Clinical Features Time to Death AGE GENDER HISTOLOGICAL.TYPE PATHOLOGY.T PATHOLOGY.N PATHOLOGICSPREAD(M) TUMOR.STAGE RADIATIONS.RADIATION.REGIMENINDICATION COMPLETENESS.OF.RESECTION NUMBER.OF.LYMPH.NODES nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Amp Peak 1(1p36.22) 24 (14%) 153 0.42723 1 0.99548 1 0.046444 1 0.15857 1 0.17296 1 0.38155 1 0.34661 1 0.25088 1 0.52173 1 0.62829 1 0.43991 1 Amp Peak 2(1q21.3) 55 (31%) 122 0.99625 1 0.09636 1 0.86879 1 0.15144 1 0.19165 1 0.33452 1 0.21085 1 0.74934 1 0.03297 1 0.38703 1 0.082275 1 Amp Peak 3(1q42.3) 53 (30%) 124 0.83831 1 0.68672 1 0.24002 1 0.023907 1 0.6211 1 0.64685 1 0.16673 1 0.66168 1 0.15928 1 0.91091 1 0.45741 1 Amp Peak 4(3q26.2) 50 (28%) 127 0.87256 1 0.54559 1 0.12509 1 0.077826 1 0.57294 1 0.89619 1 0.01765 1 0.73502 1 1 1 0.63631 1 0.69312 1 Amp Peak 5(5p15.33) 46 (26%) 131 0.78081 1 0.061735 1 0.080693 1 0.046554 1 0.024096 1 0.66524 1 1 1 0.092338 1 0.11115 1 0.55314 1 0.15881 1 Amp Peak 6(5p13.1) 44 (25%) 133 0.79159 1 0.12535 1 0.074702 1 0.6707 1 0.21521 1 0.24006 1 0.5466 1 0.017231 1 0.099008 1 0.30383 1 0.27371 1 Amp Peak 7(6p21.1) 47 (27%) 130 0.014107 1 0.14954 1 0.39004 1 0.23567 1 0.0070422 1 0.69653 1 0.093901 1 0.24469 1 0.1175 1 0.12562 1 0.37305 1 Amp Peak 8(6q12) 36 (20%) 141 0.81482 1 0.75085 1 1 1 0.56044 1 0.27803 1 0.8033 1 0.58299 1 0.8941 1 0.26856 1 0.26643 1 0.078633 1 Amp Peak 9(6q21) 30 (17%) 147 0.92045 1 0.91761 1 1 1 0.18383 1 0.62605 1 0.80327 1 0.57135 1 0.66555 1 0.19989 1 0.17555 1 0.34564 1 Amp Peak 10(7p22.3) 83 (47%) 94 0.6187 1 0.0026078 1 0.045195 1 0.46407 1 0.19434 1 0.77124 1 0.011294 1 0.60802 1 1 1 0.94092 1 0.42816 1 Amp Peak 11(7p11.2) 76 (43%) 101 0.65292 1 0.007427 1 0.064496 1 0.31004 1 0.069688 1 0.95853 1 0.069589 1 0.26099 1 0.39309 1 0.77698 1 0.93863 1 Amp Peak 12(7q21.2) 79 (45%) 98 0.97706 1 0.018512 1 0.03056 1 0.69461 1 0.18248 1 0.25292 1 0.023354 1 0.27094 1 1 1 0.87221 1 0.43975 1 Amp Peak 13(8p23.1) 63 (36%) 114 0.68608 1 0.43249 1 0.20256 1 0.74523 1 0.44715 1 0.81092 1 0.47432 1 0.38798 1 0.054795 1 0.15964 1 0.17705 1 Amp Peak 14(8q24.21) 109 (62%) 68 0.88488 1 0.010714 1 0.34648 1 0.2166 1 0.0012517 1 0.74298 1 0.45993 1 0.35505 1 1 1 0.091835 1 0.6229 1 Amp Peak 15(9p24.1) 24 (14%) 153 0.74802 1 0.85849 1 0.65426 1 0.72364 1 0.21225 1 0.39971 1 1 1 0.063162 1 0.13655 1 0.36045 1 0.43424 1 Amp Peak 16(9q34.3) 41 (23%) 136 0.28152 1 0.081976 1 1 1 0.11036 1 0.19369 1 0.64429 1 0.68659 1 0.14615 1 0.082178 1 0.78836 1 0.74637 1 Amp Peak 17(10q26.13) 36 (20%) 141 0.35651 1 0.18457 1 0.84911 1 0.55118 1 0.72234 1 0.97476 1 0.70895 1 0.66653 1 0.26856 1 0.95221 1 0.44896 1 Amp Peak 18(11p13) 29 (16%) 148 0.94402 1 0.51819 1 0.4067 1 0.66591 1 