Clinical Features	Time to Death		AGE		GENDER		RADIATIONS.RADIATION.REGIMENINDICATION		DISTANT.METASTASIS		LYMPH.NODE.METASTASIS		NUMBER.OF.LYMPH.NODES		TUMOR.STAGECODE		NEOPLASM.DISEASESTAGE	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q
1p gain	91 (11%)	766	0.18251	1	0.51319	1	1	1	0.020156	1	0.78734	1	0.56931	1	0.719	1	NA	NA	0.88418	1
1q gain	459 (54%)	398	0.069974	1	0.24131	1	1	1	0.42744	1	0.69453	1	0.66601	1	0.5732	1	NA	NA	0.41807	1
2p gain	48 (6%)	809	0.78376	1	0.69718	1	1	1	0.30195	1	0.34533	1	0.89777	1	0.40053	1	NA	NA	0.30207	1
2q gain	25 (3%)	832	0.9697	1	0.94873	1	1	1	0.015843	1	0.41579	1	0.64817	1	0.27155	1	NA	NA	0.78722	1
3p gain	54 (6%)	803	0.53384	1	0.035886	1	1	1	1	1	0.42296	1	0.47377	1	0.4908	1	NA	NA	0.11149	1
3q gain	95 (11%)	762	0.1769	1	0.52851	1	0.60819	1	1	1	0.44514	1	0.38821	1	0.17449	1	NA	NA	0.13419	1
4p gain	29 (3%)	828	0.066187	1	0.47705	1	1	1	0.51055	1	0.16793	1	0.78791	1	0.85158	1	NA	NA	0.0016032	1
4q gain	27 (3%)	830	0.024667	1	0.35291	1	1	1	1	1	0.20156	1	0.75277	1	0.68913	1	NA	NA	0.0024588	1
5p gain	162 (19%)	695	0.17271	1	0.057303	1	0.68117	1	0.18841	1	0.46617	1	0.31548	1	0.46368	1	NA	NA	0.82563	1
5q gain	99 (12%)	758	0.35021	1	0.005198	1	1	1	0.26659	1	0.35781	1	0.80565	1	0.86551	1	NA	NA	0.92976	1
6p gain	93 (11%)	764	0.83139	1	0.27301	1	1	1	0.007257	1	0.40955	1	0.86006	1	0.60665	1	NA	NA	0.6295	1
6q gain	56 (7%)	801	0.29435	1	0.069922	1	0.45727	1	0.52192	1	0.34215	1	0.4421	1	0.96161	1	NA	NA	0.74367	1
7p gain	152 (18%)	705	0.85855	1	0.09017	1	0.011297	1	0.012718	1	0.33378	1	0.37395	1	0.41646	1	NA	NA	0.89589	1
7q gain	110 (13%)	747	0.49614	1	0.63043	1	0.096867	1	0.012923	1	0.90911	1	0.40482	1	0.38282	1	NA	NA	0.93353	1
8p gain	166 (19%)	691	0.90866	1	0.098085	1	0.68812	1	0.92024	1	0.79818	1	0.82951	1	0.77331	1	NA	NA	0.74587	1
8q gain	368 (43%)	489	0.76962	1	0.032004	1	0.50926	1	0.12854	1	0.4567	1	0.24648	1	0.91693	1	NA	NA	0.61724	1
9p gain	65 (8%)	792	0.50569	1	0.53856	1	1	1	0.23515	1	0.60014	1	0.1307	1	0.28366	1	NA	NA	0.14951	1
9q gain	54 (6%)	803	0.43172	1	0.25033	1	1	1	0.14281	1	0.93586	1	0.38127	1	0.43368	1	NA	NA	0.69549	1
10p gain	106 (12%)	751	0.7781	1	0.83794	1	0.61105	1	0.27891	1	0.10919	1	0.60337	1	0.11316	1	NA	NA	0.0063281	1
10q gain	44 (5%)	813	0.79146	1	0.34709	1	1	1	0.28228	1	0.83661	1	0.89757	1	0.91933	1	NA	NA	0.8285	1
11p gain	64 (7%)	793	0.61697	1	0.73467	1	0.50438	1	0.76339	1	1	1	0.82799	1	0.3997	1	NA	NA	0.041297	1
11q gain	45 (5%)	812	0.048106	1	0.84772	1	1	1	0.72531	1	0.91741	1	0.35027	1	0.99848	1	NA	NA	0.039389	1
12p gain	112 (13%)	745	0.76496	1	0.56201	1	0.020647	1	0.23989	1	0.31195	1	0.71417	1	0.78757	1	NA	NA	0.89106	1
12q gain	85 (10%)	772	0.1563	1	0.19846	1	0.050946	1	0.2915	1	0.034686	1	0.82871	1	0.86595	1	NA	NA	0.94914	1
13q gain	45 (5%)	812	0.82526	1	0.9878	1	1	1	0.72531	1	0.06729	1	0.82514	1	0.068113	1	NA	NA	0.9457	1
