		Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		HISTOLOGICAL.TYPE		PATHOLOGY.T		PATHOLOGY.N		PATHOLOGICSPREAD(M)		TUMOR.STAGE		RADIATIONS.RADIATION.REGIMENINDICATION		NUMBERPACKYEARSSMOKED		TOBACCOSMOKINGHISTORYINDICATOR		YEAROFTOBACCOSMOKINGONSET		COMPLETENESS.OF.RESECTION	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	23 (7%)	302	0.85751	1	0.85316	1	0.048911	1	NA	NA	2.8817e-08	3.14e-05	0.037874	1	1	1	0.032129	1	0.017023	1	0.55982	1	0.56637	1	0.36753	1	0.4155	1	0.60227	1
1q gain	69 (21%)	256	0.3862	1	0.46815	1	0.87782	1	0.3579	1	0.0045343	1	0.18233	1	0.83158	1	0.2669	1	0.45226	1	1	1	0.2586	1	1	1	0.52005	1	0.55753	1
2p gain	76 (23%)	249	0.51454	1	0.87499	1	0.070594	1	0.12597	1	0.010599	1	0.12476	1	0.13991	1	0.17264	1	0.10348	1	0.13737	1	0.020969	1	0.72581	1	0.020079	1	0.78925	1
2q gain	36 (11%)	289	0.19825	1	0.4738	1	0.42491	1	0.9034	1	8.5758e-05	0.0926	0.20757	1	0.48569	1	0.168	1	0.0029888	1	0.11049	1	0.13007	1	0.93793	1	0.29535	1	1	1
3p gain	34 (10%)	291	0.49515	1	0.12745	1	0.060866	1	0.19686	1	0.97729	1	0.040251	1	0.79624	1	0.49842	1	0.51953	1	1	1	0.35598	1	0.068803	1	0.056065	1	0.79128	1
3q gain	147 (45%)	178	0.87578	1	0.21147	1	0.89914	1	0.24754	1	0.35216	1	0.37327	1	0.87074	1	0.43738	1	0.66916	1	0.55351	1	0.77082	1	0.041654	1	0.024638	1	0.87772	1
4p gain	14 (4%)	311	0.33008	1	0.63565	1	0.024769	1	0.7119	1	0.7632	1	0.13091	1	1	1	0.69225	1	0.63184	1	1	1	0.35385	1	0.75761	1	0.40403	1	0.19873	1
4q gain	6 (2%)	319	0.92199	1	0.14034	1	0.34396	1	NA	NA	0.18818	1	0.30634	1	0.66324	1	1	1	0.26567	1	1	1	0.15354	1	0.12195	1	NA	NA	1	1
5p gain	152 (47%)	173	0.41129	1	0.071583	1	0.52456	1	0.80926	1	0.3277	1	0.037576	1	0.38223	1	0.62985	1	0.6709	1	1	1	0.48884	1	0.041205	1	0.81477	1	0.019252	1
5q gain	34 (10%)	291	0.86196	1	0.28595	1	0.8387	1	0.4533	1	0.97729	1	0.93285	1	0.42739	1	1	1	0.59779	1	0.32259	1	0.90564	1	0.63776	1	0.29491	1	0.79128	1
6p gain	31 (10%)	294	0.88518	1	0.32654	1	1	1	0.28646	1	0.033734	1	0.1107	1	0.65745	1	0.39524	1	0.12315	1	0.28264	1	0.41566	1	0.60305	1	0.012951	1	0.20329	1
6q gain	18 (6%)	307	0.63807	1	0.42955	1	1	1	0.4632	1	0.0014803	1	0.64623	1	1	1	0.75032	1	0.95878	1	0.47107	1	0.28758	1	0.71025	1	0.18624	1	0.12486	1
7p gain	90 (28%)	235	0.22832	1	0.15799	1	0.47754	1	0.80747	1	0.37897	1	0.0039268	1	0.74156	1	0.32567	1	0.44825	1	0.73367	1	0.060506	1	0.42656	1	0.35457	1	0.50037	1
7q gain	85 (26%)	240	0.50024	1	0.39329	1	0.31359	1	0.35508	1	0.46949	1	0.0091373	1	0.72083	1	0.11992	1	0.32325	1	0.73434	1	0.77159	1	0.78582	1	0.51951	1	0.45806	1
