
D18V1, multiclass
D18V2, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           18                             18
  CLUS_2                           19                             31
  CLUS_3                           16                             23
  CLUS_4                            6                             19
D18V3, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                            2                              9
  CLUS_2                            3                              7
  CLUS_3                            5                              9
  CLUS_4                            7                              9
D18V4, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                            5                              8
  CLUS_2                            3                             11
  CLUS_3                            9                             15
D18V5, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           19                             31
  CLUS_2                            9                             24
  CLUS_3                           18                             20
D18V6, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           17                             22
  CLUS_2                            4                             14
  CLUS_3                           25                             39
D18V7, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           14                             21
  CLUS_2                           36                             32
  CLUS_3                            9                             37
D18V8, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                            6                              2
  CLUS_2                           12                             20
  CLUS_3                           41                             68

Clustering(19) Variable = Amp Peak 19(12q15) mutation analysis
D19V1, multiclass
D19V2, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         15                           21
  CLUS_2                         12                           38
  CLUS_3                         16                           23
  CLUS_4                          5                           20
D19V3, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                          5                            6
  CLUS_2                          3                            7
  CLUS_3                          5                            9
  CLUS_4                          8                            8
D19V4, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                          5                            8
  CLUS_2                          4                           10
  CLUS_3                         12                           12
D19V5, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         25                           25
  CLUS_2                          8                           25
  CLUS_3                          8                           30
D19V6, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                          5                           34
  CLUS_2                          7                           11
  CLUS_3                         29                           35
D19V7, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         15                           20
  CLUS_2                         22                           46
  CLUS_3                         11                           35
D19V8, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                          2                            6
  CLUS_2                         14                           18
  CLUS_3                         32                           77

Clustering(20) Variable = Amp Peak 20(13q22.1) mutation analysis
D20V1, multiclass
D20V2, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                           10                             26
  CLUS_2                           18                             32
  CLUS_3                           11                             28
  CLUS_4                           10                             15
D20V3, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                            4                              7
  CLUS_2                            3                              7
  CLUS_3                            2                             12
  CLUS_4                            4                             12
D20V4, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                            5                              8
  CLUS_2                            5                              9
  CLUS_3                            3                             21
D20V5, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                           16                             34
  CLUS_2                           12                             21
  CLUS_3                           14                             24
D20V6, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                           14                             25
  CLUS_2                            7                             11
  CLUS_3                           21                             43
D20V7, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                            9                             26
  CLUS_2                           22                             46
  CLUS_3                           18                             28
D20V8, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                            2                              6
  CLUS_2                            8                             24
  CLUS_3                           39                             70

Clustering(21) Variable = Amp Peak 21(16p12.1) mutation analysis
D21V1, multiclass
D21V2, multiclass
        clus
vv       AMP PEAK 21(16P12.1) MUTATED AMP PEAK 21(16P12.1) WILD-TYPE
  CLUS_1                           15                             21
  CLUS_2                           11                             39
  CLUS_3                            9                             30
  CLUS_4                            4                             21
D21V3, multiclass
        clus
vv       AMP PEAK 21(16P12.1) MUTATED AMP PEAK 21(16P12.1) WILD-TYPE
  CLUS_1                            5                              6
  CLUS_2                            2                              8
  CLUS_3                            1                             13
  CLUS_4                            7                              9
D21V4, multiclass
        clus
vv       AMP PEAK 21(16P12.1) MUTATED AMP PEAK 21(16P12.1) WILD-TYPE
  CLUS_1                            5                              8
  CLUS_2                            5                              9
  CLUS_3                            5                             19
D21V5, multiclass
        clus
vv       AMP PEAK 21(16P12.1) MUTATED AMP PEAK 21(16P12.1) WILD-TYPE
  CLUS_1                           14                             36
  CLUS_2                            9                             24
  CLUS_3                            9                             29
D21V6, multiclass
        clus
vv       AMP PEAK 21(16P12.1) MUTATED AMP PEAK 21(16P12.1) WILD-TYPE
  CLUS_1                            9                             30
  CLUS_2                            5                             13
  CLUS_3                           18                             46
D21V7, multiclass
        clus
vv       AMP PEAK 21(16P12.1) MUTATED AMP PEAK 21(16P12.1) WILD-TYPE
  CLUS_1                           10                             25
  CLUS_2                           19                             49
  CLUS_3                            9                             37
D21V8, multiclass
        clus
vv       AMP PEAK 21(16P12.1) MUTATED AMP PEAK 21(16P12.1) WILD-TYPE
  CLUS_1                            1                              7
  CLUS_2                            9                             23
  CLUS_3                           28                             81

Clustering(22) Variable = Amp Peak 22(17q11.2) mutation analysis
D22V1, multiclass
D22V2, multiclass
        clus
vv       AMP PEAK 22(17Q11.2) MUTATED AMP PEAK 22(17Q11.2) WILD-TYPE
  CLUS_1                           24                             12
  CLUS_2                           13                             37
  CLUS_3                           21                             18
  CLUS_4                           10                             15
D22V3, multiclass
        clus
vv       AMP PEAK 22(17Q11.2) MUTATED AMP PEAK 22(17Q11.2) WILD-TYPE
  CLUS_1                            3                              8
  CLUS_2                            5                              5
  CLUS_3                            6                              8
  CLUS_4                            7                              9
D22V4, multiclass
        clus
vv       AMP PEAK 22(17Q11.2) MUTATED AMP PEAK 22(17Q11.2) WILD-TYPE
  CLUS_1                            5                              8
  CLUS_2                            4                             10
  CLUS_3                           12                             12
D22V5, multiclass
        clus
vv       AMP PEAK 22(17Q11.2) MUTATED AMP PEAK 22(17Q11.2) WILD-TYPE
  CLUS_1                           33                             17
  CLUS_2                           11                             22
  CLUS_3                            9                             29
D22V6, multiclass
        clus
vv       AMP PEAK 22(17Q11.2) MUTATED AMP PEAK 22(17Q11.2) WILD-TYPE
  CLUS_1                           10                             29
  CLUS_2                            6                             12
  CLUS_3                           37                             27
D22V7, multiclass
        clus
vv       AMP PEAK 22(17Q11.2) MUTATED AMP PEAK 22(17Q11.2) WILD-TYPE
  CLUS_1                           22                             13
  CLUS_2                           31                             37
  CLUS_3                           14                             32
D22V8, multiclass
        clus
vv       AMP PEAK 22(17Q11.2) MUTATED AMP PEAK 22(17Q11.2) WILD-TYPE
  CLUS_1                            2                              6
  CLUS_2                           21                             11
  CLUS_3                           44                             65

Clustering(23) Variable = Amp Peak 23(17q12) mutation analysis
D23V1, multiclass
D23V2, multiclass
        clus
vv       AMP PEAK 23(17Q12) MUTATED AMP PEAK 23(17Q12) WILD-TYPE
  CLUS_1                         20                           16
  CLUS_2                         17                           33
  CLUS_3                         18                           21
  CLUS_4                          8                           17
D23V3, multiclass
        clus
vv       AMP PEAK 23(17Q12) MUTATED AMP PEAK 23(17Q12) WILD-TYPE
  CLUS_1                          4                            7
  CLUS_2                          5                            5
  CLUS_3                          6                            8
  CLUS_4                          6                           10
D23V4, multiclass
        clus
vv       AMP PEAK 23(17Q12) MUTATED AMP PEAK 23(17Q12) WILD-TYPE
  CLUS_1                          5                            8
  CLUS_2                          4                           10
  CLUS_3                         12                           12
D23V5, multiclass
        clus
vv       AMP PEAK 23(17Q12) MUTATED AMP PEAK 23(17Q12) WILD-TYPE
  CLUS_1                         27                           23
  CLUS_2                         12                           21
  CLUS_3                         11                           27
D23V6, multiclass
        clus
vv       AMP PEAK 23(17Q12) MUTATED AMP PEAK 23(17Q12) WILD-TYPE
  CLUS_1                         13                           26
  CLUS_2                          6                           12
  CLUS_3                         31                           33
D23V7, multiclass
        clus
vv       AMP PEAK 23(17Q12) MUTATED AMP PEAK 23(17Q12) WILD-TYPE
  CLUS_1                         22                           13
  CLUS_2                         26                           42
  CLUS_3                         14                           32
D23V8, multiclass
        clus
vv       AMP PEAK 23(17Q12) MUTATED AMP PEAK 23(17Q12) WILD-TYPE
  CLUS_1                          3                            5
  CLUS_2                         19                           13
  CLUS_3                         40                           69

