name nmut n_coding n_flank n_coding_nonsilent fracflank callscheme callscheme_name N_tot nsil_tot nnon_tot rate_sil rate_non TCGA-A4-7286-01A-11D-2136-08 48 43 5 32 1.041667e-01 1 exome+100bp flanks 34834024 11 32 3.157832e-07 9.186421e-07 TCGA-A4-7287-01A-11D-2136-08 48 47 1 37 2.083333e-02 1 exome+100bp flanks 34834024 10 37 2.870756e-07 1.062180e-06 TCGA-A4-7288-01A-11D-2136-08 79 78 1 62 1.265823e-02 0 coding only 34834024 16 62 4.593210e-07 1.779869e-06 TCGA-A4-7583-01A-11D-2136-08 70 67 3 55 4.285714e-02 1 exome+100bp flanks 34834024 12 54 3.444908e-07 1.550208e-06 TCGA-A4-7584-01A-11D-2136-08 85 82 3 65 3.529412e-02 1 exome+100bp flanks 34834024 17 63 4.880286e-07 1.808577e-06 TCGA-A4-7585-01A-11D-2136-08 98 96 2 81 2.040816e-02 0 coding only 34834024 14 80 4.019059e-07 2.296605e-06 TCGA-A4-7732-01A-11D-2136-08 73 71 2 62 2.739726e-02 0 coding only 34834024 9 59 2.583681e-07 1.693746e-06 TCGA-A4-7734-01A-11D-2136-08 61 59 2 49 3.278689e-02 1 exome+100bp flanks 34834024 10 49 2.870756e-07 1.406671e-06 TCGA-A4-7828-01A-11D-2136-08 42 40 2 33 4.761905e-02 1 exome+100bp flanks 34834024 7 33 2.009530e-07 9.473496e-07 TCGA-A4-7915-01A-11D-2201-08 35 34 1 28 2.857143e-02 1 exome+100bp flanks 34834024 6 28 1.722454e-07 8.038118e-07 TCGA-A4-7996-01A-11D-2201-08 97 96 1 73 1.030928e-02 0 coding only 34834024 23 73 6.602740e-07 2.095652e-06 TCGA-A4-7997-01A-11D-2201-08 83 81 2 60 2.409639e-02 0 coding only 34834024 21 60 6.028589e-07 1.722454e-06 TCGA-AL-3466-01A-01D-1252-08 63 60 3 47 4.761905e-02 1 exome+100bp flanks 34834024 13 45 3.731983e-07 1.291840e-06 TCGA-AL-3467-01A-01D-1252-08 33 33 0 26 0 1 exome+100bp flanks 34834024 7 25 2.009530e-07 7.176891e-07 TCGA-AL-3468-01A-01D-1252-08 126 118 8 91 6.349206e-02 1 exome+100bp flanks 34834024 26 89 7.463967e-07 2.554973e-06 TCGA-AL-3472-01A-01D-1252-08 66 65 1 53 1.515152e-02 0 coding only 34834024 12 50 3.444908e-07 1.435378e-06 TCGA-AL-3473-01A-01D-1252-08 84 78 6 66 7.142857e-02 1 exome+100bp flanks 34834024 12 64 3.444908e-07 1.837284e-06 TCGA-AL-7173-01A-11D-2136-08 69 68 1 56 1.449275e-02 0 coding only 34834024 12 54 3.444908e-07 1.550208e-06 TCGA-B1-5398-01A-02D-1589-08 130 128 2 92 1.538462e-02 0 coding only 34834024 35 92 1.004765e-06 2.641096e-06 TCGA-B3-3925-01A-01D-1252-08 100 96 4 72 4.000000e-02 1 exome+100bp flanks 34834024 24 70 6.889816e-07 2.009530e-06 TCGA-B3-3925-01A-01D-1458-08 92 86 6 63 6.521739e-02 1 exome+100bp flanks 34834024 21 61 6.028589e-07 1.751161e-06 TCGA-B3-3926-01A-01D-1252-08 29 28 1 23 3.448276e-02 1 exome+100bp flanks 34834024 4 23 1.148303e-07 6.602740e-07 TCGA-B3-4103-01A-01D-1252-08 91 87 4 69 4.395604e-02 1 exome+100bp flanks 34834024 17 69 4.880286e-07 1.980822e-06 TCGA-B3-4103-01A-01D-1458-08 87 82 5 64 5.747126e-02 1 exome+100bp flanks 34834024 18 64 5.167362e-07 1.837284e-06 TCGA-B3-4104-01A-01D-1252-08 133 126 7 96 5.263158e-02 1 exome+100bp flanks 34834024 