8p gain	45 (14%)	280	0.88691	1	0.25495	1	0.85491	1	0.0063787	1	0.095864	1	0.59828	1	0.40423	1	0.031218	1	0.19102	1	0.18421	1	0.6771	1	0.70831	1	0.61515	1	0.29082	1
8q gain	95 (29%)	230	0.32335	1	0.30087	1	0.78078	1	0.20916	1	0.86918	1	0.20861	1	0.71463	1	0.037708	1	0.094339	1	0.30943	1	0.28365	1	0.27275	1	0.26247	1	0.19017	1
9p gain	19 (6%)	306	0.21401	1	0.71987	1	0.27852	1	NA	NA	0.0012662	1	0.5323	1	0.70424	1	1	1	0.79464	1	1	1	0.92763	1	0.87895	1	0.88244	1	0.52525	1
9q gain	28 (9%)	297	0.19752	1	0.40237	1	0.65706	1	0.53685	1	0.42307	1	0.38242	1	0.83704	1	0.17711	1	0.72485	1	0.60809	1	0.66642	1	0.61921	1	0.73955	1	1	1
10p gain	17 (5%)	308	0.98144	1	0.74609	1	1	1	0.93626	1	0.9664	1	0.57001	1	0.06926	1	0.23088	1	0.029984	1	0.45148	1	0.17869	1	0.23536	1	0.327	1	0.22335	1
10q gain	7 (2%)	318	0.57114	1	0.69931	1	1	1	NA	NA	0.99402	1	0.38686	1	0.41942	1	1	1	0.32742	1	0.21598	1	0.58154	1	0.047082	1	0.77094	1	1	1
11p gain	20 (6%)	305	0.90161	1	0.31974	1	0.4262	1	1.9981e-06	0.00217	0.95419	1	0.012278	1	0.32404	1	1	1	0.51557	1	0.50835	1	0.1481	1	0.85116	1	0.54105	1	0.78524	1
11q gain	22 (7%)	303	0.73497	1	0.58836	1	0.21634	1	0.52069	1	0.93166	1	0.051249	1	0.21679	1	0.77612	1	0.12298	1	0.54323	1	0.56156	1	0.47827	1	0.98652	1	1	1
12p gain	90 (28%)	235	0.86765	1	0.93873	1	0.0043735	1	0.077351	1	0.88447	1	0.14907	1	0.80415	1	0.86176	1	0.90261	1	0.50467	1	0.96494	1	0.40382	1	0.40419	1	0.69775	1
12q gain	41 (13%)	284	0.5694	1	0.87214	1	0.012242	1	0.37758	1	0.97793	1	0.27492	1	0.089134	1	0.30387	1	0.2015	1	0.63579	1	0.47991	1	0.3433	1	0.98683	1	0.61011	1
13q gain	8 (2%)	317	0.27526	1	0.93745	1	0.68489	1	NA	NA	0.99223	1	0.26335	1	1	1	0.25167	1	0.6705	1	1	1	0.56564	1	0.12347	1	0.68135	1	1	1
14q gain	31 (10%)	294	0.030755	1	0.064363	1	0.82984	1	0.85798	1	0.97358	1	0.49194	1	0.33827	1	0.55198	1	0.75586	1	1	1	0.61237	1	0.24544	1	0.75233	1	0.38248	1
15q gain	30 (9%)	295	0.67992	1	0.96988	1	1	1	0.38928	1	0.48182	1	0.64192	1	0.41242	1	0.83351	1	0.7447	1	1	1	0.44717	1	0.023699	1	0.36522	1	0.4989	1
16p gain	15 (5%)	310	0.7785	1	0.3108	1	0.37074	1	0.068098	1	0.79923	1	0.015622	1	0.67812	1	1	1	0.61022	1	1	1	0.80567	1	0.43685	1	0.12113	1	1	1
16q gain	19 (6%)	306	0.85637	1	0.10861	1	0.17486	1	0.36575	1	0.95844	1	0.0040728	1	0.22815	1	0.29211	1	0.15327	1	1	1	0.94034	1	0.92205	1	0.01249	1	0.80223	1
17p gain	9 (3%)	316	0.34613	1	0.83903	1	0.11844	1	NA	NA	3.7919e-07	0.000412	0.55011	1	0.41862	1	0.29362	1	0.095	1	1	1	0.9482	1	0.14258	1	0.02319	1	0.49974	1
17q gain	35 (11%)	290	0.70397	1	0.3826	1	0.042069	1	0.1205	1	0.60942	1	0.47715	1	0.020607	1	0.168	1	0.050512	1	0.33588	1	0.79118	1	0.56695	1	0.055767	1	0.064066	1