Clustering(24) Variable = Amp Peak 24(19q12) mutation analysis
D24V1, multiclass
D24V2, multiclass
        clus
vv       AMP PEAK 24(19Q12) MUTATED AMP PEAK 24(19Q12) WILD-TYPE
  CLUS_1                         25                           11
  CLUS_2                         17                           33
  CLUS_3                         16                           23
  CLUS_4                          7                           18
D24V3, multiclass
        clus
vv       AMP PEAK 24(19Q12) MUTATED AMP PEAK 24(19Q12) WILD-TYPE
  CLUS_1                          4                            7
  CLUS_2                          6                            4
  CLUS_3                          5                            9
  CLUS_4                         10                            6
D24V4, multiclass
        clus
vv       AMP PEAK 24(19Q12) MUTATED AMP PEAK 24(19Q12) WILD-TYPE
  CLUS_1                          7                            6
  CLUS_2                          7                            7
  CLUS_3                         11                           13
D24V5, multiclass
        clus
vv       AMP PEAK 24(19Q12) MUTATED AMP PEAK 24(19Q12) WILD-TYPE
  CLUS_1                         25                           25
  CLUS_2                         14                           19
  CLUS_3                         14                           24
D24V6, multiclass
        clus
vv       AMP PEAK 24(19Q12) MUTATED AMP PEAK 24(19Q12) WILD-TYPE
  CLUS_1                         14                           25
  CLUS_2                          8                           10
  CLUS_3                         31                           33
D24V7, multiclass
        clus
vv       AMP PEAK 24(19Q12) MUTATED AMP PEAK 24(19Q12) WILD-TYPE
  CLUS_1                         18                           17
  CLUS_2                         27                           41
  CLUS_3                         20                           26
D24V8, multiclass
        clus
vv       AMP PEAK 24(19Q12) MUTATED AMP PEAK 24(19Q12) WILD-TYPE
  CLUS_1                          3                            5
  CLUS_2                         18                           14
  CLUS_3                         44                           65

Clustering(25) Variable = Amp Peak 25(19q13.43) mutation analysis
D25V1, multiclass
D25V2, multiclass
        clus
vv       AMP PEAK 25(19Q13.43) MUTATED AMP PEAK 25(19Q13.43) WILD-TYPE
  CLUS_1                            21                              15
  CLUS_2                            17                              33
  CLUS_3                            19                              20
  CLUS_4                             6                              19
D25V3, multiclass
        clus
vv       AMP PEAK 25(19Q13.43) MUTATED AMP PEAK 25(19Q13.43) WILD-TYPE
  CLUS_1                             4                               7
  CLUS_2                             4                               6
  CLUS_3                             6                               8
  CLUS_4                             9                               7
D25V4, multiclass
        clus
vv       AMP PEAK 25(19Q13.43) MUTATED AMP PEAK 25(19Q13.43) WILD-TYPE
  CLUS_1                             7                               6
  CLUS_2                             6                               8
  CLUS_3                            10                              14
D25V5, multiclass
        clus
vv       AMP PEAK 25(19Q13.43) MUTATED AMP PEAK 25(19Q13.43) WILD-TYPE
  CLUS_1                            26                              24
  CLUS_2                             9                              24
  CLUS_3                            16                              22
D25V6, multiclass
        clus
vv       AMP PEAK 25(19Q13.43) MUTATED AMP PEAK 25(19Q13.43) WILD-TYPE
  CLUS_1                            15                              24
  CLUS_2                             7                              11
  CLUS_3                            29                              35
D25V7, multiclass
        clus
vv       AMP PEAK 25(19Q13.43) MUTATED AMP PEAK 25(19Q13.43) WILD-TYPE
  CLUS_1                            19                              16
  CLUS_2                            27                              41
  CLUS_3                            16                              30
D25V8, multiclass
        clus
vv       AMP PEAK 25(19Q13.43) MUTATED AMP PEAK 25(19Q13.43) WILD-TYPE
  CLUS_1                             5                               3
  CLUS_2                            18                              14
  CLUS_3                            39                              70

Clustering(26) Variable = Amp Peak 26(20q11.21) mutation analysis
D26V1, multiclass
D26V2, multiclass
        clus
vv       AMP PEAK 26(20Q11.21) MUTATED AMP PEAK 26(20Q11.21) WILD-TYPE
  CLUS_1                            28                               8
  CLUS_2                            32                              18
  CLUS_3                            25                              14
  CLUS_4                            19                               6
D26V3, multiclass
        clus
vv       AMP PEAK 26(20Q11.21) MUTATED AMP PEAK 26(20Q11.21) WILD-TYPE
  CLUS_1                             9                               2
  CLUS_2                             6                               4
  CLUS_3                             7                               7
  CLUS_4                            12                               4
D26V4, multiclass
        clus
vv       AMP PEAK 26(20Q11.21) MUTATED AMP PEAK 26(20Q11.21) WILD-TYPE
  CLUS_1                             9                               4
  CLUS_2                            10                               4
  CLUS_3                            15                               9
D26V5, multiclass
        clus
vv       AMP PEAK 26(20Q11.21) MUTATED AMP PEAK 26(20Q11.21) WILD-TYPE
  CLUS_1                            39                              11
  CLUS_2                            23                              10
  CLUS_3                            23                              15
D26V6, multiclass
        clus
vv       AMP PEAK 26(20Q11.21) MUTATED AMP PEAK 26(20Q11.21) WILD-TYPE
  CLUS_1                            24                              15
  CLUS_2                            12                               6
  CLUS_3                            49                              15
D26V7, multiclass
        clus
vv       AMP PEAK 26(20Q11.21) MUTATED AMP PEAK 26(20Q11.21) WILD-TYPE
  CLUS_1                            28                               7
  CLUS_2                            44                              24
  CLUS_3                            31                              15
D26V8, multiclass
        clus
vv       AMP PEAK 26(20Q11.21) MUTATED AMP PEAK 26(20Q11.21) WILD-TYPE
  CLUS_1                             6                               2
  CLUS_2                            26                               6
  CLUS_3                            71                              38

Clustering(27) Variable = Amp Peak 27(22q11.23) mutation analysis
D27V1, multiclass
D27V2, multiclass
        clus
vv       AMP PEAK 27(22Q11.23) MUTATED AMP PEAK 27(22Q11.23) WILD-TYPE
  CLUS_1                            11                              25
  CLUS_2                             9                              41
  CLUS_3                            11                              28
  CLUS_4                             4                              21
D27V3, multiclass
        clus
vv       AMP PEAK 27(22Q11.23) MUTATED AMP PEAK 27(22Q11.23) WILD-TYPE
  CLUS_1                             2                               9
  CLUS_2                             3                               7
  CLUS_3                             4                              10
  CLUS_4                             3                              13
D27V4, multiclass
        clus
vv       AMP PEAK 27(22Q11.23) MUTATED AMP PEAK 27(22Q11.23) WILD-TYPE
  CLUS_1                             1                              12
  CLUS_2                             2                              12
  CLUS_3                             9                              15
D27V5, multiclass
        clus
vv       AMP PEAK 27(22Q11.23) MUTATED AMP PEAK 27(22Q11.23) WILD-TYPE
  CLUS_1                            18                              32
  CLUS_2                             6                              27
  CLUS_3                             8                              30
D27V6, multiclass
        clus
vv       AMP PEAK 27(22Q11.23) MUTATED AMP PEAK 27(22Q11.23) WILD-TYPE
  CLUS_1                            10                              29
  CLUS_2                             2                              16
  CLUS_3                            20                              44
D27V7, multiclass
        clus
vv       AMP PEAK 27(22Q11.23) MUTATED AMP PEAK 27(22Q11.23) WILD-TYPE
  CLUS_1                            10                              25
  CLUS_2                            18                              50
  CLUS_3                             7                              39
D27V8, multiclass
        clus
vv       AMP PEAK 27(22Q11.23) MUTATED AMP PEAK 27(22Q11.23) WILD-TYPE
  CLUS_1                             3                               5
  CLUS_2                             7                              25
  CLUS_3                            25                              84

Clustering(28) Variable = Del Peak  1(1p36.11) mutation analysis
D28V1, multiclass
D28V2, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            1                             35
  CLUS_2                           14                             36
  CLUS_3                            5                             34
  CLUS_4                            7                             18
D28V3, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            2                              9
  CLUS_2                            0                             10
  CLUS_3                            1                             13
  CLUS_4                            6                             10
D28V4, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            6                              7
  CLUS_2                            1                             13
  CLUS_3                            2                             22
D28V5, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            6                             44
  CLUS_2                            6                             27
  CLUS_3                           10                             28
D28V6, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            9                             30
  CLUS_2                            5                             13
  CLUS_3                            8                             56
D28V7, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            5                             30
  CLUS_2                           14                             54
  CLUS_3                            8                             38
D28V8, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            4                              4
  CLUS_2                            3                             29
  CLUS_3                           20                             89

Clustering(29) Variable = Del Peak  2(1q32.1) mutation analysis
D29V1, multiclass
D29V2, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          10                            26
  CLUS_2                           7                            43
  CLUS_3                           4                            35
  CLUS_4                           7                            18
D29V3, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           1                            10
  CLUS_2                           2                             8
  CLUS_3                           1                            13
  CLUS_4                           3                            13
D29V4, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           3                            10
  CLUS_2                           2                            12
  CLUS_3                           2                            22
D29V5, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          13                            37
  CLUS_2                           4                            29
  CLUS_3                           7                            31
D29V6, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           6                            33
  CLUS_2                           1                            17
  CLUS_3                          17                            47
D29V7, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           7                            28
  CLUS_2                          12                            56
  CLUS_3                           9                            37
D29V8, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           2                             6
  CLUS_2                           7                            25
  CLUS_3                          19                            90

Clustering(30) Variable = Del Peak  3(2q22.1) mutation analysis
D30V1, multiclass
D30V2, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          15                            21
  CLUS_2                          12                            38
  CLUS_3                          10                            29
  CLUS_4                           6                            19
D30V3, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           5                             6
  CLUS_2                           4                             6
  CLUS_3                           2                            12
  CLUS_4                           4                            12
D30V4, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           2                            11
  CLUS_2                           6                             8
  CLUS_3                           7                            17
D30V5, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          18                            32
  CLUS_2                           9                            24
  CLUS_3                          10                            28
D30V6, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           7                            32
  CLUS_2                           6                            12
  CLUS_3                          24                            40
D30V7, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           9                            26
  CLUS_2                          24                            44
  CLUS_3                           9                            37
D30V8, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           1                             7
  CLUS_2                           9                            23
  CLUS_3                          32                            77

