
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Cnvs_onlysig.49.4134/CNV2ClinicalAnalysis_nozzle_onlysig_focal.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Cnvs_onlysig.49.4134/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/410781/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/BLCA-TP/3132613/1.GDAC_clinicalDataPicker.Finished/BLCA-TP.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=BLCA-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=BLCA-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=135, in cluster file=150, common to both=131
[1]  62 131
[1] "Amp Peak  1(1p34.2)"
[1] 3
      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                           41                            90 
      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                           41                            90 
[1] "Amp Peak  2(1p22.3)"
[1] 3
      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                           39                            92 
      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                           39                            92 
[1] "Amp Peak  3(1q21.3)"
[1] 3
      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                           68                            63 
      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                           68                            63 
[1] "Amp Peak  4(1q23.3)"
[1] 3
      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                           72                            59 
      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                           72                            59 
[1] "Amp Peak  5(3p25.2)"
[1] 3
      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                           63                            68 
      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                           63                            68 
[1] "Amp Peak  6(3q26.32)"
[1] 3
      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                            75                             56 
      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                            75                             56 
[1] "Amp Peak  7(4p16.3)"
[1] 3
      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                           27                           104 
      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                           27                           104 
[1] "Amp Peak  8(4q13.3)"
[1] 3
      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                           17                           114 
      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                           17                           114 
[1] "Amp Peak  9(5p15.1)"
[1] 3
      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                           64                            67 
      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                           64                            67 
[1] "Amp Peak 10(6p22.3)"
[1] 3
      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                           55                            76 
      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                           55                            76 
[1] "Amp Peak 11(6q12)"
[1] 3
      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                         22                         109 
      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                         22                         109 
[1] "Amp Peak 12(6q21)"
[1] 3
      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                         15                         116 
      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                         15                         116 
[1] "Amp Peak 13(7p11.2)"
[1] 3
      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                           70                            61 
      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                           70                            61 
[1] "Amp Peak 14(8p11.23)"
[1] 3
      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                            45                             86 
      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                            45                             86 
[1] "Amp Peak 15(8p11.21)"
[1] 3
      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                            45                             86 
      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                            45                             86 
[1] "Amp Peak 16(8q22.3)"
[1] 3
      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                           82                            49 
      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                           82                            49 
[1] "Amp Peak 17(8q24.21)"
[1] 3
      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                            80                             51 
      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                            80                             51 
[1] "Amp Peak 18(10p15.1)"
[1] 3
      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                            56                             75 
      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                            56                             75 
[1] "Amp Peak 19(11q13.3)"
[1] 3
      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                            51                             80 
      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                            51                             80 
[1] "Amp Peak 20(12q15)"
[1] 3
      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                          44                           87 
      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                          44                           87 
[1] "Amp Peak 21(13q34)"
[1] 3
      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                          49                           82 
      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                          49                           82 
[1] "Amp Peak 22(16p12.1)"
[1] 3
      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                            35                             96 
      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                            35                             96 
[1] "Amp Peak 23(17q11.2)"
[1] 3
      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                            62                             69 
      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                            62                             69 
[1] "Amp Peak 24(17q12)"
[1] 3
      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                          56                           75 
      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                          56                           75 
[1] "Amp Peak 25(19q12)"
[1] 3
      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                          58                           73 
      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                          58                           73 
[1] "Amp Peak 26(19q13.43)"
[1] 3
      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                             56                              75 
      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                             56                              75 
[1] "Amp Peak 27(20q11.21)"
[1] 3
      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                             92                              39 
      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                             92                              39 
[1] "Amp Peak 28(22q11.23)"
[1] 3
      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                             32                              99 
      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                             32                              99 
[1] "Del Peak  1(1p36.11)"
[1] 3
      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                            23                            108 
      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                            23                            108 
[1] "Del Peak  2(1q32.1)"
[1] 3
      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                           25                           106 
      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                           25                           106 
[1] "Del Peak  3(2q22.1)"
[1] 3
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                           40                            91 
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                           40                            91 
[1] "Del Peak  4(2q34)"
[1] 3
      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                         55                          76 
      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                         55                          76 
[1] "Del Peak  5(2q37.1)"
[1] 3
      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                           67                            64 
      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                           67                            64 
[1] "Del Peak  6(3p21.31)"
[1] 3
      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                            42                             89 
      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                            42                             89 
[1] "Del Peak  7(3p14.2)"
[1] 3
      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                           43                            88 
      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                           43                            88 
[1] "Del Peak  8(3p12.3)"
[1] 3
      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                           37                            94 
      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                           37                            94 
[1] "Del Peak  9(4q22.1)"
[1] 3
      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                           52                            79 
      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                           52                            79 
[1] "Del Peak 10(4q34.2)"
[1] 3
      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                           59                            72 
      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                           59                            72 
[1] "Del Peak 11(5q11.2)"
[1] 3
      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                           68                            63 
      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                           68                            63 
[1] "Del Peak 12(5q35.1)"
[1] 3
      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                           66                            65 