18p gain	54 (17%)	271	0.32868	1	0.14869	1	0.2332	1	0.19769	1	0.85752	1	0.33073	1	0.033649	1	0.071365	1	0.26782	1	1	1	0.64175	1	0.15812	1	0.64603	1	0.60736	1
18q gain	39 (12%)	286	0.64829	1	0.24773	1	0.6972	1	0.37758	1	0.69013	1	0.45173	1	0.32864	1	0.28296	1	0.92511	1	0.62795	1	0.16265	1	0.69585	1	0.24245	1	0.91384	1
19p gain	33 (10%)	292	0.43778	1	0.22697	1	0.67541	1	1.7696e-06	0.00192	5.6313e-06	0.0061	0.63371	1	0.37765	1	0.56639	1	0.63024	1	0.30928	1	0.59171	1	0.65633	1	0.83014	1	0.88969	1
19q gain	46 (14%)	279	0.66717	1	0.82024	1	1	1	0.13881	1	0.00056485	0.609	0.85435	1	0.11229	1	0.07475	1	0.05744	1	0.65887	1	0.87866	1	0.86315	1	0.16175	1	0.86023	1
20p gain	91 (28%)	234	0.76505	1	0.063715	1	0.02305	1	0.27865	1	0.17288	1	0.94187	1	0.62227	1	0.040791	1	0.1525	1	0.18993	1	0.74053	1	0.77885	1	0.19833	1	0.29744	1
20q gain	80 (25%)	245	0.67304	1	0.26554	1	0.13933	1	0.76985	1	0.098514	1	0.96998	1	0.50068	1	0.080523	1	0.12965	1	0.14701	1	0.65813	1	0.66099	1	0.57164	1	0.25296	1
21q gain	18 (6%)	307	0.26823	1	0.68199	1	1	1	0.94869	1	5.9588e-05	0.0645	0.23861	1	0.24863	1	0.72039	1	0.19145	1	0.47107	1	0.86516	1	0.48784	1	0.63058	1	0.093678	1
22q gain	77 (24%)	248	0.082608	1	0.36096	1	0.45838	1	0.7815	1	0.90583	1	0.20393	1	0.53007	1	1	1	0.11297	1	0.72613	1	0.93833	1	0.32832	1	0.60437	1	0.37168	1
Xq gain	9 (3%)	316	0.88142	1	0.28663	1	1	1	0.89065	1	0.99021	1	0.48348	1	0.8905	1	0.64229	1	0.6945	1	1	1	0.56306	1	1	1	0.96441	1	1	1
1p loss	48 (15%)	277	0.62238	1	0.79337	1	0.0020956	1	0.44976	1	0.11916	1	0.40011	1	0.33269	1	0.35928	1	0.19541	1	0.21172	1	0.59204	1	0.66425	1	0.54594	1	0.57397	1
1q loss	7 (2%)	318	0.77497	1	0.021441	1	0.6829	1	NA	NA	0.99402	1	0.29433	1	0.41942	1	0.54927	1	0.16502	1	0.21598	1	0.25693	1	0.53919	1	0.18717	1	0.11924	1
2q loss	8 (2%)	317	0.078441	1	0.14822	1	1	1	NA	NA	0.99223	1	0.60726	1	1	1	1	1	1	1	1	1	0.11193	1	0.03531	1	0.73132	1	1	1
3p loss	141 (43%)	184	0.88478	1	0.34509	1	0.79903	1	0.13798	1	0.40559	1	0.96094	1	0.91595	1	0.70132	1	0.96677	1	0.54138	1	0.55717	1	0.59252	1	0.39625	1	0.93566	1
3q loss	24 (7%)	301	0.095497	1	0.33625	1	0.808	1	0.65012	1	0.010062	1	0.48779	1	0.037404	1	0.30698	1	0.091379	1	1	1	0.10736	1	0.86365	1	0.053625	1	0.041496	1
4p loss	138 (42%)	187	0.10815	1	0.86304	1	1	1	0.27093	1	0.40578	1	0.35602	1	0.3185	1	0.24834	1	0.056774	1	1	1	0.56725	1	0.86976	1	0.293	1	0.66042	1
4q loss	119 (37%)	206	0.075909	1	0.50695	1	0.14803	1	0.13836	1	0.23539	1	0.52458	1	0.8909	1	0.32201	1	0.25633	1	0.53923	1	0.56934	1	0.62421	1	0.68479	1	0.8679	1
