
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/376247/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/LUSC-TP/2909314/1.GDAC_mergedClustering.Finished/LUSC-TP.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=LUSC-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=LUSC-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=399, in cluster file=397, common to both=397
[1]  84 397
[1] "Amp Peak  1(1p34.2) mutation analysis"
[1] 3
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           63                           334 
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           63                           334 
[1] "Amp Peak  2(1q21.2) mutation analysis"
[1] 3
  AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE 
                          205                           192 
  AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE 
                          205                           192 
[1] "Amp Peak  3(2p16.1) mutation analysis"
[1] 3
  AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE 
                          216                           181 
  AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE 
                          216                           181 
[1] "Amp Peak  4(2q31.2) mutation analysis"
[1] 3
  AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE 
                          132                           265 
  AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE 
                          132                           265 
[1] "Amp Peak  5(3p11.1) mutation analysis"
[1] 3
  AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE 
                           80                           317 
  AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE 
                           80                           317 
[1] "Amp Peak  6(3q26.33) mutation analysis"
[1] 3
  AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE 
                           364                             33 
  AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE 
                           364                             33 
[1] "Amp Peak  7(4q12) mutation analysis"
[1] 3
  AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE 
                         93                         304 
  AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE 
                         93                         304 
[1] "Amp Peak  8(5p15.33) mutation analysis"
[1] 3
  AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE 
                           314                             83 
  AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE 
                           314                             83 
[1] "Amp Peak  9(5p12) mutation analysis"
[1] 3
  AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE 
                        261                         136 
  AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE 
                        261                         136 
[1] "Amp Peak 10(6p12.1) mutation analysis"
[1] 3
  AMP PEAK 10(6P12.1) MUTATED AMP PEAK 10(6P12.1) WILD-TYPE 
                          130                           267 
  AMP PEAK 10(6P12.1) MUTATED AMP PEAK 10(6P12.1) WILD-TYPE 
                          130                           267 
[1] "Amp Peak 11(6q12) mutation analysis"
[1] 3
  AMP PEAK 11(6Q12) MUTATED AMP PEAK 11(6Q12) WILD-TYPE 
                        117                         280 
  AMP PEAK 11(6Q12) MUTATED AMP PEAK 11(6Q12) WILD-TYPE 
                        117                         280 
[1] "Amp Peak 12(7p11.2) mutation analysis"
[1] 3
  AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE 
                          193                           204 
  AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE 
                          193                           204 
[1] "Amp Peak 13(7q21.2) mutation analysis"
[1] 3
  AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE 
                          209                           188 
  AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE 
                          209                           188 
[1] "Amp Peak 14(8p11.23) mutation analysis"
[1] 3
  AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE 
                           184                            213 
  AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE 
                           184                            213 
[1] "Amp Peak 15(8q24.21) mutation analysis"
[1] 3
  AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE 
                           280                            117 
  AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE 
                           280                            117 
[1] "Amp Peak 16(9p24.1) mutation analysis"
[1] 3
  AMP PEAK 16(9P24.1) MUTATED AMP PEAK 16(9P24.1) WILD-TYPE 
                           73                           324 
  AMP PEAK 16(9P24.1) MUTATED AMP PEAK 16(9P24.1) WILD-TYPE 
                           73                           324 
[1] "Amp Peak 17(9p13.3) mutation analysis"
[1] 3
  AMP PEAK 17(9P13.3) MUTATED AMP PEAK 17(9P13.3) WILD-TYPE 
                          109                           288 
  AMP PEAK 17(9P13.3) MUTATED AMP PEAK 17(9P13.3) WILD-TYPE 
                          109                           288 
[1] "Amp Peak 18(11q13.3) mutation analysis"
[1] 3
  AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE 
                           143                            254 
  AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE 
                           143                            254 
[1] "Amp Peak 19(12p13.33) mutation analysis"
[1] 3
  AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE 
                            198                             199 
  AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE 
                            198                             199 
[1] "Amp Peak 20(12q15) mutation analysis"
[1] 3
  AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE 
                         144                          253 
  AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE 
                         144                          253 
[1] "Amp Peak 21(13q34) mutation analysis"
[1] 3
  AMP PEAK 21(13Q34) MUTATED AMP PEAK 21(13Q34) WILD-TYPE 
                          71                          326 
  AMP PEAK 21(13Q34) MUTATED AMP PEAK 21(13Q34) WILD-TYPE 
                          71                          326 
[1] "Amp Peak 22(14q13.3) mutation analysis"
[1] 3
  AMP PEAK 22(14Q13.3) MUTATED AMP PEAK 22(14Q13.3) WILD-TYPE 
                           121                            276 
  AMP PEAK 22(14Q13.3) MUTATED AMP PEAK 22(14Q13.3) WILD-TYPE 
                           121                            276 
[1] "Amp Peak 23(15q26.3) mutation analysis"
[1] 3
  AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE 
                           139                            258 
  AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE 
                           139                            258 
[1] "Amp Peak 24(17q25.1) mutation analysis"
[1] 3
  AMP PEAK 24(17Q25.1) MUTATED AMP PEAK 24(17Q25.1) WILD-TYPE 
                           191                            206 
  AMP PEAK 24(17Q25.1) MUTATED AMP PEAK 24(17Q25.1) WILD-TYPE 
                           191                            206 
[1] "Amp Peak 25(18p11.32) mutation analysis"
[1] 3
  AMP PEAK 25(18P11.32) MUTATED AMP PEAK 25(18P11.32) WILD-TYPE 
                            137                             260 
  AMP PEAK 25(18P11.32) MUTATED AMP PEAK 25(18P11.32) WILD-TYPE 
                            137                             260 
[1] "Amp Peak 26(18q11.2) mutation analysis"
[1] 3
  AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE 
                           126                            271 
  AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE 
                           126                            271 
[1] "Amp Peak 27(19q12) mutation analysis"
[1] 3
  AMP PEAK 27(19Q12) MUTATED AMP PEAK 27(19Q12) WILD-TYPE 
                         167                          230 
  AMP PEAK 27(19Q12) MUTATED AMP PEAK 27(19Q12) WILD-TYPE 
                         167                          230 
[1] "Amp Peak 28(19q13.2) mutation analysis"
[1] 3
  AMP PEAK 28(19Q13.2) MUTATED AMP PEAK 28(19Q13.2) WILD-TYPE 
                           170                            227 
  AMP PEAK 28(19Q13.2) MUTATED AMP PEAK 28(19Q13.2) WILD-TYPE 
                           170                            227 
[1] "Amp Peak 29(20p12.2) mutation analysis"
[1] 3
  AMP PEAK 29(20P12.2) MUTATED AMP PEAK 29(20P12.2) WILD-TYPE 
                           211                            186 
  AMP PEAK 29(20P12.2) MUTATED AMP PEAK 29(20P12.2) WILD-TYPE 
                           211                            186 
[1] "Amp Peak 30(20q11.21) mutation analysis"
[1] 3
  AMP PEAK 30(20Q11.21) MUTATED AMP PEAK 30(20Q11.21) WILD-TYPE 
                            229                             168 
  AMP PEAK 30(20Q11.21) MUTATED AMP PEAK 30(20Q11.21) WILD-TYPE 
                            229                             168 
[1] "Amp Peak 31(22q11.21) mutation analysis"
[1] 3
  AMP PEAK 31(22Q11.21) MUTATED AMP PEAK 31(22Q11.21) WILD-TYPE 
                            199                             198 
  AMP PEAK 31(22Q11.21) MUTATED AMP PEAK 31(22Q11.21) WILD-TYPE 
                            199                             198 
[1] "Amp Peak 32(Xq28) mutation analysis"
[1] 3
  AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE 
                        106                         291 
  AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE 
                        106                         291 
[1] "Del Peak  1(1p36.22) mutation analysis"
[1] 3
  DEL PEAK  1(1P36.22) MUTATED DEL PEAK  1(1P36.22) WILD-TYPE 
                           172                            225 
  DEL PEAK  1(1P36.22) MUTATED DEL PEAK  1(1P36.22) WILD-TYPE 
                           172                            225 
[1] "Del Peak  2(1p13.2) mutation analysis"
[1] 3
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                          172                           225 
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                          172                           225 
[1] "Del Peak  3(2p25.3) mutation analysis"
[1] 3
  DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE 
                           37                           360 
  DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE 
                           37                           360 
[1] "Del Peak  4(2q22.1) mutation analysis"
[1] 3
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                          105                           292 
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                          105                           292 
[1] "Del Peak  5(2q36.2) mutation analysis"
[1] 3
  DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE 
                          132                           265 
  DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE 
                          132                           265 
[1] "Del Peak  6(3p25.3) mutation analysis"
[1] 3
  DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE 
                          313                            84 
  DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE 
                          313                            84 
[1] "Del Peak  7(3p13) mutation analysis"
[1] 3
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                        340                          57 
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                        340                          57 
[1] "Del Peak  8(3p12.3) mutation analysis"
[1] 3
  DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE 
                          332                            65 
  DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE 
                          332                            65 
[1] "Del Peak  9(3q11.1) mutation analysis"
[1] 3
  DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE 
                           59                           338 
  DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE 
                           59                           338 
[1] "Del Peak 10(4p15.2) mutation analysis"
[1] 3
  DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE 
                          239                           158 
  DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE 
                          239                           158 
[1] "Del Peak 11(4q22.1) mutation analysis"
[1] 3
  DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE 
                          217                           180 
  DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE 
                          217                           180 
[1] "Del Peak 12(4q32.3) mutation analysis"
[1] 3
  DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE 
                          248                           149 
  DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE 
                          248                           149 
[1] "Del Peak 13(4q35.2) mutation analysis"
[1] 3
  DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE 
                          253                           144 
  DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE 
                          253                           144 
[1] "Del Peak 14(5q11.2) mutation analysis"
[1] 3
  DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE 
                          290                           107 
  DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE 
                          290                           107 
[1] "Del Peak 15(5q31.1) mutation analysis"
[1] 3
  DEL PEAK 15(5Q31.1) MUTATED DEL PEAK 15(5Q31.1) WILD-TYPE 
                          308                            89 
  DEL PEAK 15(5Q31.1) MUTATED DEL PEAK 15(5Q31.1) WILD-TYPE 
                          308                            89 
[1] "Del Peak 16(6p25.3) mutation analysis"
[1] 3
  DEL PEAK 16(6P25.3) MUTATED DEL PEAK 16(6P25.3) WILD-TYPE 
                          100                           297 
  DEL PEAK 16(6P25.3) MUTATED DEL PEAK 16(6P25.3) WILD-TYPE 
                          100                           297 
[1] "Del Peak 17(6q22.31) mutation analysis"
[1] 3
  DEL PEAK 17(6Q22.31) MUTATED DEL PEAK 17(6Q22.31) WILD-TYPE 
                            95                            302 
  DEL PEAK 17(6Q22.31) MUTATED DEL PEAK 17(6Q22.31) WILD-TYPE 
                            95                            302 
[1] "Del Peak 18(6q26) mutation analysis"
[1] 3
  DEL PEAK 18(6Q26) MUTATED DEL PEAK 18(6Q26) WILD-TYPE 
                        103                         294 
  DEL PEAK 18(6Q26) MUTATED DEL PEAK 18(6Q26) WILD-TYPE 
                        103                         294 
[1] "Del Peak 19(7q11.22) mutation analysis"
[1] 3
  DEL PEAK 19(7Q11.22) MUTATED DEL PEAK 19(7Q11.22) WILD-TYPE 
                            37                            360 
  DEL PEAK 19(7Q11.22) MUTATED DEL PEAK 19(7Q11.22) WILD-TYPE 
                            37                            360 
[1] "Del Peak 20(7q36.3) mutation analysis"
[1] 3
  DEL PEAK 20(7Q36.3) MUTATED DEL PEAK 20(7Q36.3) WILD-TYPE 
                           81                           316 
  DEL PEAK 20(7Q36.3) MUTATED DEL PEAK 20(7Q36.3) WILD-TYPE 
                           81                           316 
[1] "Del Peak 21(8p23.2) mutation analysis"
[1] 3
  DEL PEAK 21(8P23.2) MUTATED DEL PEAK 21(8P23.2) WILD-TYPE 
                          267                           130 
  DEL PEAK 21(8P23.2) MUTATED DEL PEAK 21(8P23.2) WILD-TYPE 
                          267                           130 
[1] "Del Peak 22(9p23) mutation analysis"
[1] 3
  DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE 
                        258                         139 
  DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE 
                        258                         139 
[1] "Del Peak 23(9p21.3) mutation analysis"
[1] 3
  DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE 
                          302                            95 
  DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE 
                          302                            95 
[1] "Del Peak 24(9q21.11) mutation analysis"
[1] 3
  DEL PEAK 24(9Q21.11) MUTATED DEL PEAK 24(9Q21.11) WILD-TYPE 
                           191                            206 
  DEL PEAK 24(9Q21.11) MUTATED DEL PEAK 24(9Q21.11) WILD-TYPE 
                           191                            206 
[1] "Del Peak 25(10p15.3) mutation analysis"
[1] 3
  DEL PEAK 25(10P15.3) MUTATED DEL PEAK 25(10P15.3) WILD-TYPE 
                           178                            219 
  DEL PEAK 25(10P15.3) MUTATED DEL PEAK 25(10P15.3) WILD-TYPE 
                           178                            219 
[1] "Del Peak 26(10p15.1) mutation analysis"
[1] 3
  DEL PEAK 26(10P15.1) MUTATED DEL PEAK 26(10P15.1) WILD-TYPE 
                           168                            229 
  DEL PEAK 26(10P15.1) MUTATED DEL PEAK 26(10P15.1) WILD-TYPE 
                           168                            229 
[1] "Del Peak 27(10q23.31) mutation analysis"
[1] 3
  DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE 
                            203                             194 
  DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE 
                            203                             194 
[1] "Del Peak 28(11p15.5) mutation analysis"
[1] 3
  DEL PEAK 28(11P15.5) MUTATED DEL PEAK 28(11P15.5) WILD-TYPE 
                           183                            214 
  DEL PEAK 28(11P15.5) MUTATED DEL PEAK 28(11P15.5) WILD-TYPE 
                           183                            214 
[1] "Del Peak 29(11q22.1) mutation analysis"
[1] 3
  DEL PEAK 29(11Q22.1) MUTATED DEL PEAK 29(11Q22.1) WILD-TYPE 
                           118                            279 
  DEL PEAK 29(11Q22.1) MUTATED DEL PEAK 29(11Q22.1) WILD-TYPE 
                           118                            279 
[1] "Del Peak 30(11q25) mutation analysis"
[1] 3
  DEL PEAK 30(11Q25) MUTATED DEL PEAK 30(11Q25) WILD-TYPE 
                         143                          254 
  DEL PEAK 30(11Q25) MUTATED DEL PEAK 30(11Q25) WILD-TYPE 
                         143                          254 
[1] "Del Peak 31(12q24.31) mutation analysis"
[1] 3
  DEL PEAK 31(12Q24.31) MUTATED DEL PEAK 31(12Q24.31) WILD-TYPE 
                             63                             334 
  DEL PEAK 31(12Q24.31) MUTATED DEL PEAK 31(12Q24.31) WILD-TYPE 
                             63                             334 
[1] "Del Peak 32(13q12.11) mutation analysis"
[1] 3
  DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE 
                            260                             137 
  DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE 
                            260                             137 
[1] "Del Peak 33(13q14.2) mutation analysis"
[1] 3
  DEL PEAK 33(13Q14.2) MUTATED DEL PEAK 33(13Q14.2) WILD-TYPE 
                           271                            126 
  DEL PEAK 33(13Q14.2) MUTATED DEL PEAK 33(13Q14.2) WILD-TYPE 
                           271                            126 
[1] "Del Peak 34(14q11.2) mutation analysis"
[1] 3
  DEL PEAK 34(14Q11.2) MUTATED DEL PEAK 34(14Q11.2) WILD-TYPE 
                           140                            257 
  DEL PEAK 34(14Q11.2) MUTATED DEL PEAK 34(14Q11.2) WILD-TYPE 
                           140                            257 
[1] "Del Peak 35(15q12) mutation analysis"
[1] 3
  DEL PEAK 35(15Q12) MUTATED DEL PEAK 35(15Q12) WILD-TYPE 
                         131                          266 
  DEL PEAK 35(15Q12) MUTATED DEL PEAK 35(15Q12) WILD-TYPE 
                         131                          266 
[1] "Del Peak 36(15q21.1) mutation analysis"
[1] 3
  DEL PEAK 36(15Q21.1) MUTATED DEL PEAK 36(15Q21.1) WILD-TYPE 
                           124                            273 
  DEL PEAK 36(15Q21.1) MUTATED DEL PEAK 36(15Q21.1) WILD-TYPE 
                           124                            273 
[1] "Del Peak 37(16p13.3) mutation analysis"
[1] 3
  DEL PEAK 37(16P13.3) MUTATED DEL PEAK 37(16P13.3) WILD-TYPE 
                           148                            249 
  DEL PEAK 37(16P13.3) MUTATED DEL PEAK 37(16P13.3) WILD-TYPE 
                           148                            249 
[1] "Del Peak 38(16q23.1) mutation analysis"
[1] 3
  DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE 
                           166                            231 
  DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE 
                           166                            231 
[1] "Del Peak 39(17p11.2) mutation analysis"
[1] 3
  DEL PEAK 39(17P11.2) MUTATED DEL PEAK 39(17P11.2) WILD-TYPE 
                           202                            195 
  DEL PEAK 39(17P11.2) MUTATED DEL PEAK 39(17P11.2) WILD-TYPE 
                           202                            195 
[1] "Del Peak 40(17q11.2) mutation analysis"
[1] 3
  DEL PEAK 40(17Q11.2) MUTATED DEL PEAK 40(17Q11.2) WILD-TYPE 
                            96                            301 
  DEL PEAK 40(17Q11.2) MUTATED DEL PEAK 40(17Q11.2) WILD-TYPE 
                            96                            301 
[1] "Del Peak 41(17q25.3) mutation analysis"
[1] 3
  DEL PEAK 41(17Q25.3) MUTATED DEL PEAK 41(17Q25.3) WILD-TYPE 
                            76                            321 
  DEL PEAK 41(17Q25.3) MUTATED DEL PEAK 41(17Q25.3) WILD-TYPE 
                            76                            321 
[1] "Del Peak 42(18q23) mutation analysis"
[1] 3
  DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE 
                         179                          218 
  DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE 
                         179                          218 
[1] "Del Peak 43(19p13.3) mutation analysis"
[1] 3
  DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE 
                           173                            224 
  DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE 
                           173                            224 
[1] "Del Peak 44(19q13.33) mutation analysis"
[1] 3
  DEL PEAK 44(19Q13.33) MUTATED DEL PEAK 44(19Q13.33) WILD-TYPE 
                            106                             291 
  DEL PEAK 44(19Q13.33) MUTATED DEL PEAK 44(19Q13.33) WILD-TYPE 
                            106                             291 
[1] "Del Peak 45(21q21.1) mutation analysis"
[1] 3
  DEL PEAK 45(21Q21.1) MUTATED DEL PEAK 45(21Q21.1) WILD-TYPE 
                           189                            208 
  DEL PEAK 45(21Q21.1) MUTATED DEL PEAK 45(21Q21.1) WILD-TYPE 
                           189                            208 
[1] "Del Peak 46(21q22.3) mutation analysis"
[1] 3
  DEL PEAK 46(21Q22.3) MUTATED DEL PEAK 46(21Q22.3) WILD-TYPE 
                           224                            173 
  DEL PEAK 46(21Q22.3) MUTATED DEL PEAK 46(21Q22.3) WILD-TYPE 
                           224                            173 
[1] "Del Peak 47(22q11.21) mutation analysis"
[1] 3
  DEL PEAK 47(22Q11.21) MUTATED DEL PEAK 47(22Q11.21) WILD-TYPE 
                             68                             329 
  DEL PEAK 47(22Q11.21) MUTATED DEL PEAK 47(22Q11.21) WILD-TYPE 
                             68                             329 
[1] "Del Peak 48(22q13.32) mutation analysis"
[1] 3
  DEL PEAK 48(22Q13.32) MUTATED DEL PEAK 48(22Q13.32) WILD-TYPE 
                             95                             302 
  DEL PEAK 48(22Q13.32) MUTATED DEL PEAK 48(22Q13.32) WILD-TYPE 
                             95                             302 
[1] "Del Peak 49(Xp22.2) mutation analysis"
[1] 3
  DEL PEAK 49(XP22.2) MUTATED DEL PEAK 49(XP22.2) WILD-TYPE 
                          126                           271 
  DEL PEAK 49(XP22.2) MUTATED DEL PEAK 49(XP22.2) WILD-TYPE 
                          126                           271 
[1] "Del Peak 50(Xp21.1) mutation analysis"
[1] 3
  DEL PEAK 50(XP21.1) MUTATED DEL PEAK 50(XP21.1) WILD-TYPE 
                          127                           270 
  DEL PEAK 50(XP21.1) MUTATED DEL PEAK 50(XP21.1) WILD-TYPE 
                          127                           270 
[1] "Del Peak 51(Xp11.3) mutation analysis"
[1] 3
  DEL PEAK 51(XP11.3) MUTATED DEL PEAK 51(XP11.3) WILD-TYPE 
                          125                           272 
  DEL PEAK 51(XP11.3) MUTATED DEL PEAK 51(XP11.3) WILD-TYPE 
                          125                           272 
[1] "Del Peak 52(Xq22.3) mutation analysis"
[1] 3
  DEL PEAK 52(XQ22.3) MUTATED DEL PEAK 52(XQ22.3) WILD-TYPE 
                           95                           302 
  DEL PEAK 52(XQ22.3) MUTATED DEL PEAK 52(XQ22.3) WILD-TYPE 
                           95                           302 
[1] "data2feature, selection=ALL"
 [1] "MRNA_CNMF"             "MRNA_CHIERARCHICAL"    "CN_CNMF"              
 [4] "METHLYATION_CNMF"      "RPPA_CNMF"             "RPPA_CHIERARCHICAL"   
 [7] "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"          
[10] "MIRSEQ_CHIERARCHICAL" 

Input Data has 10 rows and 397 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'RPPA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'RPPA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "MRNA_CNMF"             "MRNA_CHIERARCHICAL"    "CN_CNMF"              
 [4] "METHLYATION_CNMF"      "RPPA_CNMF"             "RPPA_CHIERARCHICAL"   
 [7] "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"          
[10] "MIRSEQ_CHIERARCHICAL" 
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 397 columns, 0 survival variables, and 10 non-survival variables.
MRNA_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1p34.2) mutation analysis
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          13                            30
  CLUS_2                           7                            43
  CLUS_3                           2                            28
  CLUS_4                           9                            22
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           7                            21
  CLUS_2                           8                            46
  CLUS_3                          16                            56
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          20                           123
  CLUS_2                          11                           118
  CLUS_3                          32                            93
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          12                            86
  CLUS_2                          11                            72
  CLUS_3                          12                            57
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          11                            49
  CLUS_2                           9                            64
  CLUS_3                          13                            48
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          13                            45
  CLUS_2                           6                            41
  CLUS_3                           8                            41
  CLUS_4                           6                            34
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          12                            48
  CLUS_2                          12                            68
  CLUS_3                          22                            57
  CLUS_4                           3                            35
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          20                            96
  CLUS_2                          14                            72
  CLUS_3                          15                            40
D1V9, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          27                           116
  CLUS_2                          20                           145
  CLUS_3                           7                            32
D1V10, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          10                            43
  CLUS_2                          25                           151
  CLUS_3                          19                            99