Clustering(31) Variable = Del Peak  4(2q34) mutation analysis
D31V1, multiclass
D31V2, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        18                          18
  CLUS_2                        16                          34
  CLUS_3                        19                          20
  CLUS_4                         7                          18
D31V3, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                         6                           5
  CLUS_2                         4                           6
  CLUS_3                         3                          11
  CLUS_4                         8                           8
D31V4, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                         7                           6
  CLUS_2                         6                           8
  CLUS_3                         8                          16
D31V5, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        24                          26
  CLUS_2                         9                          24
  CLUS_3                        17                          21
D31V6, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        13                          26
  CLUS_2                         5                          13
  CLUS_3                        32                          32
D31V7, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        19                          16
  CLUS_2                        25                          43
  CLUS_3                        15                          31
D31V8, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                         4                           4
  CLUS_2                        17                          15
  CLUS_3                        38                          71

Clustering(32) Variable = Del Peak  5(2q37.1) mutation analysis
D32V1, multiclass
D32V2, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          20                            16
  CLUS_2                          17                            33
  CLUS_3                          26                            13
  CLUS_4                          10                            15
D32V3, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                           6                             5
  CLUS_2                           4                             6
  CLUS_3                           6                             8
  CLUS_4                           8                             8
D32V4, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                           7                             6
  CLUS_2                           6                             8
  CLUS_3                          11                            13
D32V5, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          31                            19
  CLUS_2                          12                            21
  CLUS_3                          18                            20
D32V6, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          14                            25
  CLUS_2                           7                            11
  CLUS_3                          40                            24
D32V7, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          23                            12
  CLUS_2                          29                            39
  CLUS_3                          20                            26
D32V8, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                           6                             2
  CLUS_2                          21                            11
  CLUS_3                          45                            64

Clustering(33) Variable = Del Peak  6(3p21.31) mutation analysis
D33V1, multiclass
D33V2, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                            7                             29
  CLUS_2                           21                             29
  CLUS_3                           10                             29
  CLUS_4                            9                             16
D33V3, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                            7                              4
  CLUS_2                            1                              9
  CLUS_3                            2                             12
  CLUS_4                            9                              7
D33V4, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                            8                              5
  CLUS_2                            8                              6
  CLUS_3                            3                             21
D33V5, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           12                             38
  CLUS_2                            5                             28
  CLUS_3                           21                             17
D33V6, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           19                             20
  CLUS_2                            5                             13
  CLUS_3                           14                             50
D33V7, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                            6                             29
  CLUS_2                           26                             42
  CLUS_3                           14                             32
D33V8, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                            4                              4
  CLUS_2                            5                             27
  CLUS_3                           37                             72

Clustering(34) Variable = Del Peak  7(3p14.2) mutation analysis
D34V1, multiclass
D34V2, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          10                            26
  CLUS_2                          20                            30
  CLUS_3                          11                            28
  CLUS_4                           7                            18
D34V3, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                           6                             5
  CLUS_2                           2                             8
  CLUS_3                           2                            12
  CLUS_4                           8                             8
D34V4, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                           7                             6
  CLUS_2                           9                             5
  CLUS_3                           2                            22
D34V5, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          14                            36
  CLUS_2                           4                            29
  CLUS_3                          21                            17
D34V6, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          20                            19
  CLUS_2                           3                            15
  CLUS_3                          16                            48
D34V7, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          10                            25
  CLUS_2                          25                            43
  CLUS_3                          12                            34
D34V8, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                           5                             3
  CLUS_2                           8                            24
  CLUS_3                          34                            75

Clustering(35) Variable = Del Peak  8(3p12.3) mutation analysis
D35V1, multiclass
D35V2, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                           8                            28
  CLUS_2                          18                            32
  CLUS_3                           9                            30
  CLUS_4                           6                            19
D35V3, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                           7                             4
  CLUS_2                           1                             9
  CLUS_3                           2                            12
  CLUS_4                           7                             9
D35V4, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                           6                             7
  CLUS_2                           9                             5
  CLUS_3                           2                            22
D35V5, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          12                            38
  CLUS_2                           4                            29
  CLUS_3                          19                            19
D35V6, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          17                            22
  CLUS_2                           3                            15
  CLUS_3                          15                            49
D35V7, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                           7                            28
  CLUS_2                          21                            47
  CLUS_3                          12                            34
D35V8, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                           4                             4
  CLUS_2                           6                            26
  CLUS_3                          30                            79

Clustering(36) Variable = Del Peak  9(4q22.1) mutation analysis
D36V1, multiclass
D36V2, multiclass
        clus
vv       DEL PEAK  9(4Q22.1) MUTATED DEL PEAK  9(4Q22.1) WILD-TYPE
  CLUS_1                          16                            20
  CLUS_2                          21                            29
  CLUS_3                          12                            27
  CLUS_4                          10                            15
D36V3, multiclass
        clus
vv       DEL PEAK  9(4Q22.1) MUTATED DEL PEAK  9(4Q22.1) WILD-TYPE
  CLUS_1                           5                             6
  CLUS_2                           7                             3
  CLUS_3                           5                             9
  CLUS_4                           6                            10
D36V4, multiclass
        clus
vv       DEL PEAK  9(4Q22.1) MUTATED DEL PEAK  9(4Q22.1) WILD-TYPE
  CLUS_1                           6                             7
  CLUS_2                           6                             8
  CLUS_3                          11                            13
D36V5, multiclass
        clus
vv       DEL PEAK  9(4Q22.1) MUTATED DEL PEAK  9(4Q22.1) WILD-TYPE
  CLUS_1                          18                            32
  CLUS_2                          13                            20
  CLUS_3                          20                            18
D36V6, multiclass
        clus
vv       DEL PEAK  9(4Q22.1) MUTATED DEL PEAK  9(4Q22.1) WILD-TYPE
  CLUS_1                          19                            20
  CLUS_2                           4                            14
  CLUS_3                          28                            36
D36V7, multiclass
        clus
vv       DEL PEAK  9(4Q22.1) MUTATED DEL PEAK  9(4Q22.1) WILD-TYPE
  CLUS_1                          13                            22
  CLUS_2                          27                            41
  CLUS_3                          19                            27
D36V8, multiclass
        clus
vv       DEL PEAK  9(4Q22.1) MUTATED DEL PEAK  9(4Q22.1) WILD-TYPE
  CLUS_1                           4                             4
  CLUS_2                          10                            22
  CLUS_3                          45                            64

Clustering(37) Variable = Del Peak 10(4q34.2) mutation analysis
D37V1, multiclass
D37V2, multiclass
        clus
vv       DEL PEAK 10(4Q34.2) MUTATED DEL PEAK 10(4Q34.2) WILD-TYPE
  CLUS_1                          19                            17
  CLUS_2                          21                            29
  CLUS_3                          13                            26
  CLUS_4                          12                            13
D37V3, multiclass
        clus
vv       DEL PEAK 10(4Q34.2) MUTATED DEL PEAK 10(4Q34.2) WILD-TYPE
  CLUS_1                           5                             6
  CLUS_2                           7                             3
  CLUS_3                           5                             9
  CLUS_4                           7                             9
D37V4, multiclass
        clus
vv       DEL PEAK 10(4Q34.2) MUTATED DEL PEAK 10(4Q34.2) WILD-TYPE
  CLUS_1                           7                             6
  CLUS_2                           6                             8
  CLUS_3                          11                            13
D37V5, multiclass
        clus
vv       DEL PEAK 10(4Q34.2) MUTATED DEL PEAK 10(4Q34.2) WILD-TYPE
  CLUS_1                          23                            27
  CLUS_2                          12                            21
  CLUS_3                          19                            19
D37V6, multiclass
        clus
vv       DEL PEAK 10(4Q34.2) MUTATED DEL PEAK 10(4Q34.2) WILD-TYPE
  CLUS_1                          19                            20
  CLUS_2                           3                            15
  CLUS_3                          32                            32
D37V7, multiclass
        clus
vv       DEL PEAK 10(4Q34.2) MUTATED DEL PEAK 10(4Q34.2) WILD-TYPE
  CLUS_1                          21                            14
  CLUS_2                          25                            43
  CLUS_3                          19                            27
D37V8, multiclass
        clus
vv       DEL PEAK 10(4Q34.2) MUTATED DEL PEAK 10(4Q34.2) WILD-TYPE
  CLUS_1                           7                             1
  CLUS_2                          17                            15
  CLUS_3                          41                            68