30 96 8.612269e-07 2.755926e-06 TCGA-B3-4104-01A-01D-1458-08 135 129 6 98 4.444444e-02 1 exome+100bp flanks 34834024 31 97 8.899345e-07 2.784634e-06 TCGA-B9-4113-01A-01D-1252-08 88 87 1 67 1.136364e-02 0 coding only 34834024 19 66 5.454437e-07 1.894699e-06 TCGA-B9-4114-01A-01D-1252-08 100 98 2 78 2.000000e-02 0 coding only 34834024 20 78 5.741513e-07 2.239190e-06 TCGA-B9-4115-01A-01D-1252-08 79 78 1 53 1.265823e-02 0 coding only 34834024 25 51 7.176891e-07 1.464086e-06 TCGA-B9-4116-01A-01D-1252-08 109 107 2 84 1.834862e-02 0 coding only 34834024 22 82 6.315664e-07 2.354020e-06 TCGA-B9-4117-01A-01D-1252-08 69 66 3 54 4.347826e-02 1 exome+100bp flanks 34834024 12 52 3.444908e-07 1.492793e-06 TCGA-B9-4617-01A-01D-1252-08 78 73 5 59 6.410256e-02 1 exome+100bp flanks 34834024 13 58 3.731983e-07 1.665039e-06 TCGA-B9-5155-01A-01D-1589-08 137 134 3 104 2.189781e-02 0 coding only 34834024 30 104 8.612269e-07 2.985587e-06 TCGA-B9-5156-01A-01D-1589-08 101 100 1 79 9.900990e-03 0 coding only 34834024 20 78 5.741513e-07 2.239190e-06 TCGA-B9-7268-01A-11D-2136-08 61 58 3 40 4.918033e-02 1 exome+100bp flanks 34834024 18 38 5.167362e-07 1.090887e-06 TCGA-BQ-5875-01A-11D-1589-08 88 83 5 65 5.681818e-02 1 exome+100bp flanks 34834024 18 64 5.167362e-07 1.837284e-06 TCGA-BQ-5876-01A-11D-1589-08 96 93 3 76 3.125000e-02 1 exome+100bp flanks 34834024 17 75 4.880286e-07 2.153067e-06 TCGA-BQ-5877-01A-11D-1589-08 90 86 4 73 4.444444e-02 1 exome+100bp flanks 34834024 13 73 3.731983e-07 2.095652e-06 TCGA-BQ-5878-01A-11D-1589-08 131 128 3 90 2.290076e-02 0 coding only 34834024 37 87 1.062180e-06 2.497558e-06 TCGA-BQ-5879-01A-11D-1589-08 33 32 1 23 3.030303e-02 1 exome+100bp flanks 34834024 8 23 2.296605e-07 6.602740e-07 TCGA-BQ-5880-01A-11D-1589-08 70 68 2 55 2.857143e-02 0 coding only 34834024 13 52 3.731983e-07 1.492793e-06 TCGA-BQ-5881-01A-11D-1589-08 49 46 3 38 6.122449e-02 1 exome+100bp flanks 34834024 8 38 2.296605e-07 1.090887e-06 TCGA-BQ-5882-01A-11D-1589-08 81 80 1 61 1.234568e-02 0 coding only 34834024 19 60 5.454437e-07 1.722454e-06 TCGA-BQ-5883-01A-11D-1589-08 50 43 7 35 1.400000e-01 1 exome+100bp flanks 34834024 7 33 2.009530e-07 9.473496e-07 TCGA-BQ-5884-01A-11D-1589-08 65 64 1 51 1.538462e-02 0 coding only 34834024 12 49 3.444908e-07 1.406671e-06 TCGA-BQ-5885-01A-11D-1589-08 125 124 1 100 8.000000e-03 0 coding only 34834024 24 99 6.889816e-07 2.842049e-06 TCGA-BQ-5886-01A-11D-1589-08 72 71 1 59 1.388889e-02 0 coding only 34834024 12 59 3.444908e-07 1.693746e-06 TCGA-BQ-5887-01A-11D-1961-08 29 28 1 22 3.448276e-02 1 exome+100bp flanks 34834024 6 18 1.722454e-07 5.167362e-07 TCGA-BQ-5888-01A-11D-1589-08 30 26 4 18 1.333333e-01 1 exome+100bp flanks 34834024 7 18 2.009530e-07 5.167362e-07 TCGA-BQ-5889-01A-11D-1589-08 71 67 4 52 5.633803e-02 1 exome+100bp flanks 34834024 15 52 4.306135e-07 1.492793e-06 TCGA-BQ-5890-01A-11D-1589-08 97 94 3 75 3.092784e-02 1 exome+100bp