14q gain	75 (9%)	782	0.16073	1	0.44491	1	1	1	0.3294	1	1	1	0.24408	1	0.033272	1	NA	NA	0.055074	1
15q gain	44 (5%)	813	0.65224	1	0.62517	1	0.37914	1	0.15185	1	0.47216	1	0.94127	1	0.61298	1	NA	NA	0.91007	1
16p gain	245 (29%)	612	0.62616	1	0.027839	1	1	1	0.18996	1	0.57984	1	0.11466	1	0.082142	1	NA	NA	0.16491	1
16q gain	53 (6%)	804	0.17674	1	0.77303	1	0.43861	1	0.86953	1	0.076084	1	0.61955	1	0.99248	1	NA	NA	0.024422	1
17p gain	46 (5%)	811	0.66739	1	0.48323	1	0.0096921	1	1	1	0.70883	1	0.8867	1	0.38752	1	NA	NA	0.76381	1
17q gain	120 (14%)	737	0.80542	1	0.65463	1	0.026209	1	0.81955	1	0.12045	1	0.75486	1	0.58032	1	NA	NA	0.49829	1
18p gain	83 (10%)	774	0.098933	1	0.033494	1	0.60201	1	0.059965	1	0.41311	1	0.60699	1	0.68534	1	NA	NA	0.41288	1
18q gain	74 (9%)	783	0.13158	1	0.57796	1	0.55813	1	0.20448	1	0.33565	1	0.89438	1	0.90469	1	NA	NA	0.30366	1
19p gain	68 (8%)	789	0.060321	1	0.21102	1	0.15553	1	0.14296	1	0.17366	1	0.86321	1	0.34914	1	NA	NA	0.68085	1
19q gain	84 (10%)	773	0.0077871	1	0.81068	1	0.21791	1	0.42433	1	0.022635	1	0.078371	1	0.31264	1	NA	NA	0.81963	1
20p gain	233 (27%)	624	0.045688	1	0.10732	1	0.066971	1	0.8588	1	0.14	1	0.28546	1	0.026008	1	NA	NA	0.27367	1
20q gain	268 (31%)	589	0.14126	1	0.48372	1	0.14753	1	0.66969	1	0.30502	1	0.32374	1	0.015803	1	NA	NA	0.11696	1
21q gain	99 (12%)	758	0.043606	1	0.026919	1	1	1	0.025191	1	0.64031	1	0.13511	1	0.025367	1	NA	NA	0.18099	1
22q gain	40 (5%)	817	0.80803	1	0.40478	1	1	1	0.57568	1	1	1	0.19017	1	0.72483	1	NA	NA	0.11179	1
Xq gain	20 (2%)	837	0.11765	1	0.1101	1	1	1	0.29656	1	0.10102	1	0.011674	1	0.60444	1	NA	NA	0.1479	1
1p loss	116 (14%)	741	0.14015	1	0.0093711	1	1	1	0.42028	1	0.33392	1	0.047161	1	0.068692	1	NA	NA	0.010343	1
1q loss	21 (2%)	836	0.62651	1	0.69818	1	1	1	1	1	0.81183	1	0.9562	1	0.62532	1	NA	NA	0.98895	1
2p loss	73 (9%)	784	0.82619	1	0.45754	1	1	1	0.15905	1	0.22426	1	0.6517	1	0.39799	1	NA	NA	0.35662	1
2q loss	87 (10%)	770	0.64237	1	0.67401	1	0.60977	1	0.2402	1	0.17458	1	0.62983	1	0.36173	1	NA	NA	0.14077	1
3p loss	88 (10%)	769	0.035554	1	0.049653	1	0.60939	1	0.43385	1	0.4535	1	0.99908	1	0.45294	1	NA	NA	0.75845	1
3q loss	43 (5%)	814	0.23057	1	0.086767	1	1	1	0.068018	1	0.23782	1	0.7364	1	0.69924	1	NA	NA	0.76713	1
4p loss	178 (21%)	679	0.45004	1	0.25223	1	1	1	0.11982	1	0.9468	1	0.36151	1	0.52978	1	NA	NA	0.50467	1
4q loss	150 (18%)	707	0.47695	1	0.96619	1	0.37279	1	0.46582	1	0.87549	1	0.13358	1	0.93775	1	NA	NA	0.491	1
5p loss	68 (8%)	789	0.1387	1	0.10616	1	0.52654	1	0.8843	1	0.44764	1	0.18086	1	0.8176	1	NA	NA	0.11994	1
5q loss	119 (14%)	738	0.30635	1	0.11839	1	0.62052	1	0.64748	1	0.75273	1	0.18237	1	0.20576	1	NA	NA	0.11461	1
6p loss	109 (13%)	748	0.25408	1	0.12802	1	0.6127	1	0.34305	1	0.11505	1	0.76427	1	0.94166	1	NA	NA	0.97387	1
6q loss	166 (19%)	691	0.95215	1	0.006968	1	0.21906	1	0.1326	1	0.4694	1	0.95671	1	0.64424	1	NA	NA	0.89829	1
7p loss	47 (5%)	810	0.52619	1	0.56573	1	1	1	0.29566	1	0.78282	1	0.78589	1	0.58239	1	NA	NA	0.14487	1
