Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE HISTOLOGICAL.TYPE PATHOLOGY.T PATHOLOGY.N PATHOLOGICSPREAD(M) TUMOR.STAGE RADIATIONS.RADIATION.REGIMENINDICATION NUMBERPACKYEARSSMOKED TOBACCOSMOKINGHISTORYINDICATOR YEAROFTOBACCOSMOKINGONSET COMPLETENESS.OF.RESECTION nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 23 (7%) 302 0.85751 1 0.85316 1 0.048911 1 NA NA 2.8817e-08 3.14e-05 0.037874 1 1 1 0.032129 1 0.017023 1 0.55982 1 0.56637 1 0.36753 1 0.4155 1 0.60227 1 1q gain 69 (21%) 256 0.3862 1 0.46815 1 0.87782 1 0.3579 1 0.0045343 1 0.18233 1 0.83158 1 0.2669 1 0.45226 1 1 1 0.2586 1 1 1 0.52005 1 0.55753 1 2p gain 76 (23%) 249 0.51454 1 0.87499 1 0.070594 1 0.12597 1 0.010599 1 0.12476 1 0.13991 1 0.17264 1 0.10348 1 0.13737 1 0.020969 1 0.72581 1 0.020079 1 0.78925 1 2q gain 36 (11%) 289 0.19825 1 0.4738 1 0.42491 1 0.9034 1 8.5758e-05 0.0926 0.20757 1 0.48569 1 0.168 1 0.0029888 1 0.11049 1 0.13007 1 0.93793 1 0.29535 1 1 1 3p gain 34 (10%) 291 0.49515 1 0.12745 1 0.060866 1 0.19686 1 0.97729 1 0.040251 1 0.79624 1 0.49842 1 0.51953 1 1 1 0.35598 1 0.068803 1 0.056065 1 0.79128 1 3q gain 147 (45%) 178 0.87578 1 0.21147 1 0.89914 1 0.24754 1 0.35216 1 0.37327 1 0.87074 1 0.43738 1 0.66916 1 0.55351 1 0.77082 1 0.041654 1 0.024638 1 0.87772 1 4p gain 14 (4%) 311 0.33008 1 0.63565 1 0.024769 1 0.7119 1 0.7632 1 0.13091 1 1 1 0.69225 1 0.63184 1 1 1 0.35385 1 0.75761 1 0.40403 1 0.19873 1 4q gain 6 (2%) 319 0.92199 1 0.14034 1 0.34396 1 NA NA 0.18818 1 0.30634 1 0.66324 1 1 1 0.26567 1 1 1 0.15354 1 0.12195 1 NA NA 1 1 5p gain 152 (47%) 173 0.41129 1 0.071583 1 0.52456 1 0.80926 1 0.3277 1 0.037576 1 0.38223 1 0.62985 1 0.6709 1 1 1 0.48884 1 0.041205 1 0.81477 1 0.019252 1 5q gain 34 (10%) 291 0.86196 1 0.28595 1 0.8387 1 0.4533 1 0.97729 1 0.93285 1 0.42739 1 1 1 0.59779 1 0.32259 1 0.90564 1 0.63776 1 0.29491 1 0.79128 1 6p gain 31 (10%) 294 0.88518 1 0.32654 1 1 1 0.28646 1 0.033734 1 0.1107 1 0.65745 1 0.39524 1 0.12315 1 0.28264 1 0.41566 1 0.60305 1 0.012951 1 0.20329 1 6q gain 18 (6%) 307 0.63807 1 0.42955 1 1 1 0.4632 1 0.0014803 1 0.64623 1 1 1 0.75032 1 0.95878 1 0.47107 1 0.28758 1 0.71025 1 0.18624 1 0.12486 1 7p gain 90 (28%) 235 0.22832 1 0.15799 1 0.47754 1 0.80747 1 0.37897 1 0.0039268 1 0.74156 1 0.32567 1 0.44825 1 0.73367 1 0.060506 1 0.42656 1 0.35457 1 0.50037 1 7q gain 85 (26%) 240 0.50024 1 0.39329 1 0.31359 1 0.35508 1 0.46949 1 0.0091373 1 0.72083 1 0.11992 1 0.32325 1 0.73434 1 0.77159 1 0.78582 1 0.51951 1 0.45806 1 8p gain 45 (14%) 280 0.88691 1 0.25495 1 