Molecular subtypes MRNA_CNMF MRNA_CHIERARCHICAL CN_CNMF METHLYATION_CNMF RPPA_CNMF RPPA_CHIERARCHICAL MRNASEQ_CNMF MRNASEQ_CHIERARCHICAL MIRSEQ_CNMF MIRSEQ_CHIERARCHICAL nCNV (%) nWild-Type Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Amp Peak 1(1p35.2) 50 (10%) 442 0.019107 1 0.043505 1 3.5036e-20 3e-17 4.7722e-07 0.000243 0.00010009 0.0429 0.26661 1 1.2184e-09 7.36e-07 8.4021e-12 5.67e-09 4.4446e-07 0.000227 1.1326e-08 6.42e-06 Amp Peak 2(1p34.2) 63 (13%) 429 0.0015041 0.54 0.0037915 1 2.0572e-28 1.87e-25 1.3624e-08 7.7e-06 0.0092404 1 0.56032 1 7.7958e-12 5.27e-09 4.9477e-14 3.64e-11 9.3855e-13 6.6e-10 3.5538e-13 2.54e-10 Amp Peak 3(1p22.3) 81 (16%) 411 0.023809 1 0.11479 1 1.9083e-08 1.06e-05 0.015274 1 0.73667 1 0.27974 1 0.0061164 1 0.010684 1 4.9438e-06 0.00237 0.0026974 0.92 Amp Peak 4(1q21.3) 220 (45%) 272 0.017656 1 0.022864 1 1.7009e-13 1.23e-10 0.0095063 1 0.31657 1 0.1348 1 0.010977 1 0.090053 1 2.2119e-05 0.01 7.7902e-05 0.0339 Amp Peak 5(1q22) 232 (47%) 260 0.017656 1 0.022864 1 4.2621e-15 3.25e-12 0.00028879 0.117 0.13161 1 0.17872 1 0.011233 1 0.044508 1 1.4301e-05 0.00664 1.1826e-05 0.00558 Amp Peak 6(1q42.3) 203 (41%) 289 0.022081 1 0.024264 1 1.7385e-07 9.13e-05 0.13185 1 0.63094 1 0.069634 1 0.032062 1 0.077535 1 0.00028196 0.114 0.026538 1 Amp Peak 7(2p23.2) 111 (23%) 381 0.46516 1 0.49706 1 5.0414e-28 4.56e-25 1.5941e-10 1e-07 0.0045067 1 0.55806 1 3.6271e-06 0.00176 5.0211e-06 0.00241 7.3449e-10 4.47e-07 1.5629e-12 1.09e-09 Amp Peak 8(2q13) 107 (22%) 385 0.069825 1 0.17977 1 2.7749e-33 2.56e-30 1.9547e-12 1.36e-09 0.002501 0.858 0.15262 1 8.4221e-11 5.42e-08 1.5344e-10 9.67e-08 8.8574e-17 6.97e-14 6.1648e-17 4.9e-14 Amp Peak 9(3p25.1) 70 (14%) 422 0.040292 1 0.21226 1 4.1064e-24 3.66e-21 3.7467e-06 0.00182 0.075002 1 0.43825 1 6.4919e-08 3.51e-05 1.7833e-08 9.95e-06 0.00014712 0.0618 5.9726e-07 0.000301 Amp Peak 10(3p14.1) 56 (11%) 436 0.86016 1 0.6235 1 7.5097e-20 6.38e-17 0.00080178 0.305 0.05214 1 0.37269 1 3.1763e-05 0.0143 2.5541e-05 0.0115 0.013969 1 7.3932e-05 0.0323 Amp Peak 11(3q26.2) 155 (32%) 337 5.2143e-06 0.00249 4.7384e-05 0.021 3.7675e-61 3.62e-58 1.951e-17 1.58e-14 0.00035272 0.141 0.01537 1 1.9131e-25 1.71e-22 3.6716e-25 3.28e-22 3.0393e-23 2.67e-20 1.9721e-24 1.76e-21 Amp Peak 12(3q26.2) 144 (29%) 348 2.4197e-05 0.0109 0.00016789 0.0703 8.9563e-60 8.59e-57 8.2463e-19 6.9e-16 0.0014996 0.54 