Clustering(38) Variable = Del Peak 11(5q11.2) mutation analysis
D38V1, multiclass
D38V2, multiclass
        clus
vv       DEL PEAK 11(5Q11.2) MUTATED DEL PEAK 11(5Q11.2) WILD-TYPE
  CLUS_1                          25                            11
  CLUS_2                          24                            26
  CLUS_3                          16                            23
  CLUS_4                          10                            15
D38V3, multiclass
        clus
vv       DEL PEAK 11(5Q11.2) MUTATED DEL PEAK 11(5Q11.2) WILD-TYPE
  CLUS_1                           5                             6
  CLUS_2                           3                             7
  CLUS_3                           7                             7
  CLUS_4                           7                             9
D38V4, multiclass
        clus
vv       DEL PEAK 11(5Q11.2) MUTATED DEL PEAK 11(5Q11.2) WILD-TYPE
  CLUS_1                           6                             7
  CLUS_2                           4                            10
  CLUS_3                          12                            12
D38V5, multiclass
        clus
vv       DEL PEAK 11(5Q11.2) MUTATED DEL PEAK 11(5Q11.2) WILD-TYPE
  CLUS_1                          28                            22
  CLUS_2                          17                            16
  CLUS_3                          18                            20
D38V6, multiclass
        clus
vv       DEL PEAK 11(5Q11.2) MUTATED DEL PEAK 11(5Q11.2) WILD-TYPE
  CLUS_1                          15                            24
  CLUS_2                           9                             9
  CLUS_3                          39                            25
D38V7, multiclass
        clus
vv       DEL PEAK 11(5Q11.2) MUTATED DEL PEAK 11(5Q11.2) WILD-TYPE
  CLUS_1                          22                            13
  CLUS_2                          31                            37
  CLUS_3                          22                            24
D38V8, multiclass
        clus
vv       DEL PEAK 11(5Q11.2) MUTATED DEL PEAK 11(5Q11.2) WILD-TYPE
  CLUS_1                           2                             6
  CLUS_2                          22                            10
  CLUS_3                          51                            58

Clustering(39) Variable = Del Peak 12(5q35.1) mutation analysis
D39V1, multiclass
D39V2, multiclass
        clus
vv       DEL PEAK 12(5Q35.1) MUTATED DEL PEAK 12(5Q35.1) WILD-TYPE
  CLUS_1                          26                            10
  CLUS_2                          20                            30
  CLUS_3                          18                            21
  CLUS_4                           8                            17
D39V3, multiclass
        clus
vv       DEL PEAK 12(5Q35.1) MUTATED DEL PEAK 12(5Q35.1) WILD-TYPE
  CLUS_1                           4                             7
  CLUS_2                           4                             6
  CLUS_3                           7                             7
  CLUS_4                           4                            12
D39V4, multiclass
        clus
vv       DEL PEAK 12(5Q35.1) MUTATED DEL PEAK 12(5Q35.1) WILD-TYPE
  CLUS_1                           4                             9
  CLUS_2                           4                            10
  CLUS_3                          11                            13
D39V5, multiclass
        clus
vv       DEL PEAK 12(5Q35.1) MUTATED DEL PEAK 12(5Q35.1) WILD-TYPE
  CLUS_1                          26                            24
  CLUS_2                          17                            16
  CLUS_3                          16                            22
D39V6, multiclass
        clus
vv       DEL PEAK 12(5Q35.1) MUTATED DEL PEAK 12(5Q35.1) WILD-TYPE
  CLUS_1                          16                            23
  CLUS_2                           7                            11
  CLUS_3                          36                            28
D39V7, multiclass
        clus
vv       DEL PEAK 12(5Q35.1) MUTATED DEL PEAK 12(5Q35.1) WILD-TYPE
  CLUS_1                          22                            13
  CLUS_2                          32                            36
  CLUS_3                          18                            28
D39V8, multiclass
        clus
vv       DEL PEAK 12(5Q35.1) MUTATED DEL PEAK 12(5Q35.1) WILD-TYPE
  CLUS_1                           3                             5
  CLUS_2                          21                            11
  CLUS_3                          48                            61

Clustering(40) Variable = Del Peak 13(6p25.3) mutation analysis
D40V1, multiclass
D40V2, multiclass
        clus
vv       DEL PEAK 13(6P25.3) MUTATED DEL PEAK 13(6P25.3) WILD-TYPE
  CLUS_1                          14                            22
  CLUS_2                          11                            39
  CLUS_3                           8                            31
  CLUS_4                           7                            18
D40V3, multiclass
        clus
vv       DEL PEAK 13(6P25.3) MUTATED DEL PEAK 13(6P25.3) WILD-TYPE
  CLUS_1                           2                             9
  CLUS_2                           1                             9
  CLUS_3                           3                            11
  CLUS_4                           8                             8
D40V4, multiclass
        clus
vv       DEL PEAK 13(6P25.3) MUTATED DEL PEAK 13(6P25.3) WILD-TYPE
  CLUS_1                           5                             8
  CLUS_2                           3                            11
  CLUS_3                           6                            18
D40V5, multiclass
        clus
vv       DEL PEAK 13(6P25.3) MUTATED DEL PEAK 13(6P25.3) WILD-TYPE
  CLUS_1                          14                            36
  CLUS_2                          12                            21
  CLUS_3                           9                            29
D40V6, multiclass
        clus
vv       DEL PEAK 13(6P25.3) MUTATED DEL PEAK 13(6P25.3) WILD-TYPE
  CLUS_1                          10                            29
  CLUS_2                           6                            12
  CLUS_3                          19                            45
D40V7, multiclass
        clus
vv       DEL PEAK 13(6P25.3) MUTATED DEL PEAK 13(6P25.3) WILD-TYPE
  CLUS_1                          12                            23
  CLUS_2                          15                            53
  CLUS_3                          13                            33
D40V8, multiclass
        clus
vv       DEL PEAK 13(6P25.3) MUTATED DEL PEAK 13(6P25.3) WILD-TYPE
  CLUS_1                           3                             5
  CLUS_2                           8                            24
  CLUS_3                          29                            80

Clustering(41) Variable = Del Peak 14(6q21) mutation analysis
D41V1, multiclass
D41V2, multiclass
        clus
vv       DEL PEAK 14(6Q21) MUTATED DEL PEAK 14(6Q21) WILD-TYPE
  CLUS_1                        20                          16
  CLUS_2                        12                          38
  CLUS_3                        19                          20
  CLUS_4                        12                          13
D41V3, multiclass
        clus
vv       DEL PEAK 14(6Q21) MUTATED DEL PEAK 14(6Q21) WILD-TYPE
  CLUS_1                         1                          10
  CLUS_2                         3                           7
  CLUS_3                         6                           8
  CLUS_4                         9                           7
D41V4, multiclass
        clus
vv       DEL PEAK 14(6Q21) MUTATED DEL PEAK 14(6Q21) WILD-TYPE
  CLUS_1                         7                           6
  CLUS_2                         3                          11
  CLUS_3                         9                          15
D41V5, multiclass
        clus
vv       DEL PEAK 14(6Q21) MUTATED DEL PEAK 14(6Q21) WILD-TYPE
  CLUS_1                        25                          25
  CLUS_2                        11                          22
  CLUS_3                        16                          22
D41V6, multiclass
        clus
vv       DEL PEAK 14(6Q21) MUTATED DEL PEAK 14(6Q21) WILD-TYPE
  CLUS_1                        13                          26
  CLUS_2                         4                          14
  CLUS_3                        35                          29
D41V7, multiclass
        clus
vv       DEL PEAK 14(6Q21) MUTATED DEL PEAK 14(6Q21) WILD-TYPE
  CLUS_1                        18                          17
  CLUS_2                        27                          41
  CLUS_3                        18                          28
D41V8, multiclass
        clus
vv       DEL PEAK 14(6Q21) MUTATED DEL PEAK 14(6Q21) WILD-TYPE
  CLUS_1                         1                           7
  CLUS_2                        17                          15
  CLUS_3                        45                          64

Clustering(42) Variable = Del Peak 15(6q27) mutation analysis
D42V1, multiclass
D42V2, multiclass
        clus
vv       DEL PEAK 15(6Q27) MUTATED DEL PEAK 15(6Q27) WILD-TYPE
  CLUS_1                        22                          14
  CLUS_2                        11                          39
  CLUS_3                        17                          22
  CLUS_4                        12                          13
D42V3, multiclass
        clus
vv       DEL PEAK 15(6Q27) MUTATED DEL PEAK 15(6Q27) WILD-TYPE
  CLUS_1                         1                          10
  CLUS_2                         4                           6
  CLUS_3                         6                           8
  CLUS_4                         8                           8
D42V4, multiclass
        clus
vv       DEL PEAK 15(6Q27) MUTATED DEL PEAK 15(6Q27) WILD-TYPE
  CLUS_1                         6                           7
  CLUS_2                         3                          11
  CLUS_3                        10                          14
D42V5, multiclass
        clus
vv       DEL PEAK 15(6Q27) MUTATED DEL PEAK 15(6Q27) WILD-TYPE
  CLUS_1                        27                          23
  CLUS_2                        13                          20
  CLUS_3                        14                          24
D42V6, multiclass
        clus
vv       DEL PEAK 15(6Q27) MUTATED DEL PEAK 15(6Q27) WILD-TYPE
  CLUS_1                        13                          26
  CLUS_2                         4                          14
  CLUS_3                        37                          27
D42V7, multiclass
        clus
vv       DEL PEAK 15(6Q27) MUTATED DEL PEAK 15(6Q27) WILD-TYPE
  CLUS_1                        19                          16
  CLUS_2                        24                          44
  CLUS_3                        19                          27
D42V8, multiclass
        clus
vv       DEL PEAK 15(6Q27) MUTATED DEL PEAK 15(6Q27) WILD-TYPE
  CLUS_1                         2                           6
  CLUS_2                        17                          15
  CLUS_3                        43                          66