0.85491 1 0.0063787 1 0.095864 1 0.59828 1 0.40423 1 0.031218 1 0.19102 1 0.18421 1 0.6771 1 0.70831 1 0.61515 1 0.29082 1 8q gain 95 (29%) 230 0.32335 1 0.30087 1 0.78078 1 0.20916 1 0.86918 1 0.20861 1 0.71463 1 0.037708 1 0.094339 1 0.30943 1 0.28365 1 0.27275 1 0.26247 1 0.19017 1 9p gain 19 (6%) 306 0.21401 1 0.71987 1 0.27852 1 NA NA 0.0012662 1 0.5323 1 0.70424 1 1 1 0.79464 1 1 1 0.92763 1 0.87895 1 0.88244 1 0.52525 1 9q gain 28 (9%) 297 0.19752 1 0.40237 1 0.65706 1 0.53685 1 0.42307 1 0.38242 1 0.83704 1 0.17711 1 0.72485 1 0.60809 1 0.66642 1 0.61921 1 0.73955 1 1 1 10p gain 17 (5%) 308 0.98144 1 0.74609 1 1 1 0.93626 1 0.9664 1 0.57001 1 0.06926 1 0.23088 1 0.029984 1 0.45148 1 0.17869 1 0.23536 1 0.327 1 0.22335 1 10q gain 7 (2%) 318 0.57114 1 0.69931 1 1 1 NA NA 0.99402 1 0.38686 1 0.41942 1 1 1 0.32742 1 0.21598 1 0.58154 1 0.047082 1 0.77094 1 1 1 11p gain 20 (6%) 305 0.90161 1 0.31974 1 0.4262 1 1.9981e-06 0.00217 0.95419 1 0.012278 1 0.32404 1 1 1 0.51557 1 0.50835 1 0.1481 1 0.85116 1 0.54105 1 0.78524 1 11q gain 22 (7%) 303 0.73497 1 0.58836 1 0.21634 1 0.52069 1 0.93166 1 0.051249 1 0.21679 1 0.77612 1 0.12298 1 0.54323 1 0.56156 1 0.47827 1 0.98652 1 1 1 12p gain 90 (28%) 235 0.86765 1 0.93873 1 0.0043735 1 0.077351 1 0.88447 1 0.14907 1 0.80415 1 0.86176 1 0.90261 1 0.50467 1 0.96494 1 0.40382 1 0.40419 1 0.69775 1 12q gain 41 (13%) 284 0.5694 1 0.87214 1 0.012242 1 0.37758 1 0.97793 1 0.27492 1 0.089134 1 0.30387 1 0.2015 1 0.63579 1 0.47991 1 0.3433 1 0.98683 1 0.61011 1 13q gain 8 (2%) 317 0.27526 1 0.93745 1 0.68489 1 NA NA 0.99223 1 0.26335 1 1 1 0.25167 1 0.6705 1 1 1 0.56564 1 0.12347 1 0.68135 1 1 1 14q gain 31 (10%) 294 0.030755 1 0.064363 1 0.82984 1 0.85798 1 0.97358 1 0.49194 1 0.33827 1 0.55198 1 0.75586 1 1 1 0.61237 1 0.24544 1 0.75233 1 0.38248 1 15q gain 30 (9%) 295 0.67992 1 0.96988 1 1 1 0.38928 1 0.48182 1 0.64192 1 0.41242 1 0.83351 1 0.7447 1 1 1 0.44717 1 0.023699 1 0.36522 1 0.4989 1 16p gain 15 (5%) 310 0.7785 1 0.3108 1 0.37074 1 0.068098 1 0.79923 1 0.015622 1 0.67812 1 1 1 0.61022 1 1 1 0.80567 1 0.43685 1 0.12113 1 1 1 16q gain 19 (6%) 306 0.85637 1 0.10861 1 0.17486 1 0.36575 1 0.95844 1 0.0040728 1 0.22815 1 0.29211 1 0.15327 1 1 1 0.94034 1 0.92205 1 0.01249 1 0.80223 1 17p gain 9 (3%) 316 0.34613 1 0.83903 1 0.11844 1 NA NA 3.7919e-07 0.000412 0.55011 1 0.41862 1 0.29362 1 0.095 1 1 1 0.9482 1 0.14258 1 0.02319 1 0.49974 1 17q gain 35 (11%) 290 0.70397 1 0.3826 1 0.042069 1 0.1205 1 0.60942 1 0.47715 1 0.020607 1 0.168 1 0.050512 1 0.33588 1 