Clustering(2) Variable = Amp Peak  2(1q21.2) mutation analysis
D2V1, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          19                            24
  CLUS_2                          36                            14
  CLUS_3                          15                            15
  CLUS_4                          17                            14
D2V2, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          18                            10
  CLUS_2                          38                            16
  CLUS_3                          31                            41
D2V3, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          57                            86
  CLUS_2                          92                            37
  CLUS_3                          56                            69
D2V4, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          38                            60
  CLUS_2                          54                            29
  CLUS_3                          30                            39
D2V5, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          38                            22
  CLUS_2                          35                            38
  CLUS_3                          30                            31
D2V6, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          39                            19
  CLUS_2                          23                            24
  CLUS_3                          25                            24
  CLUS_4                          16                            24
D2V7, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          25                            35
  CLUS_2                          58                            22
  CLUS_3                          39                            40
  CLUS_4                          17                            21
D2V8, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          49                            67
  CLUS_2                          60                            26
  CLUS_3                          30                            25
D2V9, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          79                            64
  CLUS_2                          75                            90
  CLUS_3                          22                            17
D2V10, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          34                            19
  CLUS_2                          91                            85
  CLUS_3                          51                            67

Clustering(3) Variable = Amp Peak  3(2p16.1) mutation analysis
D3V1, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          19                            24
  CLUS_2                          40                            10
  CLUS_3                          12                            18
  CLUS_4                          15                            16
D3V2, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          10                            18
  CLUS_2                          40                            14
  CLUS_3                          36                            36
D3V3, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          49                            94
  CLUS_2                         102                            27
  CLUS_3                          65                            60
D3V4, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          43                            55
  CLUS_2                          61                            22
  CLUS_3                          31                            38
D3V5, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          33                            27
  CLUS_2                          38                            35
  CLUS_3                          33                            28
D3V6, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          31                            27
  CLUS_2                          27                            20
  CLUS_3                          28                            21
  CLUS_4                          18                            22
D3V7, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          23                            37
  CLUS_2                          58                            22
  CLUS_3                          44                            35
  CLUS_4                          17                            21
D3V8, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          53                            63
  CLUS_2                          61                            25
  CLUS_3                          28                            27
D3V9, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          81                            62
  CLUS_2                          89                            76
  CLUS_3                          20                            19
D3V10, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          34                            19
  CLUS_2                          85                            91
  CLUS_3                          71                            47

Clustering(4) Variable = Amp Peak  4(2q31.2) mutation analysis
D4V1, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          11                            32
  CLUS_2                          27                            23
  CLUS_3                           8                            22
  CLUS_4                          11                            20
D4V2, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          12                            16
  CLUS_2                          29                            25
  CLUS_3                          16                            56
D4V3, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          30                           113
  CLUS_2                          63                            66
  CLUS_3                          39                            86
D4V4, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          23                            75
  CLUS_2                          48                            35
  CLUS_3                          14                            55
D4V5, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          22                            38
  CLUS_2                          22                            51
  CLUS_3                          21                            40
D4V6, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          18                            40
  CLUS_2                          18                            29
  CLUS_3                          16                            33
  CLUS_4                          13                            27
D4V7, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          13                            47
  CLUS_2                          43                            37
  CLUS_3                          28                            51
  CLUS_4                          11                            27
D4V8, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          31                            85
  CLUS_2                          45                            41
  CLUS_3                          19                            36
D4V9, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          53                            90
  CLUS_2                          50                           115
  CLUS_3                          14                            25
D4V10, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          22                            31
  CLUS_2                          59                           117
  CLUS_3                          36                            82

Clustering(5) Variable = Amp Peak  5(3p11.1) mutation analysis
D5V1, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          15                            28
  CLUS_2                           9                            41
  CLUS_3                           3                            27
  CLUS_4                           7                            24
D5V2, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                           5                            23
  CLUS_2                          12                            42
  CLUS_3                          17                            55
D5V3, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          27                           116
  CLUS_2                          29                           100
  CLUS_3                          24                           101
D5V4, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          19                            79
  CLUS_2                          16                            67
  CLUS_3                          12                            57
D5V5, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                           9                            51
  CLUS_2                          19                            54
  CLUS_3                          10                            51
D5V6, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                           4                            54
  CLUS_2                          12                            35
  CLUS_3                          17                            32
  CLUS_4                           5                            35
D5V7, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          20                            40
  CLUS_2                          15                            65
  CLUS_3                          13                            66
  CLUS_4                           5                            33
D5V8, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          25                            91
  CLUS_2                          20                            66
  CLUS_3                           8                            47
D5V9, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          33                           110
  CLUS_2                          33                           132
  CLUS_3                           5                            34
D5V10, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                           9                            44
  CLUS_2                          36                           140
  CLUS_3                          26                            92

Clustering(6) Variable = Amp Peak  6(3q26.33) mutation analysis
D6V1, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           41                              2
  CLUS_2                           50                              0
  CLUS_3                           23                              7
  CLUS_4                           26                              5
D6V2, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           19                              9
  CLUS_2                           54                              0
  CLUS_3                           67                              5
D6V3, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                          113                             30
  CLUS_2                          129                              0
  CLUS_3                          122                              3
D6V4, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           79                             19
  CLUS_2                           83                              0
  CLUS_3                           67                              2
D6V5, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           55                              5
  CLUS_2                           68                              5
  CLUS_3                           51                             10
D6V6, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           51                              7
  CLUS_2                           44                              3
  CLUS_3                           47                              2
  CLUS_4                           32                              8
D6V7, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           57                              3
  CLUS_2                           80                              0
  CLUS_3                           66                             13
  CLUS_4                           31                              7
D6V8, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                          100                             16
  CLUS_2                           86                              0
  CLUS_3                           48                              7
D6V9, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                          128                             15
  CLUS_2                          154                             11
  CLUS_3                           38                              1
D6V10, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           53                              0
  CLUS_2                          151                             25
  CLUS_3                          116                              2

Clustering(7) Variable = Amp Peak  7(4q12) mutation analysis
D7V1, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        12                          31
  CLUS_2                        18                          32
  CLUS_3                         7                          23
  CLUS_4                        10                          21
D7V2, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                         7                          21
  CLUS_2                        18                          36
  CLUS_3                        22                          50
D7V3, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        19                         124
  CLUS_2                        32                          97
  CLUS_3                        42                          83
D7V4, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        14                          84
  CLUS_2                        22                          61
  CLUS_3                        13                          56
D7V5, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        13                          47
  CLUS_2                        18                          55
  CLUS_3                         9                          52
D7V6, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                         9                          49
  CLUS_2                         9                          38
  CLUS_3                        16                          33
  CLUS_4                         6                          34
D7V7, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        13                          47
  CLUS_2                        22                          58
  CLUS_3                        23                          56
  CLUS_4                         7                          31
D7V8, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        27                          89
  CLUS_2                        24                          62
  CLUS_3                        14                          41
D7V9, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        40                         103
  CLUS_2                        34                         131
  CLUS_3                         6                          33
D7V10, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                         9                          44
  CLUS_2                        40                         136
  CLUS_3                        31                          87

Clustering(8) Variable = Amp Peak  8(5p15.33) mutation analysis
D8V1, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           36                              7
  CLUS_2                           39                             11
  CLUS_3                           23                              7
  CLUS_4                           24                              7
D8V2, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           22                              6
  CLUS_2                           44                             10
  CLUS_3                           56                             16
D8V3, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           99                             44
  CLUS_2                          100                             29
  CLUS_3                          115                             10
D8V4, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           74                             24
  CLUS_2                           62                             21
  CLUS_3                           63                              6
D8V5, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           44                             16
  CLUS_2                           57                             16
  CLUS_3                           51                             10
D8V6, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           44                             14
  CLUS_2                           40                              7
  CLUS_3                           39                             10
  CLUS_4                           29                             11
D8V7, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           44                             16
  CLUS_2                           61                             19
  CLUS_3                           66                             13
  CLUS_4                           32                              6
D8V8, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           96                             20
  CLUS_2                           64                             22
  CLUS_3                           43                             12
D8V9, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                          111                             32
  CLUS_2                          134                             31
  CLUS_3                           32                              7
D8V10, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           39                             14
  CLUS_2                          138                             38
  CLUS_3                          100                             18

Clustering(9) Variable = Amp Peak  9(5p12) mutation analysis
D9V1, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        28                          15
  CLUS_2                        34                          16
  CLUS_3                        19                          11
  CLUS_4                        22                           9
D9V2, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        19                           9
  CLUS_2                        39                          15
  CLUS_3                        45                          27
D9V3, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        70                          73
  CLUS_2                        84                          45
  CLUS_3                       107                          18
D9V4, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        56                          42
  CLUS_2                        54                          29
  CLUS_3                        55                          14
D9V5, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        38                          22
  CLUS_2                        48                          25
  CLUS_3                        44                          17
D9V6, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        39                          19
  CLUS_2                        31                          16
  CLUS_3                        33                          16
  CLUS_4                        27                          13
D9V7, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        32                          28
  CLUS_2                        55                          25
  CLUS_3                        59                          20
  CLUS_4                        24                          14
D9V8, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        73                          43
  CLUS_2                        58                          28
  CLUS_3                        39                          16
D9V9, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        94                          49
  CLUS_2                       106                          59
  CLUS_3                        33                           6
D9V10, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        38                          15
  CLUS_2                       109                          67
  CLUS_3                        86                          32

Clustering(10) Variable = Amp Peak 10(6p12.1) mutation analysis
D10V1, multiclass
        clus
vv       AMP PEAK 10(6P12.1) MUTATED AMP PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                          12                            31
  CLUS_2                          17                            33
  CLUS_3                          13                            17
  CLUS_4                          12                            19
D10V2, multiclass
        clus
vv       AMP PEAK 10(6P12.1) MUTATED AMP PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                          13                            15
  CLUS_2                          17                            37
  CLUS_3                          24                            48
D10V3, multiclass
        clus
vv       AMP PEAK 10(6P12.1) MUTATED AMP PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                          32                           111
  CLUS_2                          45                            84
  CLUS_3                          53                            72
D10V4, multiclass
        clus
vv       AMP PEAK 10(6P12.1) MUTATED AMP PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                          26                            72
  CLUS_2                          31                            52
  CLUS_3                          17                            52
D10V5, multiclass
        clus
vv       AMP PEAK 10(6P12.1) MUTATED AMP PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                          20                            40
  CLUS_2                          24                            49
  CLUS_3                          19                            42
D10V6, multiclass
        clus
vv       AMP PEAK 10(6P12.1) MUTATED AMP PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                          17                            41
  CLUS_2                          18                            29
  CLUS_3                          19                            30
  CLUS_4                           9                            31
D10V7, multiclass
        clus
vv       AMP PEAK 10(6P12.1) MUTATED AMP PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                          13                            47
  CLUS_2                          27                            53
  CLUS_3                          25                            54
  CLUS_4                          16                            22
D10V8, multiclass
        clus
vv       AMP PEAK 10(6P12.1) MUTATED AMP PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                          35                            81
  CLUS_2                          27                            59
  CLUS_3                          19                            36
D10V9, multiclass
        clus
vv       AMP PEAK 10(6P12.1) MUTATED AMP PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                          45                            98
  CLUS_2                          55                           110
  CLUS_3                          13                            26
D10V10, multiclass
        clus
vv       AMP PEAK 10(6P12.1) MUTATED AMP PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                          19                            34
  CLUS_2                          52                           124
  CLUS_3                          42                            76

Clustering(11) Variable = Amp Peak 11(6q12) mutation analysis
D11V1, multiclass
        clus
vv       AMP PEAK 11(6Q12) MUTATED AMP PEAK 11(6Q12) WILD-TYPE
  CLUS_1                        14                          29
  CLUS_2                        16                          34
  CLUS_3                         9                          21
  CLUS_4                        10                          21
D11V2, multiclass
        clus
vv       AMP PEAK 11(6Q12) MUTATED AMP PEAK 11(6Q12) WILD-TYPE
  CLUS_1                        10                          18
  CLUS_2                        17                          37
  CLUS_3                        22                          50
D11V3, multiclass
        clus
vv       AMP PEAK 11(6Q12) MUTATED AMP PEAK 11(6Q12) WILD-TYPE
  CLUS_1                        28                         115
  CLUS_2                        39                          90
  CLUS_3                        50                          75
D11V4, multiclass
        clus
vv       AMP PEAK 11(6Q12) MUTATED AMP PEAK 11(6Q12) WILD-TYPE
  CLUS_1                        21                          77
  CLUS_2                        31                          52
  CLUS_3                        16                          53
D11V5, multiclass
        clus
vv       AMP PEAK 11(6Q12) MUTATED AMP PEAK 11(6Q12) WILD-TYPE
  CLUS_1                        23                          37
  CLUS_2                        20                          53
  CLUS_3                        17                          44
D11V6, multiclass
        clus
vv       AMP PEAK 11(6Q12) MUTATED AMP PEAK 11(6Q12) WILD-TYPE
  CLUS_1                        20                          38
  CLUS_2                        16                          31
  CLUS_3                        16                          33
  CLUS_4                         8                          32
D11V7, multiclass
        clus
vv       AMP PEAK 11(6Q12) MUTATED AMP PEAK 11(6Q12) WILD-TYPE
  CLUS_1                        13                          47
  CLUS_2                        27                          53
  CLUS_3                        25                          54
  CLUS_4                        13                          25
D11V8, multiclass
        clus
vv       AMP PEAK 11(6Q12) MUTATED AMP PEAK 11(6Q12) WILD-TYPE
  CLUS_1                        29                          87
  CLUS_2                        30                          56
  CLUS_3                        19                          36
D11V9, multiclass
        clus
vv       AMP PEAK 11(6Q12) MUTATED AMP PEAK 11(6Q12) WILD-TYPE
  CLUS_1                        41                         102
  CLUS_2                        46                         119
  CLUS_3                        14                          25
D11V10, multiclass
        clus
vv       AMP PEAK 11(6Q12) MUTATED AMP PEAK 11(6Q12) WILD-TYPE
  CLUS_1                        20                          33
  CLUS_2                        45                         131
  CLUS_3                        36                          82

Clustering(12) Variable = Amp Peak 12(7p11.2) mutation analysis
D12V1, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          20                            23
  CLUS_2                          32                            18
  CLUS_3                          13                            17
  CLUS_4                          14                            17
D12V2, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          14                            14
  CLUS_2                          34                            20
  CLUS_3                          31                            41
D12V3, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          59                            84
  CLUS_2                          80                            49
  CLUS_3                          54                            71
D12V4, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          40                            58
  CLUS_2                          52                            31
  CLUS_3                          27                            42
D12V5, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          26                            34
  CLUS_2                          37                            36
  CLUS_3                          29                            32
D12V6, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          25                            33
  CLUS_2                          24                            23
  CLUS_3                          25                            24
  CLUS_4                          18                            22
D12V7, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          30                            30
  CLUS_2                          51                            29
  CLUS_3                          37                            42
  CLUS_4                          16                            22
D12V8, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          57                            59
  CLUS_2                          55                            31
  CLUS_3                          22                            33
D12V9, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          74                            69
  CLUS_2                          75                            90
  CLUS_3                          21                            18
D12V10, multiclass
        clus
vv       AMP PEAK 12(7P11.2) MUTATED AMP PEAK 12(7P11.2) WILD-TYPE
  CLUS_1                          32                            21
  CLUS_2                          80                            96
  CLUS_3                          58                            60

Clustering(13) Variable = Amp Peak 13(7q21.2) mutation analysis
D13V1, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          27                            16
  CLUS_2                          34                            16
  CLUS_3                          13                            17
  CLUS_4                          15                            16
D13V2, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          14                            14
  CLUS_2                          36                            18
  CLUS_3                          39                            33
D13V3, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          51                            92
  CLUS_2                          96                            33
  CLUS_3                          62                            63
D13V4, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          35                            63
  CLUS_2                          58                            25
  CLUS_3                          30                            39
D13V5, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          35                            25
  CLUS_2                          42                            31
  CLUS_3                          24                            37
D13V6, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          31                            27
  CLUS_2                          22                            25
  CLUS_3                          30                            19
  CLUS_4                          18                            22
D13V7, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          30                            30
  CLUS_2                          56                            24
  CLUS_3                          40                            39
  CLUS_4                          17                            21
D13V8, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          59                            57
  CLUS_2                          58                            28
  CLUS_3                          26                            29
D13V9, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          80                            63
  CLUS_2                          77                            88
  CLUS_3                          24                            15
D13V10, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          35                            18
  CLUS_2                          87                            89
  CLUS_3                          59                            59

Clustering(14) Variable = Amp Peak 14(8p11.23) mutation analysis
D14V1, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           31                             12
  CLUS_2                           23                             27
  CLUS_3                           11                             19
  CLUS_4                           13                             18
D14V2, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           11                             17
  CLUS_2                           25                             29
  CLUS_3                           42                             30
D14V3, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           57                             86
  CLUS_2                           57                             72
  CLUS_3                           70                             55
D14V4, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           34                             64
  CLUS_2                           40                             43
  CLUS_3                           37                             32
D14V5, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           42                             31
  CLUS_3                           31                             30
D14V6, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           23                             24
  CLUS_3                           26                             23
  CLUS_4                           26                             14
D14V7, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           40                             20
  CLUS_2                           39                             41
  CLUS_3                           29                             50
  CLUS_4                           19                             19
D14V8, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           54                             62
  CLUS_2                           45                             41
  CLUS_3                           28                             27
D14V9, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           75                             68
  CLUS_2                           70                             95
  CLUS_3                           15                             24
D14V10, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           22                             31
  CLUS_2                           82                             94
  CLUS_3                           56                             62

Clustering(15) Variable = Amp Peak 15(8q24.21) mutation analysis
D15V1, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           30                             13
  CLUS_2                           33                             17
  CLUS_3                           20                             10
  CLUS_4                           23                              8
D15V2, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           21                              7
  CLUS_2                           35                             19
  CLUS_3                           50                             22
D15V3, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           96                             47
  CLUS_2                           93                             36
  CLUS_3                           91                             34
D15V4, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           68                             30
  CLUS_2                           59                             24
  CLUS_3                           48                             21
D15V5, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           44                             16
  CLUS_2                           55                             18
  CLUS_3                           44                             17
D15V6, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           42                             16
  CLUS_2                           36                             11
  CLUS_3                           38                             11
  CLUS_4                           27                             13
D15V7, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           40                             20
  CLUS_2                           58                             22
  CLUS_3                           59                             20
  CLUS_4                           26                             12
D15V8, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           78                             38
  CLUS_2                           65                             21
  CLUS_3                           40                             15
D15V9, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                          104                             39
  CLUS_2                          115                             50
  CLUS_3                           24                             15
D15V10, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           36                             17
  CLUS_2                          124                             52
  CLUS_3                           83                             35

Clustering(16) Variable = Amp Peak 16(9p24.1) mutation analysis
D16V1, multiclass
        clus
vv       AMP PEAK 16(9P24.1) MUTATED AMP PEAK 16(9P24.1) WILD-TYPE
  CLUS_1                           5                            38
  CLUS_2                          13                            37
  CLUS_3                           6                            24
  CLUS_4                           6                            25
D16V2, multiclass
        clus
vv       AMP PEAK 16(9P24.1) MUTATED AMP PEAK 16(9P24.1) WILD-TYPE
  CLUS_1                           6                            22
  CLUS_2                          16                            38
  CLUS_3                           8                            64
D16V3, multiclass
        clus
vv       AMP PEAK 16(9P24.1) MUTATED AMP PEAK 16(9P24.1) WILD-TYPE
  CLUS_1                          29                           114
  CLUS_2                          34                            95
  CLUS_3                          10                           115
D16V4, multiclass
        clus
vv       AMP PEAK 16(9P24.1) MUTATED AMP PEAK 16(9P24.1) WILD-TYPE
  CLUS_1                          14                            84
  CLUS_2                          20                            63
  CLUS_3                          10                            59
D16V5, multiclass
        clus
vv       AMP PEAK 16(9P24.1) MUTATED AMP PEAK 16(9P24.1) WILD-TYPE
  CLUS_1                          20                            40
  CLUS_2                           8                            65
  CLUS_3                           7                            54
D16V6, multiclass
        clus
vv       AMP PEAK 16(9P24.1) MUTATED AMP PEAK 16(9P24.1) WILD-TYPE
  CLUS_1                          19                            39
  CLUS_2                           8                            39
  CLUS_3                           4                            45
  CLUS_4                           4                            36
D16V7, multiclass
        clus
vv       AMP PEAK 16(9P24.1) MUTATED AMP PEAK 16(9P24.1) WILD-TYPE
  CLUS_1                           9                            51
  CLUS_2                          24                            56
  CLUS_3                          13                            66
  CLUS_4                           4                            34
D16V8, multiclass
        clus
vv       AMP PEAK 16(9P24.1) MUTATED AMP PEAK 16(9P24.1) WILD-TYPE
  CLUS_1                          14                           102
  CLUS_2                          27                            59
  CLUS_3                           9                            46
D16V9, multiclass
        clus
vv       AMP PEAK 16(9P24.1) MUTATED AMP PEAK 16(9P24.1) WILD-TYPE
  CLUS_1                          31                           112
  CLUS_2                          27                           138
  CLUS_3                           6                            33
D16V10, multiclass
        clus
vv       AMP PEAK 16(9P24.1) MUTATED AMP PEAK 16(9P24.1) WILD-TYPE
  CLUS_1                          11                            42
  CLUS_2                          37                           139
  CLUS_3                          16                           102

Clustering(17) Variable = Amp Peak 17(9p13.3) mutation analysis
D17V1, multiclass
        clus
vv       AMP PEAK 17(9P13.3) MUTATED AMP PEAK 17(9P13.3) WILD-TYPE
  CLUS_1                          11                            32
  CLUS_2                          13                            37
  CLUS_3                           4                            26
  CLUS_4                          12                            19
D17V2, multiclass
        clus
vv       AMP PEAK 17(9P13.3) MUTATED AMP PEAK 17(9P13.3) WILD-TYPE
  CLUS_1                           8                            20
  CLUS_2                          17                            37
  CLUS_3                          15                            57
D17V3, multiclass
        clus
vv       AMP PEAK 17(9P13.3) MUTATED AMP PEAK 17(9P13.3) WILD-TYPE
  CLUS_1                          38                           105
  CLUS_2                          45                            84
  CLUS_3                          26                            99
D17V4, multiclass
        clus
vv       AMP PEAK 17(9P13.3) MUTATED AMP PEAK 17(9P13.3) WILD-TYPE
  CLUS_1                          24                            74
  CLUS_2                          33                            50
  CLUS_3                          16                            53
D17V5, multiclass
        clus
vv       AMP PEAK 17(9P13.3) MUTATED AMP PEAK 17(9P13.3) WILD-TYPE
  CLUS_1                          21                            39
  CLUS_2                          13                            60
  CLUS_3                          14                            47
D17V6, multiclass
        clus
vv       AMP PEAK 17(9P13.3) MUTATED AMP PEAK 17(9P13.3) WILD-TYPE
  CLUS_1                          22                            36
  CLUS_2                          13                            34
  CLUS_3                           9                            40
  CLUS_4                           4                            36
D17V7, multiclass
        clus
vv       AMP PEAK 17(9P13.3) MUTATED AMP PEAK 17(9P13.3) WILD-TYPE
  CLUS_1                          12                            48
  CLUS_2                          28                            52
  CLUS_3                          22                            57
  CLUS_4                           4                            34
D17V8, multiclass
        clus
vv       AMP PEAK 17(9P13.3) MUTATED AMP PEAK 17(9P13.3) WILD-TYPE
  CLUS_1                          27                            89
  CLUS_2                          28                            58
  CLUS_3                          11                            44
D17V9, multiclass
        clus
vv       AMP PEAK 17(9P13.3) MUTATED AMP PEAK 17(9P13.3) WILD-TYPE
  CLUS_1                          40                           103
  CLUS_2                          42                           123
  CLUS_3                          14                            25
D17V10, multiclass
        clus
vv       AMP PEAK 17(9P13.3) MUTATED AMP PEAK 17(9P13.3) WILD-TYPE
  CLUS_1                          15                            38
  CLUS_2                          48                           128
  CLUS_3                          33                            85