Clustering(43) Variable = Del Peak 16(8p23.3) mutation analysis
D43V1, multiclass
D43V2, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          28                             8
  CLUS_2                          30                            20
  CLUS_3                          10                            29
  CLUS_4                          12                            13
D43V3, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                           7                             4
  CLUS_2                           6                             4
  CLUS_3                           5                             9
  CLUS_4                           4                            12
D43V4, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                           4                             9
  CLUS_2                           8                             6
  CLUS_3                          10                            14
D43V5, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          23                            27
  CLUS_2                          22                            11
  CLUS_3                          19                            19
D43V6, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          20                            19
  CLUS_2                          10                             8
  CLUS_3                          34                            30
D43V7, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          25                            10
  CLUS_2                          27                            41
  CLUS_3                          27                            19
D43V8, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                           7                             1
  CLUS_2                          22                            10
  CLUS_3                          50                            59

Clustering(44) Variable = Del Peak 17(8p21.1) mutation analysis
D44V1, multiclass
D44V2, multiclass
        clus
vv       DEL PEAK 17(8P21.1) MUTATED DEL PEAK 17(8P21.1) WILD-TYPE
  CLUS_1                          31                             5
  CLUS_2                          28                            22
  CLUS_3                          14                            25
  CLUS_4                          11                            14
D44V3, multiclass
        clus
vv       DEL PEAK 17(8P21.1) MUTATED DEL PEAK 17(8P21.1) WILD-TYPE
  CLUS_1                           7                             4
  CLUS_2                           6                             4
  CLUS_3                           5                             9
  CLUS_4                           4                            12
D44V4, multiclass
        clus
vv       DEL PEAK 17(8P21.1) MUTATED DEL PEAK 17(8P21.1) WILD-TYPE
  CLUS_1                           4                             9
  CLUS_2                           8                             6
  CLUS_3                          10                            14
D44V5, multiclass
        clus
vv       DEL PEAK 17(8P21.1) MUTATED DEL PEAK 17(8P21.1) WILD-TYPE
  CLUS_1                          27                            23
  CLUS_2                          21                            12
  CLUS_3                          21                            17
D44V6, multiclass
        clus
vv       DEL PEAK 17(8P21.1) MUTATED DEL PEAK 17(8P21.1) WILD-TYPE
  CLUS_1                          24                            15
  CLUS_2                           8                            10
  CLUS_3                          37                            27
D44V7, multiclass
        clus
vv       DEL PEAK 17(8P21.1) MUTATED DEL PEAK 17(8P21.1) WILD-TYPE
  CLUS_1                          28                             7
  CLUS_2                          30                            38
  CLUS_3                          25                            21
D44V8, multiclass
        clus
vv       DEL PEAK 17(8P21.1) MUTATED DEL PEAK 17(8P21.1) WILD-TYPE
  CLUS_1                           7                             1
  CLUS_2                          25                             7
  CLUS_3                          51                            58

Clustering(45) Variable = Del Peak 18(9p23) mutation analysis
D45V1, multiclass
D45V2, multiclass
        clus
vv       DEL PEAK 18(9P23) MUTATED DEL PEAK 18(9P23) WILD-TYPE
  CLUS_1                        15                          21
  CLUS_2                        20                          30
  CLUS_3                        19                          20
  CLUS_4                        11                          14
D45V3, multiclass
        clus
vv       DEL PEAK 18(9P23) MUTATED DEL PEAK 18(9P23) WILD-TYPE
  CLUS_1                         4                           7
  CLUS_2                         4                           6
  CLUS_3                        10                           4
  CLUS_4                         7                           9
D45V4, multiclass
        clus
vv       DEL PEAK 18(9P23) MUTATED DEL PEAK 18(9P23) WILD-TYPE
  CLUS_1                         5                           8
  CLUS_2                         7                           7
  CLUS_3                        13                          11
D45V5, multiclass
        clus
vv       DEL PEAK 18(9P23) MUTATED DEL PEAK 18(9P23) WILD-TYPE
  CLUS_1                        25                          25
  CLUS_2                        12                          21
  CLUS_3                        18                          20
D45V6, multiclass
        clus
vv       DEL PEAK 18(9P23) MUTATED DEL PEAK 18(9P23) WILD-TYPE
  CLUS_1                        17                          22
  CLUS_2                         4                          14
  CLUS_3                        34                          30
D45V7, multiclass
        clus
vv       DEL PEAK 18(9P23) MUTATED DEL PEAK 18(9P23) WILD-TYPE
  CLUS_1                        18                          17
  CLUS_2                        26                          42
  CLUS_3                        21                          25
D45V8, multiclass
        clus
vv       DEL PEAK 18(9P23) MUTATED DEL PEAK 18(9P23) WILD-TYPE
  CLUS_1                         3                           5
  CLUS_2                        15                          17
  CLUS_3                        47                          62

Clustering(46) Variable = Del Peak 19(9p21.3) mutation analysis
D46V1, multiclass
D46V2, multiclass
        clus
vv       DEL PEAK 19(9P21.3) MUTATED DEL PEAK 19(9P21.3) WILD-TYPE
  CLUS_1                          19                            17
  CLUS_2                          28                            22
  CLUS_3                          26                            13
  CLUS_4                          13                            12
D46V3, multiclass
        clus
vv       DEL PEAK 19(9P21.3) MUTATED DEL PEAK 19(9P21.3) WILD-TYPE
  CLUS_1                           4                             7
  CLUS_2                           7                             3
  CLUS_3                          12                             2
  CLUS_4                           9                             7
D46V4, multiclass
        clus
vv       DEL PEAK 19(9P21.3) MUTATED DEL PEAK 19(9P21.3) WILD-TYPE
  CLUS_1                           8                             5
  CLUS_2                           8                             6
  CLUS_3                          16                             8
D46V5, multiclass
        clus
vv       DEL PEAK 19(9P21.3) MUTATED DEL PEAK 19(9P21.3) WILD-TYPE
  CLUS_1                          32                            18
  CLUS_2                          15                            18
  CLUS_3                          21                            17
D46V6, multiclass
        clus
vv       DEL PEAK 19(9P21.3) MUTATED DEL PEAK 19(9P21.3) WILD-TYPE
  CLUS_1                          20                            19
  CLUS_2                           7                            11
  CLUS_3                          41                            23
D46V7, multiclass
        clus
vv       DEL PEAK 19(9P21.3) MUTATED DEL PEAK 19(9P21.3) WILD-TYPE
  CLUS_1                          22                            13
  CLUS_2                          39                            29
  CLUS_3                          25                            21
D46V8, multiclass
        clus
vv       DEL PEAK 19(9P21.3) MUTATED DEL PEAK 19(9P21.3) WILD-TYPE
  CLUS_1                           3                             5
  CLUS_2                          19                            13
  CLUS_3                          64                            45

Clustering(47) Variable = Del Peak 20(10p12.1) mutation analysis
D47V1, multiclass
D47V2, multiclass
        clus
vv       DEL PEAK 20(10P12.1) MUTATED DEL PEAK 20(10P12.1) WILD-TYPE
  CLUS_1                            7                             29
  CLUS_2                           10                             40
  CLUS_3                            9                             30
  CLUS_4                            3                             22
D47V3, multiclass
        clus
vv       DEL PEAK 20(10P12.1) MUTATED DEL PEAK 20(10P12.1) WILD-TYPE
  CLUS_1                            3                              8
  CLUS_2                            3                              7
  CLUS_3                            1                             13
  CLUS_4                            3                             13
D47V4, multiclass
        clus
vv       DEL PEAK 20(10P12.1) MUTATED DEL PEAK 20(10P12.1) WILD-TYPE
  CLUS_1                            3                             10
  CLUS_2                            3                             11
  CLUS_3                            4                             20
D47V5, multiclass
        clus
vv       DEL PEAK 20(10P12.1) MUTATED DEL PEAK 20(10P12.1) WILD-TYPE
  CLUS_1                            6                             44
  CLUS_2                            5                             28
  CLUS_3                           12                             26
D47V6, multiclass
        clus
vv       DEL PEAK 20(10P12.1) MUTATED DEL PEAK 20(10P12.1) WILD-TYPE
  CLUS_1                           13                             26
  CLUS_2                            2                             16
  CLUS_3                            8                             56
D47V7, multiclass
        clus
vv       DEL PEAK 20(10P12.1) MUTATED DEL PEAK 20(10P12.1) WILD-TYPE
  CLUS_1                           10                             25
  CLUS_2                           13                             55
  CLUS_3                            6                             40
D47V8, multiclass
        clus
vv       DEL PEAK 20(10P12.1) MUTATED DEL PEAK 20(10P12.1) WILD-TYPE
  CLUS_1                            4                              4
  CLUS_2                            8                             24
  CLUS_3                           17                             92