0.024889 1 1.8859e-25 1.69e-22 7.5288e-26 6.78e-23 1.2452e-21 1.08e-18 1.3342e-23 1.18e-20 Amp Peak 13(4p16.3) 45 (9%) 447 0.0067724 1 0.013284 1 1.6378e-21 1.42e-18 0.00053205 0.209 0.08983 1 0.0028498 0.969 5.2038e-10 3.18e-07 6.9476e-11 4.49e-08 8.289e-09 4.73e-06 3.6687e-08 2.02e-05 Amp Peak 14(5p15.33) 77 (16%) 415 0.1124 1 0.15958 1 4.713e-32 4.33e-29 3.3993e-12 2.34e-09 0.22099 1 0.61178 1 3.2051e-14 2.37e-11 2.3731e-12 1.64e-09 5.8565e-14 4.29e-11 9.2857e-14 6.73e-11 Amp Peak 15(5q35.3) 48 (10%) 444 0.17647 1 0.054256 1 8.6719e-20 7.36e-17 0.00063895 0.245 0.23657 1 0.73096 1 3.1825e-07 0.000165 6.9809e-05 0.0306 1.4061e-08 7.93e-06 0.00056087 0.218 Amp Peak 16(6p24.2) 101 (21%) 391 0.00043028 0.171 0.0052384 1 1.3597e-39 1.27e-36 2.3523e-11 1.55e-08 0.00017678 0.0737 0.059021 1 6.9189e-16 5.35e-13 1.489e-14 1.12e-11 1.0909e-14 8.2e-12 1.8683e-15 1.43e-12 Amp Peak 17(6q25.1) 76 (15%) 416 0.5627 1 0.53897 1 7.5165e-22 6.53e-19 2.6388e-06 0.00129 0.31821 1 0.069774 1 4.9657e-07 0.000252 1.0325e-08 5.88e-06 1.5788e-05 0.00729 3.1959e-05 0.0143 Amp Peak 18(7q22.1) 82 (17%) 410 0.31101 1 0.55792 1 5.1197e-20 4.36e-17 0.0069369 1 0.73957 1 1 1 0.0036541 1 0.031739 1 0.0023231 0.806 0.0017652 0.621 Amp Peak 19(8p11.21) 146 (30%) 346 0.0016117 0.569 0.016106 1 1.704e-23 1.51e-20 0.01097 1 0.0011079 0.404 0.71861 1 0.00055334 0.216 2.2464e-05 0.0102 0.00029373 0.118 7.5672e-06 0.00361 Amp Peak 20(8q24.21) 188 (38%) 304 0.0023562 0.814 0.027971 1 1.5421e-35 1.43e-32 6.2036e-07 0.000312 8.7454e-05 0.0379 0.5036 1 3.3548e-09 1.96e-06 1.2609e-11 8.46e-09 1.1265e-09 6.84e-07 2.0127e-13 1.45e-10 Amp Peak 21(8q24.21) 196 (40%) 296 0.00043028 0.171 0.0052384 1 8.361e-35 7.76e-32 1.2352e-05 0.00577 7.2561e-07 0.000364 0.1407 1 1.816e-08 1.01e-05 1.7035e-11 1.13e-08 9.6474e-11 6.16e-08 1.0583e-12 7.43e-10 Amp Peak 22(9p24.2) 57 (12%) 435 0.083131 1 0.050289 1 2.8738e-22 2.51e-19 4.8659e-07 0.000247 0.00087402 0.33 0.0045676 1 2.9713e-09 1.74e-06 1.1686e-10 7.42e-08 2.6603e-10 1.65e-07 1.401e-07 7.37e-05 Amp Peak 23(9q34.3) 32 (7%) 460 0.20757 1 0.18508 1 3.7899e-12 2.6e-09 9.5638e-05 0.0411 0.33633 1 0.50659 1 2.1398e-05 0.00976 3.9787e-06 0.00193 2.023e-05 0.00929 1.302e-05 0.00607 Amp Peak 24(10q22.2) 132 (27%) 360 0.0069075 1 0.11554 1 1.768e-08 9.88e-06 0.38899 1 0.27288 1 0.41417 1 0.27587 1 0.014834 1 0.89147 1 0.1222 1 Amp Peak 25(11p11.2) 45 (9%) 447 0.0067724 1 0.0010266 0.38 1.3179e-16 1.03e-13 5.9694e-05 0.0263 0.012173 1 0.78884 1 2.3688e-05 0.0107 9.2756e-05 0.04 9.8624e-06 0.00466 1.2203e-06 0.000605 Amp Peak 26(11q13.2) 68 (14%) 424 0.00023538 0.097 0.0010132 0.379 5.9243e-22 5.16e-19 0.00020362 0.0843 0.014845 1 1 1 9.4399e-06 0.00447 5.5786e-08 3.02e-05 1.5315e-05 0.00709 6.8146e-05 0.0299 Amp Peak 27(12p12.1) 81 (16%) 411 0.5407 1 0.40713 1 5.1013e-15 3.88e-12 1.1254e-07 6e-05 0.53647 1 0.65949 1 4.1664e-05 0.0185 2.1104e-05 0.00964 8.9818e-08 4.8e-05 8.6396e-08 4.62e-05 Amp Peak 28(12q13.11) 79 (16%) 413 0.31962 1 0.34168 1 6.7385e-17 5.34e-14 3.6689e-08 2.02e-05 0.44874 1 0.15707 1 2.1913e-06 0.00107 1.9518e-06 0.00096 4.3089e-09 2.5e-06 1.1182e-08 6.35e-06 Amp Peak 29(12q13.2) 87 (18%) 405 0.15457 1 0.33457 1 1.7479e-17 1.42e-14 1.936e-07 0.000101 0.31522 1 0.35955 1 1.6584e-08 9.29e-06 6.5359e-08 3.52e-05 1.9552e-08 1.09e-05 4.6258e-09 2.68e-06 Amp Peak 30(13q34) 49 (10%) 443 0.17647 1 0.37121 1 4.1795e-20 3.57e-17 1.978e-06 0.000971 0.24136 1 0.054573 1 8.4129e-12 5.67e-09 1.371e-07 7.23e-05 4.8948e-09 2.82e-06 1.2074e-09 7.32e-07 Amp Peak 31(14q24.3) 56 (11%) 436 0.1124 1 0.04138 1 6.0411e-18 4.94e-15 1.6975e-05 0.00783 0.15303 1 0.39315 1 4.8483e-08 2.64e-05 1.143e-10 7.27e-08 8.3588e-09 4.76e-06 8.1606e-09 4.67e-06 Amp Peak 32(14q32.33) 70 (14%) 422 0.49133 1 0.40713 1 4.2615e-22 3.72e-19 1.0402e-06 0.000518 0.42633 1 0.78884 1 3.5377e-05 0.0158 4.7738e-08 2.61e-05 2.4148e-07 0.000125 1.5871e-08 8.9e-06 Amp Peak 33(16p11.2) 55 (11%) 437 0.019107 1 0.0040321 1 5.4911e-21 4.72e-18 3.2647e-05 0.0146 0.13819 1 0.12606 1 1.3063e-09 7.84e-07 1.7843e-09 1.06e-06 1.3265e-09 7.95e-07 7.905e-07 0.000395 Amp Peak 34(17q11.2) 63 (13%) 429 0.019107 1 0.043505 1 1.7221e-26 1.55e-23 2.1273e-11 1.41e-08 0.020056 1 0.0051992 1 1.2518e-10 7.94e-08 4.8066e-10 2.95e-07 8.6494e-15 6.55e-12 7.0478e-15 5.34e-12 Amp Peak 35(17q12) 64 (13%) 428 0.19333 1 0.064831 1 5.5629e-23 4.88e-20 1.4159e-12 9.91e-10 0.01114 1 0.43825 1 3.7667e-13 2.69e-10 2.7379e-10 1.69e-07 7.7889e-14 5.69e-11 3.1573e-16 2.46e-13 Amp Peak 36(17q25.1) 90 (18%) 402 0.00056551 0.219 0.0001089 0.0462 4.435e-41 4.16e-38 1.3618e-11 9.1e-09 0.0074143 1 0.19331 1 2.594e-12 1.79e-09 3.8791e-13 2.76e-10 3.7444e-13 2.67e-10 2.2832e-14 1.7e-11 Amp Peak 37(18p11.31) 81 (16%) 411 0.024354 1 0.12787 1 2.4327e-33 2.25e-30 