Clustering(18) Variable = Amp Peak 18(11q13.3) mutation analysis
D18V1, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           17                             26
  CLUS_2                           10                             40
  CLUS_3                           11                             19
  CLUS_4                           14                             17
D18V2, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           12                             16
  CLUS_2                           11                             43
  CLUS_3                           29                             43
D18V3, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           38                            105
  CLUS_2                           48                             81
  CLUS_3                           57                             68
D18V4, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           24                             74
  CLUS_2                           34                             49
  CLUS_3                           37                             32
D18V5, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           24                             49
  CLUS_3                           17                             44
D18V6, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           15                             32
  CLUS_3                           22                             27
  CLUS_4                            7                             33
D18V7, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           27                             33
  CLUS_2                           17                             63
  CLUS_3                           30                             49
  CLUS_4                           16                             22
D18V8, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           46                             70
  CLUS_2                           23                             63
  CLUS_3                           21                             34
D18V9, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           54                             89
  CLUS_2                           66                             99
  CLUS_3                            9                             30
D18V10, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           14                             39
  CLUS_2                           69                            107
  CLUS_3                           46                             72

Clustering(19) Variable = Amp Peak 19(12p13.33) mutation analysis
D19V1, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            13                              30
  CLUS_2                            32                              18
  CLUS_3                            12                              18
  CLUS_4                            14                              17
D19V2, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            11                              17
  CLUS_2                            32                              22
  CLUS_3                            28                              44
D19V3, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            51                              92
  CLUS_2                            83                              46
  CLUS_3                            64                              61
D19V4, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            39                              59
  CLUS_2                            57                              26
  CLUS_3                            38                              31
D19V5, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            36                              24
  CLUS_2                            34                              39
  CLUS_3                            33                              28
D19V6, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            34                              24
  CLUS_2                            25                              22
  CLUS_3                            25                              24
  CLUS_4                            19                              21
D19V7, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            18                              42
  CLUS_2                            52                              28
  CLUS_3                            42                              37
  CLUS_4                            18                              20
D19V8, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            46                              70
  CLUS_2                            53                              33
  CLUS_3                            31                              24
D19V9, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            72                              71
  CLUS_2                            87                              78
  CLUS_3                            17                              22
D19V10, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            29                              24
  CLUS_2                            84                              92
  CLUS_3                            63                              55

Clustering(20) Variable = Amp Peak 20(12q15) mutation analysis
D20V1, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         11                           32
  CLUS_2                         20                           30
  CLUS_3                         11                           19
  CLUS_4                         14                           17
D20V2, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         12                           16
  CLUS_2                         21                           33
  CLUS_3                         23                           49
D20V3, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         41                          102
  CLUS_2                         61                           68
  CLUS_3                         42                           83
D20V4, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         24                           74
  CLUS_2                         42                           41
  CLUS_3                         24                           45
D20V5, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         25                           35
  CLUS_2                         26                           47
  CLUS_3                         23                           38
D20V6, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         24                           34
  CLUS_2                         21                           26
  CLUS_3                         16                           33
  CLUS_4                         13                           27
D20V7, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         15                           45
  CLUS_2                         36                           44
  CLUS_3                         31                           48
  CLUS_4                         14                           24
D20V8, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         34                           82
  CLUS_2                         37                           49
  CLUS_3                         25                           30
D20V9, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         55                           88
  CLUS_2                         60                          105
  CLUS_3                         11                           28
D20V10, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         18                           35
  CLUS_2                         64                          112
  CLUS_3                         44                           74

Clustering(21) Variable = Amp Peak 21(13q34) mutation analysis
D21V1, multiclass
        clus
vv       AMP PEAK 21(13Q34) MUTATED AMP PEAK 21(13Q34) WILD-TYPE
  CLUS_1                          7                           36
  CLUS_2                         10                           40
  CLUS_3                          5                           25
  CLUS_4                          5                           26
D21V2, multiclass
        clus
vv       AMP PEAK 21(13Q34) MUTATED AMP PEAK 21(13Q34) WILD-TYPE
  CLUS_1                          9                           19
  CLUS_2                         10                           44
  CLUS_3                          8                           64
D21V3, multiclass
        clus
vv       AMP PEAK 21(13Q34) MUTATED AMP PEAK 21(13Q34) WILD-TYPE
  CLUS_1                         23                          120
  CLUS_2                         32                           97
  CLUS_3                         16                          109
D21V4, multiclass
        clus
vv       AMP PEAK 21(13Q34) MUTATED AMP PEAK 21(13Q34) WILD-TYPE
  CLUS_1                         13                           85
  CLUS_2                         18                           65
  CLUS_3                         16                           53
D21V5, multiclass
        clus
vv       AMP PEAK 21(13Q34) MUTATED AMP PEAK 21(13Q34) WILD-TYPE
  CLUS_1                         10                           50
  CLUS_2                         15                           58
  CLUS_3                         11                           50
D21V6, multiclass
        clus
vv       AMP PEAK 21(13Q34) MUTATED AMP PEAK 21(13Q34) WILD-TYPE
  CLUS_1                         11                           47
  CLUS_2                          8                           39
  CLUS_3                         14                           35
  CLUS_4                          3                           37
D21V7, multiclass
        clus
vv       AMP PEAK 21(13Q34) MUTATED AMP PEAK 21(13Q34) WILD-TYPE
  CLUS_1                         13                           47
  CLUS_2                         14                           66
  CLUS_3                         12                           67
  CLUS_4                          6                           32
D21V8, multiclass
        clus
vv       AMP PEAK 21(13Q34) MUTATED AMP PEAK 21(13Q34) WILD-TYPE
  CLUS_1                         19                           97
  CLUS_2                         13                           73
  CLUS_3                         13                           42
D21V9, multiclass
        clus
vv       AMP PEAK 21(13Q34) MUTATED AMP PEAK 21(13Q34) WILD-TYPE
  CLUS_1                         29                          114
  CLUS_2                         31                          134
  CLUS_3                          2                           37
D21V10, multiclass
        clus
vv       AMP PEAK 21(13Q34) MUTATED AMP PEAK 21(13Q34) WILD-TYPE
  CLUS_1                          5                           48
  CLUS_2                         35                          141
  CLUS_3                         22                           96

Clustering(22) Variable = Amp Peak 22(14q13.3) mutation analysis
D22V1, multiclass
        clus
vv       AMP PEAK 22(14Q13.3) MUTATED AMP PEAK 22(14Q13.3) WILD-TYPE
  CLUS_1                           18                             25
  CLUS_2                           15                             35
  CLUS_3                            7                             23
  CLUS_4                           12                             19
D22V2, multiclass
        clus
vv       AMP PEAK 22(14Q13.3) MUTATED AMP PEAK 22(14Q13.3) WILD-TYPE
  CLUS_1                           12                             16
  CLUS_2                           14                             40
  CLUS_3                           26                             46
D22V3, multiclass
        clus
vv       AMP PEAK 22(14Q13.3) MUTATED AMP PEAK 22(14Q13.3) WILD-TYPE
  CLUS_1                           40                            103
  CLUS_2                           48                             81
  CLUS_3                           33                             92
D22V4, multiclass
        clus
vv       AMP PEAK 22(14Q13.3) MUTATED AMP PEAK 22(14Q13.3) WILD-TYPE
  CLUS_1                           24                             74
  CLUS_2                           32                             51
  CLUS_3                           18                             51
D22V5, multiclass
        clus
vv       AMP PEAK 22(14Q13.3) MUTATED AMP PEAK 22(14Q13.3) WILD-TYPE
  CLUS_1                           17                             43
  CLUS_2                           27                             46
  CLUS_3                           19                             42
D22V6, multiclass
        clus
vv       AMP PEAK 22(14Q13.3) MUTATED AMP PEAK 22(14Q13.3) WILD-TYPE
  CLUS_1                           19                             39
  CLUS_2                           17                             30
  CLUS_3                           22                             27
  CLUS_4                            5                             35
D22V7, multiclass
        clus
vv       AMP PEAK 22(14Q13.3) MUTATED AMP PEAK 22(14Q13.3) WILD-TYPE
  CLUS_1                           21                             39
  CLUS_2                           26                             54
  CLUS_3                           22                             57
  CLUS_4                           15                             23
D22V8, multiclass
        clus
vv       AMP PEAK 22(14Q13.3) MUTATED AMP PEAK 22(14Q13.3) WILD-TYPE
  CLUS_1                           45                             71
  CLUS_2                           27                             59
  CLUS_3                           12                             43
D22V9, multiclass
        clus
vv       AMP PEAK 22(14Q13.3) MUTATED AMP PEAK 22(14Q13.3) WILD-TYPE
  CLUS_1                           55                             88
  CLUS_2                           47                            118
  CLUS_3                            7                             32
D22V10, multiclass
        clus
vv       AMP PEAK 22(14Q13.3) MUTATED AMP PEAK 22(14Q13.3) WILD-TYPE
  CLUS_1                           10                             43
  CLUS_2                           59                            117
  CLUS_3                           40                             78

Clustering(23) Variable = Amp Peak 23(15q26.3) mutation analysis
D23V1, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           15                             28
  CLUS_2                           26                             24
  CLUS_3                            9                             21
  CLUS_4                           10                             21
D23V2, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                            6                             22
  CLUS_2                           28                             26
  CLUS_3                           26                             46
D23V3, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           30                            113
  CLUS_2                           61                             68
  CLUS_3                           48                             77
D23V4, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           16                             82
  CLUS_2                           40                             43
  CLUS_3                           27                             42
D23V5, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           18                             42
  CLUS_2                           28                             45
  CLUS_3                           26                             35
D23V6, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           14                             44
  CLUS_2                           25                             22
  CLUS_3                           20                             29
  CLUS_4                           13                             27
D23V7, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           13                             47
  CLUS_2                           43                             37
  CLUS_3                           24                             55
  CLUS_4                           15                             23
D23V8, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           35                             81
  CLUS_2                           44                             42
  CLUS_3                           16                             39
D23V9, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           52                             91
  CLUS_2                           54                            111
  CLUS_3                           22                             17
D23V10, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           28                             25
  CLUS_2                           48                            128
  CLUS_3                           52                             66

Clustering(24) Variable = Amp Peak 24(17q25.1) mutation analysis
D24V1, multiclass
        clus
vv       AMP PEAK 24(17Q25.1) MUTATED AMP PEAK 24(17Q25.1) WILD-TYPE
  CLUS_1                           19                             24
  CLUS_2                           32                             18
  CLUS_3                            9                             21
  CLUS_4                           18                             13
D24V2, multiclass
        clus
vv       AMP PEAK 24(17Q25.1) MUTATED AMP PEAK 24(17Q25.1) WILD-TYPE
  CLUS_1                           14                             14
  CLUS_2                           34                             20
  CLUS_3                           30                             42
D24V3, multiclass
        clus
vv       AMP PEAK 24(17Q25.1) MUTATED AMP PEAK 24(17Q25.1) WILD-TYPE
  CLUS_1                           46                             97
  CLUS_2                           83                             46
  CLUS_3                           62                             63
D24V4, multiclass
        clus
vv       AMP PEAK 24(17Q25.1) MUTATED AMP PEAK 24(17Q25.1) WILD-TYPE
  CLUS_1                           34                             64
  CLUS_2                           55                             28
  CLUS_3                           25                             44
D24V5, multiclass
        clus
vv       AMP PEAK 24(17Q25.1) MUTATED AMP PEAK 24(17Q25.1) WILD-TYPE
  CLUS_1                           33                             27
  CLUS_2                           32                             41
  CLUS_3                           25                             36
D24V6, multiclass
        clus
vv       AMP PEAK 24(17Q25.1) MUTATED AMP PEAK 24(17Q25.1) WILD-TYPE
  CLUS_1                           26                             32
  CLUS_2                           26                             21
  CLUS_3                           24                             25
  CLUS_4                           14                             26
D24V7, multiclass
        clus
vv       AMP PEAK 24(17Q25.1) MUTATED AMP PEAK 24(17Q25.1) WILD-TYPE
  CLUS_1                           27                             33
  CLUS_2                           50                             30
  CLUS_3                           35                             44
  CLUS_4                           14                             24
D24V8, multiclass
        clus
vv       AMP PEAK 24(17Q25.1) MUTATED AMP PEAK 24(17Q25.1) WILD-TYPE
  CLUS_1                           46                             70
  CLUS_2                           53                             33
  CLUS_3                           27                             28
D24V9, multiclass
        clus
vv       AMP PEAK 24(17Q25.1) MUTATED AMP PEAK 24(17Q25.1) WILD-TYPE
  CLUS_1                           72                             71
  CLUS_2                           75                             90
  CLUS_3                           17                             22
D24V10, multiclass
        clus
vv       AMP PEAK 24(17Q25.1) MUTATED AMP PEAK 24(17Q25.1) WILD-TYPE
  CLUS_1                           26                             27
  CLUS_2                           81                             95
  CLUS_3                           57                             61

Clustering(25) Variable = Amp Peak 25(18p11.32) mutation analysis
D25V1, multiclass
        clus
vv       AMP PEAK 25(18P11.32) MUTATED AMP PEAK 25(18P11.32) WILD-TYPE
  CLUS_1                            13                              30
  CLUS_2                            25                              25
  CLUS_3                             8                              22
  CLUS_4                             9                              22
D25V2, multiclass
        clus
vv       AMP PEAK 25(18P11.32) MUTATED AMP PEAK 25(18P11.32) WILD-TYPE
  CLUS_1                             8                              20
  CLUS_2                            28                              26
  CLUS_3                            19                              53
D25V3, multiclass
        clus
vv       AMP PEAK 25(18P11.32) MUTATED AMP PEAK 25(18P11.32) WILD-TYPE
  CLUS_1                            32                             111
  CLUS_2                            63                              66
  CLUS_3                            42                              83
D25V4, multiclass
        clus
vv       AMP PEAK 25(18P11.32) MUTATED AMP PEAK 25(18P11.32) WILD-TYPE
  CLUS_1                            18                              80
  CLUS_2                            38                              45
  CLUS_3                            28                              41
D25V5, multiclass
        clus
vv       AMP PEAK 25(18P11.32) MUTATED AMP PEAK 25(18P11.32) WILD-TYPE
  CLUS_1                            26                              34
  CLUS_2                            30                              43
  CLUS_3                            18                              43
D25V6, multiclass
        clus
vv       AMP PEAK 25(18P11.32) MUTATED AMP PEAK 25(18P11.32) WILD-TYPE
  CLUS_1                            24                              34
  CLUS_2                            18                              29
  CLUS_3                            21                              28
  CLUS_4                            11                              29
D25V7, multiclass
        clus
vv       AMP PEAK 25(18P11.32) MUTATED AMP PEAK 25(18P11.32) WILD-TYPE
  CLUS_1                            19                              41
  CLUS_2                            33                              47
  CLUS_3                            27                              52
  CLUS_4                            10                              28
D25V8, multiclass
        clus
vv       AMP PEAK 25(18P11.32) MUTATED AMP PEAK 25(18P11.32) WILD-TYPE
  CLUS_1                            34                              82
  CLUS_2                            37                              49
  CLUS_3                            18                              37
D25V9, multiclass
        clus
vv       AMP PEAK 25(18P11.32) MUTATED AMP PEAK 25(18P11.32) WILD-TYPE
  CLUS_1                            53                              90
  CLUS_2                            54                             111
  CLUS_3                            15                              24
D25V10, multiclass
        clus
vv       AMP PEAK 25(18P11.32) MUTATED AMP PEAK 25(18P11.32) WILD-TYPE
  CLUS_1                            21                              32
  CLUS_2                            53                             123
  CLUS_3                            48                              70

Clustering(26) Variable = Amp Peak 26(18q11.2) mutation analysis
D26V1, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                            9                             34
  CLUS_2                           24                             26
  CLUS_3                            4                             26
  CLUS_4                           16                             15
D26V2, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           11                             17
  CLUS_2                           27                             27
  CLUS_3                           15                             57
D26V3, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           26                            117
  CLUS_2                           57                             72
  CLUS_3                           43                             82
D26V4, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           17                             81
  CLUS_2                           37                             46
  CLUS_3                           21                             48
D26V5, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           24                             36
  CLUS_2                           23                             50
  CLUS_3                           16                             45
D26V6, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           22                             36
  CLUS_2                           15                             32
  CLUS_3                           15                             34
  CLUS_4                           11                             29
D26V7, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           13                             47
  CLUS_2                           34                             46
  CLUS_3                           33                             46
  CLUS_4                            7                             31
D26V8, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           25                             91
  CLUS_2                           36                             50
  CLUS_3                           26                             29
D26V9, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           50                             93
  CLUS_2                           47                            118
  CLUS_3                           15                             24
D26V10, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           20                             33
  CLUS_2                           44                            132
  CLUS_3                           48                             70

Clustering(27) Variable = Amp Peak 27(19q12) mutation analysis
D27V1, multiclass
        clus
vv       AMP PEAK 27(19Q12) MUTATED AMP PEAK 27(19Q12) WILD-TYPE
  CLUS_1                         16                           27
  CLUS_2                         25                           25
  CLUS_3                         10                           20
  CLUS_4                         13                           18
D27V2, multiclass
        clus
vv       AMP PEAK 27(19Q12) MUTATED AMP PEAK 27(19Q12) WILD-TYPE
  CLUS_1                         14                           14
  CLUS_2                         25                           29
  CLUS_3                         25                           47
D27V3, multiclass
        clus
vv       AMP PEAK 27(19Q12) MUTATED AMP PEAK 27(19Q12) WILD-TYPE
  CLUS_1                         45                           98
  CLUS_2                         77                           52
  CLUS_3                         45                           80
D27V4, multiclass
        clus
vv       AMP PEAK 27(19Q12) MUTATED AMP PEAK 27(19Q12) WILD-TYPE
  CLUS_1                         35                           63
  CLUS_2                         41                           42
  CLUS_3                         29                           40
D27V5, multiclass
        clus
vv       AMP PEAK 27(19Q12) MUTATED AMP PEAK 27(19Q12) WILD-TYPE
  CLUS_1                         31                           29
  CLUS_2                         27                           46
  CLUS_3                         28                           33
D27V6, multiclass
        clus
vv       AMP PEAK 27(19Q12) MUTATED AMP PEAK 27(19Q12) WILD-TYPE
  CLUS_1                         31                           27
  CLUS_2                         24                           23
  CLUS_3                         21                           28
  CLUS_4                         10                           30
D27V7, multiclass
        clus
vv       AMP PEAK 27(19Q12) MUTATED AMP PEAK 27(19Q12) WILD-TYPE
  CLUS_1                         19                           41
  CLUS_2                         39                           41
  CLUS_3                         36                           43
  CLUS_4                         18                           20
D27V8, multiclass
        clus
vv       AMP PEAK 27(19Q12) MUTATED AMP PEAK 27(19Q12) WILD-TYPE
  CLUS_1                         42                           74
  CLUS_2                         41                           45
  CLUS_3                         29                           26
D27V9, multiclass
        clus
vv       AMP PEAK 27(19Q12) MUTATED AMP PEAK 27(19Q12) WILD-TYPE
  CLUS_1                         60                           83
  CLUS_2                         68                           97
  CLUS_3                         17                           22
D27V10, multiclass
        clus
vv       AMP PEAK 27(19Q12) MUTATED AMP PEAK 27(19Q12) WILD-TYPE
  CLUS_1                         19                           34
  CLUS_2                         74                          102
  CLUS_3                         52                           66

Clustering(28) Variable = Amp Peak 28(19q13.2) mutation analysis
D28V1, multiclass
        clus
vv       AMP PEAK 28(19Q13.2) MUTATED AMP PEAK 28(19Q13.2) WILD-TYPE
  CLUS_1                           20                             23
  CLUS_2                           24                             26
  CLUS_3                           11                             19
  CLUS_4                           12                             19
D28V2, multiclass
        clus
vv       AMP PEAK 28(19Q13.2) MUTATED AMP PEAK 28(19Q13.2) WILD-TYPE
  CLUS_1                           12                             16
  CLUS_2                           24                             30
  CLUS_3                           31                             41
D28V3, multiclass
        clus
vv       AMP PEAK 28(19Q13.2) MUTATED AMP PEAK 28(19Q13.2) WILD-TYPE
  CLUS_1                           48                             95
  CLUS_2                           74                             55
  CLUS_3                           48                             77
D28V4, multiclass
        clus
vv       AMP PEAK 28(19Q13.2) MUTATED AMP PEAK 28(19Q13.2) WILD-TYPE
  CLUS_1                           35                             63
  CLUS_2                           43                             40
  CLUS_3                           26                             43
D28V5, multiclass
        clus
vv       AMP PEAK 28(19Q13.2) MUTATED AMP PEAK 28(19Q13.2) WILD-TYPE
  CLUS_1                           30                             30
  CLUS_2                           28                             45
  CLUS_3                           29                             32
D28V6, multiclass
        clus
vv       AMP PEAK 28(19Q13.2) MUTATED AMP PEAK 28(19Q13.2) WILD-TYPE
  CLUS_1                           29                             29
  CLUS_2                           26                             21
  CLUS_3                           19                             30
  CLUS_4                           13                             27
D28V7, multiclass
        clus
vv       AMP PEAK 28(19Q13.2) MUTATED AMP PEAK 28(19Q13.2) WILD-TYPE
  CLUS_1                           23                             37
  CLUS_2                           38                             42
  CLUS_3                           34                             45
  CLUS_4                           19                             19
D28V8, multiclass
        clus
vv       AMP PEAK 28(19Q13.2) MUTATED AMP PEAK 28(19Q13.2) WILD-TYPE
  CLUS_1                           42                             74
  CLUS_2                           43                             43
  CLUS_3                           29                             26
D28V9, multiclass
        clus
vv       AMP PEAK 28(19Q13.2) MUTATED AMP PEAK 28(19Q13.2) WILD-TYPE
  CLUS_1                           64                             79
  CLUS_2                           69                             96
  CLUS_3                           17                             22
D28V10, multiclass
        clus
vv       AMP PEAK 28(19Q13.2) MUTATED AMP PEAK 28(19Q13.2) WILD-TYPE
  CLUS_1                           20                             33
  CLUS_2                           74                            102
  CLUS_3                           56                             62