0.79118 1 0.56695 1 0.055767 1 0.064066 1 18p gain 54 (17%) 271 0.32868 1 0.14869 1 0.2332 1 0.19769 1 0.85752 1 0.33073 1 0.033649 1 0.071365 1 0.26782 1 1 1 0.64175 1 0.15812 1 0.64603 1 0.60736 1 18q gain 39 (12%) 286 0.64829 1 0.24773 1 0.6972 1 0.37758 1 0.69013 1 0.45173 1 0.32864 1 0.28296 1 0.92511 1 0.62795 1 0.16265 1 0.69585 1 0.24245 1 0.91384 1 19p gain 33 (10%) 292 0.43778 1 0.22697 1 0.67541 1 1.7696e-06 0.00192 5.6313e-06 0.0061 0.63371 1 0.37765 1 0.56639 1 0.63024 1 0.30928 1 0.59171 1 0.65633 1 0.83014 1 0.88969 1 19q gain 46 (14%) 279 0.66717 1 0.82024 1 1 1 0.13881 1 0.00056485 0.609 0.85435 1 0.11229 1 0.07475 1 0.05744 1 0.65887 1 0.87866 1 0.86315 1 0.16175 1 0.86023 1 20p gain 91 (28%) 234 0.76505 1 0.063715 1 0.02305 1 0.27865 1 0.17288 1 0.94187 1 0.62227 1 0.040791 1 0.1525 1 0.18993 1 0.74053 1 0.77885 1 0.19833 1 0.29744 1 20q gain 80 (25%) 245 0.67304 1 0.26554 1 0.13933 1 0.76985 1 0.098514 1 0.96998 1 0.50068 1 0.080523 1 0.12965 1 0.14701 1 0.65813 1 0.66099 1 0.57164 1 0.25296 1 21q gain 18 (6%) 307 0.26823 1 0.68199 1 1 1 0.94869 1 5.9588e-05 0.0645 0.23861 1 0.24863 1 0.72039 1 0.19145 1 0.47107 1 0.86516 1 0.48784 1 0.63058 1 0.093678 1 22q gain 77 (24%) 248 0.082608 1 0.36096 1 0.45838 1 0.7815 1 0.90583 1 0.20393 1 0.53007 1 1 1 0.11297 1 0.72613 1 0.93833 1 0.32832 1 0.60437 1 0.37168 1 Xq gain 9 (3%) 316 0.88142 1 0.28663 1 1 1 0.89065 1 0.99021 1 0.48348 1 0.8905 1 0.64229 1 0.6945 1 1 1 0.56306 1 1 1 0.96441 1 1 1 1p loss 48 (15%) 277 0.62238 1 0.79337 1 0.0020956 1 0.44976 1 0.11916 1 0.40011 1 0.33269 1 0.35928 1 0.19541 1 0.21172 1 0.59204 1 0.66425 1 0.54594 1 0.57397 1 1q loss 7 (2%) 318 0.77497 1 0.021441 1 0.6829 1 NA NA 0.99402 1 0.29433 1 0.41942 1 0.54927 1 0.16502 1 0.21598 1 0.25693 1 0.53919 1 0.18717 1 0.11924 1 2q loss 8 (2%) 317 0.078441 1 0.14822 1 1 1 NA NA 0.99223 1 0.60726 1 1 1 1 1 1 1 1 1 0.11193 1 0.03531 1 0.73132 1 1 1 3p loss 141 (43%) 184 0.88478 1 0.34509 1 0.79903 1 0.13798 1 0.40559 1 0.96094 1 0.91595 1 0.70132 1 0.96677 1 0.54138 1 0.55717 1 0.59252 1 0.39625 1 0.93566 1 3q loss 24 (7%) 301 0.095497 1 0.33625 1 0.808 1 0.65012 1 0.010062 1 0.48779 1 0.037404 1 0.30698 1 0.091379 1 1 1 0.10736 1 0.86365 1 0.053625 1 0.041496 1 4p loss 138 (42%) 187 0.10815 1 0.86304 1 1 1 0.27093 1 0.40578 1 0.35602 1 0.3185 1 0.24834 1 0.056774 1 1 1 0.56725 1 0.86976 1 0.293 1 0.66042 1 4q loss 119 (37%) 206 0.075909 1 0.50695 1 0.14803 1 0.13836 1 0.23539 1 0.52458 1 0.8909 1 0.32201 1 0.25633 1 0.53923 1 0.56934 1 0.62421 1 0.68479 1 