Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE PATHOLOGY.T PATHOLOGY.N PATHOLOGICSPREAD(M) TUMOR.STAGE nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1q gain 8 (8%) 96 8.7506e-05 0.0356 0.80139 1 0.43325 1 NA NA 0.0034573 1 0.83583 1 0.079417 1 0.0060382 1 2p gain 11 (11%) 93 0.18585 1 0.35661 1 0.74673 1 0.54095 1 0.80785 1 0.40005 1 0.044112 1 0.034219 1 2q gain 13 (12%) 91 0.34199 1 0.8471 1 0.75346 1 0.50088 1 0.91665 1 0.055354 1 0.06245 1 0.0085238 1 3p gain 24 (23%) 80 0.42048 1 0.91962 1 0.081484 1 0.079157 1 0.015635 1 1 1 0.69241 1 0.23572 1 3q gain 26 (25%) 78 0.29283 1 0.85904 1 0.032197 1 0.19723 1 0.040457 1 1 1 0.7657 1 0.39877 1 4p gain 4 (4%) 100 0.067691 1 0.042165 1 1 1 NA NA 0.25501 1 0.33613 1 0.029332 1 0.04979 1 4q gain 3 (3%) 101 0.69616 1 0.041639 1 1 1 NA NA 0.36284 1 NA NA NA NA NA NA 5p gain 10 (10%) 94 0.75421 1 0.38208 1 0.72516 1 0.39661 1 0.11728 1 0.6462 1 0.392 1 0.17642 1 5q gain 10 (10%) 94 0.30193 1 0.61167 1 0.72516 1 0.39661 1 0.40079 1 0.6462 1 0.58305 1 0.404 1 6p gain 4 (4%) 100 0.07353 1 0.36487 1 0.30059 1 NA NA 0.16843 1 0.68067 1 0.0067582 1 0.07621 1 6q gain 3 (3%) 101 4.202e-06 0.00171 0.25999 1 0.5491 1 NA NA 0.53101 1 NA NA 0.0065744 1 0.04979 1 7p gain 55 (53%) 49 0.075054 1 0.94851 1 0.058702 1 0.18391 1 0.001535 0.617 0.39595 1 0.16017 1 0.00046527 0.188 7q gain 56 (54%) 48 0.075054 1 0.94851 1 0.093813 1 0.18391 1 0.0037915 1 0.39595 1 0.17237 1 0.0017187 0.689 8p gain 5 (5%) 99 0.5677 1 0.24094 1 0.66101 1 NA NA 0.052258 1 0.55488 1 0.7303 1 0.15976 1 8q gain 7 (7%) 97 0.004608 1 0.62081 1 0.68038 1 NA NA 0.0096696 1 0.16137 1 0.48313 1 0.008717 1 10p gain 4 (4%) 100 0.48912 1 0.80141 1 1 1 NA NA 0.58874 1 NA NA 1 1 NA NA 10q gain 3 (3%) 101 0.48912 1 0.80141 1 0.5491 1 NA NA 0.22621 1 NA NA NA NA NA NA 12p gain 31 (30%) 73 0.97936 1 0.6577 1 0.022536 1 0.24817 1 0.95334 1 0.47239 1 0.32132 1 0.34681 1 12q gain 31 (30%) 73 0.97936 1 0.6577 1 0.022536 1 0.24817 1 0.95334 1 0.47239 1 0.32132 1 0.34681 1 13q gain 11 (11%) 93 0.7225 1 0.23691 1 0.74673 1 0.19723 1 0.60167 1 NA NA 1 1 0.74006 1 16p gain 44 (42%) 60 0.55003 1 0.43815 1 0.010584 1 0.52928 1 0.9605 1 0.19845 1 0.73548 1 0.86068 1 16q gain 41 (39%) 63 0.10651 1 0.55033 1 0.031655 1 0.25009 1 0.62968 1 0.18305 1 0.26897 1 0.81894 1 17p gain 52 (50%) 52 0.23114 1 0.050689 1 0.020784 1 0.18216 1 0.00029498 0.119 0.21576 1 0.061283 1 0.00027892 0.113 17q gain 62 (60%) 42 0.79143 1 0.10299 1 0.20272 1 0.56139 1 0.10469 1 0.14937 1 0.1274 1 0.13417 1 18p gain 6 (6%) 98 0.18958 1 0.59752 1 0.66101 1 0.54095 1 0.85237 1 NA NA 0.27967 1 0.45818 1 18q gain 4 (4%) 100 0.61157 1 0.57236 1 1 1 NA NA 1 1 NA NA 1 1 1 1 20p gain 31 (30%) 73 0.44607 1 0.019229 1 0.65432 1 0.63637 1 0.23063 1 0.8591 1 0.3939 1 0.43932 1 20q gain 32 (31%) 72 0.44607 1 0.046044 1 0.65136 1 0.63637 1 