index	chromosome	region_start	region_end	peak_start	peak_end	enlarged_peak_start	enlarged_peak_end	n_genes_in_region	genes_in_region	n_genes_in_peak	genes_in_peak	n_genes_on_chip	genes_on_chip	top 3
1	1	234277251	235376506	235005510	235014035	234930171	235135832	0	[TOMM20]	0	[LOC100506810]	
2	1	149881398	155456620	150585939	150622696	149933941	151725262	55	hsa-mir-554,hsa-mir-4257,ARNT,CTSK,CTSS,ECM1,ENSA,MCL1,PI4KB,PSMB4,PSMD4,RFX5,VPS72,TUFT1,PIP5K1A,ANXA9,SELENBP1,PRPF3,SETDB1,SEMA6C,MLLT11,CELF3,VPS45,POGZ,RPRD2,CA14,TMOD4,CERS2,APH1A,PLEKHO1,MRPS21,ADAMTSL4,C1orf56,GOLPH3L,FAM63A,CDC42SE1,OTUD7B,CGN,ZNF687,PRUNE,SCNM1,TNFAIP8L2,C1orf54,TARS2,SNX27,ANP32E,HORMAD1,GABPB2,C1orf51,BNIPL,RIIAD1,LYSMD1,MIR554,MIR4257,TNFAIP8L2-SCNM1,	2	ENSA,GOLPH3L,	
3	1	10708396	11093944	10876600	11018065	10687726	11092689	5	PEX14,MASP2,TARDBP,CASZ1,C1orf127,	1	C1orf127,	
4	3	158546665	197538677	169449462	169507092	163127890	184702824	105	hsa-mir-1224,hsa-mir-569,hsa-mir-551b,hsa-mir-720,hsa-mir-1263,ACTL6A,BCHE,AP2M1,CLCN2,DVL3,ECT2,EIF4G1,EPHB3,MECOM,GHSR,NDUFB5,CLDN11,SERPINI1,SERPINI2,PIK3CA,PLD1,POLR2H,PRKCI,PSMD2,SI,SKIL,SLC2A2,SOX2,TERC,THPO,SEC62,FXR1,CHRD,TNFSF10,EIF2B5,USP13,ECE2,ABCC5,ALG3,KCNMB2,PDCD10,SLITRK3,NLGN1,TNIK,MCF2L2,ATP11B,VPS8,GPR160,LAMP3,KCNMB3,GOLIM4,ZNF639,PEX5L,DCUN1D1,KLHL24,ABCF3,PARL,MFN1,YEATS2,MYNN,EIF5A2,MCCC1,MRPL47,NCEH1,SLC7A14,GNB4,MAGEF1,ZMAT3,FNDC3B,TBL1XR1,ZBBX,LRRC31,MAP6D1,PHC3,SPATA16,B3GNT5,ARPM1,KLHL6,VWA5B2,EGFEM1P,CAMK2N2,DNAJC19,FAM131A,TTC14,WDR49,LRRC34,HTR3C,HTR3D,RPL22L1,NAALADL2,HTR3E,CCDC39,LRRIQ4,SAMD7,SOX2-OT,TMEM212,FLJ46066,LOC646168,SNORD66,MIR551B,MIR569,LOC100128164,MIR1224,LOC100505687,MIR4789,	3	TERC,MYNN,ARPM1,	
5	5	35858324	44525206	41600324	42004327	33718454	50124856	75	hsa-mir-1274a,hsa-mir-580,C6,C7,C9,DAB2,FGF10,FYB,GDNF,GHR,HMGCS1,IL7R,LIFR,OXCT1,PRKAA1,PRLR,PTGER4,RAD1,RPL37,SEPP1,SKP2,SLC1A3,ZNF131,OSMR,NUP155,PAIP1,MRPS30,NNT,TTC33,AMACR,NIPBL,RAI14,FBXO4,SLC45A2,RXFP3,WDR70,BRIX1,CCL28,C5orf28,AGXT2,C5orf42,PARP8,SPEF2,ADAMTS12,CARD6,LMBRD2,C1QTNF3,EMB,HEATR7B2,EGFLAM,NADKD1,UGT3A1,CAPSL,DNAJC21,TTC23L,LOC153684,UGT3A2,NIM1,RANBP3L,RICTOR,C5orf51,PLCXD3,HCN1,C5orf34,C5orf39,SNORD72,LOC646719,LOC648987,MIR580,CCDC152,LOC100132356,MIR3650,LOC100506548,C1QTNF3-AMACR,EGFLAM-AS4,	3	OXCT1,FBXO4,C5orf51,	