Clustering(48) Variable = Del Peak 21(10q23.31) mutation analysis
D48V1, multiclass
D48V2, multiclass
        clus
vv       DEL PEAK 21(10Q23.31) MUTATED DEL PEAK 21(10Q23.31) WILD-TYPE
  CLUS_1                            24                              12
  CLUS_2                            14                              36
  CLUS_3                            14                              25
  CLUS_4                             8                              17
D48V3, multiclass
        clus
vv       DEL PEAK 21(10Q23.31) MUTATED DEL PEAK 21(10Q23.31) WILD-TYPE
  CLUS_1                             4                               7
  CLUS_2                             6                               4
  CLUS_3                             3                              11
  CLUS_4                             4                              12
D48V4, multiclass
        clus
vv       DEL PEAK 21(10Q23.31) MUTATED DEL PEAK 21(10Q23.31) WILD-TYPE
  CLUS_1                             5                               8
  CLUS_2                             4                              10
  CLUS_3                             8                              16
D48V5, multiclass
        clus
vv       DEL PEAK 21(10Q23.31) MUTATED DEL PEAK 21(10Q23.31) WILD-TYPE
  CLUS_1                            24                              26
  CLUS_2                            10                              23
  CLUS_3                            16                              22
D48V6, multiclass
        clus
vv       DEL PEAK 21(10Q23.31) MUTATED DEL PEAK 21(10Q23.31) WILD-TYPE
  CLUS_1                            16                              23
  CLUS_2                             3                              15
  CLUS_3                            31                              33
D48V7, multiclass
        clus
vv       DEL PEAK 21(10Q23.31) MUTATED DEL PEAK 21(10Q23.31) WILD-TYPE
  CLUS_1                            17                              18
  CLUS_2                            27                              41
  CLUS_3                            16                              30
D48V8, multiclass
        clus
vv       DEL PEAK 21(10Q23.31) MUTATED DEL PEAK 21(10Q23.31) WILD-TYPE
  CLUS_1                             3                               5
  CLUS_2                            18                              14
  CLUS_3                            39                              70

Clustering(49) Variable = Del Peak 22(11p15.5) mutation analysis
D49V1, multiclass
D49V2, multiclass
        clus
vv       DEL PEAK 22(11P15.5) MUTATED DEL PEAK 22(11P15.5) WILD-TYPE
  CLUS_1                           21                             15
  CLUS_2                           16                             34
  CLUS_3                           22                             17
  CLUS_4                           14                             11
D49V3, multiclass
        clus
vv       DEL PEAK 22(11P15.5) MUTATED DEL PEAK 22(11P15.5) WILD-TYPE
  CLUS_1                            3                              8
  CLUS_2                            7                              3
  CLUS_3                            8                              6
  CLUS_4                            6                             10
D49V4, multiclass
        clus
vv       DEL PEAK 22(11P15.5) MUTATED DEL PEAK 22(11P15.5) WILD-TYPE
  CLUS_1                            5                              8
  CLUS_2                            6                              8
  CLUS_3                           13                             11
D49V5, multiclass
        clus
vv       DEL PEAK 22(11P15.5) MUTATED DEL PEAK 22(11P15.5) WILD-TYPE
  CLUS_1                           30                             20
  CLUS_2                           13                             20
  CLUS_3                           16                             22
D49V6, multiclass
        clus
vv       DEL PEAK 22(11P15.5) MUTATED DEL PEAK 22(11P15.5) WILD-TYPE
  CLUS_1                           14                             25
  CLUS_2                            3                             15
  CLUS_3                           42                             22
D49V7, multiclass
        clus
vv       DEL PEAK 22(11P15.5) MUTATED DEL PEAK 22(11P15.5) WILD-TYPE
  CLUS_1                           26                              9
  CLUS_2                           26                             42
  CLUS_3                           20                             26
D49V8, multiclass
        clus
vv       DEL PEAK 22(11P15.5) MUTATED DEL PEAK 22(11P15.5) WILD-TYPE
  CLUS_1                            5                              3
  CLUS_2                           22                             10
  CLUS_3                           45                             64

Clustering(50) Variable = Del Peak 23(11q25) mutation analysis
D50V1, multiclass
D50V2, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         12                           24
  CLUS_2                         14                           36
  CLUS_3                         16                           23
  CLUS_4                          5                           20
D50V3, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                          4                            7
  CLUS_2                          1                            9
  CLUS_3                          6                            8
  CLUS_4                          6                           10
D50V4, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                          4                            9
  CLUS_2                          5                            9
  CLUS_3                          8                           16
D50V5, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         18                           32
  CLUS_2                          6                           27
  CLUS_3                         10                           28
D50V6, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         11                           28
  CLUS_2                          3                           15
  CLUS_3                         20                           44
D50V7, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         14                           21
  CLUS_2                         23                           45
  CLUS_3                          9                           37
D50V8, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                          4                            4
  CLUS_2                         14                           18
  CLUS_3                         28                           81

Clustering(51) Variable = Del Peak 24(13q14.2) mutation analysis
D51V1, multiclass
D51V2, multiclass
        clus
vv       DEL PEAK 24(13Q14.2) MUTATED DEL PEAK 24(13Q14.2) WILD-TYPE
  CLUS_1                           14                             22
  CLUS_2                           19                             31
  CLUS_3                           16                             23
  CLUS_4                            9                             16
D51V3, multiclass
        clus
vv       DEL PEAK 24(13Q14.2) MUTATED DEL PEAK 24(13Q14.2) WILD-TYPE
  CLUS_1                            2                              9
  CLUS_2                            6                              4
  CLUS_3                            1                             13
  CLUS_4                           12                              4
D51V4, multiclass
        clus
vv       DEL PEAK 24(13Q14.2) MUTATED DEL PEAK 24(13Q14.2) WILD-TYPE
  CLUS_1                           10                              3
  CLUS_2                            3                             11
  CLUS_3                            8                             16
D51V5, multiclass
        clus
vv       DEL PEAK 24(13Q14.2) MUTATED DEL PEAK 24(13Q14.2) WILD-TYPE
  CLUS_1                           16                             34
  CLUS_2                           13                             20
  CLUS_3                           21                             17
D51V6, multiclass
        clus
vv       DEL PEAK 24(13Q14.2) MUTATED DEL PEAK 24(13Q14.2) WILD-TYPE
  CLUS_1                           20                             19
  CLUS_2                            5                             13
  CLUS_3                           25                             39
D51V7, multiclass
        clus
vv       DEL PEAK 24(13Q14.2) MUTATED DEL PEAK 24(13Q14.2) WILD-TYPE
  CLUS_1                           13                             22
  CLUS_2                           25                             43
  CLUS_3                           19                             27
D51V8, multiclass
        clus
vv       DEL PEAK 24(13Q14.2) MUTATED DEL PEAK 24(13Q14.2) WILD-TYPE
  CLUS_1                            4                              4
  CLUS_2                           13                             19
  CLUS_3                           40                             69

Clustering(52) Variable = Del Peak 25(14q12) mutation analysis
D52V1, multiclass
D52V2, multiclass
        clus
vv       DEL PEAK 25(14Q12) MUTATED DEL PEAK 25(14Q12) WILD-TYPE
  CLUS_1                         20                           16
  CLUS_2                         12                           38
  CLUS_3                          6                           33
  CLUS_4                          5                           20
D52V3, multiclass
        clus
vv       DEL PEAK 25(14Q12) MUTATED DEL PEAK 25(14Q12) WILD-TYPE
  CLUS_1                          2                            9
  CLUS_2                          2                            8
  CLUS_3                          5                            9
  CLUS_4                          4                           12
D52V4, multiclass
        clus
vv       DEL PEAK 25(14Q12) MUTATED DEL PEAK 25(14Q12) WILD-TYPE
  CLUS_1                          4                            9
  CLUS_2                          2                           12
  CLUS_3                          7                           17
D52V5, multiclass
        clus
vv       DEL PEAK 25(14Q12) MUTATED DEL PEAK 25(14Q12) WILD-TYPE
  CLUS_1                         17                           33
  CLUS_2                         10                           23
  CLUS_3                          6                           32
D52V6, multiclass
        clus
vv       DEL PEAK 25(14Q12) MUTATED DEL PEAK 25(14Q12) WILD-TYPE
  CLUS_1                          5                           34
  CLUS_2                          5                           13
  CLUS_3                         23                           41
D52V7, multiclass
        clus
vv       DEL PEAK 25(14Q12) MUTATED DEL PEAK 25(14Q12) WILD-TYPE
  CLUS_1                         15                           20
  CLUS_2                         16                           52
  CLUS_3                         12                           34
D52V8, multiclass
        clus
vv       DEL PEAK 25(14Q12) MUTATED DEL PEAK 25(14Q12) WILD-TYPE
  CLUS_1                          1                            7
  CLUS_2                         14                           18
  CLUS_3                         28                           81

Clustering(53) Variable = Del Peak 26(14q32.31) mutation analysis
D53V1, multiclass
D53V2, multiclass
        clus
vv       DEL PEAK 26(14Q32.31) MUTATED DEL PEAK 26(14Q32.31) WILD-TYPE
  CLUS_1                            17                              19
  CLUS_2                            12                              38
  CLUS_3                             7                              32
  CLUS_4                             5                              20
D53V3, multiclass
        clus
vv       DEL PEAK 26(14Q32.31) MUTATED DEL PEAK 26(14Q32.31) WILD-TYPE
  CLUS_1                             2                               9
  CLUS_2                             2                               8
  CLUS_3                             5                               9
  CLUS_4                             4                              12
D53V4, multiclass
        clus
vv       DEL PEAK 26(14Q32.31) MUTATED DEL PEAK 26(14Q32.31) WILD-TYPE
  CLUS_1                             4                               9
  CLUS_2                             3                              11
  CLUS_3                             6                              18
D53V5, multiclass
        clus
vv       DEL PEAK 26(14Q32.31) MUTATED DEL PEAK 26(14Q32.31) WILD-TYPE
  CLUS_1                            16                              34
  CLUS_2                             8                              25
  CLUS_3                             6                              32
D53V6, multiclass
        clus
vv       DEL PEAK 26(14Q32.31) MUTATED DEL PEAK 26(14Q32.31) WILD-TYPE
  CLUS_1                             6                              33
  CLUS_2                             5                              13
  CLUS_3                            19                              45
D53V7, multiclass
        clus
vv       DEL PEAK 26(14Q32.31) MUTATED DEL PEAK 26(14Q32.31) WILD-TYPE
  CLUS_1                            19                              16
  CLUS_2                            13                              55
  CLUS_3                             9                              37
D53V8, multiclass
        clus
vv       DEL PEAK 26(14Q32.31) MUTATED DEL PEAK 26(14Q32.31) WILD-TYPE
  CLUS_1                             2                               6
  CLUS_2                            17                              15
  CLUS_3                            22                              87