0.27927 1 0.27238 1 0.28967 1 0.43364 1 1 1 0.57154 1 0.23345 1 Amp Peak 19(11q13.3) 33 (19%) 144 0.14134 1 0.41616 1 0.018244 1 0.52718 1 0.61402 1 0.69567 1 0.37946 1 0.48738 1 1 1 0.67936 1 0.72025 1 Amp Peak 20(12p12.1) 40 (23%) 137 0.91881 1 0.60099 1 0.35981 1 0.3198 1 0.075241 1 0.018729 1 0.52737 1 0.013562 1 0.58922 1 0.11105 1 0.012658 1 Amp Peak 21(12q15) 40 (23%) 137 0.8422 1 0.83922 1 0.35981 1 0.90821 1 0.68371 1 0.072023 1 0.28914 1 0.3742 1 0.31605 1 0.3357 1 0.03499 1 Amp Peak 22(13q12.3) 64 (36%) 113 0.34496 1 0.99118 1 0.054835 1 0.73096 1 0.49279 1 0.067225 1 0.2882 1 0.16342 1 1 1 0.64566 1 0.019323 1 Amp Peak 23(13q22.1) 74 (42%) 103 0.81881 1 0.7784 1 0.0049374 1 0.58532 1 0.86651 1 0.88535 1 0.50512 1 0.060035 1 1 1 0.70523 1 0.63958 1 Amp Peak 24(15q26.1) 44 (25%) 133 0.59665 1 0.42031 1 0.15461 1 0.6758 1 0.18546 1 0.17829 1 0.26434 1 0.58195 1 0.59919 1 0.42332 1 0.090748 1 Amp Peak 25(17q12) 47 (27%) 130 0.9159 1 0.14505 1 0.057222 1 0.14726 1 0.14994 1 0.30702 1 0.0026873 1 0.44343 1 0.60961 1 0.0029945 1 0.24119 1 Amp Peak 26(18q11.2) 50 (28%) 127 0.042441 1 0.19009 1 0.23353 1 0.21613 1 0.20205 1 0.13665 1 0.51468 1 0.41051 1 0.13761 1 0.012491 1 0.16367 1 Amp Peak 27(19q12) 46 (26%) 131 0.18018 1 0.077435 1 0.72823 1 0.063067 1 0.062497 1 0.077634 1 0.3902 1 0.55235 1 0.016634 1 0.081569 1 0.013903 1 Amp Peak 28(20q13.2) 108 (61%) 69 0.40913 1 0.19407 1 0.00092875 0.763 0.099288 1 0.0016269 1 0.59253 1 0.44396 1 0.83257 1 1 1 0.87524 1 0.076802 1 Amp Peak 29(Xq26.2) 33 (19%) 144 0.7171 1 0.10275 1 0.8438 1 0.50564 1 0.94313 1 0.61309 1 0.6453 1 0.64243 1 0.58546 1 0.89487 1 0.70786 1 Del Peak 1(1p36.11) 43 (24%) 134 0.88166 1 0.66737 1 0.3703 1 0.36783 1 0.080755 1 0.95989 1 0.94017 1 0.48168 1 0.59624 1 0.041897 1 0.66545 1 Del Peak 2(1p13.2) 31 (18%) 146 0.33832 1 0.48606 1 0.68855 1 0.40045 1 0.67327 1 0.88425 1 0.58097 1 0.77278 1 1 1 0.40015 1 0.28552 1 Del Peak 3(1q44) 12 (7%) 165 0.01807 1 0.038885 1 0.76592 1 0.79035 1 0.12241 1 0.52175 1 0.49444 1 0.75216 1 1 1 0.16579 1 0.45665 1 Del Peak 4(2q32.1) 20 (11%) 157 0.34534 1 0.6952 1 0.80936 1 0.046611 1 0.32708 1 0.42782 1 0.36076 1 0.33284 1 0.45493 1 0.28766 1 0.51179 1 Del Peak 5(2q37.2) 23 (13%) 154 0.5364 1 0.037891 1 0.49345 1 0.0036667 1 0.34943 1 0.28916 1 0.1192 1 0.34725 1 0.50568 1 0.046216 1 0.0858 1 Del Peak 6(3p26.1) 47 (27%) 130 0.90636 1 0.12492 1 0.60638 1 0.7482 1 0.50297 1 0.13492 1 0.50077 1 0.60498 1 1 1 0.34563 1 0.79446 1 Del Peak 7(3p14.2) 58 (33%) 119 0.71505 1 0.92293 1 0.51635 1 0.23766 1 0.20184 1 0.60689 1 0.66669 1 0.31942 1 0.66322 1 0.01403 1 0.54421 1 Del Peak 8(3q26.31) 18 (10%) 159 0.70957 1 0.96756 1 0.6213 1 0.55349 1 0.43913 1 0.40864 1 0.10539 1 