Clustering(29) Variable = Amp Peak 29(20p12.2) mutation analysis
D29V1, multiclass
        clus
vv       AMP PEAK 29(20P12.2) MUTATED AMP PEAK 29(20P12.2) WILD-TYPE
  CLUS_1                           23                             20
  CLUS_2                           36                             14
  CLUS_3                            9                             21
  CLUS_4                           12                             19
D29V2, multiclass
        clus
vv       AMP PEAK 29(20P12.2) MUTATED AMP PEAK 29(20P12.2) WILD-TYPE
  CLUS_1                            8                             20
  CLUS_2                           36                             18
  CLUS_3                           36                             36
D29V3, multiclass
        clus
vv       AMP PEAK 29(20P12.2) MUTATED AMP PEAK 29(20P12.2) WILD-TYPE
  CLUS_1                           53                             90
  CLUS_2                           92                             37
  CLUS_3                           66                             59
D29V4, multiclass
        clus
vv       AMP PEAK 29(20P12.2) MUTATED AMP PEAK 29(20P12.2) WILD-TYPE
  CLUS_1                           42                             56
  CLUS_2                           60                             23
  CLUS_3                           33                             36
D29V5, multiclass
        clus
vv       AMP PEAK 29(20P12.2) MUTATED AMP PEAK 29(20P12.2) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           39                             34
  CLUS_3                           33                             28
D29V6, multiclass
        clus
vv       AMP PEAK 29(20P12.2) MUTATED AMP PEAK 29(20P12.2) WILD-TYPE
  CLUS_1                           28                             30
  CLUS_2                           29                             18
  CLUS_3                           29                             20
  CLUS_4                           17                             23
D29V7, multiclass
        clus
vv       AMP PEAK 29(20P12.2) MUTATED AMP PEAK 29(20P12.2) WILD-TYPE
  CLUS_1                           28                             32
  CLUS_2                           52                             28
  CLUS_3                           44                             35
  CLUS_4                           19                             19
D29V8, multiclass
        clus
vv       AMP PEAK 29(20P12.2) MUTATED AMP PEAK 29(20P12.2) WILD-TYPE
  CLUS_1                           53                             63
  CLUS_2                           56                             30
  CLUS_3                           34                             21
D29V9, multiclass
        clus
vv       AMP PEAK 29(20P12.2) MUTATED AMP PEAK 29(20P12.2) WILD-TYPE
  CLUS_1                           71                             72
  CLUS_2                           90                             75
  CLUS_3                           22                             17
D29V10, multiclass
        clus
vv       AMP PEAK 29(20P12.2) MUTATED AMP PEAK 29(20P12.2) WILD-TYPE
  CLUS_1                           32                             21
  CLUS_2                           86                             90
  CLUS_3                           65                             53

Clustering(30) Variable = Amp Peak 30(20q11.21) mutation analysis
D30V1, multiclass
        clus
vv       AMP PEAK 30(20Q11.21) MUTATED AMP PEAK 30(20Q11.21) WILD-TYPE
  CLUS_1                            26                              17
  CLUS_2                            29                              21
  CLUS_3                            17                              13
  CLUS_4                            18                              13
D30V2, multiclass
        clus
vv       AMP PEAK 30(20Q11.21) MUTATED AMP PEAK 30(20Q11.21) WILD-TYPE
  CLUS_1                            16                              12
  CLUS_2                            30                              24
  CLUS_3                            44                              28
D30V3, multiclass
        clus
vv       AMP PEAK 30(20Q11.21) MUTATED AMP PEAK 30(20Q11.21) WILD-TYPE
  CLUS_1                            64                              79
  CLUS_2                            84                              45
  CLUS_3                            81                              44
D30V4, multiclass
        clus
vv       AMP PEAK 30(20Q11.21) MUTATED AMP PEAK 30(20Q11.21) WILD-TYPE
  CLUS_1                            48                              50
  CLUS_2                            58                              25
  CLUS_3                            37                              32
D30V5, multiclass
        clus
vv       AMP PEAK 30(20Q11.21) MUTATED AMP PEAK 30(20Q11.21) WILD-TYPE
  CLUS_1                            35                              25
  CLUS_2                            45                              28
  CLUS_3                            33                              28
D30V6, multiclass
        clus
vv       AMP PEAK 30(20Q11.21) MUTATED AMP PEAK 30(20Q11.21) WILD-TYPE
  CLUS_1                            33                              25
  CLUS_2                            30                              17
  CLUS_3                            30                              19
  CLUS_4                            20                              20
D30V7, multiclass
        clus
vv       AMP PEAK 30(20Q11.21) MUTATED AMP PEAK 30(20Q11.21) WILD-TYPE
  CLUS_1                            32                              28
  CLUS_2                            48                              32
  CLUS_3                            51                              28
  CLUS_4                            24                              14
D30V8, multiclass
        clus
vv       AMP PEAK 30(20Q11.21) MUTATED AMP PEAK 30(20Q11.21) WILD-TYPE
  CLUS_1                            66                              50
  CLUS_2                            53                              33
  CLUS_3                            36                              19
D30V9, multiclass
        clus
vv       AMP PEAK 30(20Q11.21) MUTATED AMP PEAK 30(20Q11.21) WILD-TYPE
  CLUS_1                            82                              61
  CLUS_2                            94                              71
  CLUS_3                            24                              15
D30V10, multiclass
        clus
vv       AMP PEAK 30(20Q11.21) MUTATED AMP PEAK 30(20Q11.21) WILD-TYPE
  CLUS_1                            29                              24
  CLUS_2                            98                              78
  CLUS_3                            73                              45

Clustering(31) Variable = Amp Peak 31(22q11.21) mutation analysis
D31V1, multiclass
        clus
vv       AMP PEAK 31(22Q11.21) MUTATED AMP PEAK 31(22Q11.21) WILD-TYPE
  CLUS_1                            22                              21
  CLUS_2                            30                              20
  CLUS_3                            10                              20
  CLUS_4                            13                              18
D31V2, multiclass
        clus
vv       AMP PEAK 31(22Q11.21) MUTATED AMP PEAK 31(22Q11.21) WILD-TYPE
  CLUS_1                             9                              19
  CLUS_2                            30                              24
  CLUS_3                            36                              36
D31V3, multiclass
        clus
vv       AMP PEAK 31(22Q11.21) MUTATED AMP PEAK 31(22Q11.21) WILD-TYPE
  CLUS_1                            54                              89
  CLUS_2                            80                              49
  CLUS_3                            65                              60
D31V4, multiclass
        clus
vv       AMP PEAK 31(22Q11.21) MUTATED AMP PEAK 31(22Q11.21) WILD-TYPE
  CLUS_1                            38                              60
  CLUS_2                            56                              27
  CLUS_3                            33                              36
D31V5, multiclass
        clus
vv       AMP PEAK 31(22Q11.21) MUTATED AMP PEAK 31(22Q11.21) WILD-TYPE
  CLUS_1                            29                              31
  CLUS_2                            38                              35
  CLUS_3                            32                              29
D31V6, multiclass
        clus
vv       AMP PEAK 31(22Q11.21) MUTATED AMP PEAK 31(22Q11.21) WILD-TYPE
  CLUS_1                            24                              34
  CLUS_2                            27                              20
  CLUS_3                            27                              22
  CLUS_4                            21                              19
D31V7, multiclass
        clus
vv       AMP PEAK 31(22Q11.21) MUTATED AMP PEAK 31(22Q11.21) WILD-TYPE
  CLUS_1                            26                              34
  CLUS_2                            51                              29
  CLUS_3                            37                              42
  CLUS_4                            19                              19
D31V8, multiclass
        clus
vv       AMP PEAK 31(22Q11.21) MUTATED AMP PEAK 31(22Q11.21) WILD-TYPE
  CLUS_1                            56                              60
  CLUS_2                            53                              33
  CLUS_3                            24                              31
D31V9, multiclass
        clus
vv       AMP PEAK 31(22Q11.21) MUTATED AMP PEAK 31(22Q11.21) WILD-TYPE
  CLUS_1                            72                              71
  CLUS_2                            84                              81
  CLUS_3                            17                              22
D31V10, multiclass
        clus
vv       AMP PEAK 31(22Q11.21) MUTATED AMP PEAK 31(22Q11.21) WILD-TYPE
  CLUS_1                            26                              27
  CLUS_2                            79                              97
  CLUS_3                            68                              50

Clustering(32) Variable = Amp Peak 32(Xq28) mutation analysis
D32V1, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        10                          33
  CLUS_2                        16                          34
  CLUS_3                         6                          24
  CLUS_4                         9                          22
D32V2, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                         7                          21
  CLUS_2                        17                          37
  CLUS_3                        17                          55
D32V3, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        31                         112
  CLUS_2                        45                          84
  CLUS_3                        30                          95
D32V4, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        22                          76
  CLUS_2                        29                          54
  CLUS_3                        14                          55
D32V5, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        15                          45
  CLUS_2                        26                          47
  CLUS_3                        11                          50
D32V6, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        12                          46
  CLUS_2                         9                          38
  CLUS_3                        20                          29
  CLUS_4                        11                          29
D32V7, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        13                          47
  CLUS_2                        27                          53
  CLUS_3                        24                          55
  CLUS_4                         6                          32
D32V8, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        25                          91
  CLUS_2                        28                          58
  CLUS_3                        17                          38
D32V9, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        39                         104
  CLUS_2                        38                         127
  CLUS_3                        12                          27
D32V10, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        15                          38
  CLUS_2                        42                         134
  CLUS_3                        32                          86

Clustering(33) Variable = Del Peak  1(1p36.22) mutation analysis
D33V1, multiclass
        clus
vv       DEL PEAK  1(1P36.22) MUTATED DEL PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                            9                             34
  CLUS_2                           37                             13
  CLUS_3                           13                             17
  CLUS_4                           10                             21
D33V2, multiclass
        clus
vv       DEL PEAK  1(1P36.22) MUTATED DEL PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           11                             17
  CLUS_2                           41                             13
  CLUS_3                           17                             55
D33V3, multiclass
        clus
vv       DEL PEAK  1(1P36.22) MUTATED DEL PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           34                            109
  CLUS_2                          107                             22
  CLUS_3                           31                             94
D33V4, multiclass
        clus
vv       DEL PEAK  1(1P36.22) MUTATED DEL PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           17                             81
  CLUS_2                           61                             22
  CLUS_3                           22                             47
D33V5, multiclass
        clus
vv       DEL PEAK  1(1P36.22) MUTATED DEL PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           27                             46
  CLUS_3                           27                             34
D33V6, multiclass
        clus
vv       DEL PEAK  1(1P36.22) MUTATED DEL PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           29                             18
  CLUS_3                           17                             32
  CLUS_4                           14                             26
D33V7, multiclass
        clus
vv       DEL PEAK  1(1P36.22) MUTATED DEL PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           16                             44
  CLUS_2                           60                             20
  CLUS_3                           27                             52
  CLUS_4                           12                             26
D33V8, multiclass
        clus
vv       DEL PEAK  1(1P36.22) MUTATED DEL PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           36                             80
  CLUS_2                           61                             25
  CLUS_3                           18                             37
D33V9, multiclass
        clus
vv       DEL PEAK  1(1P36.22) MUTATED DEL PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           63                             80
  CLUS_2                           59                            106
  CLUS_3                           23                             16
D33V10, multiclass
        clus
vv       DEL PEAK  1(1P36.22) MUTATED DEL PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           33                             20
  CLUS_2                           64                            112
  CLUS_3                           48                             70

Clustering(34) Variable = Del Peak  2(1p13.2) mutation analysis
D34V1, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          17                            26
  CLUS_2                          35                            15
  CLUS_3                           8                            22
  CLUS_4                          10                            21
D34V2, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          10                            18
  CLUS_2                          36                            18
  CLUS_3                          24                            48
D34V3, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          35                           108
  CLUS_2                          93                            36
  CLUS_3                          44                            81
D34V4, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          20                            78
  CLUS_2                          54                            29
  CLUS_3                          28                            41
D34V5, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          33                            27
  CLUS_2                          28                            45
  CLUS_3                          24                            37
D34V6, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          24                            34
  CLUS_2                          28                            19
  CLUS_3                          20                            29
  CLUS_4                          13                            27
D34V7, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          23                            37
  CLUS_2                          53                            27
  CLUS_3                          25                            54
  CLUS_4                          12                            26
D34V8, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          38                            78
  CLUS_2                          54                            32
  CLUS_3                          21                            34
D34V9, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          64                            79
  CLUS_2                          63                           102
  CLUS_3                          21                            18
D34V10, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          31                            22
  CLUS_2                          66                           110
  CLUS_3                          51                            67

Clustering(35) Variable = Del Peak  3(2p25.3) mutation analysis
D35V1, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           7                            36
  CLUS_2                           3                            47
  CLUS_3                           1                            29
  CLUS_4                           7                            24
D35V2, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           6                            22
  CLUS_2                           4                            50
  CLUS_3                           8                            64
D35V3, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          10                           133
  CLUS_2                           9                           120
  CLUS_3                          18                           107
D35V4, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           7                            91
  CLUS_2                           6                            77
  CLUS_3                           9                            60
D35V5, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           8                            52
  CLUS_2                           7                            66
  CLUS_3                           2                            59
D35V6, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           6                            52
  CLUS_2                           4                            43
  CLUS_3                           5                            44
  CLUS_4                           2                            38
D35V7, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           8                            52
  CLUS_2                           4                            76
  CLUS_3                           9                            70
  CLUS_4                           4                            34
D35V8, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          12                           104
  CLUS_2                           5                            81
  CLUS_3                           8                            47
D35V9, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          19                           124
  CLUS_2                          13                           152
  CLUS_3                           1                            38
D35V10, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           2                            51
  CLUS_2                          23                           153
  CLUS_3                           8                           110

Clustering(36) Variable = Del Peak  4(2q22.1) mutation analysis
D36V1, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           9                            34
  CLUS_2                          16                            34
  CLUS_3                           6                            24
  CLUS_4                          12                            19
D36V2, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           9                            19
  CLUS_2                          18                            36
  CLUS_3                          16                            56
D36V3, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          22                           121
  CLUS_2                          47                            82
  CLUS_3                          36                            89
D36V4, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          16                            82
  CLUS_2                          25                            58
  CLUS_3                          23                            46
D36V5, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          14                            46
  CLUS_2                          19                            54
  CLUS_3                          12                            49
D36V6, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          13                            45
  CLUS_2                          12                            35
  CLUS_3                          16                            33
  CLUS_4                           4                            36
D36V7, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          13                            47
  CLUS_2                          23                            57
  CLUS_3                          26                            53
  CLUS_4                           6                            32
D36V8, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          25                            91
  CLUS_2                          25                            61
  CLUS_3                          18                            37
D36V9, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          41                           102
  CLUS_2                          41                           124
  CLUS_3                          12                            27
D36V10, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          14                            39
  CLUS_2                          52                           124
  CLUS_3                          28                            90

Clustering(37) Variable = Del Peak  5(2q36.2) mutation analysis
D37V1, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                           9                            34
  CLUS_2                          26                            24
  CLUS_3                           3                            27
  CLUS_4                          12                            19
D37V2, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                           5                            23
  CLUS_2                          30                            24
  CLUS_3                          15                            57
D37V3, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          23                           120
  CLUS_2                          74                            55
  CLUS_3                          35                            90
D37V4, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          17                            81
  CLUS_2                          44                            39
  CLUS_3                          25                            44
D37V5, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          23                            37
  CLUS_2                          17                            56
  CLUS_3                          18                            43
D37V6, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          16                            42
  CLUS_2                          20                            27
  CLUS_3                          10                            39
  CLUS_4                          12                            28
D37V7, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          17                            43
  CLUS_2                          40                            40
  CLUS_3                          18                            61
  CLUS_4                           5                            33
D37V8, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          23                            93
  CLUS_2                          44                            42
  CLUS_3                          13                            42
D37V9, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          48                            95
  CLUS_2                          54                           111
  CLUS_3                          13                            26
D37V10, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          18                            35
  CLUS_2                          54                           122
  CLUS_3                          43                            75

Clustering(38) Variable = Del Peak  6(3p25.3) mutation analysis
D38V1, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          31                            12
  CLUS_2                          42                             8
  CLUS_3                          23                             7
  CLUS_4                          25                             6
D38V2, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          19                             9
  CLUS_2                          46                             8
  CLUS_3                          56                            16
D38V3, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         103                            40
  CLUS_2                         110                            19
  CLUS_3                         100                            25
D38V4, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          70                            28
  CLUS_2                          76                             7
  CLUS_3                          55                            14
D38V5, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          45                            15
  CLUS_2                          57                            16
  CLUS_3                          50                            11
D38V6, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          44                            14
  CLUS_2                          40                             7
  CLUS_3                          41                             8
  CLUS_4                          27                            13
D38V7, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          48                            12
  CLUS_2                          68                            12
  CLUS_3                          61                            18
  CLUS_4                          27                            11
D38V8, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          82                            34
  CLUS_2                          74                            12
  CLUS_3                          48                             7
D38V9, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         110                            33
  CLUS_2                         133                            32
  CLUS_3                          31                             8
D38V10, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          46                             7
  CLUS_2                         127                            49
  CLUS_3                         101                            17

Clustering(39) Variable = Del Peak  7(3p13) mutation analysis
D39V1, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        39                           4
  CLUS_2                        42                           8
  CLUS_3                        23                           7
  CLUS_4                        27                           4
D39V2, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        22                           6
  CLUS_2                        47                           7
  CLUS_3                        62                          10
D39V3, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       105                          38
  CLUS_2                       119                          10
  CLUS_3                       116                           9
D39V4, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        75                          23
  CLUS_2                        79                           4
  CLUS_3                        62                           7
D39V5, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        51                           9
  CLUS_2                        62                          11
  CLUS_3                        50                          11
D39V6, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        48                          10
  CLUS_2                        43                           4
  CLUS_3                        44                           5
  CLUS_4                        28                          12
D39V7, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        53                           7
  CLUS_2                        70                          10
  CLUS_3                        66                          13
  CLUS_4                        29                           9
D39V8, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        90                          26
  CLUS_2                        77                           9
  CLUS_3                        51                           4
D39V9, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       124                          19
  CLUS_2                       142                          23
  CLUS_3                        33                           6
D39V10, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        45                           8
  CLUS_2                       143                          33
  CLUS_3                       111                           7

Clustering(40) Variable = Del Peak  8(3p12.3) mutation analysis
D40V1, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          39                             4
  CLUS_2                          42                             8
  CLUS_3                          22                             8
  CLUS_4                          27                             4
D40V2, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          21                             7
  CLUS_2                          47                             7
  CLUS_3                          62                            10
D40V3, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         103                            40
  CLUS_2                         116                            13
  CLUS_3                         113                            12
D40V4, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          72                            26
  CLUS_2                          76                             7
  CLUS_3                          61                             8
D40V5, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          50                            10
  CLUS_2                          60                            13
  CLUS_3                          50                            11
D40V6, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          47                            11
  CLUS_2                          42                             5
  CLUS_3                          43                             6
  CLUS_4                          28                            12
D40V7, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          52                             8
  CLUS_2                          70                            10
  CLUS_3                          64                            15
  CLUS_4                          28                            10
D40V8, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          88                            28
  CLUS_2                          76                            10
  CLUS_3                          50                             5
D40V9, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         119                            24
  CLUS_2                         138                            27
  CLUS_3                          34                             5
D40V10, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          45                             8
  CLUS_2                         138                            38
  CLUS_3                         108                            10

Clustering(41) Variable = Del Peak  9(3q11.1) mutation analysis
D41V1, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           6                            37
  CLUS_2                           6                            44
  CLUS_3                           6                            24
  CLUS_4                           5                            26
D41V2, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           6                            22
  CLUS_2                           6                            48
  CLUS_3                          11                            61
D41V3, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          24                           119
  CLUS_2                          23                           106
  CLUS_3                          12                           113
D41V4, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          17                            81
  CLUS_2                          14                            69
  CLUS_3                           4                            65
D41V5, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           9                            51
  CLUS_2                           8                            65
  CLUS_3                           7                            54
D41V6, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           9                            49
  CLUS_2                           8                            39
  CLUS_3                           5                            44
  CLUS_4                           2                            38
D41V7, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           8                            52
  CLUS_2                          12                            68
  CLUS_3                          12                            67
  CLUS_4                           4                            34
D41V8, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          14                           102
  CLUS_2                          13                            73
  CLUS_3                           9                            46
D41V9, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          18                           125
  CLUS_2                          26                           139
  CLUS_3                           5                            34
D41V10, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           6                            47
  CLUS_2                          26                           150
  CLUS_3                          17                           101

Clustering(42) Variable = Del Peak 10(4p15.2) mutation analysis
D42V1, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          30                            13
  CLUS_2                          38                            12
  CLUS_3                          11                            19
  CLUS_4                          14                            17
D42V2, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          10                            18
  CLUS_2                          41                            13
  CLUS_3                          42                            30
D42V3, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          70                            73
  CLUS_2                          99                            30
  CLUS_3                          70                            55
D42V4, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          44                            54
  CLUS_2                          61                            22
  CLUS_3                          44                            25
D42V5, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          42                            18
  CLUS_2                          47                            26
  CLUS_3                          38                            23
D42V6, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          35                            23
  CLUS_2                          35                            12
  CLUS_3                          37                            12
  CLUS_4                          20                            20
D42V7, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          38                            22
  CLUS_2                          56                            24
  CLUS_3                          40                            39
  CLUS_4                          22                            16
D42V8, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          63                            53
  CLUS_2                          61                            25
  CLUS_3                          32                            23
D42V9, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          92                            51
  CLUS_2                         100                            65
  CLUS_3                          20                            19
D42V10, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          31                            22
  CLUS_2                         108                            68
  CLUS_3                          73                            45

Clustering(43) Variable = Del Peak 11(4q22.1) mutation analysis
D43V1, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          28                            15
  CLUS_2                          36                            14
  CLUS_3                          10                            20
  CLUS_4                          18                            13
D43V2, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          16                            12
  CLUS_2                          39                            15
  CLUS_3                          37                            35
D43V3, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          65                            78
  CLUS_2                          90                            39
  CLUS_3                          62                            63
D43V4, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          40                            58
  CLUS_2                          53                            30
  CLUS_3                          34                            35
D43V5, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          41                            19
  CLUS_2                          37                            36
  CLUS_3                          36                            25
D43V6, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          39                            19
  CLUS_2                          28                            19
  CLUS_3                          26                            23
  CLUS_4                          21                            19
D43V7, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          32                            28
  CLUS_2                          56                            24
  CLUS_3                          37                            42
  CLUS_4                          21                            17
D43V8, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          54                            62
  CLUS_2                          59                            27
  CLUS_3                          33                            22
D43V9, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          86                            57
  CLUS_2                          83                            82
  CLUS_3                          21                            18
D43V10, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          34                            19
  CLUS_2                          90                            86
  CLUS_3                          66                            52

Clustering(44) Variable = Del Peak 12(4q32.3) mutation analysis
D44V1, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          28                            15
  CLUS_2                          40                            10
  CLUS_3                          13                            17
  CLUS_4                          22                             9
D44V2, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          19                             9
  CLUS_2                          43                            11
  CLUS_3                          41                            31
D44V3, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          72                            71
  CLUS_2                         104                            25
  CLUS_3                          72                            53
D44V4, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          46                            52
  CLUS_2                          62                            21
  CLUS_3                          44                            25
D44V5, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          44                            16
  CLUS_2                          41                            32
  CLUS_3                          36                            25
D44V6, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          39                            19
  CLUS_2                          30                            17
  CLUS_3                          31                            18
  CLUS_4                          21                            19
D44V7, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          33                            27
  CLUS_2                          62                            18
  CLUS_3                          42                            37
  CLUS_4                          23                            15
D44V8, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          63                            53
  CLUS_2                          62                            24
  CLUS_3                          35                            20
D44V9, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          96                            47
  CLUS_2                         100                            65
  CLUS_3                          22                            17
D44V10, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          35                            18
  CLUS_2                         101                            75
  CLUS_3                          82                            36

Clustering(45) Variable = Del Peak 13(4q35.2) mutation analysis
D45V1, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          29                            14
  CLUS_2                          38                            12
  CLUS_3                          15                            15
  CLUS_4                          23                             8
D45V2, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          20                             8
  CLUS_2                          41                            13
  CLUS_3                          44                            28
D45V3, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          76                            67
  CLUS_2                         104                            25
  CLUS_3                          73                            52
D45V4, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          47                            51
  CLUS_2                          65                            18
  CLUS_3                          42                            27
D45V5, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          42                            18
  CLUS_2                          44                            29
  CLUS_3                          37                            24
D45V6, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          38                            20
  CLUS_2                          31                            16
  CLUS_3                          33                            16
  CLUS_4                          21                            19
D45V7, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          32                            28
  CLUS_2                          63                            17
  CLUS_3                          46                            33
  CLUS_4                          22                            16
D45V8, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          67                            49
  CLUS_2                          62                            24
  CLUS_3                          34                            21
D45V9, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          95                            48
  CLUS_2                         101                            64
  CLUS_3                          24                            15
D45V10, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          37                            16
  CLUS_2                         105                            71
  CLUS_3                          78                            40