flanks 34834024 18 74 5.167362e-07 2.124360e-06 TCGA-BQ-5891-01A-11D-1589-08 44 43 1 27 2.272727e-02 1 exome+100bp flanks 34834024 16 26 4.593210e-07 7.463967e-07 TCGA-BQ-5892-01A-11D-1589-08 86 84 2 71 2.325581e-02 0 coding only 34834024 13 70 3.731983e-07 2.009530e-06 TCGA-BQ-5893-01A-11D-1589-08 63 60 3 42 4.761905e-02 1 exome+100bp flanks 34834024 18 41 5.167362e-07 1.177010e-06 TCGA-BQ-5894-01A-11D-1589-08 41 40 1 34 2.439024e-02 1 exome+100bp flanks 34834024 6 33 1.722454e-07 9.473496e-07 TCGA-BQ-7044-01A-11D-1961-08 89 87 2 68 2.247191e-02 0 coding only 34834024 18 68 5.167362e-07 1.952114e-06 TCGA-BQ-7045-01A-31D-1961-08 94 90 4 65 4.255319e-02 1 exome+100bp flanks 34834024 23 65 6.602740e-07 1.865992e-06 TCGA-BQ-7046-01A-11D-1961-08 51 49 2 39 3.921569e-02 1 exome+100bp flanks 34834024 10 38 2.870756e-07 1.090887e-06 TCGA-BQ-7048-01A-11D-1961-08 91 89 2 70 2.197802e-02 0 coding only 34834024 19 69 5.454437e-07 1.980822e-06 TCGA-BQ-7049-01A-11D-1961-08 41 39 2 30 4.878049e-02 1 exome+100bp flanks 34834024 9 29 2.583681e-07 8.325194e-07 TCGA-BQ-7050-01A-11D-1961-08 26 24 2 20 7.692308e-02 1 exome+100bp flanks 34834024 4 20 1.148303e-07 5.741513e-07 TCGA-BQ-7051-01A-12D-1961-08 111 109 2 79 1.801802e-02 0 coding only 34834024 30 77 8.612269e-07 2.210482e-06 TCGA-BQ-7053-01A-11D-1961-08 67 65 2 52 2.985075e-02 0 coding only 34834024 13 49 3.731983e-07 1.406671e-06 TCGA-BQ-7055-01A-11D-1961-08 16 12 4 8 2.500000e-01 1 exome+100bp flanks 34834024 3 8 8.612269e-08 2.296605e-07 TCGA-BQ-7056-01A-11D-1961-08 46 43 3 33 6.521739e-02 1 exome+100bp flanks 34834024 10 33 2.870756e-07 9.473496e-07 TCGA-BQ-7058-01A-11D-1961-08 86 86 0 72 0 0 coding only 34834024 14 68 4.019059e-07 1.952114e-06 TCGA-BQ-7059-01A-11D-1961-08 89 86 3 64 3.370787e-02 1 exome+100bp flanks 34834024 21 64 6.028589e-07 1.837284e-06 TCGA-BQ-7060-01A-11D-1961-08 46 45 1 36 2.173913e-02 1 exome+100bp flanks 34834024 9 34 2.583681e-07 9.760572e-07 TCGA-BQ-7061-01A-11D-1961-08 91 89 2 73 2.197802e-02 0 coding only 34834024 16 73 4.593210e-07 2.095652e-06 TCGA-BQ-7062-01A-11D-1961-08 50 48 2 39 4.000000e-02 1 exome+100bp flanks 34834024 8 36 2.296605e-07 1.033472e-06 TCGA-DW-5560-01A-01D-1589-08 42 39 3 30 7.142857e-02 1 exome+100bp flanks 34834024 9 28 2.583681e-07 8.038118e-07 TCGA-DW-5561-01A-01D-1589-08 53 53 0 40 0 0 coding only 34834024 12 38 3.444908e-07 1.090887e-06 TCGA-DW-7834-01A-11D-2136-08 71 70 1 51 1.408451e-02 0 coding only 34834024 19 51 5.454437e-07 1.464086e-06 TCGA-DW-7837-01A-11D-2136-08 36 36 0 26 0 1 exome+100bp flanks 34834024 10 26 2.870756e-07 7.463967e-07 TCGA-DW-7838-01A-11D-2136-08 100 100 0 75 0 0 coding only 34834024 24 74 6.889816e-07 2.124360e-06 TCGA-DW-7839-01A-11D-2136-08 49 49 0 44 0 1 exome+100bp flanks 34834024 4 43 1.148303e-07 1.234425e-06 TCGA-DW-7840-01A-11D-2136-08 103 99 4 79 3.883495e-02 1 exome+100bp flanks 34834024 20 78 5.741513e-07 2.239190e-06 