5.5264e-12 3.75e-09 0.010116 1 0.019698 1 1.4489e-11 9.66e-09 1.9042e-13 1.37e-10 6.395e-18 5.22e-15 1.8606e-19 1.57e-16 Amp Peak 38(18q11.2) 62 (13%) 430 0.19333 1 0.064831 1 4.9411e-27 4.47e-24 3.1912e-10 1.97e-07 0.15594 1 0.044361 1 1.1718e-07 6.21e-05 4.5272e-08 2.48e-05 1.7271e-13 1.25e-10 8.4886e-12 5.71e-09 Amp Peak 39(19p13.2) 84 (17%) 408 0.00010196 0.0436 1.2101e-05 0.0057 2.9549e-46 2.78e-43 1.2207e-09 7.36e-07 0.15014 1 0.040754 1 1.0904e-18 9.09e-16 1.7572e-18 1.46e-15 8.3315e-18 6.8e-15 7.9603e-13 5.61e-10 Amp Peak 40(19p13.11) 83 (17%) 409 0.00023538 0.097 0.0010132 0.379 1.4706e-45 1.38e-42 5.9783e-12 4.05e-09 0.19889 1 0.30915 1 4.9951e-17 3.99e-14 5.3652e-18 4.4e-15 1.2998e-17 1.05e-14 5.0311e-16 3.91e-13 Amp Peak 41(19q12) 101 (21%) 391 0.00056551 0.219 0.0026059 0.891 9.0188e-49 8.52e-46 5.8528e-17 4.66e-14 0.0028922 0.98 0.21183 1 2.8673e-21 2.47e-18 2.6603e-20 2.28e-17 6.6333e-25 5.92e-22 1.2292e-22 1.08e-19 Amp Peak 42(20p13) 104 (21%) 388 0.019107 1 0.043505 1 1.633e-33 1.51e-30 1.8e-09 1.07e-06 0.082774 1 0.38642 1 3.7354e-11 2.45e-08 6.8957e-11 4.46e-08 1.835e-11 1.22e-08 3.9428e-12 2.7e-09 Amp Peak 43(20q11.21) 130 (26%) 362 0.0004961 0.195 0.00086078 0.325 6.6454e-49 6.3e-46 5.0074e-12 3.41e-09 0.0015609 0.553 0.20498 1 5.7106e-16 4.43e-13 1.0174e-14 7.66e-12 2.0764e-17 1.68e-14 5.66e-20 4.82e-17 Amp Peak 44(20q13.12) 136 (28%) 356 0.022668 1 0.0037915 1 2.7066e-49 2.57e-46 1.8125e-13 1.3e-10 0.0047763 1 0.10504 1 3.3198e-15 2.54e-12 5.0276e-15 3.83e-12 2.0629e-17 1.67e-14 8.816e-17 6.95e-14 Amp Peak 45(20q13.33) 134 (27%) 358 0.0053802 1 0.010787 1 1.5369e-46 1.45e-43 1.4256e-10 9e-08 0.067351 1 0.68647 1 5.6988e-13 4.04e-10 8.499e-14 6.2e-11 2.7986e-16 2.18e-13 2.4506e-14 1.82e-11 Amp Peak 46(22q12.2) 54 (11%) 438 0.059073 1 0.1325 1 2.3064e-18 1.9e-15 1.8818e-14 1.4e-11 0.18121 1 0.054573 1 6.3467e-13 4.49e-10 8.4225e-11 5.42e-08 2.1184e-18 1.75e-15 5.4669e-18 4.48e-15 Amp Peak 47(Xp11.23) 84 (17%) 408 0.49133 1 0.40713 1 1.8824e-25 1.69e-22 0.0084691 1 0.78261 1 0.39918 1 0.15507 1 0.13427 1 0.002354 0.814 0.0046788 1 Amp Peak 48(Xq28) 85 (17%) 407 0.069825 1 0.17977 1 4.9773e-24 4.42e-21 0.026931 1 0.12821 1 0.53502 1 0.11822 1 0.20182 1 0.0070188 1 0.011415 1 Del Peak 1(1p36.21) 65 (13%) 427 0.0053802 1 0.010787 1 1.7923e-23 1.58e-20 3.6735e-07 0.000189 0.0051829 1 0.26661 1 1.5522e-11 1.03e-08 7.3273e-09 