6	5	914233	1893927	1404395	1428135	914233	15332569	81	hsa-mir-4278,hsa-mir-4277,ADCY2,CTNND2,DAP,DNAH5,MTRR,NDUFS6,SDHA,SLC6A3,SLC9A3,SRD5A1,TERT,TRIO,SEMA5A,TRIP13,PDCD6,MARCH6,SLC12A7,PAPD7,TPPP,EXOC3,CCT5,KIAA0947,PP7080,IRX4,TAS2R1,FAM105A,NSUN2,CEP72,ANKH,AHRR,MRPL36,BRD9,FASTKD3,IRX1,ZDHHC11,LPCAT1,CLPTM1L,ROPN1L,MED10,NKD2,FAM105B,C5orf55,CCDC127,UBE2QL1,C5orf49,FAM173B,CMBL,PLEKHG4B,C5orf38,IRX2,ADAMTS16,LOC255167,LOC285577,LOC285692,SLC6A19,LOC340094,SLC6A18,LRRC14B,FLJ33360,TAG,LOC442132,ANKRD33B,SDHAP3,LOC728613,LOC729506,SNORD123,LOC100130744,MIR4277,MIR4278,LOC100505738,LOC100505806,LOC100506688,MIR4458,MIR4454,MIR4457,MIR4637,MIR4636,MIR4456,MIR4635,	1	SLC6A3,	
7	6	39514771	47977481	43657737	43657737	43598755	43810974	5	VEGFA,MAD2L1BP,GTPBP2,MRPS18A,RSPH9,	0	[MRPS18A]	
8	6	63513688	64382624	64062385	64154037	63903403	64323654	2	PTP4A1,LGSN,	0	[LGSN]	
9	6	107111381	107222467	107120782	107166555	107099411	107221059	2	QRSL1,LOC100422737,	1	LOC100422737,	
10	7	85469299	101142334	92341976	92389516	92107752	92556768	6	CDK6,PEX1,RBM48,MGC16142,FAM133B,LOC728066,	1	CDK6,	
11	7	53946260	55928007	55082175	55099784	55035791	55417895	1	EGFR,	1	EGFR,	
12	7	705284	8545520	2547185	2634518	705284	13958762	102	hsa-mir-589,hsa-mir-339,ACTB,ETV1,GNA12,GPER,ICA1,LFNG,NUDT1,NDUFA4,PDGFA,PMS2,PRKAR1B,RAC1,RPA3,FSCN1,ZNF12,AIMP2,MAFK,MAD1L1,EIF3B,CYTH3,PHF14,KIAA0415,ARL4A,KDELR2,ADAP1,IQCE,SUN1,WIPI2,INTS1,EIF2AK1,SNX8,FTSJ2,NXPH1,GET4,CCZ1,MIOS,RNF216,TMEM106B,ZNF853,CYP2W1,HEATR2,ZDHHC4,CHST12,RADIL,PAPOLB,C1GALT1,FAM20C,RBAK,C7orf26,MICALL2,FBXL18,TTYH3,USP42,PSMG3,C7orf50,CARD11,TNRC18,C7orf70,SCIN,ZFAND2A,COX19,GLCCI1,KIAA1908,GPR146,AMZ1,PER4,TMEM184A,VWDE,BRAT1,SDK1,FOXK1,MMD2,DAGLB,CCZ1B,THSD7A,SLC29A4,RSPH10B,TFAMP1,UNCX,COL28A1,LOC389458,ELFN1,GRID2IP,ZNF815,RNF216P1,PMS2CL,FLJ44511,LOC442497,MIR339,ZNF890P,OCM,MIR589,RSPH10B2,LOC729852,LOC100131257,LOC100288524,RBAK-LOC389458,MIR4648,MIR4655,MIR4656,	4	LFNG,IQCE,BRAT1,MIR4648,	