0.8679 1 5p loss 22 (7%) 303 0.08763 1 0.23847 1 0.61261 1 0.49071 1 0.0060381 1 0.3176 1 0.35991 1 0.3357 1 0.87857 1 0.16597 1 0.99184 1 0.59617 1 0.17408 1 0.19011 1 5q loss 117 (36%) 208 0.26092 1 0.72306 1 0.69148 1 0.68351 1 0.23489 1 0.020681 1 0.24502 1 0.55789 1 0.037929 1 0.53334 1 0.55525 1 0.25294 1 0.022066 1 0.23073 1 6p loss 33 (10%) 292 0.92225 1 0.43979 1 0.089718 1 0.81777 1 0.018787 1 0.077454 1 0.2543 1 0.70089 1 0.13821 1 0.61127 1 0.82053 1 0.54218 1 0.92327 1 0.2767 1 6q loss 34 (10%) 291 0.54999 1 0.6469 1 0.8387 1 0.78876 1 0.022679 1 0.029376 1 0.56935 1 0.7123 1 0.18194 1 0.6132 1 0.25927 1 0.62398 1 0.28262 1 0.11411 1 7p loss 20 (6%) 305 0.73855 1 0.46724 1 0.79159 1 0.79553 1 0.95419 1 0.29422 1 0.21383 1 1 1 0.54684 1 0.50835 1 0.10311 1 0.42131 1 0.39421 1 0.047719 1 7q loss 10 (3%) 315 0.48542 1 0.81816 1 0.46191 1 NA NA 0.98797 1 0.12365 1 0.42309 1 1 1 0.92335 1 0.2948 1 0.16455 1 0.38647 1 0.59585 1 0.23028 1 8p loss 95 (29%) 230 0.38242 1 0.098266 1 0.57765 1 0.51878 1 0.86918 1 0.13368 1 0.69219 1 0.36025 1 0.63403 1 0.18578 1 0.053144 1 0.036627 1 0.35045 1 0.84344 1 8q loss 9 (3%) 316 0.84896 1 0.86266 1 0.45684 1 0.4632 1 0.46356 1 0.51624 1 0.6917 1 1 1 0.54203 1 1 1 0.80102 1 0.40536 1 0.047635 1 0.54756 1 9p loss 134 (41%) 191 0.76312 1 0.37414 1 0.43979 1 0.30009 1 0.40391 1 0.85387 1 0.48246 1 0.65367 1 0.75229 1 0.76567 1 0.10762 1 0.7356 1 0.31208 1 0.29151 1 9q loss 84 (26%) 241 0.92757 1 0.0044207 1 0.77174 1 0.76794 1 0.15997 1 0.20415 1 0.71254 1 0.1726 1 0.71694 1 1 1 0.66297 1 0.60891 1 0.071432 1 0.59338 1 10p loss 71 (22%) 254 0.43064 1 0.59207 1 0.22177 1 0.96319 1 0.36265 1 0.79653 1 0.32687 1 0.44108 1 0.32705 1 0.13031 1 0.92865 1 0.42115 1 0.55641 1 0.60468 1 10q loss 70 (22%) 255 0.37805 1 0.99838 1 0.8775 1 0.83239 1 0.35333 1 0.97999 1 0.87659 1 0.21075 1 0.33889 1 0.12959 1 0.18558 1 0.73361 1 0.079694 1 0.58218 1 11p loss 47 (14%) 278 0.40634 1 0.60873 1 0.85682 1 0.71223 1 0.18048 1 0.67393 1 0.43102 1 0.40427 1 0.84566 1 0.20241 1 0.35782 1 0.54826 1 0.96315 1 0.71543 1 11q loss 28 (9%) 297 0.62615 1 0.13046 1 0.49598 1 0.96339 1 0.91391 1 0.51062 1 0.079591 1 0.81188 1 0.48485 1 0.24291 1 0.88318 1 0.80251 1 0.93733 1 0.31892 1 12p loss 4 (1%) 321 0.50974 1 0.014513 1 0.27022 1 NA NA 1.3235e-16 1.44e-13 0.53234 1 1 1 0.36433 1 0.54892 1 1 1 NA NA 0.25602 1 0.33906 1 1 1 12q loss 4 (1%) 321 0.8638 1 0.18489 1 0.27022 1 NA NA 1.3235e-16 1.44e-13 0.18507 1 0.54253 1 0.36433 1 0.34958 1 1 1 NA NA 0.19538 1 0.32651 1 1 1 13q loss 122 (38%) 