4.21e-06 2.7186e-08 1.5e-05 4.3097e-09 2.5e-06 Del Peak 2(1p36.11) 78 (16%) 414 0.07289 1 0.013284 1 9.9071e-33 9.11e-30 6.9806e-11 4.5e-08 0.033892 1 0.39315 1 1.9554e-12 1.36e-09 3.1837e-11 2.09e-08 9.4361e-15 7.13e-12 2.4746e-12 1.71e-09 Del Peak 3(1q43) 9 (2%) 483 NA NA NA NA 0.0013121 0.475 0.17373 1 NA NA 0.37629 1 0.0048582 1 0.04309 1 0.12094 1 0.12155 1 Del Peak 4(2p25.3) 24 (5%) 468 NA NA NA NA 6.4768e-09 3.72e-06 0.00054017 0.211 0.26815 1 0.65189 1 8.8017e-05 0.038 0.00032265 0.129 0.00057758 0.222 0.0034957 1 Del Peak 5(2q22.1) 44 (9%) 448 0.019107 1 0.0040321 1 2.6951e-20 2.31e-17 0.0001795 0.0747 0.090743 1 0.083143 1 1.5487e-08 8.7e-06 7.7704e-08 4.16e-05 1.2399e-06 0.000614 0.0002325 0.096 Del Peak 6(2q37.3) 49 (10%) 443 NA NA NA NA 7.9381e-17 6.26e-14 4.5605e-05 0.0202 0.27613 1 0.50659 1 1.3597e-05 0.00632 1.4263e-06 0.000705 5.3895e-05 0.0238 0.0010095 0.379 Del Peak 7(3p14.2) 69 (14%) 423 0.0067724 1 0.013284 1 5.9092e-31 5.41e-28 1.2159e-09 7.36e-07 0.0009521 0.358 0.019698 1 3.7697e-15 2.88e-12 1.7993e-14 1.34e-11 4.3484e-13 3.09e-10 1.0849e-09 6.6e-07 Del Peak 8(3q13.31) 28 (6%) 464 0.059073 1 0.1325 1 1.4361e-12 1e-09 0.0046084 1 0.055855 1 1 1 0.00024561 0.1 0.00074372 0.284 5.7112e-07 0.000288 0.001183 0.431 Del Peak 9(4p16.3) 87 (18%) 405 0.022668 1 0.0037915 1 1.4148e-30 1.29e-27 1.7428e-12 1.21e-09 0.0096032 1 0.24436 1 1.572e-10 9.87e-08 9.1296e-11 5.85e-08 4.5147e-17 3.61e-14 6.6562e-12 4.51e-09 Del Peak 10(4p15.31) 90 (18%) 402 0.022668 1 0.0037915 1 4.1512e-35 3.86e-32 9.1271e-14 6.63e-11 0.020296 1 0.34594 1 3.8075e-11 2.49e-08 4.3602e-11 2.84e-08 9.2477e-19 7.72e-16 3.31e-12 2.28e-09 Del Peak 11(4q22.1) 99 (20%) 393 0.0053802 1 0.0010132 0.379 1.0387e-46 9.79e-44 2.0505e-18 1.7e-15 0.025224 1 0.10245 1 1.1035e-16 8.66e-14 1.1646e-18 9.7e-16 1.7439e-23 1.54e-20 4.2051e-20 3.59e-17 Del Peak 12(4q34.3) 115 (23%) 377 0.0053802 1 0.0010132 0.379 1.432e-51 1.36e-48 2.7015e-15 2.07e-12 0.059884 1 0.52141 1 1.3131e-18 1.09e-15 8.8314e-20 7.49e-17 1.7049e-21 1.47e-18 3.6118e-19 3.04e-16 Del Peak 13(5q11.2) 100 (20%) 392 0.022668 1 0.0037915 1 8.5477e-49 8.09e-46 1.1846e-16 9.29e-14 0.0008582 0.325 0.010013 1 7.3873e-17 5.84e-14 3.2404e-17 2.61e-14 9.5646e-18 7.79e-15 6.92e-17 5.48e-14 Del Peak 14(6q26) 44 (9%) 448 0.35228 1 0.1325 1 9.6266e-15 7.27e-12 5.188e-08 2.82e-05 0.67471 1 0.30068 1 2.293e-06 0.00112 7.7468e-05 