0.61903 1 0.41885 1 0.71888 1 0.096881 1 Del Peak 9(4q22.1) 66 (37%) 111 0.49639 1 0.10949 1 0.75288 1 0.2393 1 0.021912 1 0.17481 1 0.77179 1 0.44947 1 0.065034 1 0.22766 1 0.19733 1 Del Peak 10(4q34.3) 64 (36%) 113 0.87895 1 0.099606 1 0.52338 1 0.056388 1 0.018155 1 0.30903 1 0.76799 1 0.11147 1 0.35351 1 0.35222 1 0.82024 1 Del Peak 11(5q11.2) 48 (27%) 129 0.6 1 0.053175 1 0.60433 1 0.0028182 1 0.0061663 1 0.43938 1 0.26831 1 0.56355 1 0.61357 1 0.24333 1 0.36261 1 Del Peak 12(6p25.3) 39 (22%) 138 0.39071 1 0.71072 1 0.35863 1 0.017459 1 0.12912 1 0.31925 1 0.34905 1 0.86266 1 1 1 0.36988 1 0.14713 1 Del Peak 13(6q26) 41 (23%) 136 0.38037 1 0.85113 1 0.71792 1 0.66461 1 0.53779 1 0.52142 1 0.73296 1 0.75402 1 0.32805 1 0.10731 1 0.20868 1 Del Peak 14(7q31.1) 21 (12%) 156 0.065061 1 0.35082 1 0.15459 1 0.23152 1 0.70072 1 0.0008287 0.682 0.30418 1 0.48214 1 1 1 0.92142 1 0.74074 1 Del Peak 15(7q36.3) 31 (18%) 146 0.23803 1 0.80229 1 0.22737 1 0.31029 1 0.14977 1 0.0029091 1 1 1 0.028451 1 1 1 0.94769 1 0.09722 1 Del Peak 16(8p23.2) 45 (25%) 132 0.90239 1 0.011828 1 0.21778 1 0.43516 1 0.45676 1 0.21517 1 0.94332 1 0.36044 1 1 1 0.048311 1 0.069086 1 Del Peak 17(9p23) 70 (40%) 107 0.044988 1 0.34108 1 0.87586 1 0.29743 1 0.099404 1 0.19 1 0.59208 1 0.036274 1 0.38533 1 0.74926 1 0.023979 1 Del Peak 18(9p21.3) 66 (37%) 111 0.39405 1 0.53382 1 0.52877 1 0.51643 1 0.031342 1 0.47135 1 0.68588 1 0.83822 1 0.36304 1 0.55496 1 0.14482 1 Del Peak 19(9q21.11) 37 (21%) 140 0.39837 1 0.56097 1 0.57585 1 0.197 1 0.17976 1 0.8091 1 0.21745 1 0.25762 1 0.28034 1 0.83665 1 0.39095 1 Del Peak 20(10p14) 24 (14%) 153 0.14867 1 0.42415 1 0.65426 1 0.2196 1 0.18276 1 0.50776 1 0.67804 1 0.96099 1 0.52173 1 0.37243 1 0.50266 1 Del Peak 21(10q22.3) 24 (14%) 153 0.84599 1 0.085773 1 0.65426 1 0.31797 1 0.0095403 1 0.43768 1 0.38435 1 0.90387 1 0.52173 1 0.76988 1 0.20919 1 Del Peak 22(10q23.31) 38 (21%) 139 0.33169 1 0.073491 1 0.34933 1 0.12642 1 0.00018085 0.149 0.84976 1 0.81963 1 0.53002 1 1 1 0.93629 1 0.1432 1 Del Peak 23(11p15.4) 40 (23%) 137 0.27351 1 0.65917 1 0.5831 1 0.0013802 1 0.02109 1 0.41267 1 0.93803 1 0.88696 1 0.31605 1 0.10991 1 0.18765 1 Del Peak 24(11q23.2) 39 (22%) 138 0.14 1 0.71726 1 0.26604 1 0.226 1 0.48284 1 0.64697 1 0.23004 1 0.94923 1 0.3041 1 0.22307 1 0.2399 1 Del Peak 25(12p13.31) 26 (15%) 151 0.43621 1 0.1859 1 0.82915 1 0.24478 1 0.28412 1 0.81559 1 0.69344 1 0.16527 1 0.55258 1 0.08636 1 0.6165 1 Del Peak 26(13q14.2) 26 (15%) 151 0.47963 1 0.77115 1 0.27982 1 0.76686 1 0.38458 1 0.80967 1 0.25451 1 0.7517 1 0.1569 1 0.1102 1 0.19245 1 Del Peak 27(14q21.1) 41 (23%) 136 0.38074 1 0.65534 1 0.36334 1 0.19081 1 0.0026202 1 0.40935 1 0.019281 1 0.25524 1 0.32805 1 