Clustering(54) Variable = Del Peak 27(15q13.1) mutation analysis
D54V1, multiclass
D54V2, multiclass
        clus
vv       DEL PEAK 27(15Q13.1) MUTATED DEL PEAK 27(15Q13.1) WILD-TYPE
  CLUS_1                           22                             14
  CLUS_2                           17                             33
  CLUS_3                            9                             30
  CLUS_4                            6                             19
D54V3, multiclass
        clus
vv       DEL PEAK 27(15Q13.1) MUTATED DEL PEAK 27(15Q13.1) WILD-TYPE
  CLUS_1                            7                              4
  CLUS_2                            4                              6
  CLUS_3                            2                             12
  CLUS_4                            6                             10
D54V4, multiclass
        clus
vv       DEL PEAK 27(15Q13.1) MUTATED DEL PEAK 27(15Q13.1) WILD-TYPE
  CLUS_1                            5                              8
  CLUS_2                            7                              7
  CLUS_3                            7                             17
D54V5, multiclass
        clus
vv       DEL PEAK 27(15Q13.1) MUTATED DEL PEAK 27(15Q13.1) WILD-TYPE
  CLUS_1                           20                             30
  CLUS_2                           11                             22
  CLUS_3                           11                             27
D54V6, multiclass
        clus
vv       DEL PEAK 27(15Q13.1) MUTATED DEL PEAK 27(15Q13.1) WILD-TYPE
  CLUS_1                           12                             27
  CLUS_2                            6                             12
  CLUS_3                           24                             40
D54V7, multiclass
        clus
vv       DEL PEAK 27(15Q13.1) MUTATED DEL PEAK 27(15Q13.1) WILD-TYPE
  CLUS_1                           18                             17
  CLUS_2                           20                             48
  CLUS_3                           15                             31
D54V8, multiclass
        clus
vv       DEL PEAK 27(15Q13.1) MUTATED DEL PEAK 27(15Q13.1) WILD-TYPE
  CLUS_1                            4                              4
  CLUS_2                           17                             15
  CLUS_3                           32                             77

Clustering(55) Variable = Del Peak 28(16p13.3) mutation analysis
D55V1, multiclass
D55V2, multiclass
        clus
vv       DEL PEAK 28(16P13.3) MUTATED DEL PEAK 28(16P13.3) WILD-TYPE
  CLUS_1                           21                             15
  CLUS_2                           18                             32
  CLUS_3                            8                             31
  CLUS_4                            7                             18
D55V3, multiclass
        clus
vv       DEL PEAK 28(16P13.3) MUTATED DEL PEAK 28(16P13.3) WILD-TYPE
  CLUS_1                            6                              5
  CLUS_2                            5                              5
  CLUS_3                            4                             10
  CLUS_4                            3                             13
D55V4, multiclass
        clus
vv       DEL PEAK 28(16P13.3) MUTATED DEL PEAK 28(16P13.3) WILD-TYPE
  CLUS_1                            2                             11
  CLUS_2                            6                              8
  CLUS_3                           10                             14
D55V5, multiclass
        clus
vv       DEL PEAK 28(16P13.3) MUTATED DEL PEAK 28(16P13.3) WILD-TYPE
  CLUS_1                           19                             31
  CLUS_2                           12                             21
  CLUS_3                           14                             24
D55V6, multiclass
        clus
vv       DEL PEAK 28(16P13.3) MUTATED DEL PEAK 28(16P13.3) WILD-TYPE
  CLUS_1                           12                             27
  CLUS_2                            6                             12
  CLUS_3                           27                             37
D55V7, multiclass
        clus
vv       DEL PEAK 28(16P13.3) MUTATED DEL PEAK 28(16P13.3) WILD-TYPE
  CLUS_1                           13                             22
  CLUS_2                           27                             41
  CLUS_3                           14                             32
D55V8, multiclass
        clus
vv       DEL PEAK 28(16P13.3) MUTATED DEL PEAK 28(16P13.3) WILD-TYPE
  CLUS_1                            4                              4
  CLUS_2                           14                             18
  CLUS_3                           36                             73

Clustering(56) Variable = Del Peak 29(16q23.1) mutation analysis
D56V1, multiclass
D56V2, multiclass
        clus
vv       DEL PEAK 29(16Q23.1) MUTATED DEL PEAK 29(16Q23.1) WILD-TYPE
  CLUS_1                           15                             21
  CLUS_2                           13                             37
  CLUS_3                            7                             32
  CLUS_4                            3                             22
D56V3, multiclass
        clus
vv       DEL PEAK 29(16Q23.1) MUTATED DEL PEAK 29(16Q23.1) WILD-TYPE
  CLUS_1                            5                              6
  CLUS_2                            2                              8
  CLUS_3                            2                             12
  CLUS_4                            2                             14
D56V4, multiclass
        clus
vv       DEL PEAK 29(16Q23.1) MUTATED DEL PEAK 29(16Q23.1) WILD-TYPE
  CLUS_1                            2                             11
  CLUS_2                            4                             10
  CLUS_3                            5                             19
D56V5, multiclass
        clus
vv       DEL PEAK 29(16Q23.1) MUTATED DEL PEAK 29(16Q23.1) WILD-TYPE
  CLUS_1                           13                             37
  CLUS_2                            7                             26
  CLUS_3                           12                             26
D56V6, multiclass
        clus
vv       DEL PEAK 29(16Q23.1) MUTATED DEL PEAK 29(16Q23.1) WILD-TYPE
  CLUS_1                           11                             28
  CLUS_2                            4                             14
  CLUS_3                           17                             47
D56V7, multiclass
        clus
vv       DEL PEAK 29(16Q23.1) MUTATED DEL PEAK 29(16Q23.1) WILD-TYPE
  CLUS_1                           13                             22
  CLUS_2                           18                             50
  CLUS_3                            7                             39
D56V8, multiclass
        clus
vv       DEL PEAK 29(16Q23.1) MUTATED DEL PEAK 29(16Q23.1) WILD-TYPE
  CLUS_1                            2                              6
  CLUS_2                           13                             19
  CLUS_3                           23                             86

Clustering(57) Variable = Del Peak 30(17p12) mutation analysis
D57V1, multiclass
D57V2, multiclass
        clus
vv       DEL PEAK 30(17P12) MUTATED DEL PEAK 30(17P12) WILD-TYPE
  CLUS_1                         26                           10
  CLUS_2                         20                           30
  CLUS_3                         17                           22
  CLUS_4                         14                           11
D57V3, multiclass
        clus
vv       DEL PEAK 30(17P12) MUTATED DEL PEAK 30(17P12) WILD-TYPE
  CLUS_1                          7                            4
  CLUS_2                          4                            6
  CLUS_3                          9                            5
  CLUS_4                         11                            5
D57V4, multiclass
        clus
vv       DEL PEAK 30(17P12) MUTATED DEL PEAK 30(17P12) WILD-TYPE
  CLUS_1                          7                            6
  CLUS_2                          7                            7
  CLUS_3                         17                            7
D57V5, multiclass
        clus
vv       DEL PEAK 30(17P12) MUTATED DEL PEAK 30(17P12) WILD-TYPE
  CLUS_1                         32                           18
  CLUS_2                         11                           22
  CLUS_3                         18                           20
D57V6, multiclass
        clus
vv       DEL PEAK 30(17P12) MUTATED DEL PEAK 30(17P12) WILD-TYPE
  CLUS_1                         17                           22
  CLUS_2                          5                           13
  CLUS_3                         39                           25
D57V7, multiclass
        clus
vv       DEL PEAK 30(17P12) MUTATED DEL PEAK 30(17P12) WILD-TYPE
  CLUS_1                         21                           14
  CLUS_2                         36                           32
  CLUS_3                         19                           27
D57V8, multiclass
        clus
vv       DEL PEAK 30(17P12) MUTATED DEL PEAK 30(17P12) WILD-TYPE
  CLUS_1                          4                            4
  CLUS_2                         19                           13
  CLUS_3                         53                           56

Clustering(58) Variable = Del Peak 31(18q23) mutation analysis
D58V1, multiclass
D58V2, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                         19                           17
  CLUS_2                         18                           32
  CLUS_3                         16                           23
  CLUS_4                         10                           15
D58V3, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                          4                            7
  CLUS_2                          5                            5
  CLUS_3                          6                            8
  CLUS_4                          7                            9
D58V4, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                          6                            7
  CLUS_2                          7                            7
  CLUS_3                          9                           15
D58V5, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                         21                           29
  CLUS_2                         16                           17
  CLUS_3                         16                           22
D58V6, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                         18                           21
  CLUS_2                          5                           13
  CLUS_3                         30                           34
D58V7, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                         22                           13
  CLUS_2                         24                           44
  CLUS_3                         17                           29
D58V8, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                          7                            1
  CLUS_2                         18                           14
  CLUS_3                         38                           71