0.0338 2.3904e-09 1.41e-06 4.18e-07 0.000214 Del Peak 15(7p22.3) 68 (14%) 424 0.0015041 0.54 0.0002482 0.101 4.17e-31 3.82e-28 2.4263e-10 1.51e-07 0.031221 1 0.093484 1 5.1223e-14 3.76e-11 4.0687e-15 3.1e-12 5.6019e-14 4.11e-11 4.4994e-11 2.92e-08 Del Peak 16(7q11.22) 39 (8%) 453 NA NA NA NA 3.2422e-21 2.79e-18 2.3477e-07 0.000122 0.066834 1 0.0066896 1 4.8924e-09 2.82e-06 1.4972e-09 8.92e-07 4.5985e-06 0.00221 0.00030178 0.121 Del Peak 17(7q31.1) 48 (10%) 444 0.17647 1 0.054256 1 5.7517e-27 5.19e-24 2.4116e-09 1.42e-06 0.089909 1 0.019249 1 3.2575e-14 2.41e-11 3.175e-13 2.27e-10 2.2684e-10 1.41e-07 1.5102e-08 8.5e-06 Del Peak 18(7q36.3) 57 (12%) 435 0.088223 1 0.25736 1 9.3545e-30 8.53e-27 1.755e-10 1.1e-07 0.018744 1 0.00065522 0.251 1.294e-18 1.08e-15 5.9341e-16 4.6e-13 7.638e-13 5.4e-10 2.4527e-10 1.52e-07 Del Peak 19(8p23.2) 103 (21%) 389 0.0067724 1 0.0010266 0.38 1.0317e-40 9.66e-38 1.2411e-21 1.07e-18 0.046885 1 0.37819 1 6.4461e-17 5.12e-14 5.0468e-19 4.24e-16 2.6572e-26 2.39e-23 6.075e-24 5.39e-21 Del Peak 20(9p23) 65 (13%) 427 0.35228 1 0.1325 1 1.0142e-22 8.89e-20 1.8406e-06 0.000907 0.036853 1 0.2947 1 1.9334e-07 0.000101 1.2894e-09 7.75e-07 7.5357e-08 4.05e-05 7.0882e-08 3.81e-05 Del Peak 21(9q34.11) 122 (25%) 370 0.00010196 0.0436 1.2101e-05 0.0057 5.0413e-52 4.79e-49 1.9365e-11 1.28e-08 0.00038441 0.153 0.031585 1 1.1334e-17 9.2e-15 4.835e-24 4.3e-21 9.241e-17 7.26e-14 1.3675e-12 9.59e-10 Del Peak 22(10q23.31) 70 (14%) 422 0.17647 1 0.054256 1 1.1991e-29 1.09e-26 5.1852e-08 2.82e-05 0.1162 1 0.79627 1 3.3892e-07 0.000175 1.8839e-07 9.85e-05 3.6345e-10 2.23e-07 1.2089e-07 6.4e-05 Del Peak 23(11p15.5) 93 (19%) 399 0.35228 1 0.1325 1 7.8093e-40 7.3e-37 3.9073e-17 3.13e-14 0.45232 1 0.30915 1 4.9233e-14 3.63e-11 4.7703e-16 3.71e-13 5.8413e-17 4.66e-14 6.3081e-15 4.79e-12 Del Peak 24(11q14.1) 63 (13%) 429 NA NA NA NA 7.3612e-22 6.4e-19 1.3934e-09 8.33e-07 0.32849 1 0.39315 1 2.821e-08 1.56e-05 2.3106e-10 1.44e-07 3.2976e-10 2.03e-07 7.8052e-13 5.51e-10 Del Peak 25(11q25) 84 (17%) 408 NA NA NA NA 4.7504e-28 4.3e-25 1.4133e-13 1.02e-10 0.13356 1 0.80376 1 3.3098e-08 1.82e-05 5.4312e-12 3.69e-09 5.3226e-14 3.91e-11 7.4373e-16 5.74e-13 Del Peak 26(12q23.1) 48 (10%) 444 NA NA NA NA 2.4139e-20 2.07e-17 8.8224e-11 5.66e-08 0.034937 1 0.0094929 1 3.9727e-07 0.000204 1.1254e-07 6e-05 1.5509e-10 9.75e-08 3.333e-09 1.95e-06 Del Peak 