13	8	112264415	145232496	128636753	128643231	128627756	128754563	1	MYC,	0	[MYC]	
14	8	8459696	14019069	11553144	11633282	11547971	11638878	2	GATA4,NEIL2,	2	GATA4,NEIL2,	
15	9	4772328	6202383	5564748	5603231	5047456	5708859	9	INSL4,JAK2,RLN1,RLN2,INSL6,CD274,C9orf46,KIAA1432,PDCD1LG2,	3	CD274,C9orf46,PDCD1LG2,	
16	9	139793923	140291031	139968796	140086045	139839904	140290821	37	ABCA2,C8G,ENTPD2,FUT7,GRIN1,PTGDS,SSNA1,CLIC3,TUBB4B,MAN1B1,COBRA1,NDOR1,ANAPC2,DPP7,FBXW5,C9orf167,EXD3,NPDC1,SAPCD2,UAP1L1,TMEM203,SLC34A3,LCN12,C9orf142,TPRN,C9orf169,LRRC26,LCNL1,C9orf139,FAM166A,C9orf173,NRARP,RNF224,RNF208,LOC100129722,LOC100289341,MIR3621,	19	GRIN1,SSNA1,TUBB4B,MAN1B1,NDOR1,ANAPC2,DPP7,SAPCD2,UAP1L1,TMEM203,SLC34A3,TPRN,C9orf169,LRRC26,FAM166A,RNF224,RNF208,LOC100289341,MIR3621,	
17	10	122436316	124014939	123240578	123320471	123172835	123398895	1	FGFR2,	1	FGFR2,	
18	11	67841094	71127911	69434272	69504492	69151011	69594005	4	CCND1,FGF4,FGF19,ORAOV1,	2	CCND1,ORAOV1,	
19	11	34435551	35661450	35244574	35259191	35244058	35259407	1	CD44,	1	CD44,	
20	12	22174492	28288716	25386944	25402069	25348931	25414348	2	KRAS,LYRM5,	1	KRAS,	
21	12	64885951	71340085	69276040	69278369	69124408	69586186	4	CPM,MDM2,SLC35E3,NUP107,	1	CPM,	
22	13	72974396	74511697	73691528	73704973	73646859	73944461	1	KLF5,	0	[KLF5]	
23	13	31031546	35523204	31922220	31989640	30946933	34416156	21	ALOX5AP,BRCA2,HMGB1,RFC3,KL,FRY,USPL1,N4BP2L2,HSPH1,PDS5B,C13orf33,STARD13,N4BP2L1,CG030,RXFP2,TEX26,B3GALTL,EEF1DP3,ZAR1L,LINC00426,TEX26-AS1,	0	[B3GALTL]	
24	15	88698615	101884307	91075129	91183967	90778486	91264068	8	BLM,IQGAP1,GABARAPL3,NGRN,CRTC3,ZNF774,C15orf58,TTLL13,	1	CRTC3,	
25	17	34931836	40473686	37861388	37861388	37855834	37875909	1	ERBB2,	1	ERBB2,	
26	18	18697629	20935833	19629239	19667074	19598429	19766491	1	GATA6,	0	[GATA6]	
27	19	28240494	33475123	30307098	30308526	30289536	30358072	1	CCNE1,	1	CCNE1,	
28	20	41346402	62219837	52341686	52374225	52151185	52552586	2	ZNF217,SUMO1P1,	0	[SUMO1P1]	