Clustering(46) Variable = Del Peak 14(5q11.2) mutation analysis
D46V1, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          31                            12
  CLUS_2                          38                            12
  CLUS_3                          20                            10
  CLUS_4                          23                             8
D46V2, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          18                            10
  CLUS_2                          43                            11
  CLUS_3                          51                            21
D46V3, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          73                            70
  CLUS_2                         108                            21
  CLUS_3                         109                            16
D46V4, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          57                            41
  CLUS_2                          69                            14
  CLUS_3                          56                            13
D46V5, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          43                            17
  CLUS_2                          52                            21
  CLUS_3                          45                            16
D46V6, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          36                            22
  CLUS_2                          37                            10
  CLUS_3                          37                            12
  CLUS_4                          30                            10
D46V7, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          38                            22
  CLUS_2                          63                            17
  CLUS_3                          58                            21
  CLUS_4                          27                            11
D46V8, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          80                            36
  CLUS_2                          65                            21
  CLUS_3                          41                            14
D46V9, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                         107                            36
  CLUS_2                         122                            43
  CLUS_3                          30                             9
D46V10, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          41                            12
  CLUS_2                         115                            61
  CLUS_3                         103                            15

Clustering(47) Variable = Del Peak 15(5q31.1) mutation analysis
D47V1, multiclass
        clus
vv       DEL PEAK 15(5Q31.1) MUTATED DEL PEAK 15(5Q31.1) WILD-TYPE
  CLUS_1                          34                             9
  CLUS_2                          40                            10
  CLUS_3                          19                            11
  CLUS_4                          22                             9
D47V2, multiclass
        clus
vv       DEL PEAK 15(5Q31.1) MUTATED DEL PEAK 15(5Q31.1) WILD-TYPE
  CLUS_1                          18                            10
  CLUS_2                          44                            10
  CLUS_3                          53                            19
D47V3, multiclass
        clus
vv       DEL PEAK 15(5Q31.1) MUTATED DEL PEAK 15(5Q31.1) WILD-TYPE
  CLUS_1                          86                            57
  CLUS_2                         111                            18
  CLUS_3                         111                            14
D47V4, multiclass
        clus
vv       DEL PEAK 15(5Q31.1) MUTATED DEL PEAK 15(5Q31.1) WILD-TYPE
  CLUS_1                          63                            35
  CLUS_2                          71                            12
  CLUS_3                          63                             6
D47V5, multiclass
        clus
vv       DEL PEAK 15(5Q31.1) MUTATED DEL PEAK 15(5Q31.1) WILD-TYPE
  CLUS_1                          42                            18
  CLUS_2                          53                            20
  CLUS_3                          50                            11
D47V6, multiclass
        clus
vv       DEL PEAK 15(5Q31.1) MUTATED DEL PEAK 15(5Q31.1) WILD-TYPE
  CLUS_1                          37                            21
  CLUS_2                          38                             9
  CLUS_3                          38                            11
  CLUS_4                          32                             8
D47V7, multiclass
        clus
vv       DEL PEAK 15(5Q31.1) MUTATED DEL PEAK 15(5Q31.1) WILD-TYPE
  CLUS_1                          42                            18
  CLUS_2                          66                            14
  CLUS_3                          57                            22
  CLUS_4                          29                             9
D47V8, multiclass
        clus
vv       DEL PEAK 15(5Q31.1) MUTATED DEL PEAK 15(5Q31.1) WILD-TYPE
  CLUS_1                          84                            32
  CLUS_2                          69                            17
  CLUS_3                          41                            14
D47V9, multiclass
        clus
vv       DEL PEAK 15(5Q31.1) MUTATED DEL PEAK 15(5Q31.1) WILD-TYPE
  CLUS_1                         109                            34
  CLUS_2                         131                            34
  CLUS_3                          32                             7
D47V10, multiclass
        clus
vv       DEL PEAK 15(5Q31.1) MUTATED DEL PEAK 15(5Q31.1) WILD-TYPE
  CLUS_1                          40                            13
  CLUS_2                         126                            50
  CLUS_3                         106                            12

Clustering(48) Variable = Del Peak 16(6p25.3) mutation analysis
D48V1, multiclass
        clus
vv       DEL PEAK 16(6P25.3) MUTATED DEL PEAK 16(6P25.3) WILD-TYPE
  CLUS_1                           8                            35
  CLUS_2                          17                            33
  CLUS_3                           6                            24
  CLUS_4                           5                            26
D48V2, multiclass
        clus
vv       DEL PEAK 16(6P25.3) MUTATED DEL PEAK 16(6P25.3) WILD-TYPE
  CLUS_1                           3                            25
  CLUS_2                          17                            37
  CLUS_3                          16                            56
D48V3, multiclass
        clus
vv       DEL PEAK 16(6P25.3) MUTATED DEL PEAK 16(6P25.3) WILD-TYPE
  CLUS_1                          31                           112
  CLUS_2                          45                            84
  CLUS_3                          24                           101
D48V4, multiclass
        clus
vv       DEL PEAK 16(6P25.3) MUTATED DEL PEAK 16(6P25.3) WILD-TYPE
  CLUS_1                          18                            80
  CLUS_2                          34                            49
  CLUS_3                          14                            55
D48V5, multiclass
        clus
vv       DEL PEAK 16(6P25.3) MUTATED DEL PEAK 16(6P25.3) WILD-TYPE
  CLUS_1                          14                            46
  CLUS_2                          22                            51
  CLUS_3                          12                            49
D48V6, multiclass
        clus
vv       DEL PEAK 16(6P25.3) MUTATED DEL PEAK 16(6P25.3) WILD-TYPE
  CLUS_1                          15                            43
  CLUS_2                           4                            43
  CLUS_3                          16                            33
  CLUS_4                          13                            27
D48V7, multiclass
        clus
vv       DEL PEAK 16(6P25.3) MUTATED DEL PEAK 16(6P25.3) WILD-TYPE
  CLUS_1                          15                            45
  CLUS_2                          31                            49
  CLUS_3                          13                            66
  CLUS_4                           7                            31
D48V8, multiclass
        clus
vv       DEL PEAK 16(6P25.3) MUTATED DEL PEAK 16(6P25.3) WILD-TYPE
  CLUS_1                          26                            90
  CLUS_2                          31                            55
  CLUS_3                           9                            46
D48V9, multiclass
        clus
vv       DEL PEAK 16(6P25.3) MUTATED DEL PEAK 16(6P25.3) WILD-TYPE
  CLUS_1                          34                           109
  CLUS_2                          39                           126
  CLUS_3                          15                            24
D48V10, multiclass
        clus
vv       DEL PEAK 16(6P25.3) MUTATED DEL PEAK 16(6P25.3) WILD-TYPE
  CLUS_1                          19                            34
  CLUS_2                          41                           135
  CLUS_3                          28                            90

Clustering(49) Variable = Del Peak 17(6q22.31) mutation analysis
D49V1, multiclass
        clus
vv       DEL PEAK 17(6Q22.31) MUTATED DEL PEAK 17(6Q22.31) WILD-TYPE
  CLUS_1                            7                             36
  CLUS_2                           20                             30
  CLUS_3                            4                             26
  CLUS_4                            6                             25
D49V2, multiclass
        clus
vv       DEL PEAK 17(6Q22.31) MUTATED DEL PEAK 17(6Q22.31) WILD-TYPE
  CLUS_1                            4                             24
  CLUS_2                           22                             32
  CLUS_3                           11                             61
D49V3, multiclass
        clus
vv       DEL PEAK 17(6Q22.31) MUTATED DEL PEAK 17(6Q22.31) WILD-TYPE
  CLUS_1                           26                            117
  CLUS_2                           44                             85
  CLUS_3                           25                            100
D49V4, multiclass
        clus
vv       DEL PEAK 17(6Q22.31) MUTATED DEL PEAK 17(6Q22.31) WILD-TYPE
  CLUS_1                           18                             80
  CLUS_2                           33                             50
  CLUS_3                           11                             58
D49V5, multiclass
        clus
vv       DEL PEAK 17(6Q22.31) MUTATED DEL PEAK 17(6Q22.31) WILD-TYPE
  CLUS_1                           17                             43
  CLUS_2                           20                             53
  CLUS_3                           13                             48
D49V6, multiclass
        clus
vv       DEL PEAK 17(6Q22.31) MUTATED DEL PEAK 17(6Q22.31) WILD-TYPE
  CLUS_1                           17                             41
  CLUS_2                            9                             38
  CLUS_3                           16                             33
  CLUS_4                            8                             32
D49V7, multiclass
        clus
vv       DEL PEAK 17(6Q22.31) MUTATED DEL PEAK 17(6Q22.31) WILD-TYPE
  CLUS_1                           10                             50
  CLUS_2                           30                             50
  CLUS_3                           16                             63
  CLUS_4                            8                             30
D49V8, multiclass
        clus
vv       DEL PEAK 17(6Q22.31) MUTATED DEL PEAK 17(6Q22.31) WILD-TYPE
  CLUS_1                           24                             92
  CLUS_2                           31                             55
  CLUS_3                            9                             46
D49V9, multiclass
        clus
vv       DEL PEAK 17(6Q22.31) MUTATED DEL PEAK 17(6Q22.31) WILD-TYPE
  CLUS_1                           37                            106
  CLUS_2                           32                            133
  CLUS_3                           12                             27
D49V10, multiclass
        clus
vv       DEL PEAK 17(6Q22.31) MUTATED DEL PEAK 17(6Q22.31) WILD-TYPE
  CLUS_1                           17                             36
  CLUS_2                           40                            136
  CLUS_3                           24                             94

Clustering(50) Variable = Del Peak 18(6q26) mutation analysis
D50V1, multiclass
        clus
vv       DEL PEAK 18(6Q26) MUTATED DEL PEAK 18(6Q26) WILD-TYPE
  CLUS_1                         9                          34
  CLUS_2                        20                          30
  CLUS_3                         5                          25
  CLUS_4                         6                          25
D50V2, multiclass
        clus
vv       DEL PEAK 18(6Q26) MUTATED DEL PEAK 18(6Q26) WILD-TYPE
  CLUS_1                         4                          24
  CLUS_2                        23                          31
  CLUS_3                        13                          59
D50V3, multiclass
        clus
vv       DEL PEAK 18(6Q26) MUTATED DEL PEAK 18(6Q26) WILD-TYPE
  CLUS_1                        29                         114
  CLUS_2                        48                          81
  CLUS_3                        26                          99
D50V4, multiclass
        clus
vv       DEL PEAK 18(6Q26) MUTATED DEL PEAK 18(6Q26) WILD-TYPE
  CLUS_1                        20                          78
  CLUS_2                        35                          48
  CLUS_3                        12                          57
D50V5, multiclass
        clus
vv       DEL PEAK 18(6Q26) MUTATED DEL PEAK 18(6Q26) WILD-TYPE
  CLUS_1                        19                          41
  CLUS_2                        21                          52
  CLUS_3                        17                          44
D50V6, multiclass
        clus
vv       DEL PEAK 18(6Q26) MUTATED DEL PEAK 18(6Q26) WILD-TYPE
  CLUS_1                        17                          41
  CLUS_2                        11                          36
  CLUS_3                        17                          32
  CLUS_4                        12                          28
D50V7, multiclass
        clus
vv       DEL PEAK 18(6Q26) MUTATED DEL PEAK 18(6Q26) WILD-TYPE
  CLUS_1                        11                          49
  CLUS_2                        31                          49
  CLUS_3                        23                          56
  CLUS_4                        10                          28
D50V8, multiclass
        clus
vv       DEL PEAK 18(6Q26) MUTATED DEL PEAK 18(6Q26) WILD-TYPE
  CLUS_1                        29                          87
  CLUS_2                        32                          54
  CLUS_3                        14                          41
D50V9, multiclass
        clus
vv       DEL PEAK 18(6Q26) MUTATED DEL PEAK 18(6Q26) WILD-TYPE
  CLUS_1                        43                         100
  CLUS_2                        34                         131
  CLUS_3                        11                          28
D50V10, multiclass
        clus
vv       DEL PEAK 18(6Q26) MUTATED DEL PEAK 18(6Q26) WILD-TYPE
  CLUS_1                        20                          33
  CLUS_2                        41                         135
  CLUS_3                        27                          91

Clustering(51) Variable = Del Peak 19(7q11.22) mutation analysis
D51V1, multiclass
        clus
vv       DEL PEAK 19(7Q11.22) MUTATED DEL PEAK 19(7Q11.22) WILD-TYPE
  CLUS_1                            4                             39
  CLUS_2                            3                             47
  CLUS_3                            2                             28
  CLUS_4                            3                             28
D51V2, multiclass
        clus
vv       DEL PEAK 19(7Q11.22) MUTATED DEL PEAK 19(7Q11.22) WILD-TYPE
  CLUS_1                            4                             24
  CLUS_2                            3                             51
  CLUS_3                            5                             67
D51V3, multiclass
        clus
vv       DEL PEAK 19(7Q11.22) MUTATED DEL PEAK 19(7Q11.22) WILD-TYPE
  CLUS_1                           11                            132
  CLUS_2                            3                            126
  CLUS_3                           23                            102
D51V4, multiclass
        clus
vv       DEL PEAK 19(7Q11.22) MUTATED DEL PEAK 19(7Q11.22) WILD-TYPE
  CLUS_1                           11                             87
  CLUS_2                            7                             76
  CLUS_3                            6                             63
D51V5, multiclass
        clus
vv       DEL PEAK 19(7Q11.22) MUTATED DEL PEAK 19(7Q11.22) WILD-TYPE
  CLUS_1                            7                             53
  CLUS_2                            8                             65
  CLUS_3                            6                             55
D51V6, multiclass
        clus
vv       DEL PEAK 19(7Q11.22) MUTATED DEL PEAK 19(7Q11.22) WILD-TYPE
  CLUS_1                            8                             50
  CLUS_2                            4                             43
  CLUS_3                            6                             43
  CLUS_4                            3                             37
D51V7, multiclass
        clus
vv       DEL PEAK 19(7Q11.22) MUTATED DEL PEAK 19(7Q11.22) WILD-TYPE
  CLUS_1                            3                             57
  CLUS_2                            4                             76
  CLUS_3                           13                             66
  CLUS_4                            5                             33
D51V8, multiclass
        clus
vv       DEL PEAK 19(7Q11.22) MUTATED DEL PEAK 19(7Q11.22) WILD-TYPE
  CLUS_1                           10                            106
  CLUS_2                            5                             81
  CLUS_3                           10                             45
D51V9, multiclass
        clus
vv       DEL PEAK 19(7Q11.22) MUTATED DEL PEAK 19(7Q11.22) WILD-TYPE
  CLUS_1                           12                            131
  CLUS_2                           17                            148
  CLUS_3                            4                             35
D51V10, multiclass
        clus
vv       DEL PEAK 19(7Q11.22) MUTATED DEL PEAK 19(7Q11.22) WILD-TYPE
  CLUS_1                            4                             49
  CLUS_2                           20                            156
  CLUS_3                            9                            109

Clustering(52) Variable = Del Peak 20(7q36.3) mutation analysis
D52V1, multiclass
        clus
vv       DEL PEAK 20(7Q36.3) MUTATED DEL PEAK 20(7Q36.3) WILD-TYPE
  CLUS_1                          12                            31
  CLUS_2                           6                            44
  CLUS_3                           8                            22
  CLUS_4                           5                            26
D52V2, multiclass
        clus
vv       DEL PEAK 20(7Q36.3) MUTATED DEL PEAK 20(7Q36.3) WILD-TYPE
  CLUS_1                           7                            21
  CLUS_2                           6                            48
  CLUS_3                          18                            54
D52V3, multiclass
        clus
vv       DEL PEAK 20(7Q36.3) MUTATED DEL PEAK 20(7Q36.3) WILD-TYPE
  CLUS_1                          34                           109
  CLUS_2                          13                           116
  CLUS_3                          34                            91
D52V4, multiclass
        clus
vv       DEL PEAK 20(7Q36.3) MUTATED DEL PEAK 20(7Q36.3) WILD-TYPE
  CLUS_1                          23                            75
  CLUS_2                          12                            71
  CLUS_3                          15                            54
D52V5, multiclass
        clus
vv       DEL PEAK 20(7Q36.3) MUTATED DEL PEAK 20(7Q36.3) WILD-TYPE
  CLUS_1                          12                            48
  CLUS_2                          15                            58
  CLUS_3                          12                            49
D52V6, multiclass
        clus
vv       DEL PEAK 20(7Q36.3) MUTATED DEL PEAK 20(7Q36.3) WILD-TYPE
  CLUS_1                          16                            42
  CLUS_2                           8                            39
  CLUS_3                          10                            39
  CLUS_4                           5                            35
D52V7, multiclass
        clus
vv       DEL PEAK 20(7Q36.3) MUTATED DEL PEAK 20(7Q36.3) WILD-TYPE
  CLUS_1                          13                            47
  CLUS_2                           9                            71
  CLUS_3                          21                            58
  CLUS_4                           7                            31
D52V8, multiclass
        clus
vv       DEL PEAK 20(7Q36.3) MUTATED DEL PEAK 20(7Q36.3) WILD-TYPE
  CLUS_1                          28                            88
  CLUS_2                          10                            76
  CLUS_3                          12                            43
D52V9, multiclass
        clus
vv       DEL PEAK 20(7Q36.3) MUTATED DEL PEAK 20(7Q36.3) WILD-TYPE
  CLUS_1                          30                           113
  CLUS_2                          34                           131
  CLUS_3                           3                            36
D52V10, multiclass
        clus
vv       DEL PEAK 20(7Q36.3) MUTATED DEL PEAK 20(7Q36.3) WILD-TYPE
  CLUS_1                           6                            47
  CLUS_2                          33                           143
  CLUS_3                          28                            90

Clustering(53) Variable = Del Peak 21(8p23.2) mutation analysis
D53V1, multiclass
        clus
vv       DEL PEAK 21(8P23.2) MUTATED DEL PEAK 21(8P23.2) WILD-TYPE
  CLUS_1                          28                            15
  CLUS_2                          36                            14
  CLUS_3                          20                            10
  CLUS_4                          20                            11
D53V2, multiclass
        clus
vv       DEL PEAK 21(8P23.2) MUTATED DEL PEAK 21(8P23.2) WILD-TYPE
  CLUS_1                          21                             7
  CLUS_2                          38                            16
  CLUS_3                          45                            27
D53V3, multiclass
        clus
vv       DEL PEAK 21(8P23.2) MUTATED DEL PEAK 21(8P23.2) WILD-TYPE
  CLUS_1                          80                            63
  CLUS_2                          91                            38
  CLUS_3                          96                            29
D53V4, multiclass
        clus
vv       DEL PEAK 21(8P23.2) MUTATED DEL PEAK 21(8P23.2) WILD-TYPE
  CLUS_1                          59                            39
  CLUS_2                          61                            22
  CLUS_3                          46                            23
D53V5, multiclass
        clus
vv       DEL PEAK 21(8P23.2) MUTATED DEL PEAK 21(8P23.2) WILD-TYPE
  CLUS_1                          44                            16
  CLUS_2                          53                            20
  CLUS_3                          38                            23
D53V6, multiclass
        clus
vv       DEL PEAK 21(8P23.2) MUTATED DEL PEAK 21(8P23.2) WILD-TYPE
  CLUS_1                          41                            17
  CLUS_2                          34                            13
  CLUS_3                          38                            11
  CLUS_4                          22                            18
D53V7, multiclass
        clus
vv       DEL PEAK 21(8P23.2) MUTATED DEL PEAK 21(8P23.2) WILD-TYPE
  CLUS_1                          36                            24
  CLUS_2                          62                            18
  CLUS_3                          54                            25
  CLUS_4                          25                            13
D53V8, multiclass
        clus
vv       DEL PEAK 21(8P23.2) MUTATED DEL PEAK 21(8P23.2) WILD-TYPE
  CLUS_1                          76                            40
  CLUS_2                          67                            19
  CLUS_3                          34                            21
D53V9, multiclass
        clus
vv       DEL PEAK 21(8P23.2) MUTATED DEL PEAK 21(8P23.2) WILD-TYPE
  CLUS_1                         102                            41
  CLUS_2                         105                            60
  CLUS_3                          27                            12
D53V10, multiclass
        clus
vv       DEL PEAK 21(8P23.2) MUTATED DEL PEAK 21(8P23.2) WILD-TYPE
  CLUS_1                          35                            18
  CLUS_2                         113                            63
  CLUS_3                          86                            32

Clustering(54) Variable = Del Peak 22(9p23) mutation analysis
D54V1, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        37                           6
  CLUS_2                        28                          22
  CLUS_3                        19                          11
  CLUS_4                        17                          14
D54V2, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        14                          14
  CLUS_2                        30                          24
  CLUS_3                        57                          15
D54V3, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        74                          69
  CLUS_2                        75                          54
  CLUS_3                       109                          16
D54V4, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        57                          41
  CLUS_2                        56                          27
  CLUS_3                        51                          18
D54V5, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        32                          28
  CLUS_2                        47                          26
  CLUS_3                        43                          18
D54V6, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        30                          28
  CLUS_2                        33                          14
  CLUS_3                        33                          16
  CLUS_4                        26                          14
D54V7, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        47                          13
  CLUS_2                        45                          35
  CLUS_3                        53                          26
  CLUS_4                        21                          17
D54V8, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        82                          34
  CLUS_2                        48                          38
  CLUS_3                        36                          19
D54V9, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        95                          48
  CLUS_2                       111                          54
  CLUS_3                        26                          13
D54V10, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        31                          22
  CLUS_2                       113                          63
  CLUS_3                        88                          30

Clustering(55) Variable = Del Peak 23(9p21.3) mutation analysis
D55V1, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          36                             7
  CLUS_2                          37                            13
  CLUS_3                          21                             9
  CLUS_4                          21                            10
D55V2, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          17                            11
  CLUS_2                          41                            13
  CLUS_3                          57                            15
D55V3, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          92                            51
  CLUS_2                          96                            33
  CLUS_3                         114                            11
D55V4, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          72                            26
  CLUS_2                          67                            16
  CLUS_3                          56                            13
D55V5, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          45                            15
  CLUS_2                          53                            20
  CLUS_3                          48                            13
D55V6, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          40                            18
  CLUS_2                          39                             8
  CLUS_3                          38                            11
  CLUS_4                          29                            11
D55V7, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          51                             9
  CLUS_2                          59                            21
  CLUS_3                          60                            19
  CLUS_4                          25                            13
D55V8, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          90                            26
  CLUS_2                          64                            22
  CLUS_3                          41                            14
D55V9, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                         110                            33
  CLUS_2                         129                            36
  CLUS_3                          32                             7
D55V10, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          38                            15
  CLUS_2                         136                            40
  CLUS_3                          97                            21