27(12q24.33) 59 (12%) 433 NA NA NA NA 1.0345e-25 9.3e-23 2.3165e-11 1.53e-08 0.035487 1 0.10551 1 1.065e-11 7.16e-09 2.3191e-09 1.37e-06 8.9914e-14 6.54e-11 4.5063e-11 2.92e-08 Del Peak 28(13q11) 86 (17%) 406 0.45544 1 0.013284 1 1.9362e-29 1.76e-26 3.9651e-09 2.31e-06 0.16208 1 0.12606 1 4.7824e-07 0.000243 1.6999e-11 1.13e-08 1.6617e-10 1.04e-07 7.2093e-10 4.4e-07 Del Peak 29(13q14.2) 94 (19%) 398 0.68692 1 0.043505 1 2.4301e-32 2.23e-29 5.1626e-08 2.81e-05 0.074627 1 0.10245 1 1.164e-06 0.000579 9.5652e-11 6.12e-08 2.513e-08 1.39e-05 3.9643e-07 0.000204 Del Peak 30(14q13.1) 62 (13%) 430 0.019107 1 0.0040321 1 1.2798e-22 1.12e-19 1.2742e-10 8.07e-08 0.068123 1 0.10551 1 7.6799e-09 4.4e-06 1.6315e-10 1.02e-07 1.2074e-08 6.83e-06 1.0628e-10 6.78e-08 Del Peak 31(15q15.1) 124 (25%) 368 0.022668 1 0.0037915 1 1.368e-55 1.31e-52 1.4126e-18 1.17e-15 0.0024678 0.849 0.20498 1 3.7644e-17 3.02e-14 8.6372e-22 7.5e-19 5.5443e-23 4.87e-20 2.0984e-18 1.73e-15 Del Peak 32(15q23) 100 (20%) 392 0.0067724 1 0.0010266 0.38 7.2794e-42 6.83e-39 1.9402e-18 1.61e-15 0.10417 1 0.81196 1 1.4606e-12 1.02e-09 9.6977e-15 7.31e-12 2.082e-16 1.63e-13 1.3522e-15 1.04e-12 Del Peak 33(16p13.3) 81 (16%) 411 0.0015041 0.54 0.0037915 1 1.5908e-37 1.48e-34 1.5271e-14 1.14e-11 0.054723 1 0.176 1 8.4937e-14 6.2e-11 1.2823e-11 8.59e-09 2.159e-15 1.66e-12 1.1878e-16 9.3e-14 Del Peak 34(16q21) 140 (28%) 352 0.0019706 0.69 0.00045077 0.179 1.0496e-56 1e-53 2.9492e-18 2.42e-15 0.079675 1 1 1 9.3975e-18 7.66e-15 6.6315e-16 5.13e-13 4.3806e-19 3.68e-16 8.48e-19 7.09e-16 Del Peak 35(16q23.1) 150 (30%) 342 0.0094157 1 0.00016789 0.0703 2.3364e-57 2.24e-54 2.4342e-17 1.96e-14 0.027519 1 0.36858 1 7.0748e-19 5.94e-16 1.8331e-14 1.37e-11 1.5217e-19 1.29e-16 3.1885e-22 2.78e-19 Del Peak 36(17p13.3) 106 (22%) 386 0.0019706 0.69 0.00045077 0.179 7.2909e-49 6.9e-46 2.5949e-11 1.71e-08 0.00082404 0.313 0.66522 1 7.1236e-17 5.63e-14 1.5847e-19 1.34e-16 2.2507e-14 1.67e-11 4.4116e-11 2.87e-08 Del Peak 37(17p12) 121 (25%) 371 0.00056551 0.219 0.0001089 0.0462 2.5724e-58 2.46e-55 8.7462e-16 6.74e-13 0.0012538 0.455 0.68094 1 2.6358e-25 2.36e-22 5.6455e-29 5.13e-26 2.2557e-21 1.94e-18 3.1439e-17 2.53e-14 Del Peak 38(17p11.2) 106 (22%) 386 0.00023538 0.097 5.6631e-05 0.025 3.6653e-52 3.49e-49 8.8228e-14 6.42e-11 0.024749 1 0.37819 1 1.2817e-19 1.08e-16 5.1934e-24 4.61e-21 3.611e-18 2.96e-15 8.9639e-13 