29	X	130980051	136613344	133442016	133517508	126234360	154905589	298	hsa-mir-1184-3,hsa-mir-1184-2,hsa-mir-1184-1,hsa-mir-718,hsa-mir-105-2,hsa-mir-452,hsa-mir-4330,hsa-mir-2114,hsa-mir-514-3,hsa-mir-513c,hsa-mir-891a,hsa-mir-891b,hsa-mir-320d-2,hsa-mir-505,hsa-mir-504,hsa-mir-934,hsa-mir-424,hsa-mir-106a,ABCD1,ARHGAP4,ATP2B3,ATP6AP1,AVPR2,BGN,BRS3,CD40LG,CDR1,CETN2,CLIC2,CNGA2,CTAG1B,TEX28,DKC1,DNASE1L1,DUSP9,ELF4,EMD,F8,F9,GPC4,FGF13,FHL1,FLNA,FMR1,AFF2,G6PD,GABRA3,GABRE,OPN1MW,GDI1,GPC3,HCFC1,HMGB3,HPRT1,IDH3G,IDS,IGSF1,IL9R,IRAK1,L1CAM,MAGEA1,MAGEA2,MAGEA3,MAGEA4,MAGEA5,MAGEA6,MAGEA8,MAGEA9,MAGEA10,MAGEA11,MAGEA12,MCF2,MECP2,MPP1,MTCP1,MTM1,OCRL,PLXNB3,OPN1LW,RENBP,RPL10,SLC6A8,SMARCA1,SOX3,SRD5A1P1,SSR4,VAMP7,TAZ,VBP1,XPNPEP2,ZIC3,ZNF75D,ZNF185,NAA10,F8A1,UBL4A,TMEM187,LAGE3,SLC10A3,TKTL1,IKBKG,MTMR1,APLN,FAM127A,SLC25A14,FAM50A,AIFM1,CXorf1,GPR50,RAB33A,ARHGEF6,MAGEC1,MAMLD1,BCAP31,SPRY3,SLC9A6,ENOX2,PLAC1,UTP14A,ZNF275,TREX2,LDOC1,FAM127B,SRPK3,SNORA70,SNORD61,RBMX,HTATSF1,PNMA3,SPANXA1,CTAG2,NSDHL,ZDHHC9,TFDP3,MAGEC2,VGLL1,RBMX2,MST4,SASH3,CXorf48,TMLHE,SAGE1,PLXNA3,HAUS7,ZNF280C,MBNL3,FAM45B,GABRQ,MOSPD1,PDZD4,RAP2C,FAM3A,BCORL1,SPANXD,SPANXC,FUNDC2,PRRG3,BRCC3,MAP7D3,GPR101,CD99L2,H2AFB3,USP26,PHF6,TMEM185A,SLITRK2,MGC16121,PNMA6A,FATE1,HS6ST2,FRMD7,CXorf40A,FAM58A,MMGT1,PNMA5,RAB39B,SLITRK4,SPANXN3,MAGEC3,PASD1,GPR112,GAB3,PNCK,ZFP92,ACTRT1,GPR119,CSAG1,FMR1NB,LOC158696,ARHGAP36,FAM122B,FAM122C,SPANXE,SPANXF1,DDX26B,ZNF449,VMA21,CTAG1A,MAGEA2B,ATP11C,RP1-177G6.2,LOC286467,LINC00204B,OR13H1,CCDC160,CXorf66,UBE2NL,CSAG3,LINC00086,MIR105-1,MIR105-2,MIR106A,MIR19B2,MIR92A2,FAM127C,CT45A3,CT45A4,CT45A5,SPANXN4,H2AFB2,H2AFB1,F8A2,F8A3,SPANXN1,SPANXN2,MIR424,CT45A6,CT45A1,CXorf40B,MIR450A1,MIR363,MIR20B,MIR18B,MIR452,MIR450A2,MIR503,MIR504,MIR505,MIR506,MIR507,MIR508,MIR509-1,MIR510,MIR514A1,MIR514A2,MIR514A3,SPANXA2-OT1,CXorf69,LINC00087,MIR542,SNORA36A,SNORA56,MAGEA9B,OPN1MW2,CSAG2,SPANXB1,SPANXA2,CT45A2,MIR767,FMR1-AS1,MIR509-2,MIR450B,MIR890,MIR891B,MIR888,MIR892B,MIR934,MIR509-3,MIR891A,MIR892A,LOC100128420,CXorf51A,LOC100129515,LOC100129662,HSFX2,LOC100131434,CXorf68,LINC00204A,CXorf51B,SPANXB2,MTCP1NB,LOC100272228,PNMA6C,PNMA6D,MIR1184-1,MIR320D2,MIR718,MIR2114,MIR514B,MIR3202-2,MIR4330,MIR1184-3,MIR1184-2,MIR3202-1,HSFX1,LOC100506757,LOC100507404,MAGEA10-MAGEA5,	1	PHF6,	