Clustering(56) Variable = Del Peak 24(9q21.11) mutation analysis
D56V1, multiclass
        clus
vv       DEL PEAK 24(9Q21.11) MUTATED DEL PEAK 24(9Q21.11) WILD-TYPE
  CLUS_1                           28                             15
  CLUS_2                           12                             38
  CLUS_3                           19                             11
  CLUS_4                           15                             16
D56V2, multiclass
        clus
vv       DEL PEAK 24(9Q21.11) MUTATED DEL PEAK 24(9Q21.11) WILD-TYPE
  CLUS_1                           16                             12
  CLUS_2                           13                             41
  CLUS_3                           45                             27
D56V3, multiclass
        clus
vv       DEL PEAK 24(9Q21.11) MUTATED DEL PEAK 24(9Q21.11) WILD-TYPE
  CLUS_1                           69                             74
  CLUS_2                           35                             94
  CLUS_3                           87                             38
D56V4, multiclass
        clus
vv       DEL PEAK 24(9Q21.11) MUTATED DEL PEAK 24(9Q21.11) WILD-TYPE
  CLUS_1                           54                             44
  CLUS_2                           22                             61
  CLUS_3                           46                             23
D56V5, multiclass
        clus
vv       DEL PEAK 24(9Q21.11) MUTATED DEL PEAK 24(9Q21.11) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           37                             36
  CLUS_3                           26                             35
D56V6, multiclass
        clus
vv       DEL PEAK 24(9Q21.11) MUTATED DEL PEAK 24(9Q21.11) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           21                             26
  CLUS_3                           29                             20
  CLUS_4                           19                             21
D56V7, multiclass
        clus
vv       DEL PEAK 24(9Q21.11) MUTATED DEL PEAK 24(9Q21.11) WILD-TYPE
  CLUS_1                           33                             27
  CLUS_2                           19                             61
  CLUS_3                           48                             31
  CLUS_4                           22                             16
D56V8, multiclass
        clus
vv       DEL PEAK 24(9Q21.11) MUTATED DEL PEAK 24(9Q21.11) WILD-TYPE
  CLUS_1                           64                             52
  CLUS_2                           21                             65
  CLUS_3                           37                             18
D56V9, multiclass
        clus
vv       DEL PEAK 24(9Q21.11) MUTATED DEL PEAK 24(9Q21.11) WILD-TYPE
  CLUS_1                           68                             75
  CLUS_2                           89                             76
  CLUS_3                           13                             26
D56V10, multiclass
        clus
vv       DEL PEAK 24(9Q21.11) MUTATED DEL PEAK 24(9Q21.11) WILD-TYPE
  CLUS_1                           13                             40
  CLUS_2                           90                             86
  CLUS_3                           67                             51

Clustering(57) Variable = Del Peak 25(10p15.3) mutation analysis
D57V1, multiclass
        clus
vv       DEL PEAK 25(10P15.3) MUTATED DEL PEAK 25(10P15.3) WILD-TYPE
  CLUS_1                           17                             26
  CLUS_2                           25                             25
  CLUS_3                           10                             20
  CLUS_4                           16                             15
D57V2, multiclass
        clus
vv       DEL PEAK 25(10P15.3) MUTATED DEL PEAK 25(10P15.3) WILD-TYPE
  CLUS_1                           13                             15
  CLUS_2                           27                             27
  CLUS_3                           28                             44
D57V3, multiclass
        clus
vv       DEL PEAK 25(10P15.3) MUTATED DEL PEAK 25(10P15.3) WILD-TYPE
  CLUS_1                           45                             98
  CLUS_2                           75                             54
  CLUS_3                           58                             67
D57V4, multiclass
        clus
vv       DEL PEAK 25(10P15.3) MUTATED DEL PEAK 25(10P15.3) WILD-TYPE
  CLUS_1                           34                             64
  CLUS_2                           54                             29
  CLUS_3                           27                             42
D57V5, multiclass
        clus
vv       DEL PEAK 25(10P15.3) MUTATED DEL PEAK 25(10P15.3) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           28                             45
  CLUS_3                           31                             30
D57V6, multiclass
        clus
vv       DEL PEAK 25(10P15.3) MUTATED DEL PEAK 25(10P15.3) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           25                             22
  CLUS_3                           21                             28
  CLUS_4                           15                             25
D57V7, multiclass
        clus
vv       DEL PEAK 25(10P15.3) MUTATED DEL PEAK 25(10P15.3) WILD-TYPE
  CLUS_1                           18                             42
  CLUS_2                           47                             33
  CLUS_3                           33                             46
  CLUS_4                           13                             25
D57V8, multiclass
        clus
vv       DEL PEAK 25(10P15.3) MUTATED DEL PEAK 25(10P15.3) WILD-TYPE
  CLUS_1                           40                             76
  CLUS_2                           47                             39
  CLUS_3                           24                             31
D57V9, multiclass
        clus
vv       DEL PEAK 25(10P15.3) MUTATED DEL PEAK 25(10P15.3) WILD-TYPE
  CLUS_1                           67                             76
  CLUS_2                           68                             97
  CLUS_3                           23                             16
D57V10, multiclass
        clus
vv       DEL PEAK 25(10P15.3) MUTATED DEL PEAK 25(10P15.3) WILD-TYPE
  CLUS_1                           32                             21
  CLUS_2                           65                            111
  CLUS_3                           61                             57

Clustering(58) Variable = Del Peak 26(10p15.1) mutation analysis
D58V1, multiclass
        clus
vv       DEL PEAK 26(10P15.1) MUTATED DEL PEAK 26(10P15.1) WILD-TYPE
  CLUS_1                           15                             28
  CLUS_2                           26                             24
  CLUS_3                            8                             22
  CLUS_4                           16                             15
D58V2, multiclass
        clus
vv       DEL PEAK 26(10P15.1) MUTATED DEL PEAK 26(10P15.1) WILD-TYPE
  CLUS_1                           12                             16
  CLUS_2                           26                             28
  CLUS_3                           27                             45
D58V3, multiclass
        clus
vv       DEL PEAK 26(10P15.1) MUTATED DEL PEAK 26(10P15.1) WILD-TYPE
  CLUS_1                           43                            100
  CLUS_2                           71                             58
  CLUS_3                           54                             71
D58V4, multiclass
        clus
vv       DEL PEAK 26(10P15.1) MUTATED DEL PEAK 26(10P15.1) WILD-TYPE
  CLUS_1                           32                             66
  CLUS_2                           55                             28
  CLUS_3                           23                             46
D58V5, multiclass
        clus
vv       DEL PEAK 26(10P15.1) MUTATED DEL PEAK 26(10P15.1) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           26                             47
  CLUS_3                           28                             33
D58V6, multiclass
        clus
vv       DEL PEAK 26(10P15.1) MUTATED DEL PEAK 26(10P15.1) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           24                             23
  CLUS_3                           19                             30
  CLUS_4                           13                             27
D58V7, multiclass
        clus
vv       DEL PEAK 26(10P15.1) MUTATED DEL PEAK 26(10P15.1) WILD-TYPE
  CLUS_1                           17                             43
  CLUS_2                           48                             32
  CLUS_3                           32                             47
  CLUS_4                           10                             28
D58V8, multiclass
        clus
vv       DEL PEAK 26(10P15.1) MUTATED DEL PEAK 26(10P15.1) WILD-TYPE
  CLUS_1                           38                             78
  CLUS_2                           46                             40
  CLUS_3                           23                             32
D58V9, multiclass
        clus
vv       DEL PEAK 26(10P15.1) MUTATED DEL PEAK 26(10P15.1) WILD-TYPE
  CLUS_1                           64                             79
  CLUS_2                           62                            103
  CLUS_3                           23                             16
D58V10, multiclass
        clus
vv       DEL PEAK 26(10P15.1) MUTATED DEL PEAK 26(10P15.1) WILD-TYPE
  CLUS_1                           32                             21
  CLUS_2                           63                            113
  CLUS_3                           54                             64

Clustering(59) Variable = Del Peak 27(10q23.31) mutation analysis
D59V1, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            18                              25
  CLUS_2                            34                              16
  CLUS_3                            13                              17
  CLUS_4                            14                              17
D59V2, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            14                              14
  CLUS_2                            37                              17
  CLUS_3                            28                              44
D59V3, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            58                              85
  CLUS_2                            87                              42
  CLUS_3                            58                              67
D59V4, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            34                              64
  CLUS_2                            60                              23
  CLUS_3                            33                              36
D59V5, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            31                              29
  CLUS_2                            31                              42
  CLUS_3                            33                              28
D59V6, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            25                              33
  CLUS_2                            28                              19
  CLUS_3                            23                              26
  CLUS_4                            19                              21
D59V7, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            22                              38
  CLUS_2                            57                              23
  CLUS_3                            35                              44
  CLUS_4                            16                              22
D59V8, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            42                              74
  CLUS_2                            59                              27
  CLUS_3                            29                              26
D59V9, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            72                              71
  CLUS_2                            81                              84
  CLUS_3                            23                              16
D59V10, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            34                              19
  CLUS_2                            77                              99
  CLUS_3                            65                              53

Clustering(60) Variable = Del Peak 28(11p15.5) mutation analysis
D60V1, multiclass
        clus
vv       DEL PEAK 28(11P15.5) MUTATED DEL PEAK 28(11P15.5) WILD-TYPE
  CLUS_1                           31                             12
  CLUS_2                           19                             31
  CLUS_3                            9                             21
  CLUS_4                           18                             13
D60V2, multiclass
        clus
vv       DEL PEAK 28(11P15.5) MUTATED DEL PEAK 28(11P15.5) WILD-TYPE
  CLUS_1                           17                             11
  CLUS_2                           20                             34
  CLUS_3                           40                             32
D60V3, multiclass
        clus
vv       DEL PEAK 28(11P15.5) MUTATED DEL PEAK 28(11P15.5) WILD-TYPE
  CLUS_1                           49                             94
  CLUS_2                           53                             76
  CLUS_3                           81                             44
D60V4, multiclass
        clus
vv       DEL PEAK 28(11P15.5) MUTATED DEL PEAK 28(11P15.5) WILD-TYPE
  CLUS_1                           40                             58
  CLUS_2                           32                             51
  CLUS_3                           40                             29
D60V5, multiclass
        clus
vv       DEL PEAK 28(11P15.5) MUTATED DEL PEAK 28(11P15.5) WILD-TYPE
  CLUS_1                           32                             28
  CLUS_2                           43                             30
  CLUS_3                           17                             44
D60V6, multiclass
        clus
vv       DEL PEAK 28(11P15.5) MUTATED DEL PEAK 28(11P15.5) WILD-TYPE
  CLUS_1                           29                             29
  CLUS_2                           17                             30
  CLUS_3                           36                             13
  CLUS_4                           10                             30
D60V7, multiclass
        clus
vv       DEL PEAK 28(11P15.5) MUTATED DEL PEAK 28(11P15.5) WILD-TYPE
  CLUS_1                           34                             26
  CLUS_2                           30                             50
  CLUS_3                           47                             32
  CLUS_4                           16                             22
D60V8, multiclass
        clus
vv       DEL PEAK 28(11P15.5) MUTATED DEL PEAK 28(11P15.5) WILD-TYPE
  CLUS_1                           62                             54
  CLUS_2                           33                             53
  CLUS_3                           32                             23
D60V9, multiclass
        clus
vv       DEL PEAK 28(11P15.5) MUTATED DEL PEAK 28(11P15.5) WILD-TYPE
  CLUS_1                           76                             67
  CLUS_2                           80                             85
  CLUS_3                           12                             27
D60V10, multiclass
        clus
vv       DEL PEAK 28(11P15.5) MUTATED DEL PEAK 28(11P15.5) WILD-TYPE
  CLUS_1                           18                             35
  CLUS_2                           90                             86
  CLUS_3                           60                             58

Clustering(61) Variable = Del Peak 29(11q22.1) mutation analysis
D61V1, multiclass
        clus
vv       DEL PEAK 29(11Q22.1) MUTATED DEL PEAK 29(11Q22.1) WILD-TYPE
  CLUS_1                           10                             33
  CLUS_2                           17                             33
  CLUS_3                            8                             22
  CLUS_4                            6                             25
D61V2, multiclass
        clus
vv       DEL PEAK 29(11Q22.1) MUTATED DEL PEAK 29(11Q22.1) WILD-TYPE
  CLUS_1                            4                             24
  CLUS_2                           16                             38
  CLUS_3                           21                             51
D61V3, multiclass
        clus
vv       DEL PEAK 29(11Q22.1) MUTATED DEL PEAK 29(11Q22.1) WILD-TYPE
  CLUS_1                           29                            114
  CLUS_2                           48                             81
  CLUS_3                           41                             84
D61V4, multiclass
        clus
vv       DEL PEAK 29(11Q22.1) MUTATED DEL PEAK 29(11Q22.1) WILD-TYPE
  CLUS_1                           22                             76
  CLUS_2                           31                             52
  CLUS_3                           27                             42
D61V5, multiclass
        clus
vv       DEL PEAK 29(11Q22.1) MUTATED DEL PEAK 29(11Q22.1) WILD-TYPE
  CLUS_1                           20                             40
  CLUS_2                           18                             55
  CLUS_3                           10                             51
D61V6, multiclass
        clus
vv       DEL PEAK 29(11Q22.1) MUTATED DEL PEAK 29(11Q22.1) WILD-TYPE
  CLUS_1                           15                             43
  CLUS_2                           11                             36
  CLUS_3                           12                             37
  CLUS_4                           10                             30
D61V7, multiclass
        clus
vv       DEL PEAK 29(11Q22.1) MUTATED DEL PEAK 29(11Q22.1) WILD-TYPE
  CLUS_1                           13                             47
  CLUS_2                           27                             53
  CLUS_3                           22                             57
  CLUS_4                            7                             31
D61V8, multiclass
        clus
vv       DEL PEAK 29(11Q22.1) MUTATED DEL PEAK 29(11Q22.1) WILD-TYPE
  CLUS_1                           27                             89
  CLUS_2                           27                             59
  CLUS_3                           15                             40
D61V9, multiclass
        clus
vv       DEL PEAK 29(11Q22.1) MUTATED DEL PEAK 29(11Q22.1) WILD-TYPE
  CLUS_1                           38                            105
  CLUS_2                           51                            114
  CLUS_3                           16                             23
D61V10, multiclass
        clus
vv       DEL PEAK 29(11Q22.1) MUTATED DEL PEAK 29(11Q22.1) WILD-TYPE
  CLUS_1                           23                             30
  CLUS_2                           46                            130
  CLUS_3                           36                             82

Clustering(62) Variable = Del Peak 30(11q25) mutation analysis
D62V1, multiclass
        clus
vv       DEL PEAK 30(11Q25) MUTATED DEL PEAK 30(11Q25) WILD-TYPE
  CLUS_1                         15                           28
  CLUS_2                         20                           30
  CLUS_3                         11                           19
  CLUS_4                          9                           22
D62V2, multiclass
        clus
vv       DEL PEAK 30(11Q25) MUTATED DEL PEAK 30(11Q25) WILD-TYPE
  CLUS_1                          7                           21
  CLUS_2                         20                           34
  CLUS_3                         28                           44
D62V3, multiclass
        clus
vv       DEL PEAK 30(11Q25) MUTATED DEL PEAK 30(11Q25) WILD-TYPE
  CLUS_1                         42                          101
  CLUS_2                         55                           74
  CLUS_3                         46                           79
D62V4, multiclass
        clus
vv       DEL PEAK 30(11Q25) MUTATED DEL PEAK 30(11Q25) WILD-TYPE
  CLUS_1                         30                           68
  CLUS_2                         34                           49
  CLUS_3                         26                           43
D62V5, multiclass
        clus
vv       DEL PEAK 30(11Q25) MUTATED DEL PEAK 30(11Q25) WILD-TYPE
  CLUS_1                         25                           35
  CLUS_2                         21                           52
  CLUS_3                         15                           46
D62V6, multiclass
        clus
vv       DEL PEAK 30(11Q25) MUTATED DEL PEAK 30(11Q25) WILD-TYPE
  CLUS_1                         20                           38
  CLUS_2                         15                           32
  CLUS_3                         15                           34
  CLUS_4                         11                           29
D62V7, multiclass
        clus
vv       DEL PEAK 30(11Q25) MUTATED DEL PEAK 30(11Q25) WILD-TYPE
  CLUS_1                         17                           43
  CLUS_2                         33                           47
  CLUS_3                         30                           49
  CLUS_4                         13                           25
D62V8, multiclass
        clus
vv       DEL PEAK 30(11Q25) MUTATED DEL PEAK 30(11Q25) WILD-TYPE
  CLUS_1                         37                           79
  CLUS_2                         35                           51
  CLUS_3                         21                           34
D62V9, multiclass
        clus
vv       DEL PEAK 30(11Q25) MUTATED DEL PEAK 30(11Q25) WILD-TYPE
  CLUS_1                         45                           98
  CLUS_2                         60                          105
  CLUS_3                         19                           20
D62V10, multiclass
        clus
vv       DEL PEAK 30(11Q25) MUTATED DEL PEAK 30(11Q25) WILD-TYPE
  CLUS_1                         24                           29
  CLUS_2                         56                          120
  CLUS_3                         44                           74

Clustering(63) Variable = Del Peak 31(12q24.31) mutation analysis
D63V1, multiclass
        clus
vv       DEL PEAK 31(12Q24.31) MUTATED DEL PEAK 31(12Q24.31) WILD-TYPE
  CLUS_1                             5                              38
  CLUS_2                             8                              42
  CLUS_3                             4                              26
  CLUS_4                             4                              27
D63V2, multiclass
        clus
vv       DEL PEAK 31(12Q24.31) MUTATED DEL PEAK 31(12Q24.31) WILD-TYPE
  CLUS_1                             4                              24
  CLUS_2                            10                              44
  CLUS_3                             7                              65
D63V3, multiclass
        clus
vv       DEL PEAK 31(12Q24.31) MUTATED DEL PEAK 31(12Q24.31) WILD-TYPE
  CLUS_1                            19                             124
  CLUS_2                            20                             109
  CLUS_3                            24                             101
D63V4, multiclass
        clus
vv       DEL PEAK 31(12Q24.31) MUTATED DEL PEAK 31(12Q24.31) WILD-TYPE
  CLUS_1                            15                              83
  CLUS_2                            12                              71
  CLUS_3                            15                              54
D63V5, multiclass
        clus
vv       DEL PEAK 31(12Q24.31) MUTATED DEL PEAK 31(12Q24.31) WILD-TYPE
  CLUS_1                             6                              54
  CLUS_2                            10                              63
  CLUS_3                            12                              49
D63V6, multiclass
        clus
vv       DEL PEAK 31(12Q24.31) MUTATED DEL PEAK 31(12Q24.31) WILD-TYPE
  CLUS_1                             4                              54
  CLUS_2                             9                              38
  CLUS_3                             9                              40
  CLUS_4                             6                              34
D63V7, multiclass
        clus
vv       DEL PEAK 31(12Q24.31) MUTATED DEL PEAK 31(12Q24.31) WILD-TYPE
  CLUS_1                            11                              49
  CLUS_2                            12                              68
  CLUS_3                            14                              65
  CLUS_4                             5                              33
D63V8, multiclass
        clus
vv       DEL PEAK 31(12Q24.31) MUTATED DEL PEAK 31(12Q24.31) WILD-TYPE
  CLUS_1                            18                              98
  CLUS_2                            13                              73
  CLUS_3                            11                              44
D63V9, multiclass
        clus
vv       DEL PEAK 31(12Q24.31) MUTATED DEL PEAK 31(12Q24.31) WILD-TYPE
  CLUS_1                            19                             124
  CLUS_2                            31                             134
  CLUS_3                             4                              35
D63V10, multiclass
        clus
vv       DEL PEAK 31(12Q24.31) MUTATED DEL PEAK 31(12Q24.31) WILD-TYPE
  CLUS_1                             8                              45
  CLUS_2                            23                             153
  CLUS_3                            23                              95

Clustering(64) Variable = Del Peak 32(13q12.11) mutation analysis
D64V1, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            26                              17
  CLUS_2                            35                              15
  CLUS_3                            24                               6
  CLUS_4                            15                              16
D64V2, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            16                              12
  CLUS_2                            37                              17
  CLUS_3                            47                              25
D64V3, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            86                              57
  CLUS_2                            81                              48
  CLUS_3                            93                              32
D64V4, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            57                              41
  CLUS_2                            54                              29
  CLUS_3                            50                              19
D64V5, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            41                              19
  CLUS_2                            49                              24
  CLUS_3                            43                              18
D64V6, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            38                              20
  CLUS_2                            37                              10
  CLUS_3                            34                              15
  CLUS_4                            24                              16
D64V7, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            36                              24
  CLUS_2                            54                              26
  CLUS_3                            52                              27
  CLUS_4                            27                              11
D64V8, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            70                              46
  CLUS_2                            62                              24
  CLUS_3                            37                              18
D64V9, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            95                              48
  CLUS_2                           110                              55
  CLUS_3                            27                              12
D64V10, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            36                              17
  CLUS_2                           117                              59
  CLUS_3                            79                              39

Clustering(65) Variable = Del Peak 33(13q14.2) mutation analysis
D65V1, multiclass
        clus
vv       DEL PEAK 33(13Q14.2) MUTATED DEL PEAK 33(13Q14.2) WILD-TYPE
  CLUS_1                           28                             15
  CLUS_2                           29                             21
  CLUS_3                           26                              4
  CLUS_4                           22                              9
D65V2, multiclass
        clus
vv       DEL PEAK 33(13Q14.2) MUTATED DEL PEAK 33(13Q14.2) WILD-TYPE
  CLUS_1                           22                              6
  CLUS_2                           31                             23
  CLUS_3                           52                             20
D65V3, multiclass
        clus
vv       DEL PEAK 33(13Q14.2) MUTATED DEL PEAK 33(13Q14.2) WILD-TYPE
  CLUS_1                           88                             55
  CLUS_2                           82                             47
  CLUS_3                          101                             24
D65V4, multiclass
        clus
vv       DEL PEAK 33(13Q14.2) MUTATED DEL PEAK 33(13Q14.2) WILD-TYPE
  CLUS_1                           57                             41
  CLUS_2                           60                             23
  CLUS_3                           51                             18
D65V5, multiclass
        clus
vv       DEL PEAK 33(13Q14.2) MUTATED DEL PEAK 33(13Q14.2) WILD-TYPE
  CLUS_1                           43                             17
  CLUS_2                           49                             24
  CLUS_3                           45                             16
D65V6, multiclass
        clus
vv       DEL PEAK 33(13Q14.2) MUTATED DEL PEAK 33(13Q14.2) WILD-TYPE
  CLUS_1                           40                             18
  CLUS_2                           36                             11
  CLUS_3                           35                             14
  CLUS_4                           26                             14
D65V7, multiclass
        clus
vv       DEL PEAK 33(13Q14.2) MUTATED DEL PEAK 33(13Q14.2) WILD-TYPE
  CLUS_1                           35                             25
  CLUS_2                           48                             32
  CLUS_3                           61                             18
  CLUS_4                           29                              9
D65V8, multiclass
        clus
vv       DEL PEAK 33(13Q14.2) MUTATED DEL PEAK 33(13Q14.2) WILD-TYPE
  CLUS_1                           74                             42
  CLUS_2                           56                             30
  CLUS_3                           43                             12
D65V9, multiclass
        clus
vv       DEL PEAK 33(13Q14.2) MUTATED DEL PEAK 33(13Q14.2) WILD-TYPE
  CLUS_1                           97                             46
  CLUS_2                          116                             49
  CLUS_3                           27                             12
D65V10, multiclass
        clus
vv       DEL PEAK 33(13Q14.2) MUTATED DEL PEAK 33(13Q14.2) WILD-TYPE
  CLUS_1                           36                             17
  CLUS_2                          118                             58
  CLUS_3                           86                             32