203 0.032407 1 0.48477 1 0.69379 1 0.074447 1 0.33998 1 0.9582 1 0.11559 1 0.41748 1 0.015417 1 0.75281 1 0.72718 1 0.26144 1 0.0073409 1 0.68606 1 14q loss 60 (18%) 265 0.19503 1 0.21097 1 0.071892 1 0.22732 1 0.16672 1 0.019306 1 0.1586 1 0.43348 1 0.43434 1 0.43265 1 0.75832 1 0.42701 1 0.19035 1 0.90383 1 15q loss 38 (12%) 287 0.68482 1 0.44468 1 0.046937 1 0.83603 1 0.067795 1 0.030951 1 0.22285 1 0.46163 1 0.053227 1 1 1 0.44691 1 0.13452 1 0.83369 1 0.50583 1 16p loss 48 (15%) 277 0.18803 1 0.75422 1 0.85785 1 0.4533 1 0.7747 1 0.74984 1 0.56086 1 0.78891 1 0.91379 1 1 1 0.31884 1 0.93112 1 0.68431 1 0.86465 1 16q loss 60 (18%) 265 0.1332 1 0.16365 1 0.14074 1 1.7696e-06 0.00192 0.67422 1 0.79999 1 0.4344 1 0.13793 1 0.79193 1 0.43265 1 0.075458 1 0.29919 1 0.58968 1 0.25103 1 17p loss 115 (35%) 210 0.20303 1 0.87475 1 0.35351 1 0.013488 1 0.54202 1 0.34643 1 0.19582 1 0.31514 1 0.94201 1 0.52812 1 0.36146 1 0.27971 1 0.75892 1 0.94835 1 17q loss 19 (6%) 306 0.79112 1 0.75951 1 0.03172 1 0.4533 1 0.95844 1 0.47275 1 0.74043 1 0.11739 1 0.29558 1 0.49002 1 0.33154 1 0.51552 1 0.13619 1 0.051024 1 18p loss 33 (10%) 292 0.59883 1 0.37835 1 0.67541 1 0.7527 1 0.88366 1 0.95249 1 0.39247 1 0.27011 1 0.34485 1 0.61127 1 0.093596 1 0.87102 1 0.22992 1 0.5988 1 18q loss 63 (19%) 262 0.35142 1 0.11489 1 0.20263 1 0.96319 1 0.31324 1 0.48196 1 0.80199 1 0.22418 1 0.90507 1 0.69796 1 0.21867 1 0.31866 1 0.2895 1 0.41214 1 19p loss 53 (16%) 272 0.071551 1 0.81827 1 0.86445 1 0.11795 1 0.14154 1 0.37738 1 0.095426 1 0.15805 1 0.17246 1 0.020384 1 0.96074 1 0.14592 1 0.11078 1 0.41064 1 19q loss 36 (11%) 289 0.57155 1 0.19745 1 0.83945 1 0.25981 1 0.0018669 1 0.56603 1 0.24846 1 0.59507 1 0.88237 1 0.11049 1 0.1564 1 0.26137 1 0.034969 1 0.0085966 1 20p loss 16 (5%) 309 0.060001 1 0.86781 1 1 1 NA NA 0.97008 1 0.38678 1 0.52409 1 0.72039 1 0.066268 1 1 1 0.90946 1 0.79526 1 0.70501 1 0.72784 1 20q loss 17 (5%) 308 0.37598 1 0.90724 1 0.57516 1 NA NA 0.9664 1 0.94495 1 0.40629 1 0.73527 1 0.83891 1 1 1 0.11962 1 0.89003 1 0.17754 1 0.19011 1 21q loss 99 (30%) 226 0.45378 1 0.31419 1 0.012506 1 0.56362 1 0.52966 1 0.50355 1 0.71883 1 0.2902 1 0.10045 1 0.74109 1 0.25257 1 0.94463 1 0.37408 1 0.7285 1 22q loss 33 (10%) 292 0.64801 1 0.12607 1 0.060463 1 0.32705 1 0.0011915 1 0.23478 1 0.0004219 0.455 0.28196 1 0.0029199 1 1 1 0.71452 1 0.40233 1 0.083572 1 0.18417 1 Xq loss 13 (4%) 312 0.8842 1 0.28373 1 0.32904 1 0.94869 1 6.6256e-05 0.0716 0.72876 1 0.15019 1 1 1 0.44914 1 1 1 0.68143 1 1 1 0.78798 1 1 1