0.35386 1 0.8591 1 0.7002 1 0.63657 1 Xq gain 4 (4%) 100 0.41333 1 0.36235 1 0.10118 1 NA NA 0.77855 1 NA NA 0.62781 1 0.35632 1 1p loss 11 (11%) 93 0.72662 1 0.41431 1 1 1 0.34189 1 1 1 NA NA 1 1 0.5389 1 1q loss 6 (6%) 98 0.64893 1 0.82495 1 1 1 0.34189 1 0.71279 1 NA NA 0.53381 1 0.64301 1 3p loss 6 (6%) 98 0.20665 1 0.051925 1 0.66101 1 NA NA 0.075445 1 0.68132 1 0.339 1 0.092719 1 3q loss 3 (3%) 101 2.3962e-06 0.00098 0.32505 1 1 1 NA NA 0.070509 1 0.68067 1 0.20283 1 0.099417 1 4p loss 8 (8%) 96 0.18651 1 0.10411 1 0.014142 1 NA NA 0.13045 1 0.368 1 0.35227 1 0.051009 1 4q loss 9 (9%) 95 0.80043 1 0.41439 1 0.055676 1 NA NA 0.20027 1 0.76776 1 0.68451 1 0.14018 1 5p loss 4 (4%) 100 0.00019264 0.0782 0.066223 1 0.10118 1 NA NA 0.014715 1 0.095238 1 0.62781 1 0.099417 1 5q loss 4 (4%) 100 0.026368 1 0.22994 1 0.10118 1 NA NA 0.16843 1 NA NA 0.62781 1 0.56462 1 6p loss 9 (9%) 95 0.029071 1 0.99689 1 0.46965 1 0.24817 1 0.27277 1 0.20168 1 1 1 0.33492 1 6q loss 10 (10%) 94 0.2726 1 0.36128 1 0.075552 1 0.38346 1 0.13528 1 0.22816 1 0.48696 1 0.48269 1 8p loss 3 (3%) 101 0.7496 1 0.40405 1 0.03286 1 NA NA 0.22621 1 NA NA 1 1 0.2681 1 9p loss 13 (12%) 91 0.080075 1 0.47491 1 0.0084579 1 0.39765 1 0.050468 1 0.59651 1 0.38928 1 0.17597 1 9q loss 13 (12%) 91 0.12702 1 0.44807 1 0.026421 1 0.39765 1 0.038322 1 0.59651 1 0.57825 1 0.29493 1 10p loss 6 (6%) 98 0.25582 1 0.98711 1 0.38982 1 0.39661 1 0.38224 1 0.058263 1 0.093128 1 0.56728 1 10q loss 6 (6%) 98 0.021223 1 0.66557 1 1 1 0.39661 1 0.20776 1 0.15075 1 0.1836 1 0.37783 1 11p loss 8 (8%) 96 0.0046863 1 0.051514 1 0.71443 1 NA NA 0.31466 1 NA NA 0.52711 1 0.17393 1 11q loss 9 (9%) 95 0.021245 1 0.066758 1 1 1 NA NA 0.05337 1 0.55488 1 0.58305 1 0.064074 1 13q loss 9 (9%) 95 0.023819 1 0.42822 1 0.0052103 1 NA NA 0.20027 1 0.50105 1 0.68451 1 0.28257 1 14q loss 19 (18%) 85 0.92543 1 0.37858 1 0.41823 1 0.37708 1 0.71534 1 0.47239 1 0.24005 1 0.42129 1 15q loss 10 (10%) 94 0.062339 1 0.36597 1 0.72516 1 0.65354 1 0.13528 1 1 1 0.84146 1 0.23685 1 16q loss 3 (3%) 101 NA NA NA NA 0.03286 1 NA NA 0.53101 1 NA NA 0.62781 1 0.35632 1 17p loss 5 (5%) 99 1.5597e-07 6.39e-05 0.49097 1 0.038326 1 NA NA 0.14914 1 0.33613 1 0.093128 1 0.0423 1 18p loss 15 (14%) 89 0.0020121 0.805 0.85983 1 1 1 0.34189 1 0.10795 1 0.33764 1 0.78875 1 0.27636 1 18q loss 16 (15%) 88 0.0020121 0.805 0.85983 1 0.77312 1 0.34189 1 0.054348 1 0.33764 1 0.80277 1 0.13795 1 19p loss 4 (4%) 100 0.64893 1 0.5823 1 1 1 NA NA 0.58874 1 NA NA 0.62781 1 0.2681 1 19q loss 3 (3%) 101 0.7496 1 0.87704 1 1 1 NA NA 0.36284 1 NA NA NA NA NA NA 21q loss 11 (11%) 93 0.15211 1 0.43216 1 0.49748 1 NA NA 0.66506 1 1 1 1 1 0.23685 1 22q loss 20 (19%) 84 0.75155 1 0.69917 1 0.10929 1 0.44484 1 0.1621 1 0.44733 1 0.19219 1 0.2085 1 Xq loss 3 (3%) 101 0.7496 1 0.91492 1 1 1 NA NA 1 1 NA NA NA NA 1 1