Clustering(66) Variable = Del Peak 34(14q11.2) mutation analysis
D66V1, multiclass
        clus
vv       DEL PEAK 34(14Q11.2) MUTATED DEL PEAK 34(14Q11.2) WILD-TYPE
  CLUS_1                            8                             35
  CLUS_2                           20                             30
  CLUS_3                           13                             17
  CLUS_4                           13                             18
D66V2, multiclass
        clus
vv       DEL PEAK 34(14Q11.2) MUTATED DEL PEAK 34(14Q11.2) WILD-TYPE
  CLUS_1                           10                             18
  CLUS_2                           23                             31
  CLUS_3                           21                             51
D66V3, multiclass
        clus
vv       DEL PEAK 34(14Q11.2) MUTATED DEL PEAK 34(14Q11.2) WILD-TYPE
  CLUS_1                           42                            101
  CLUS_2                           48                             81
  CLUS_3                           50                             75
D66V4, multiclass
        clus
vv       DEL PEAK 34(14Q11.2) MUTATED DEL PEAK 34(14Q11.2) WILD-TYPE
  CLUS_1                           33                             65
  CLUS_2                           27                             56
  CLUS_3                           29                             40
D66V5, multiclass
        clus
vv       DEL PEAK 34(14Q11.2) MUTATED DEL PEAK 34(14Q11.2) WILD-TYPE
  CLUS_1                           27                             33
  CLUS_2                           22                             51
  CLUS_3                           24                             37
D66V6, multiclass
        clus
vv       DEL PEAK 34(14Q11.2) MUTATED DEL PEAK 34(14Q11.2) WILD-TYPE
  CLUS_1                           27                             31
  CLUS_2                           16                             31
  CLUS_3                           13                             36
  CLUS_4                           17                             23
D66V7, multiclass
        clus
vv       DEL PEAK 34(14Q11.2) MUTATED DEL PEAK 34(14Q11.2) WILD-TYPE
  CLUS_1                           12                             48
  CLUS_2                           30                             50
  CLUS_3                           40                             39
  CLUS_4                           13                             25
D66V8, multiclass
        clus
vv       DEL PEAK 34(14Q11.2) MUTATED DEL PEAK 34(14Q11.2) WILD-TYPE
  CLUS_1                           33                             83
  CLUS_2                           31                             55
  CLUS_3                           31                             24
D66V9, multiclass
        clus
vv       DEL PEAK 34(14Q11.2) MUTATED DEL PEAK 34(14Q11.2) WILD-TYPE
  CLUS_1                           51                             92
  CLUS_2                           53                            112
  CLUS_3                           18                             21
D66V10, multiclass
        clus
vv       DEL PEAK 34(14Q11.2) MUTATED DEL PEAK 34(14Q11.2) WILD-TYPE
  CLUS_1                           23                             30
  CLUS_2                           56                            120
  CLUS_3                           43                             75

Clustering(67) Variable = Del Peak 35(15q12) mutation analysis
D67V1, multiclass
        clus
vv       DEL PEAK 35(15Q12) MUTATED DEL PEAK 35(15Q12) WILD-TYPE
  CLUS_1                         15                           28
  CLUS_2                         20                           30
  CLUS_3                         12                           18
  CLUS_4                         15                           16
D67V2, multiclass
        clus
vv       DEL PEAK 35(15Q12) MUTATED DEL PEAK 35(15Q12) WILD-TYPE
  CLUS_1                         15                           13
  CLUS_2                         22                           32
  CLUS_3                         25                           47
D67V3, multiclass
        clus
vv       DEL PEAK 35(15Q12) MUTATED DEL PEAK 35(15Q12) WILD-TYPE
  CLUS_1                         43                          100
  CLUS_2                         48                           81
  CLUS_3                         40                           85
D67V4, multiclass
        clus
vv       DEL PEAK 35(15Q12) MUTATED DEL PEAK 35(15Q12) WILD-TYPE
  CLUS_1                         30                           68
  CLUS_2                         21                           62
  CLUS_3                         25                           44
D67V5, multiclass
        clus
vv       DEL PEAK 35(15Q12) MUTATED DEL PEAK 35(15Q12) WILD-TYPE
  CLUS_1                         29                           31
  CLUS_2                         24                           49
  CLUS_3                         18                           43
D67V6, multiclass
        clus
vv       DEL PEAK 35(15Q12) MUTATED DEL PEAK 35(15Q12) WILD-TYPE
  CLUS_1                         26                           32
  CLUS_2                         21                           26
  CLUS_3                         18                           31
  CLUS_4                          6                           34
D67V7, multiclass
        clus
vv       DEL PEAK 35(15Q12) MUTATED DEL PEAK 35(15Q12) WILD-TYPE
  CLUS_1                         18                           42
  CLUS_2                         27                           53
  CLUS_3                         36                           43
  CLUS_4                         10                           28
D67V8, multiclass
        clus
vv       DEL PEAK 35(15Q12) MUTATED DEL PEAK 35(15Q12) WILD-TYPE
  CLUS_1                         38                           78
  CLUS_2                         29                           57
  CLUS_3                         24                           31
D67V9, multiclass
        clus
vv       DEL PEAK 35(15Q12) MUTATED DEL PEAK 35(15Q12) WILD-TYPE
  CLUS_1                         58                           85
  CLUS_2                         49                          116
  CLUS_3                         10                           29
D67V10, multiclass
        clus
vv       DEL PEAK 35(15Q12) MUTATED DEL PEAK 35(15Q12) WILD-TYPE
  CLUS_1                         15                           38
  CLUS_2                         63                          113
  CLUS_3                         39                           79

Clustering(68) Variable = Del Peak 36(15q21.1) mutation analysis
D68V1, multiclass
        clus
vv       DEL PEAK 36(15Q21.1) MUTATED DEL PEAK 36(15Q21.1) WILD-TYPE
  CLUS_1                           14                             29
  CLUS_2                           16                             34
  CLUS_3                           11                             19
  CLUS_4                           14                             17
D68V2, multiclass
        clus
vv       DEL PEAK 36(15Q21.1) MUTATED DEL PEAK 36(15Q21.1) WILD-TYPE
  CLUS_1                           14                             14
  CLUS_2                           18                             36
  CLUS_3                           23                             49
D68V3, multiclass
        clus
vv       DEL PEAK 36(15Q21.1) MUTATED DEL PEAK 36(15Q21.1) WILD-TYPE
  CLUS_1                           38                            105
  CLUS_2                           45                             84
  CLUS_3                           41                             84
D68V4, multiclass
        clus
vv       DEL PEAK 36(15Q21.1) MUTATED DEL PEAK 36(15Q21.1) WILD-TYPE
  CLUS_1                           30                             68
  CLUS_2                           25                             58
  CLUS_3                           22                             47
D68V5, multiclass
        clus
vv       DEL PEAK 36(15Q21.1) MUTATED DEL PEAK 36(15Q21.1) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           24                             49
  CLUS_3                           16                             45
D68V6, multiclass
        clus
vv       DEL PEAK 36(15Q21.1) MUTATED DEL PEAK 36(15Q21.1) WILD-TYPE
  CLUS_1                           25                             33
  CLUS_2                           18                             29
  CLUS_3                           18                             31
  CLUS_4                            5                             35
D68V7, multiclass
        clus
vv       DEL PEAK 36(15Q21.1) MUTATED DEL PEAK 36(15Q21.1) WILD-TYPE
  CLUS_1                           17                             43
  CLUS_2                           23                             57
  CLUS_3                           33                             46
  CLUS_4                            9                             29
D68V8, multiclass
        clus
vv       DEL PEAK 36(15Q21.1) MUTATED DEL PEAK 36(15Q21.1) WILD-TYPE
  CLUS_1                           35                             81
  CLUS_2                           25                             61
  CLUS_3                           22                             33
D68V9, multiclass
        clus
vv       DEL PEAK 36(15Q21.1) MUTATED DEL PEAK 36(15Q21.1) WILD-TYPE
  CLUS_1                           52                             91
  CLUS_2                           49                            116
  CLUS_3                            9                             30
D68V10, multiclass
        clus
vv       DEL PEAK 36(15Q21.1) MUTATED DEL PEAK 36(15Q21.1) WILD-TYPE
  CLUS_1                           12                             41
  CLUS_2                           59                            117
  CLUS_3                           39                             79

Clustering(69) Variable = Del Peak 37(16p13.3) mutation analysis
D69V1, multiclass
        clus
vv       DEL PEAK 37(16P13.3) MUTATED DEL PEAK 37(16P13.3) WILD-TYPE
  CLUS_1                           16                             27
  CLUS_2                           21                             29
  CLUS_3                            6                             24
  CLUS_4                           11                             20
D69V2, multiclass
        clus
vv       DEL PEAK 37(16P13.3) MUTATED DEL PEAK 37(16P13.3) WILD-TYPE
  CLUS_1                            6                             22
  CLUS_2                           20                             34
  CLUS_3                           28                             44
D69V3, multiclass
        clus
vv       DEL PEAK 37(16P13.3) MUTATED DEL PEAK 37(16P13.3) WILD-TYPE
  CLUS_1                           39                            104
  CLUS_2                           52                             77
  CLUS_3                           57                             68
D69V4, multiclass
        clus
vv       DEL PEAK 37(16P13.3) MUTATED DEL PEAK 37(16P13.3) WILD-TYPE
  CLUS_1                           32                             66
  CLUS_2                           32                             51
  CLUS_3                           32                             37
D69V5, multiclass
        clus
vv       DEL PEAK 37(16P13.3) MUTATED DEL PEAK 37(16P13.3) WILD-TYPE
  CLUS_1                           27                             33
  CLUS_2                           26                             47
  CLUS_3                           17                             44
D69V6, multiclass
        clus
vv       DEL PEAK 37(16P13.3) MUTATED DEL PEAK 37(16P13.3) WILD-TYPE
  CLUS_1                           24                             34
  CLUS_2                           14                             33
  CLUS_3                           19                             30
  CLUS_4                           13                             27
D69V7, multiclass
        clus
vv       DEL PEAK 37(16P13.3) MUTATED DEL PEAK 37(16P13.3) WILD-TYPE
  CLUS_1                           17                             43
  CLUS_2                           30                             50
  CLUS_3                           30                             49
  CLUS_4                           11                             27
D69V8, multiclass
        clus
vv       DEL PEAK 37(16P13.3) MUTATED DEL PEAK 37(16P13.3) WILD-TYPE
  CLUS_1                           34                             82
  CLUS_2                           31                             55
  CLUS_3                           23                             32
D69V9, multiclass
        clus
vv       DEL PEAK 37(16P13.3) MUTATED DEL PEAK 37(16P13.3) WILD-TYPE
  CLUS_1                           47                             96
  CLUS_2                           63                            102
  CLUS_3                           14                             25
D69V10, multiclass
        clus
vv       DEL PEAK 37(16P13.3) MUTATED DEL PEAK 37(16P13.3) WILD-TYPE
  CLUS_1                           12                             41
  CLUS_2                           64                            112
  CLUS_3                           48                             70

Clustering(70) Variable = Del Peak 38(16q23.1) mutation analysis
D70V1, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           16                             27
  CLUS_2                           21                             29
  CLUS_3                           11                             19
  CLUS_4                           13                             18
D70V2, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           10                             18
  CLUS_2                           24                             30
  CLUS_3                           27                             45
D70V3, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           50                             93
  CLUS_2                           56                             73
  CLUS_3                           60                             65
D70V4, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           39                             59
  CLUS_2                           29                             54
  CLUS_3                           33                             36
D70V5, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           27                             46
  CLUS_3                           23                             38
D70V6, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           25                             33
  CLUS_2                           21                             26
  CLUS_3                           17                             32
  CLUS_4                           16                             24
D70V7, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           18                             42
  CLUS_2                           35                             45
  CLUS_3                           35                             44
  CLUS_4                           12                             26
D70V8, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           35                             81
  CLUS_2                           38                             48
  CLUS_3                           27                             28
D70V9, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           57                             86
  CLUS_2                           64                            101
  CLUS_3                           19                             20
D70V10, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           20                             33
  CLUS_2                           66                            110
  CLUS_3                           54                             64

Clustering(71) Variable = Del Peak 39(17p11.2) mutation analysis
D71V1, multiclass
        clus
vv       DEL PEAK 39(17P11.2) MUTATED DEL PEAK 39(17P11.2) WILD-TYPE
  CLUS_1                           30                             13
  CLUS_2                           25                             25
  CLUS_3                           15                             15
  CLUS_4                           16                             15
D71V2, multiclass
        clus
vv       DEL PEAK 39(17P11.2) MUTATED DEL PEAK 39(17P11.2) WILD-TYPE
  CLUS_1                           13                             15
  CLUS_2                           29                             25
  CLUS_3                           44                             28
D71V3, multiclass
        clus
vv       DEL PEAK 39(17P11.2) MUTATED DEL PEAK 39(17P11.2) WILD-TYPE
  CLUS_1                           64                             79
  CLUS_2                           58                             71
  CLUS_3                           80                             45
D71V4, multiclass
        clus
vv       DEL PEAK 39(17P11.2) MUTATED DEL PEAK 39(17P11.2) WILD-TYPE
  CLUS_1                           46                             52
  CLUS_2                           34                             49
  CLUS_3                           39                             30
D71V5, multiclass
        clus
vv       DEL PEAK 39(17P11.2) MUTATED DEL PEAK 39(17P11.2) WILD-TYPE
  CLUS_1                           35                             25
  CLUS_2                           34                             39
  CLUS_3                           25                             36
D71V6, multiclass
        clus
vv       DEL PEAK 39(17P11.2) MUTATED DEL PEAK 39(17P11.2) WILD-TYPE
  CLUS_1                           36                             22
  CLUS_2                           19                             28
  CLUS_3                           26                             23
  CLUS_4                           13                             27
D71V7, multiclass
        clus
vv       DEL PEAK 39(17P11.2) MUTATED DEL PEAK 39(17P11.2) WILD-TYPE
  CLUS_1                           34                             26
  CLUS_2                           36                             44
  CLUS_3                           41                             38
  CLUS_4                           23                             15
D71V8, multiclass
        clus
vv       DEL PEAK 39(17P11.2) MUTATED DEL PEAK 39(17P11.2) WILD-TYPE
  CLUS_1                           61                             55
  CLUS_2                           43                             43
  CLUS_3                           30                             25
D71V9, multiclass
        clus
vv       DEL PEAK 39(17P11.2) MUTATED DEL PEAK 39(17P11.2) WILD-TYPE
  CLUS_1                           85                             58
  CLUS_2                           79                             86
  CLUS_3                           17                             22
D71V10, multiclass
        clus
vv       DEL PEAK 39(17P11.2) MUTATED DEL PEAK 39(17P11.2) WILD-TYPE
  CLUS_1                           21                             32
  CLUS_2                          103                             73
  CLUS_3                           57                             61

Clustering(72) Variable = Del Peak 40(17q11.2) mutation analysis
D72V1, multiclass
        clus
vv       DEL PEAK 40(17Q11.2) MUTATED DEL PEAK 40(17Q11.2) WILD-TYPE
  CLUS_1                           21                             22
  CLUS_2                            3                             47
  CLUS_3                           11                             19
  CLUS_4                            7                             24
D72V2, multiclass
        clus
vv       DEL PEAK 40(17Q11.2) MUTATED DEL PEAK 40(17Q11.2) WILD-TYPE
  CLUS_1                            9                             19
  CLUS_2                            4                             50
  CLUS_3                           29                             43
D72V3, multiclass
        clus
vv       DEL PEAK 40(17Q11.2) MUTATED DEL PEAK 40(17Q11.2) WILD-TYPE
  CLUS_1                           40                            103
  CLUS_2                           10                            119
  CLUS_3                           46                             79
D72V4, multiclass
        clus
vv       DEL PEAK 40(17Q11.2) MUTATED DEL PEAK 40(17Q11.2) WILD-TYPE
  CLUS_1                           27                             71
  CLUS_2                           10                             73
  CLUS_3                           19                             50
D72V5, multiclass
        clus
vv       DEL PEAK 40(17Q11.2) MUTATED DEL PEAK 40(17Q11.2) WILD-TYPE
  CLUS_1                           11                             49
  CLUS_2                           20                             53
  CLUS_3                           15                             46
D72V6, multiclass
        clus
vv       DEL PEAK 40(17Q11.2) MUTATED DEL PEAK 40(17Q11.2) WILD-TYPE
  CLUS_1                           14                             44
  CLUS_2                            7                             40
  CLUS_3                           14                             35
  CLUS_4                           11                             29
D72V7, multiclass
        clus
vv       DEL PEAK 40(17Q11.2) MUTATED DEL PEAK 40(17Q11.2) WILD-TYPE
  CLUS_1                           20                             40
  CLUS_2                            6                             74
  CLUS_3                           23                             56
  CLUS_4                           13                             25
D72V8, multiclass
        clus
vv       DEL PEAK 40(17Q11.2) MUTATED DEL PEAK 40(17Q11.2) WILD-TYPE
  CLUS_1                           39                             77
  CLUS_2                            6                             80
  CLUS_3                           17                             38
D72V9, multiclass
        clus
vv       DEL PEAK 40(17Q11.2) MUTATED DEL PEAK 40(17Q11.2) WILD-TYPE
  CLUS_1                           42                            101
  CLUS_2                           38                            127
  CLUS_3                            9                             30
D72V10, multiclass
        clus
vv       DEL PEAK 40(17Q11.2) MUTATED DEL PEAK 40(17Q11.2) WILD-TYPE
  CLUS_1                            7                             46
  CLUS_2                           49                            127
  CLUS_3                           33                             85

Clustering(73) Variable = Del Peak 41(17q25.3) mutation analysis
D73V1, multiclass
        clus
vv       DEL PEAK 41(17Q25.3) MUTATED DEL PEAK 41(17Q25.3) WILD-TYPE
  CLUS_1                           16                             27
  CLUS_2                            5                             45
  CLUS_3                            7                             23
  CLUS_4                            3                             28
D73V2, multiclass
        clus
vv       DEL PEAK 41(17Q25.3) MUTATED DEL PEAK 41(17Q25.3) WILD-TYPE
  CLUS_1                            7                             21
  CLUS_2                            5                             49
  CLUS_3                           19                             53
D73V3, multiclass
        clus
vv       DEL PEAK 41(17Q25.3) MUTATED DEL PEAK 41(17Q25.3) WILD-TYPE
  CLUS_1                           26                            117
  CLUS_2                           13                            116
  CLUS_3                           37                             88
D73V4, multiclass
        clus
vv       DEL PEAK 41(17Q25.3) MUTATED DEL PEAK 41(17Q25.3) WILD-TYPE
  CLUS_1                           17                             81
  CLUS_2                           11                             72
  CLUS_3                           20                             49
D73V5, multiclass
        clus
vv       DEL PEAK 41(17Q25.3) MUTATED DEL PEAK 41(17Q25.3) WILD-TYPE
  CLUS_1                           12                             48
  CLUS_2                           17                             56
  CLUS_3                           10                             51
D73V6, multiclass
        clus
vv       DEL PEAK 41(17Q25.3) MUTATED DEL PEAK 41(17Q25.3) WILD-TYPE
  CLUS_1                           11                             47
  CLUS_2                           10                             37
  CLUS_3                           10                             39
  CLUS_4                            8                             32
D73V7, multiclass
        clus
vv       DEL PEAK 41(17Q25.3) MUTATED DEL PEAK 41(17Q25.3) WILD-TYPE
  CLUS_1                           15                             45
  CLUS_2                            9                             71
  CLUS_3                           18                             61
  CLUS_4                            8                             30
D73V8, multiclass
        clus
vv       DEL PEAK 41(17Q25.3) MUTATED DEL PEAK 41(17Q25.3) WILD-TYPE
  CLUS_1                           33                             83
  CLUS_2                            8                             78
  CLUS_3                            9                             46
D73V9, multiclass
        clus
vv       DEL PEAK 41(17Q25.3) MUTATED DEL PEAK 41(17Q25.3) WILD-TYPE
  CLUS_1                           30                            113
  CLUS_2                           35                            130
  CLUS_3                            7                             32
D73V10, multiclass
        clus
vv       DEL PEAK 41(17Q25.3) MUTATED DEL PEAK 41(17Q25.3) WILD-TYPE
  CLUS_1                            6                             47
  CLUS_2                           43                            133
  CLUS_3                           23                             95

Clustering(74) Variable = Del Peak 42(18q23) mutation analysis
D74V1, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         24                           19
  CLUS_2                         23                           27
  CLUS_3                         13                           17
  CLUS_4                         12                           19
D74V2, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         12                           16
  CLUS_2                         24                           30
  CLUS_3                         36                           36
D74V3, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         59                           84
  CLUS_2                         60                           69
  CLUS_3                         60                           65
D74V4, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         46                           52
  CLUS_2                         39                           44
  CLUS_3                         30                           39
D74V5, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         26                           34
  CLUS_2                         33                           40
  CLUS_3                         30                           31
D74V6, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         23                           35
  CLUS_2                         25                           22
  CLUS_3                         25                           24
  CLUS_4                         16                           24
D74V7, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         28                           32
  CLUS_2                         35                           45
  CLUS_3                         27                           52
  CLUS_4                         20                           18
D74V8, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         57                           59
  CLUS_2                         35                           51
  CLUS_3                         18                           37
D74V9, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         69                           74
  CLUS_2                         73                           92
  CLUS_3                         18                           21
D74V10, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         25                           28
  CLUS_2                         76                          100
  CLUS_3                         59                           59

Clustering(75) Variable = Del Peak 43(19p13.3) mutation analysis
D75V1, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           20                             23
  CLUS_2                           20                             30
  CLUS_3                           17                             13
  CLUS_4                           18                             13
D75V2, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           20                              8
  CLUS_2                           22                             32
  CLUS_3                           33                             39
D75V3, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           48                             95
  CLUS_2                           49                             80
  CLUS_3                           76                             49
D75V4, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           35                             63
  CLUS_2                           37                             46
  CLUS_3                           35                             34
D75V5, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           39                             34
  CLUS_3                           21                             40
D75V6, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           25                             33
  CLUS_2                           21                             26
  CLUS_3                           29                             20
  CLUS_4                           16                             24
D75V7, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           31                             49
  CLUS_3                           38                             41
  CLUS_4                           23                             15
D75V8, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           48                             68
  CLUS_2                           35                             51
  CLUS_3                           35                             20
D75V9, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           74                             69
  CLUS_2                           70                             95
  CLUS_3                           11                             28
D75V10, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           16                             37
  CLUS_2                           83                             93
  CLUS_3                           56                             62

Clustering(76) Variable = Del Peak 44(19q13.33) mutation analysis
D76V1, multiclass
        clus
vv       DEL PEAK 44(19Q13.33) MUTATED DEL PEAK 44(19Q13.33) WILD-TYPE
  CLUS_1                             9                              34
  CLUS_2                            16                              34
  CLUS_3                             9                              21
  CLUS_4                             7                              24
D76V2, multiclass
        clus
vv       DEL PEAK 44(19Q13.33) MUTATED DEL PEAK 44(19Q13.33) WILD-TYPE
  CLUS_1                             9                              19
  CLUS_2                            19                              35
  CLUS_3                            13                              59
D76V3, multiclass
        clus
vv       DEL PEAK 44(19Q13.33) MUTATED DEL PEAK 44(19Q13.33) WILD-TYPE
  CLUS_1                            22                             121
  CLUS_2                            48                              81
  CLUS_3                            36                              89
D76V4, multiclass
        clus
vv       DEL PEAK 44(19Q13.33) MUTATED DEL PEAK 44(19Q13.33) WILD-TYPE
  CLUS_1                            12                              86
  CLUS_2                            30                              53
  CLUS_3                            23                              46
D76V5, multiclass
        clus
vv       DEL PEAK 44(19Q13.33) MUTATED DEL PEAK 44(19Q13.33) WILD-TYPE
  CLUS_1                            20                              40
  CLUS_2                            15                              58
  CLUS_3                            17                              44
D76V6, multiclass
        clus
vv       DEL PEAK 44(19Q13.33) MUTATED DEL PEAK 44(19Q13.33) WILD-TYPE
  CLUS_1                            13                              45
  CLUS_2                            15                              32
  CLUS_3                            14                              35
  CLUS_4                            10                              30
D76V7, multiclass
        clus
vv       DEL PEAK 44(19Q13.33) MUTATED DEL PEAK 44(19Q13.33) WILD-TYPE
  CLUS_1                            14                              46
  CLUS_2                            26                              54
  CLUS_3                            17                              62
  CLUS_4                            10                              28
D76V8, multiclass
        clus
vv       DEL PEAK 44(19Q13.33) MUTATED DEL PEAK 44(19Q13.33) WILD-TYPE
  CLUS_1                            25                              91
  CLUS_2                            28                              58
  CLUS_3                            14                              41
D76V9, multiclass
        clus
vv       DEL PEAK 44(19Q13.33) MUTATED DEL PEAK 44(19Q13.33) WILD-TYPE
  CLUS_1                            33                             110
  CLUS_2                            47                             118
  CLUS_3                             8                              31
D76V10, multiclass
        clus
vv       DEL PEAK 44(19Q13.33) MUTATED DEL PEAK 44(19Q13.33) WILD-TYPE
  CLUS_1                             8                              45
  CLUS_2                            45                             131
  CLUS_3                            35                              83