Clustering(59) Variable = Del Peak 32(19p13.3) mutation analysis
D59V1, multiclass
D59V2, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                           21                             15
  CLUS_2                           16                             34
  CLUS_3                           11                             28
  CLUS_4                           12                             13
D59V3, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                            4                              7
  CLUS_2                            4                              6
  CLUS_3                            6                              8
  CLUS_4                            6                             10
D59V4, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                            6                              7
  CLUS_2                            6                              8
  CLUS_3                            8                             16
D59V5, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                           20                             30
  CLUS_2                           12                             21
  CLUS_3                           15                             23
D59V6, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                           15                             24
  CLUS_2                            3                             15
  CLUS_3                           29                             35
D59V7, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                           17                             18
  CLUS_2                           24                             44
  CLUS_3                           18                             28
D59V8, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                            3                              5
  CLUS_2                           17                             15
  CLUS_3                           39                             70

Clustering(60) Variable = Del Peak 33(22q13.32) mutation analysis
D60V1, multiclass
D60V2, multiclass
        clus
vv       DEL PEAK 33(22Q13.32) MUTATED DEL PEAK 33(22Q13.32) WILD-TYPE
  CLUS_1                            18                              18
  CLUS_2                            22                              28
  CLUS_3                            13                              26
  CLUS_4                             7                              18
D60V3, multiclass
        clus
vv       DEL PEAK 33(22Q13.32) MUTATED DEL PEAK 33(22Q13.32) WILD-TYPE
  CLUS_1                             6                               5
  CLUS_2                             5                               5
  CLUS_3                             2                              12
  CLUS_4                             5                              11
D60V4, multiclass
        clus
vv       DEL PEAK 33(22Q13.32) MUTATED DEL PEAK 33(22Q13.32) WILD-TYPE
  CLUS_1                             5                               8
  CLUS_2                             8                               6
  CLUS_3                             5                              19
D60V5, multiclass
        clus
vv       DEL PEAK 33(22Q13.32) MUTATED DEL PEAK 33(22Q13.32) WILD-TYPE
  CLUS_1                            14                              36
  CLUS_2                            11                              22
  CLUS_3                            19                              19
D60V6, multiclass
        clus
vv       DEL PEAK 33(22Q13.32) MUTATED DEL PEAK 33(22Q13.32) WILD-TYPE
  CLUS_1                            19                              20
  CLUS_2                             4                              14
  CLUS_3                            21                              43
D60V7, multiclass
        clus
vv       DEL PEAK 33(22Q13.32) MUTATED DEL PEAK 33(22Q13.32) WILD-TYPE
  CLUS_1                            16                              19
  CLUS_2                            26                              42
  CLUS_3                            17                              29
D60V8, multiclass
        clus
vv       DEL PEAK 33(22Q13.32) MUTATED DEL PEAK 33(22Q13.32) WILD-TYPE
  CLUS_1                             5                               3
  CLUS_2                            15                              17
  CLUS_3                            39                              70

Clustering(61) Variable = Del Peak 34(Xp11.3) mutation analysis
D61V1, multiclass
D61V2, multiclass
        clus
vv       DEL PEAK 34(XP11.3) MUTATED DEL PEAK 34(XP11.3) WILD-TYPE
  CLUS_1                           5                            31
  CLUS_2                           9                            41
  CLUS_3                          19                            20
  CLUS_4                           6                            19
D61V3, multiclass
        clus
vv       DEL PEAK 34(XP11.3) MUTATED DEL PEAK 34(XP11.3) WILD-TYPE
  CLUS_1                           4                             7
  CLUS_2                           2                             8
  CLUS_3                           5                             9
  CLUS_4                           4                            12
D61V4, multiclass
        clus
vv       DEL PEAK 34(XP11.3) MUTATED DEL PEAK 34(XP11.3) WILD-TYPE
  CLUS_1                           3                            10
  CLUS_2                           4                            10
  CLUS_3                           8                            16
D61V5, multiclass
        clus
vv       DEL PEAK 34(XP11.3) MUTATED DEL PEAK 34(XP11.3) WILD-TYPE
  CLUS_1                          19                            31
  CLUS_2                           5                            28
  CLUS_3                          12                            26
D61V6, multiclass
        clus
vv       DEL PEAK 34(XP11.3) MUTATED DEL PEAK 34(XP11.3) WILD-TYPE
  CLUS_1                          10                            29
  CLUS_2                           3                            15
  CLUS_3                          23                            41
D61V7, multiclass
        clus
vv       DEL PEAK 34(XP11.3) MUTATED DEL PEAK 34(XP11.3) WILD-TYPE
  CLUS_1                           9                            26
  CLUS_2                          21                            47
  CLUS_3                           9                            37
D61V8, multiclass
        clus
vv       DEL PEAK 34(XP11.3) MUTATED DEL PEAK 34(XP11.3) WILD-TYPE
  CLUS_1                           2                             6
  CLUS_2                           9                            23
  CLUS_3                          28                            81

Clustering(62) Variable = Del Peak 35(Xq21.33) mutation analysis
D62V1, multiclass
D62V2, multiclass
        clus
vv       DEL PEAK 35(XQ21.33) MUTATED DEL PEAK 35(XQ21.33) WILD-TYPE
  CLUS_1                            8                             28
  CLUS_2                            8                             42
  CLUS_3                           15                             24
  CLUS_4                            4                             21
D62V3, multiclass
        clus
vv       DEL PEAK 35(XQ21.33) MUTATED DEL PEAK 35(XQ21.33) WILD-TYPE
  CLUS_1                            3                              8
  CLUS_2                            0                             10
  CLUS_3                            4                             10
  CLUS_4                            6                             10
D62V4, multiclass
        clus
vv       DEL PEAK 35(XQ21.33) MUTATED DEL PEAK 35(XQ21.33) WILD-TYPE
  CLUS_1                            6                              7
  CLUS_2                            3                             11
  CLUS_3                            4                             20
D62V5, multiclass
        clus
vv       DEL PEAK 35(XQ21.33) MUTATED DEL PEAK 35(XQ21.33) WILD-TYPE
  CLUS_1                           14                             36
  CLUS_2                            2                             31
  CLUS_3                           13                             25
D62V6, multiclass
        clus
vv       DEL PEAK 35(XQ21.33) MUTATED DEL PEAK 35(XQ21.33) WILD-TYPE
  CLUS_1                           11                             28
  CLUS_2                            4                             14
  CLUS_3                           14                             50
D62V7, multiclass
        clus
vv       DEL PEAK 35(XQ21.33) MUTATED DEL PEAK 35(XQ21.33) WILD-TYPE
  CLUS_1                           11                             24
  CLUS_2                           17                             51
  CLUS_3                            7                             39
D62V8, multiclass
        clus
vv       DEL PEAK 35(XQ21.33) MUTATED DEL PEAK 35(XQ21.33) WILD-TYPE
  CLUS_1                            2                              6
  CLUS_2                           11                             21
  CLUS_3                           22                             87

Clustering(63) Variable = Del Peak 36(Xq22.3) mutation analysis
D63V1, multiclass
D63V2, multiclass
        clus
vv       DEL PEAK 36(XQ22.3) MUTATED DEL PEAK 36(XQ22.3) WILD-TYPE
  CLUS_1                           8                            28
  CLUS_2                           6                            44
  CLUS_3                          15                            24
  CLUS_4                           3                            22
D63V3, multiclass
        clus
vv       DEL PEAK 36(XQ22.3) MUTATED DEL PEAK 36(XQ22.3) WILD-TYPE
  CLUS_1                           4                             7
  CLUS_2                           0                            10
  CLUS_3                           5                             9
  CLUS_4                           5                            11
D63V4, multiclass
        clus
vv       DEL PEAK 36(XQ22.3) MUTATED DEL PEAK 36(XQ22.3) WILD-TYPE
  CLUS_1                           5                             8
  CLUS_2                           4                            10
  CLUS_3                           5                            19
D63V5, multiclass
        clus
vv       DEL PEAK 36(XQ22.3) MUTATED DEL PEAK 36(XQ22.3) WILD-TYPE
  CLUS_1                          13                            37
  CLUS_2                           2                            31
  CLUS_3                          12                            26
D63V6, multiclass
        clus
vv       DEL PEAK 36(XQ22.3) MUTATED DEL PEAK 36(XQ22.3) WILD-TYPE
  CLUS_1                          10                            29
  CLUS_2                           3                            15
  CLUS_3                          14                            50
D63V7, multiclass
        clus
vv       DEL PEAK 36(XQ22.3) MUTATED DEL PEAK 36(XQ22.3) WILD-TYPE
  CLUS_1                          10                            25
  CLUS_2                          17                            51
  CLUS_3                           5                            41
D63V8, multiclass
        clus
vv       DEL PEAK 36(XQ22.3) MUTATED DEL PEAK 36(XQ22.3) WILD-TYPE
  CLUS_1                           1                             7
  CLUS_2                          10                            22
  CLUS_3                          21                            88
                     V1                      V2                      V3 
              "CN_CNMF"      "METHLYATION_CNMF"             "RPPA_CNMF" 
                     V4                      V5                      V6 
   "RPPA_CHIERARCHICAL"          "MRNASEQ_CNMF" "MRNASEQ_CHIERARCHICAL" 
                     V7                      V8 
          "MIRSEQ_CNMF"  "MIRSEQ_CHIERARCHICAL" 
> q(save="no")