5p loss	22 (7%)	303	0.08763	1	0.23847	1	0.61261	1	0.49071	1	0.0060381	1	0.3176	1	0.35991	1	0.3357	1	0.87857	1	0.16597	1	0.99184	1	0.59617	1	0.17408	1	0.19011	1
5q loss	117 (36%)	208	0.26092	1	0.72306	1	0.69148	1	0.68351	1	0.23489	1	0.020681	1	0.24502	1	0.55789	1	0.037929	1	0.53334	1	0.55525	1	0.25294	1	0.022066	1	0.23073	1
6p loss	33 (10%)	292	0.92225	1	0.43979	1	0.089718	1	0.81777	1	0.018787	1	0.077454	1	0.2543	1	0.70089	1	0.13821	1	0.61127	1	0.82053	1	0.54218	1	0.92327	1	0.2767	1
6q loss	34 (10%)	291	0.54999	1	0.6469	1	0.8387	1	0.78876	1	0.022679	1	0.029376	1	0.56935	1	0.7123	1	0.18194	1	0.6132	1	0.25927	1	0.62398	1	0.28262	1	0.11411	1
7p loss	20 (6%)	305	0.73855	1	0.46724	1	0.79159	1	0.79553	1	0.95419	1	0.29422	1	0.21383	1	1	1	0.54684	1	0.50835	1	0.10311	1	0.42131	1	0.39421	1	0.047719	1
7q loss	10 (3%)	315	0.48542	1	0.81816	1	0.46191	1	NA	NA	0.98797	1	0.12365	1	0.42309	1	1	1	0.92335	1	0.2948	1	0.16455	1	0.38647	1	0.59585	1	0.23028	1
8p loss	95 (29%)	230	0.38242	1	0.098266	1	0.57765	1	0.51878	1	0.86918	1	0.13368	1	0.69219	1	0.36025	1	0.63403	1	0.18578	1	0.053144	1	0.036627	1	0.35045	1	0.84344	1
8q loss	9 (3%)	316	0.84896	1	0.86266	1	0.45684	1	0.4632	1	0.46356	1	0.51624	1	0.6917	1	1	1	0.54203	1	1	1	0.80102	1	0.40536	1	0.047635	1	0.54756	1
9p loss	134 (41%)	191	0.76312	1	0.37414	1	0.43979	1	0.30009	1	0.40391	1	0.85387	1	0.48246	1	0.65367	1	0.75229	1	0.76567	1	0.10762	1	0.7356	1	0.31208	1	0.29151	1
9q loss	84 (26%)	241	0.92757	1	0.0044207	1	0.77174	1	0.76794	1	0.15997	1	0.20415	1	0.71254	1	0.1726	1	0.71694	1	1	1	0.66297	1	0.60891	1	0.071432	1	0.59338	1
10p loss	71 (22%)	254	0.43064	1	0.59207	1	0.22177	1	0.96319	1	0.36265	1	0.79653	1	0.32687	1	0.44108	1	0.32705	1	0.13031	1	0.92865	1	0.42115	1	0.55641	1	0.60468	1
10q loss	70 (22%)	255	0.37805	1	0.99838	1	0.8775	1	0.83239	1	0.35333	1	0.97999	1	0.87659	1	0.21075	1	0.33889	1	0.12959	1	0.18558	1	0.73361	1	0.079694	1	0.58218	1
11p loss	47 (14%)	278	0.40634	1	0.60873	1	0.85682	1	0.71223	1	0.18048	1	0.67393	1	0.43102	1	0.40427	1	0.84566	1	0.20241	1	0.35782	1	0.54826	1	0.96315	1	0.71543	1
11q loss	28 (9%)	297	0.62615	1	0.13046	1	0.49598	1	0.96339	1	0.91391	1	0.51062	1	0.079591	1	0.81188	1	0.48485	1	0.24291	1	0.88318	1	0.80251	1	0.93733	1	0.31892	1
12p loss	4 (1%)	321	0.50974	1	0.014513	1	0.27022	1	NA	NA	1.3235e-16	1.44e-13	0.53234	1	1	1	0.36433	1	0.54892	1	1	1	NA	NA	0.25602	1	0.33906	1	1	1
12q loss	4 (1%)	321	0.8638	1	0.18489	1	0.27022	1	NA	NA	1.3235e-16	1.44e-13	0.18507	1	0.54253	1	0.36433	1	0.34958	1	1	1	NA	NA	0.19538	1	0.32651	1	1	1