TCGA-DW-7841-01A-11D-2136-08 64 61 3 48 4.687500e-02 1 exome+100bp flanks 34834024 12 47 3.444908e-07 1.349256e-06 TCGA-DW-7842-01A-11D-2136-08 30 29 1 25 3.333333e-02 1 exome+100bp flanks 34834024 4 25 1.148303e-07 7.176891e-07 TCGA-DZ-6131-01A-11D-1961-08 36 35 1 24 2.777778e-02 1 exome+100bp flanks 34834024 11 24 3.157832e-07 6.889816e-07 TCGA-DZ-6132-01A-11D-1961-08 137 136 1 117 7.299270e-03 0 coding only 34834024 19 116 5.454437e-07 3.330078e-06 TCGA-DZ-6133-01A-11D-1961-08 132 129 3 103 2.272727e-02 0 coding only 34834024 26 102 7.463967e-07 2.928172e-06 TCGA-DZ-6134-01A-11D-1961-08 60 59 1 42 1.666667e-02 0 coding only 34834024 16 39 4.593210e-07 1.119595e-06 TCGA-DZ-6135-01A-11D-1961-08 40 37 3 24 7.500000e-02 1 exome+100bp flanks 34834024 13 24 3.731983e-07 6.889816e-07 TCGA-EV-5901-01A-11D-1589-08 46 45 1 36 2.173913e-02 1 exome+100bp flanks 34834024 9 36 2.583681e-07 1.033472e-06 TCGA-EV-5902-01A-11D-1589-08 100 99 1 81 1.000000e-02 0 coding only 34834024 17 79 4.880286e-07 2.267898e-06 TCGA-EV-5903-01A-11D-1589-08 126 125 1 100 7.936508e-03 0 coding only 34834024 25 99 7.176891e-07 2.842049e-06 TCGA-G7-6789-01A-11D-1961-08 30 29 1 21 3.333333e-02 1 exome+100bp flanks 34834024 8 21 2.296605e-07 6.028589e-07 TCGA-G7-6790-01A-11D-1961-08 78 78 0 61 0 0 coding only 34834024 16 60 4.593210e-07 1.722454e-06 TCGA-G7-6792-01A-21D-1961-08 43 42 1 29 2.325581e-02 1 exome+100bp flanks 34834024 13 29 3.731983e-07 8.325194e-07 TCGA-G7-6793-01A-11D-1961-08 45 44 1 36 2.222222e-02 1 exome+100bp flanks 34834024 8 35 2.296605e-07 1.004765e-06 TCGA-G7-6795-01A-11D-1961-08 86 84 2 65 2.325581e-02 0 coding only 34834024 19 65 5.454437e-07 1.865992e-06 TCGA-G7-6796-01A-11D-1961-08 66 64 2 50 3.030303e-02 1 exome+100bp flanks 34834024 14 50 4.019059e-07 1.435378e-06 TCGA-G7-6797-01A-11D-1961-08 104 101 3 86 2.884615e-02 0 coding only 34834024 15 86 4.306135e-07 2.468851e-06 TCGA-G7-7501-01A-11D-2201-08 47 46 1 34 2.127660e-02 1 exome+100bp flanks 34834024 10 34 2.870756e-07 9.760572e-07 TCGA-G7-7502-01A-11D-2201-08 80 77 3 60 3.750000e-02 1 exome+100bp flanks 34834024 17 59 4.880286e-07 1.693746e-06 TCGA-GL-6846-01A-11D-1961-08 84 82 2 62 2.380952e-02 0 coding only 34834024 19 62 5.454437e-07 1.779869e-06 TCGA-GL-7773-01A-11D-2136-08 133 131 2 101 1.503759e-02 0 coding only 34834024 30 99 8.612269e-07 2.842049e-06 TCGA-GL-7966-01A-11D-2201-08 51 49 2 33 3.921569e-02 1 exome+100bp flanks 34834024 16 33 4.593210e-07 9.473496e-07 TCGA-HE-7128-01A-11D-1961-08 51 51 0 44 0 0 coding only 34834024 7 44 2.009530e-07 1.263133e-06 TCGA-HE-7129-01A-11D-1961-08 81 78 3 61 3.703704e-02 1 exome+100bp flanks 34834024 17 61 4.880286e-07 1.751161e-06 TCGA-HE-7130-01A-11D-1961-08 220 217 3 173 1.363636e-02 0 coding only 34834024 44 170 1.263133e-06 4.880286e-06 TCGA-J7-6720-01A-11D-2136-08 48 44 4 34 8.333333e-02 1 exome+100bp flanks 34834024 10 31 2.870756e-07 8.899345e-07