7q loss	63 (7%)	794	0.13221	1	0.25895	1	1	1	0.65113	1	0.19694	1	0.96726	1	0.30071	1	NA	NA	0.18861	1
8p loss	257 (30%)	600	0.003868	1	0.53832	1	1	1	0.86286	1	0.54779	1	0.33708	1	0.17581	1	NA	NA	0.91604	1
8q loss	45 (5%)	812	0.0059221	1	0.93086	1	1	1	0.59427	1	0.27526	1	0.50851	1	0.42381	1	NA	NA	0.55856	1
9p loss	184 (21%)	673	0.015752	1	0.95787	1	0.41311	1	0.44062	1	0.17697	1	0.15718	1	0.67506	1	NA	NA	0.094044	1
9q loss	140 (16%)	717	0.016343	1	0.53906	1	0.16963	1	0.91516	1	0.28504	1	0.19177	1	0.99426	1	NA	NA	0.29474	1
10p loss	72 (8%)	785	0.07775	1	0.53002	1	1	1	0.6704	1	0.035301	1	0.70924	1	0.49631	1	NA	NA	0.29392	1
10q loss	106 (12%)	751	0.0037624	1	0.69231	1	0.61105	1	0.47293	1	0.30242	1	0.3467	1	0.73748	1	NA	NA	0.70968	1
11p loss	138 (16%)	719	0.014884	1	0.38303	1	0.36854	1	0.59023	1	1	1	0.28495	1	0.037368	1	NA	NA	0.27081	1
11q loss	220 (26%)	637	0.15621	1	0.61722	1	0.053389	1	0.46872	1	0.61148	1	0.31929	1	0.15114	1	NA	NA	0.11273	1
12p loss	65 (8%)	792	0.097193	1	0.99524	1	0.51001	1	0.45451	1	0.79396	1	0.43279	1	0.86594	1	NA	NA	0.47064	1
12q loss	50 (6%)	807	0.22901	1	0.2178	1	1	1	0.61269	1	0.93013	1	0.76638	1	0.60381	1	NA	NA	0.15742	1
13q loss	257 (30%)	600	0.079113	1	0.17599	1	0.46402	1	1	1	0.49793	1	0.21092	1	0.61269	1	NA	NA	0.83813	1
14q loss	127 (15%)	730	0.008458	1	0.21675	1	0.37035	1	1	1	0.40911	1	0.061717	1	0.86185	1	NA	NA	0.72616	1
15q loss	156 (18%)	701	0.23399	1	0.17427	1	0.37711	1	0.47458	1	0.29035	1	0.58938	1	0.45179	1	NA	NA	0.44515	1
16p loss	53 (6%)	804	0.96232	1	0.65693	1	0.1022	1	0.86953	1	0.6419	1	0.74996	1	0.43522	1	NA	NA	0.75391	1
16q loss	366 (43%)	491	0.027185	1	0.0013458	0.857	1	1	0.47281	1	0.65284	1	0.48861	1	0.056351	1	NA	NA	0.92222	1
17p loss	357 (42%)	500	0.3379	1	0.024485	1	0.74217	1	0.077297	1	0.55079	1	0.45608	1	0.33115	1	NA	NA	0.33671	1
17q loss	137 (16%)	720	0.59778	1	0.23769	1	0.36847	1	0.91415	1	0.9272	1	0.20595	1	0.21267	1	NA	NA	0.95988	1
18p loss	167 (19%)	690	0.005923	1	0.0012665	0.808	1	1	0.42483	1	0.71214	1	0.53958	1	0.27009	1	NA	NA	0.44214	1
18q loss	166 (19%)	691	0.039583	1	0.0011109	0.71	1	1	0.48322	1	0.35594	1	0.44213	1	0.14918	1	NA	NA	0.066292	1
19p loss	66 (8%)	791	0.53312	1	0.31768	1	1	1	0.23566	1	0.35282	1	0.13598	1	0.53841	1	NA	NA	0.23386	1
19q loss	52 (6%)	805	0.63234	1	0.99123	1	1	1	0.62092	1	0.74144	1	0.08835	1	0.84617	1	NA	NA	0.033195	1
20p loss	50 (6%)	807	0.0035073	1	0.9443	1	0.41937	1	0.86602	1	0.33591	1	0.11944	1	0.31731	1	NA	NA	0.35198	1
20q loss	27 (3%)	830	0.57575	1	0.86534	1	1	1	0.65005	1	0.37597	1	0.44115	1	0.75436	1	NA	NA	0.83448	1
21q loss	83 (10%)	774	0.96116	1	0.6612	1	1	1	0.78914	1	0.13977	1	0.57179	1	0.45928	1	NA	NA	0.0050456	1
22q loss	288 (34%)	569	0.12365	1	0.84507	1	0.1724	1	0.11143	1	0.79755	1	0.066344	1	0.096994	1	NA	NA	0.79977	1
Xq loss	31 (4%)	826	0.053744	1	0.72197	1	0.038926	1	0.29728	1	0.32679	1	0.98757	1	0.37723	1	NA	NA	0.0010999	0.704