13q loss	122 (38%)	203	0.032407	1	0.48477	1	0.69379	1	0.074447	1	0.33998	1	0.9582	1	0.11559	1	0.41748	1	0.015417	1	0.75281	1	0.72718	1	0.26144	1	0.0073409	1	0.68606	1
14q loss	60 (18%)	265	0.19503	1	0.21097	1	0.071892	1	0.22732	1	0.16672	1	0.019306	1	0.1586	1	0.43348	1	0.43434	1	0.43265	1	0.75832	1	0.42701	1	0.19035	1	0.90383	1
15q loss	38 (12%)	287	0.68482	1	0.44468	1	0.046937	1	0.83603	1	0.067795	1	0.030951	1	0.22285	1	0.46163	1	0.053227	1	1	1	0.44691	1	0.13452	1	0.83369	1	0.50583	1
16p loss	48 (15%)	277	0.18803	1	0.75422	1	0.85785	1	0.4533	1	0.7747	1	0.74984	1	0.56086	1	0.78891	1	0.91379	1	1	1	0.31884	1	0.93112	1	0.68431	1	0.86465	1
16q loss	60 (18%)	265	0.1332	1	0.16365	1	0.14074	1	1.7696e-06	0.00192	0.67422	1	0.79999	1	0.4344	1	0.13793	1	0.79193	1	0.43265	1	0.075458	1	0.29919	1	0.58968	1	0.25103	1
17p loss	115 (35%)	210	0.20303	1	0.87475	1	0.35351	1	0.013488	1	0.54202	1	0.34643	1	0.19582	1	0.31514	1	0.94201	1	0.52812	1	0.36146	1	0.27971	1	0.75892	1	0.94835	1
17q loss	19 (6%)	306	0.79112	1	0.75951	1	0.03172	1	0.4533	1	0.95844	1	0.47275	1	0.74043	1	0.11739	1	0.29558	1	0.49002	1	0.33154	1	0.51552	1	0.13619	1	0.051024	1
18p loss	33 (10%)	292	0.59883	1	0.37835	1	0.67541	1	0.7527	1	0.88366	1	0.95249	1	0.39247	1	0.27011	1	0.34485	1	0.61127	1	0.093596	1	0.87102	1	0.22992	1	0.5988	1
18q loss	63 (19%)	262	0.35142	1	0.11489	1	0.20263	1	0.96319	1	0.31324	1	0.48196	1	0.80199	1	0.22418	1	0.90507	1	0.69796	1	0.21867	1	0.31866	1	0.2895	1	0.41214	1
19p loss	53 (16%)	272	0.071551	1	0.81827	1	0.86445	1	0.11795	1	0.14154	1	0.37738	1	0.095426	1	0.15805	1	0.17246	1	0.020384	1	0.96074	1	0.14592	1	0.11078	1	0.41064	1
19q loss	36 (11%)	289	0.57155	1	0.19745	1	0.83945	1	0.25981	1	0.0018669	1	0.56603	1	0.24846	1	0.59507	1	0.88237	1	0.11049	1	0.1564	1	0.26137	1	0.034969	1	0.0085966	1
20p loss	16 (5%)	309	0.060001	1	0.86781	1	1	1	NA	NA	0.97008	1	0.38678	1	0.52409	1	0.72039	1	0.066268	1	1	1	0.90946	1	0.79526	1	0.70501	1	0.72784	1
20q loss	17 (5%)	308	0.37598	1	0.90724	1	0.57516	1	NA	NA	0.9664	1	0.94495	1	0.40629	1	0.73527	1	0.83891	1	1	1	0.11962	1	0.89003	1	0.17754	1	0.19011	1
21q loss	99 (30%)	226	0.45378	1	0.31419	1	0.012506	1	0.56362	1	0.52966	1	0.50355	1	0.71883	1	0.2902	1	0.10045	1	0.74109	1	0.25257	1	0.94463	1	0.37408	1	0.7285	1
22q loss	33 (10%)	292	0.64801	1	0.12607	1	0.060463	1	0.32705	1	0.0011915	1	0.23478	1	0.0004219	0.455	0.28196	1	0.0029199	1	1	1	0.71452	1	0.40233	1	0.083572	1	0.18417	1
Xq loss	13 (4%)	312	0.8842	1	0.28373	1	0.32904	1	0.94869	1	6.6256e-05	0.0716	0.72876	1	0.15019	1	1	1	0.44914	1	1	1	0.68143	1	1	1	0.78798	1	1	1