Clustering(77) Variable = Del Peak 45(21q21.1) mutation analysis
D77V1, multiclass
        clus
vv       DEL PEAK 45(21Q21.1) MUTATED DEL PEAK 45(21Q21.1) WILD-TYPE
  CLUS_1                           23                             20
  CLUS_2                           24                             26
  CLUS_3                           15                             15
  CLUS_4                           11                             20
D77V2, multiclass
        clus
vv       DEL PEAK 45(21Q21.1) MUTATED DEL PEAK 45(21Q21.1) WILD-TYPE
  CLUS_1                            9                             19
  CLUS_2                           25                             29
  CLUS_3                           39                             33
D77V3, multiclass
        clus
vv       DEL PEAK 45(21Q21.1) MUTATED DEL PEAK 45(21Q21.1) WILD-TYPE
  CLUS_1                           54                             89
  CLUS_2                           70                             59
  CLUS_3                           65                             60
D77V4, multiclass
        clus
vv       DEL PEAK 45(21Q21.1) MUTATED DEL PEAK 45(21Q21.1) WILD-TYPE
  CLUS_1                           38                             60
  CLUS_2                           47                             36
  CLUS_3                           38                             31
D77V5, multiclass
        clus
vv       DEL PEAK 45(21Q21.1) MUTATED DEL PEAK 45(21Q21.1) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           35                             38
  CLUS_3                           24                             37
D77V6, multiclass
        clus
vv       DEL PEAK 45(21Q21.1) MUTATED DEL PEAK 45(21Q21.1) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           21                             26
  CLUS_3                           23                             26
  CLUS_4                           17                             23
D77V7, multiclass
        clus
vv       DEL PEAK 45(21Q21.1) MUTATED DEL PEAK 45(21Q21.1) WILD-TYPE
  CLUS_1                           30                             30
  CLUS_2                           39                             41
  CLUS_3                           39                             40
  CLUS_4                           18                             20
D77V8, multiclass
        clus
vv       DEL PEAK 45(21Q21.1) MUTATED DEL PEAK 45(21Q21.1) WILD-TYPE
  CLUS_1                           55                             61
  CLUS_2                           42                             44
  CLUS_3                           29                             26
D77V9, multiclass
        clus
vv       DEL PEAK 45(21Q21.1) MUTATED DEL PEAK 45(21Q21.1) WILD-TYPE
  CLUS_1                           78                             65
  CLUS_2                           78                             87
  CLUS_3                           13                             26
D77V10, multiclass
        clus
vv       DEL PEAK 45(21Q21.1) MUTATED DEL PEAK 45(21Q21.1) WILD-TYPE
  CLUS_1                           19                             34
  CLUS_2                           85                             91
  CLUS_3                           65                             53

Clustering(78) Variable = Del Peak 46(21q22.3) mutation analysis
D78V1, multiclass
        clus
vv       DEL PEAK 46(21Q22.3) MUTATED DEL PEAK 46(21Q22.3) WILD-TYPE
  CLUS_1                           26                             17
  CLUS_2                           32                             18
  CLUS_3                           18                             12
  CLUS_4                           18                             13
D78V2, multiclass
        clus
vv       DEL PEAK 46(21Q22.3) MUTATED DEL PEAK 46(21Q22.3) WILD-TYPE
  CLUS_1                           13                             15
  CLUS_2                           36                             18
  CLUS_3                           45                             27
D78V3, multiclass
        clus
vv       DEL PEAK 46(21Q22.3) MUTATED DEL PEAK 46(21Q22.3) WILD-TYPE
  CLUS_1                           53                             90
  CLUS_2                           91                             38
  CLUS_3                           80                             45
D78V4, multiclass
        clus
vv       DEL PEAK 46(21Q22.3) MUTATED DEL PEAK 46(21Q22.3) WILD-TYPE
  CLUS_1                           42                             56
  CLUS_2                           57                             26
  CLUS_3                           39                             30
D78V5, multiclass
        clus
vv       DEL PEAK 46(21Q22.3) MUTATED DEL PEAK 46(21Q22.3) WILD-TYPE
  CLUS_1                           34                             26
  CLUS_2                           43                             30
  CLUS_3                           29                             32
D78V6, multiclass
        clus
vv       DEL PEAK 46(21Q22.3) MUTATED DEL PEAK 46(21Q22.3) WILD-TYPE
  CLUS_1                           27                             31
  CLUS_2                           31                             16
  CLUS_3                           30                             19
  CLUS_4                           18                             22
D78V7, multiclass
        clus
vv       DEL PEAK 46(21Q22.3) MUTATED DEL PEAK 46(21Q22.3) WILD-TYPE
  CLUS_1                           36                             24
  CLUS_2                           51                             29
  CLUS_3                           43                             36
  CLUS_4                           20                             18
D78V8, multiclass
        clus
vv       DEL PEAK 46(21Q22.3) MUTATED DEL PEAK 46(21Q22.3) WILD-TYPE
  CLUS_1                           64                             52
  CLUS_2                           56                             30
  CLUS_3                           30                             25
D78V9, multiclass
        clus
vv       DEL PEAK 46(21Q22.3) MUTATED DEL PEAK 46(21Q22.3) WILD-TYPE
  CLUS_1                           97                             46
  CLUS_2                           83                             82
  CLUS_3                           19                             20
D78V10, multiclass
        clus
vv       DEL PEAK 46(21Q22.3) MUTATED DEL PEAK 46(21Q22.3) WILD-TYPE
  CLUS_1                           29                             24
  CLUS_2                           96                             80
  CLUS_3                           74                             44

Clustering(79) Variable = Del Peak 47(22q11.21) mutation analysis
D79V1, multiclass
        clus
vv       DEL PEAK 47(22Q11.21) MUTATED DEL PEAK 47(22Q11.21) WILD-TYPE
  CLUS_1                             5                              38
  CLUS_2                            10                              40
  CLUS_3                             8                              22
  CLUS_4                            11                              20
D79V2, multiclass
        clus
vv       DEL PEAK 47(22Q11.21) MUTATED DEL PEAK 47(22Q11.21) WILD-TYPE
  CLUS_1                            12                              16
  CLUS_2                            12                              42
  CLUS_3                            10                              62
D79V3, multiclass
        clus
vv       DEL PEAK 47(22Q11.21) MUTATED DEL PEAK 47(22Q11.21) WILD-TYPE
  CLUS_1                            33                             110
  CLUS_2                            17                             112
  CLUS_3                            18                             107
D79V4, multiclass
        clus
vv       DEL PEAK 47(22Q11.21) MUTATED DEL PEAK 47(22Q11.21) WILD-TYPE
  CLUS_1                            21                              77
  CLUS_2                             8                              75
  CLUS_3                             9                              60
D79V5, multiclass
        clus
vv       DEL PEAK 47(22Q11.21) MUTATED DEL PEAK 47(22Q11.21) WILD-TYPE
  CLUS_1                            14                              46
  CLUS_2                            12                              61
  CLUS_3                             6                              55
D79V6, multiclass
        clus
vv       DEL PEAK 47(22Q11.21) MUTATED DEL PEAK 47(22Q11.21) WILD-TYPE
  CLUS_1                            15                              43
  CLUS_2                             5                              42
  CLUS_3                             8                              41
  CLUS_4                             4                              36
D79V7, multiclass
        clus
vv       DEL PEAK 47(22Q11.21) MUTATED DEL PEAK 47(22Q11.21) WILD-TYPE
  CLUS_1                             9                              51
  CLUS_2                            13                              67
  CLUS_3                            17                              62
  CLUS_4                             9                              29
D79V8, multiclass
        clus
vv       DEL PEAK 47(22Q11.21) MUTATED DEL PEAK 47(22Q11.21) WILD-TYPE
  CLUS_1                            20                              96
  CLUS_2                            16                              70
  CLUS_3                            12                              43
D79V9, multiclass
        clus
vv       DEL PEAK 47(22Q11.21) MUTATED DEL PEAK 47(22Q11.21) WILD-TYPE
  CLUS_1                            30                             113
  CLUS_2                            22                             143
  CLUS_3                             5                              34
D79V10, multiclass
        clus
vv       DEL PEAK 47(22Q11.21) MUTATED DEL PEAK 47(22Q11.21) WILD-TYPE
  CLUS_1                             9                              44
  CLUS_2                            35                             141
  CLUS_3                            13                             105

Clustering(80) Variable = Del Peak 48(22q13.32) mutation analysis
D80V1, multiclass
        clus
vv       DEL PEAK 48(22Q13.32) MUTATED DEL PEAK 48(22Q13.32) WILD-TYPE
  CLUS_1                             9                              34
  CLUS_2                             7                              43
  CLUS_3                             7                              23
  CLUS_4                            18                              13
D80V2, multiclass
        clus
vv       DEL PEAK 48(22Q13.32) MUTATED DEL PEAK 48(22Q13.32) WILD-TYPE
  CLUS_1                            17                              11
  CLUS_2                             9                              45
  CLUS_3                            15                              57
D80V3, multiclass
        clus
vv       DEL PEAK 48(22Q13.32) MUTATED DEL PEAK 48(22Q13.32) WILD-TYPE
  CLUS_1                            42                             101
  CLUS_2                            20                             109
  CLUS_3                            33                              92
D80V4, multiclass
        clus
vv       DEL PEAK 48(22Q13.32) MUTATED DEL PEAK 48(22Q13.32) WILD-TYPE
  CLUS_1                            28                              70
  CLUS_2                            16                              67
  CLUS_3                            17                              52
D80V5, multiclass
        clus
vv       DEL PEAK 48(22Q13.32) MUTATED DEL PEAK 48(22Q13.32) WILD-TYPE
  CLUS_1                            17                              43
  CLUS_2                            17                              56
  CLUS_3                            12                              49
D80V6, multiclass
        clus
vv       DEL PEAK 48(22Q13.32) MUTATED DEL PEAK 48(22Q13.32) WILD-TYPE
  CLUS_1                            19                              39
  CLUS_2                             7                              40
  CLUS_3                            14                              35
  CLUS_4                             6                              34
D80V7, multiclass
        clus
vv       DEL PEAK 48(22Q13.32) MUTATED DEL PEAK 48(22Q13.32) WILD-TYPE
  CLUS_1                            12                              48
  CLUS_2                            13                              67
  CLUS_3                            27                              52
  CLUS_4                             9                              29
D80V8, multiclass
        clus
vv       DEL PEAK 48(22Q13.32) MUTATED DEL PEAK 48(22Q13.32) WILD-TYPE
  CLUS_1                            29                              87
  CLUS_2                            15                              71
  CLUS_3                            17                              38
D80V9, multiclass
        clus
vv       DEL PEAK 48(22Q13.32) MUTATED DEL PEAK 48(22Q13.32) WILD-TYPE
  CLUS_1                            36                             107
  CLUS_2                            43                             122
  CLUS_3                             4                              35
D80V10, multiclass
        clus
vv       DEL PEAK 48(22Q13.32) MUTATED DEL PEAK 48(22Q13.32) WILD-TYPE
  CLUS_1                             5                              48
  CLUS_2                            45                             131
  CLUS_3                            33                              85

Clustering(81) Variable = Del Peak 49(Xp22.2) mutation analysis
D81V1, multiclass
        clus
vv       DEL PEAK 49(XP22.2) MUTATED DEL PEAK 49(XP22.2) WILD-TYPE
  CLUS_1                          11                            32
  CLUS_2                          18                            32
  CLUS_3                           7                            23
  CLUS_4                          10                            21
D81V2, multiclass
        clus
vv       DEL PEAK 49(XP22.2) MUTATED DEL PEAK 49(XP22.2) WILD-TYPE
  CLUS_1                           8                            20
  CLUS_2                          20                            34
  CLUS_3                          18                            54
D81V3, multiclass
        clus
vv       DEL PEAK 49(XP22.2) MUTATED DEL PEAK 49(XP22.2) WILD-TYPE
  CLUS_1                          28                           115
  CLUS_2                          53                            76
  CLUS_3                          45                            80
D81V4, multiclass
        clus
vv       DEL PEAK 49(XP22.2) MUTATED DEL PEAK 49(XP22.2) WILD-TYPE
  CLUS_1                          21                            77
  CLUS_2                          32                            51
  CLUS_3                          28                            41
D81V5, multiclass
        clus
vv       DEL PEAK 49(XP22.2) MUTATED DEL PEAK 49(XP22.2) WILD-TYPE
  CLUS_1                          24                            36
  CLUS_2                          25                            48
  CLUS_3                          16                            45
D81V6, multiclass
        clus
vv       DEL PEAK 49(XP22.2) MUTATED DEL PEAK 49(XP22.2) WILD-TYPE
  CLUS_1                          20                            38
  CLUS_2                          18                            29
  CLUS_3                          14                            35
  CLUS_4                          13                            27
D81V7, multiclass
        clus
vv       DEL PEAK 49(XP22.2) MUTATED DEL PEAK 49(XP22.2) WILD-TYPE
  CLUS_1                          17                            43
  CLUS_2                          31                            49
  CLUS_3                          27                            52
  CLUS_4                           7                            31
D81V8, multiclass
        clus
vv       DEL PEAK 49(XP22.2) MUTATED DEL PEAK 49(XP22.2) WILD-TYPE
  CLUS_1                          30                            86
  CLUS_2                          34                            52
  CLUS_3                          18                            37
D81V9, multiclass
        clus
vv       DEL PEAK 49(XP22.2) MUTATED DEL PEAK 49(XP22.2) WILD-TYPE
  CLUS_1                          42                           101
  CLUS_2                          49                           116
  CLUS_3                          18                            21
D81V10, multiclass
        clus
vv       DEL PEAK 49(XP22.2) MUTATED DEL PEAK 49(XP22.2) WILD-TYPE
  CLUS_1                          19                            34
  CLUS_2                          48                           128
  CLUS_3                          42                            76

Clustering(82) Variable = Del Peak 50(Xp21.1) mutation analysis
D82V1, multiclass
        clus
vv       DEL PEAK 50(XP21.1) MUTATED DEL PEAK 50(XP21.1) WILD-TYPE
  CLUS_1                          11                            32
  CLUS_2                          20                            30
  CLUS_3                           7                            23
  CLUS_4                           9                            22
D82V2, multiclass
        clus
vv       DEL PEAK 50(XP21.1) MUTATED DEL PEAK 50(XP21.1) WILD-TYPE
  CLUS_1                           7                            21
  CLUS_2                          22                            32
  CLUS_3                          18                            54
D82V3, multiclass
        clus
vv       DEL PEAK 50(XP21.1) MUTATED DEL PEAK 50(XP21.1) WILD-TYPE
  CLUS_1                          27                           116
  CLUS_2                          55                            74
  CLUS_3                          45                            80
D82V4, multiclass
        clus
vv       DEL PEAK 50(XP21.1) MUTATED DEL PEAK 50(XP21.1) WILD-TYPE
  CLUS_1                          18                            80
  CLUS_2                          36                            47
  CLUS_3                          29                            40
D82V5, multiclass
        clus
vv       DEL PEAK 50(XP21.1) MUTATED DEL PEAK 50(XP21.1) WILD-TYPE
  CLUS_1                          23                            37
  CLUS_2                          22                            51
  CLUS_3                          16                            45
D82V6, multiclass
        clus
vv       DEL PEAK 50(XP21.1) MUTATED DEL PEAK 50(XP21.1) WILD-TYPE
  CLUS_1                          20                            38
  CLUS_2                          16                            31
  CLUS_3                          12                            37
  CLUS_4                          13                            27
D82V7, multiclass
        clus
vv       DEL PEAK 50(XP21.1) MUTATED DEL PEAK 50(XP21.1) WILD-TYPE
  CLUS_1                          16                            44
  CLUS_2                          34                            46
  CLUS_3                          24                            55
  CLUS_4                           8                            30
D82V8, multiclass
        clus
vv       DEL PEAK 50(XP21.1) MUTATED DEL PEAK 50(XP21.1) WILD-TYPE
  CLUS_1                          27                            89
  CLUS_2                          38                            48
  CLUS_3                          17                            38
D82V9, multiclass
        clus
vv       DEL PEAK 50(XP21.1) MUTATED DEL PEAK 50(XP21.1) WILD-TYPE
  CLUS_1                          44                            99
  CLUS_2                          54                           111
  CLUS_3                          17                            22
D82V10, multiclass
        clus
vv       DEL PEAK 50(XP21.1) MUTATED DEL PEAK 50(XP21.1) WILD-TYPE
  CLUS_1                          23                            30
  CLUS_2                          50                           126
  CLUS_3                          42                            76

Clustering(83) Variable = Del Peak 51(Xp11.3) mutation analysis
D83V1, multiclass
        clus
vv       DEL PEAK 51(XP11.3) MUTATED DEL PEAK 51(XP11.3) WILD-TYPE
  CLUS_1                           9                            34
  CLUS_2                          20                            30
  CLUS_3                           6                            24
  CLUS_4                          13                            18
D83V2, multiclass
        clus
vv       DEL PEAK 51(XP11.3) MUTATED DEL PEAK 51(XP11.3) WILD-TYPE
  CLUS_1                           8                            20
  CLUS_2                          22                            32
  CLUS_3                          18                            54
D83V3, multiclass
        clus
vv       DEL PEAK 51(XP11.3) MUTATED DEL PEAK 51(XP11.3) WILD-TYPE
  CLUS_1                          26                           117
  CLUS_2                          58                            71
  CLUS_3                          41                            84
D83V4, multiclass
        clus
vv       DEL PEAK 51(XP11.3) MUTATED DEL PEAK 51(XP11.3) WILD-TYPE
  CLUS_1                          16                            82
  CLUS_2                          38                            45
  CLUS_3                          26                            43
D83V5, multiclass
        clus
vv       DEL PEAK 51(XP11.3) MUTATED DEL PEAK 51(XP11.3) WILD-TYPE
  CLUS_1                          25                            35
  CLUS_2                          18                            55
  CLUS_3                          17                            44
D83V6, multiclass
        clus
vv       DEL PEAK 51(XP11.3) MUTATED DEL PEAK 51(XP11.3) WILD-TYPE
  CLUS_1                          22                            36
  CLUS_2                          17                            30
  CLUS_3                           9                            40
  CLUS_4                          12                            28
D83V7, multiclass
        clus
vv       DEL PEAK 51(XP11.3) MUTATED DEL PEAK 51(XP11.3) WILD-TYPE
  CLUS_1                          16                            44
  CLUS_2                          35                            45
  CLUS_3                          27                            52
  CLUS_4                           6                            32
D83V8, multiclass
        clus
vv       DEL PEAK 51(XP11.3) MUTATED DEL PEAK 51(XP11.3) WILD-TYPE
  CLUS_1                          28                            88
  CLUS_2                          37                            49
  CLUS_3                          19                            36
D83V9, multiclass
        clus
vv       DEL PEAK 51(XP11.3) MUTATED DEL PEAK 51(XP11.3) WILD-TYPE
  CLUS_1                          44                            99
  CLUS_2                          48                           117
  CLUS_3                          19                            20
D83V10, multiclass
        clus
vv       DEL PEAK 51(XP11.3) MUTATED DEL PEAK 51(XP11.3) WILD-TYPE
  CLUS_1                          22                            31
  CLUS_2                          50                           126
  CLUS_3                          39                            79

Clustering(84) Variable = Del Peak 52(Xq22.3) mutation analysis
D84V1, multiclass
        clus
vv       DEL PEAK 52(XQ22.3) MUTATED DEL PEAK 52(XQ22.3) WILD-TYPE
  CLUS_1                          17                            26
  CLUS_2                           7                            43
  CLUS_3                           5                            25
  CLUS_4                          12                            19
D84V2, multiclass
        clus
vv       DEL PEAK 52(XQ22.3) MUTATED DEL PEAK 52(XQ22.3) WILD-TYPE
  CLUS_1                           8                            20
  CLUS_2                           9                            45
  CLUS_3                          24                            48
D84V3, multiclass
        clus
vv       DEL PEAK 52(XQ22.3) MUTATED DEL PEAK 52(XQ22.3) WILD-TYPE
  CLUS_1                          18                           125
  CLUS_2                          31                            98
  CLUS_3                          46                            79
D84V4, multiclass
        clus
vv       DEL PEAK 52(XQ22.3) MUTATED DEL PEAK 52(XQ22.3) WILD-TYPE
  CLUS_1                          10                            88
  CLUS_2                          20                            63
  CLUS_3                          25                            44
D84V5, multiclass
        clus
vv       DEL PEAK 52(XQ22.3) MUTATED DEL PEAK 52(XQ22.3) WILD-TYPE
  CLUS_1                          17                            43
  CLUS_2                          18                            55
  CLUS_3                          13                            48
D84V6, multiclass
        clus
vv       DEL PEAK 52(XQ22.3) MUTATED DEL PEAK 52(XQ22.3) WILD-TYPE
  CLUS_1                          16                            42
  CLUS_2                          12                            35
  CLUS_3                          11                            38
  CLUS_4                           9                            31
D84V7, multiclass
        clus
vv       DEL PEAK 52(XQ22.3) MUTATED DEL PEAK 52(XQ22.3) WILD-TYPE
  CLUS_1                          21                            39
  CLUS_2                          16                            64
  CLUS_3                          23                            56
  CLUS_4                           5                            33
D84V8, multiclass
        clus
vv       DEL PEAK 52(XQ22.3) MUTATED DEL PEAK 52(XQ22.3) WILD-TYPE
  CLUS_1                          31                            85
  CLUS_2                          18                            68
  CLUS_3                          16                            39
D84V9, multiclass
        clus
vv       DEL PEAK 52(XQ22.3) MUTATED DEL PEAK 52(XQ22.3) WILD-TYPE
  CLUS_1                          40                           103
  CLUS_2                          37                           128
  CLUS_3                           9                            30
D84V10, multiclass
        clus
vv       DEL PEAK 52(XQ22.3) MUTATED DEL PEAK 52(XQ22.3) WILD-TYPE
  CLUS_1                          12                            41
  CLUS_2                          44                           132
  CLUS_3                          30                            88
                     V1                      V2                      V3 
            "MRNA_CNMF"    "MRNA_CHIERARCHICAL"               "CN_CNMF" 
                     V4                      V5                      V6 
     "METHLYATION_CNMF"             "RPPA_CNMF"    "RPPA_CHIERARCHICAL" 
                     V7                      V8                      V9 
         "MRNASEQ_CNMF" "MRNASEQ_CHIERARCHICAL"           "MIRSEQ_CNMF" 
                    V10 
 "MIRSEQ_CHIERARCHICAL" 
> q(save="no")