0.84198 1 0.69383 1 Del Peak 28(14q32.33) 46 (26%) 131 0.18138 1 0.60473 1 1 1 0.51878 1 0.16938 1 0.17035 1 0.0036536 1 0.13751 1 0.11115 1 0.17271 1 0.5569 1 Del Peak 29(15q11.2) 40 (23%) 137 0.44833 1 0.13039 1 0.35981 1 0.0013445 1 0.013144 1 0.14434 1 0.88185 1 0.38158 1 0.076942 1 0.4771 1 0.33338 1 Del Peak 30(15q15.1) 41 (23%) 136 0.44511 1 0.50984 1 0.27741 1 0.0060802 1 0.0065617 1 0.013565 1 0.32114 1 0.070206 1 0.082178 1 0.21216 1 0.089258 1 Del Peak 31(16p13.3) 23 (13%) 154 0.6822 1 0.00747 1 0.17744 1 0.0069139 1 0.55403 1 0.90109 1 0.26313 1 1 1 0.50568 1 0.026561 1 0.67122 1 Del Peak 32(16q23.1) 58 (33%) 119 0.12291 1 0.41744 1 0.032764 1 0.17041 1 0.058845 1 0.16095 1 0.10243 1 0.36207 1 0.33224 1 0.099845 1 0.07124 1 Del Peak 33(17p12) 60 (34%) 117 0.056184 1 0.60455 1 0.41915 1 0.044759 1 0.00068304 0.563 0.27151 1 0.39756 1 0.40525 1 0.045714 1 0.079268 1 0.90041 1 Del Peak 34(17q24.3) 27 (15%) 150 0.3571 1 0.01085 1 0.52736 1 0.044415 1 0.74803 1 0.038633 1 0.84223 1 0.77057 1 1 1 0.1935 1 0.45966 1 Del Peak 35(18q21.2) 69 (39%) 108 0.33591 1 0.98645 1 1 1 0.73557 1 0.0062248 1 0.027347 1 0.3975 1 0.54047 1 1 1 0.03444 1 0.0022489 1 Del Peak 36(18q23) 64 (36%) 113 0.38383 1 0.94108 1 0.8735 1 0.98822 1 0.012725 1 0.018524 1 0.34852 1 0.28196 1 0.058077 1 0.02291 1 0.014447 1 Del Peak 37(19p13.3) 53 (30%) 124 0.30804 1 0.36131 1 0.0076667 1 0.5263 1 0.25418 1 0.54909 1 0.33285 1 0.90534 1 0.02865 1 0.93098 1 0.16227 1 Del Peak 38(19q13.11) 24 (14%) 153 0.43407 1 0.17068 1 0.65426 1 0.017639 1 0.3112 1 0.23002 1 0.75056 1 0.8889 1 0.52173 1 0.56347 1 0.34206 1 Del Peak 39(20p12.1) 27 (15%) 150 0.062799 1 0.72596 1 0.83337 1 0.55045 1 0.47927 1 0.72888 1 0.70399 1 0.87307 1 0.16739 1 1 1 0.19861 1 Del Peak 40(20p12.1) 27 (15%) 150 0.062799 1 0.72596 1 0.83337 1 0.55045 1 0.47927 1 0.72888 1 0.70399 1 0.87307 1 0.16739 1 1 1 0.19861 1 Del Peak 41(21q11.2) 54 (31%) 123 0.87263 1 0.19172 1 0.61872 1 0.36861 1 0.022549 1 0.66756 1 0.78271 1 0.98361 1 0.64151 1 0.42721 1 0.52381 1 Del Peak 42(21q22.13) 58 (33%) 119 0.84617 1 0.29597 1 0.62361 1 0.4765 1 0.034143 1 0.33287 1 0.91723 1 0.83663 1 1 1 0.24177 1 0.33348 1 Del Peak 43(22q13.31) 53 (30%) 124 0.47409 1 0.27687 1 1 1 0.020742 1 0.08029 1 0.72015 1 0.41497 1 0.91278 1 0.15928 1 0.21548 1 0.40649 1 Del Peak 44(Xp22.2) 30 (17%) 147 0.40817 1 0.72085 1 0.83852 1 0.0060944 1 0.33112 1 0.69567 1 1 1 0.70682 1 1 1 0.7712 1 0.88068 1 Del Peak 45(Xp21.1) 30 (17%) 147 0.41237 1 0.35695 1 0.15143 1 0.056311 1 0.34481 1 0.36832 1 0.79368 1 0.90458 1 0.59039 1 0.022048 1 0.11517 1 Del Peak 46(Xq21.33) 22 (12%) 155 0.30542 1 0.62859 1 1 1 0.37888 1 0.12045 1 0.44372 1 0.73714 1 0.15717 1 0.48921 1 0.25925 1 0.77467 1