6.31e-10 Del Peak 39(17q11.2) 96 (20%) 396 0.0015041 0.54 0.0002482 0.101 6.2617e-44 5.88e-41 1.1348e-07 6.03e-05 0.01298 1 0.64741 1 2.4659e-14 1.83e-11 4.5089e-17 3.61e-14 1.1029e-10 7.03e-08 1.8123e-07 9.5e-05 Del Peak 40(17q21.2) 101 (21%) 391 0.00010196 0.0436 1.2101e-05 0.0057 2.0265e-48 1.91e-45 1.4053e-09 8.39e-07 0.0032681 1 0.16823 1 1.3771e-14 1.03e-11 7.991e-19 6.7e-16 1.2567e-13 9.1e-11 4.1759e-09 2.43e-06 Del Peak 41(18q23) 91 (18%) 401 0.19333 1 0.50369 1 6.4483e-34 5.96e-31 4.6374e-12 3.16e-09 0.0427 1 0.035374 1 4.876e-11 3.16e-08 2.7243e-13 1.95e-10 3.6062e-12 2.47e-09 4.3983e-12 3e-09 Del Peak 42(19p13.3) 141 (29%) 351 5.6414e-07 0.000285 4.2494e-06 0.00205 5.9979e-78 5.76e-75 7.234e-31 6.61e-28 8.9914e-06 0.00427 0.01464 1 4.0529e-36 3.77e-33 1.9552e-36 1.82e-33 1.1223e-34 1.04e-31 3.0062e-34 2.78e-31 Del Peak 43(19p12) 49 (10%) 443 NA NA NA NA 1.3048e-15 1e-12 6.6432e-07 0.000333 0.20985 1 0.50659 1 2.1398e-05 0.00976 3.9787e-06 0.00193 8.8216e-07 0.00044 8.3971e-05 0.0364 Del Peak 44(19q13.43) 60 (12%) 432 0.0019706 0.69 0.00045077 0.179 2.6973e-23 2.38e-20 2.5631e-09 1.51e-06 0.078188 1 0.56032 1 1.2805e-09 7.71e-07 2.4721e-09 1.46e-06 2.7615e-10 1.7e-07 4.0403e-11 2.64e-08 Del Peak 45(20p12.1) 30 (6%) 462 1 1 1 1 0.00018173 0.0754 0.079381 1 0.087709 1 0.50659 1 0.10144 1 0.0099624 1 0.039824 1 0.052845 1 Del Peak 46(22q11.1) 81 (16%) 411 0.0067724 1 0.0010266 0.38 2.2619e-29 2.06e-26 0.00011472 0.0484 0.45114 1 0.79627 1 1.2489e-07 6.59e-05 1.8457e-09 1.09e-06 3.0442e-07 0.000158 0.00013518 0.0569 Del Peak 47(22q12.1) 87 (18%) 405 0.0067724 1 0.0010266 0.38 1.5397e-31 1.41e-28 2.0993e-05 0.00961 0.26742 1 0.62715 1 4.7917e-09 2.77e-06 1.3056e-11 8.73e-09 4.7415e-08 2.59e-05 7.6401e-06 0.00364 Del Peak 48(22q13.31) 122 (25%) 370 1.7966e-05 0.00826 2.3981e-06 0.00117 9.6133e-55 9.17e-52 4.7889e-13 3.4e-10 0.0018007 0.632 0.15262 1 8.8782e-20 7.52e-17 1.4412e-23 1.28e-20 1.0953e-17 8.9e-15 1.5611e-14 1.17e-11 Del Peak 49(22q13.32) 128 (26%) 364 0.00010196 0.0436 1.2101e-05 0.0057 4.9267e-53 4.7e-50 2.0407e-12 1.41e-09 0.0014789 0.534 0.07864 1 2.9297e-18 2.41e-15 1.2062e-21 1.05e-18 4.4427e-17 3.56e-14 3.7999e-14 2.8e-11 Del Peak 50(Xp21.1) 81 (16%) 411 0.0015041 0.54 0.0002482 0.101 4.2324e-33 3.9e-30 3.8546e-09 2.25e-06 0.00541 1 0.24436 1 1.337e-10 8.45e-08 3.094e-11 2.03e-08 3.2035e-12 2.21e-09 4.8114e-10 2.95e-07