      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                           66                            65 
[1] "Del Peak 13(6p25.3)"
[1] 3
      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                           36                            95 
      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                           36                            95 
[1] "Del Peak 14(6q21)"
[1] 3
      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                         55                          76 
      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                         55                          76 
[1] "Del Peak 15(8p23.1)"
[1] 3
      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                           74                            57 
      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                           74                            57 
[1] "Del Peak 16(9p23)"
[1] 3
      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                         58                          73 
      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                         58                          73 
[1] "Del Peak 17(9p21.3)"
[1] 3
      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                           76                            55 
      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                           76                            55 
[1] "Del Peak 18(10p12.1)"
[1] 3
      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                            27                            104 
      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                            27                            104 
[1] "Del Peak 19(10q23.31)"
[1] 3
      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                             57                              74 
      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                             57                              74 
[1] "Del Peak 20(11p15.5)"
[1] 3
      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                            66                             65 
      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                            66                             65 
[1] "Del Peak 21(11q25)"
[1] 3
      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                          42                           89 
      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                          42                           89 
[1] "Del Peak 22(13q14.2)"
[1] 3
      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                            51                             80 
      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                            51                             80 
[1] "Del Peak 23(14q12)"
[1] 3
      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                          37                           94 
      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                          37                           94 
[1] "Del Peak 24(14q32.31)"
[1] 3
      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                             38                              93 
      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                             38                              93 
[1] "Del Peak 25(15q13.1)"
[1] 3
      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                            49                             82 
      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                            49                             82 
[1] "Del Peak 26(16p13.3)"
[1] 3
      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                            48                             83 
      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                            48                             83 
[1] "Del Peak 27(16q23.1)"
[1] 3
      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                            37                             94 
      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                            37                             94 
[1] "Del Peak 28(17p12)"
[1] 3
      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                          68                           63 
      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                          68                           63 
[1] "Del Peak 29(18q23)"
[1] 3
      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                          57                           74 
      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                          57                           74 
[1] "Del Peak 30(19p13.3)"
[1] 3
      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                            51                             80 
      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                            51                             80 
[1] "Del Peak 31(22q13.32)"
[1] 3
      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                             53                              78 
      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                             53                              78 
[1] "Del Peak 32(Xp11.3)"
[1] 3
      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                           37                            94 
      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                           37                            94 
[1] "Del Peak 33(Xq21.33)"
[1] 3
      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                            31                            100 
      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                            31                            100 
[1] "Del Peak 34(Xq23)"
[1] 3
      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                         30                         101 
      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                         30                         101 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "VITALSTATUS"                           
 [5] "DCCUPLOADDATE"                         
 [6] "PRIMARYSITEOFDESEASE"                  
 [7] "GENDER"                                
 [8] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
 [9] "DAYSTOLASTKNOWNALIVE"                  
[10] "RADIATIONTHERAPY"                      
[11] "KARNOFSKYPERFORMANCESCORE"             
[12] "RADIATIONS.RADIATION.REGIMENINDICATION"
[13] "NUMBERPACKYEARSSMOKED"                 
[14] "TOBACCOSMOKINGHISTORYINDICATOR"        
[15] "DISTANT.METASTASIS"                    
[16] "LYMPH.NODE.METASTASIS"                 
[17] "NUMBER.OF.LYMPH.NODES"                 
[18] "TUMOR.STAGECODE"                       
[19] "NEOPLASM.DISEASESTAGE"                 
[20] "BATCHNUMBER"                           

Input Data has 20 rows and 131 columns.

[1] "Batch" "20"   
[1] "Last Follow UP"
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
         389           NA           NA           NA           NA          363 
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
          NA           NA           NA           NA           NA           NA 
TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA 
          NA           NA           NA           NA           NA          179 
TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR 
         111           NA           NA           59           61           14 
TCGA-CF-A1HS TCGA-CF-A27C TCGA-CF-A3MF TCGA-CF-A3MG TCGA-CF-A3MH TCGA-CF-A3MI 
          13           21           NA           NA           NA           NA 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL 
          NA           NA          219          166          158          246 
TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB 
          77           NA          955          273          214          271 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX 
        3616         3056          218          178          202           55 
TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL 
         322           NA         3767         2291           67          121 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
         238           NA          319         1151          168          350 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3X6 
          NA          252           NA         3989         1108           NA 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 
           3          268          253           NA          209           NA 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL 
         336          272          242          974           NA          334 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR 
         186          207           NA          138           NA           NA 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE 
          59          240          208          461          124           71 
TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES 
        1518          806          172           NA          997          525 
TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO 
         214           NA           25           87           68           40 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 
         137           42           31           76           33          234 
TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R 
          64           95          177          194          230           98 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QG 
         133          195          187          173          232           NA 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO 
         237          125          202          194          162           46 
TCGA-H4-A2HQ TCGA-HQ-A2OE TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
         204           NA          265          104          141 
Variable 1:'AGE':	nDistinctValues=43,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=31,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=89,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=13,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 10:'RADIATION.THERAPY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'KARNOFSKY.PERFORMANCE.SCORE':	nDistinctValues=7,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 12:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 13:'NUMBERPACKYEARSSMOKED':	nDistinctValues=35,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 14:'TOBACCOSMOKINGHISTORYINDICATOR':	nDistinctValues=5,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 15:'DISTANT.METASTASIS':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 16:'LYMPH.NODE.METASTASIS':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 17:'NUMBER.OF.LYMPH.NODES':	nDistinctValues=13,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 18:'TUMOR.STAGECODE':	nDistinctValues=8,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 19:'NEOPLASM.DISEASESTAGE':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 20:'BATCH.NUMBER':	nDistinctValues=14,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
 [1] "AGE"                            "GENDER"                        
 [3] "KARNOFSKY.PERFORMANCE.SCORE"    "NUMBERPACKYEARSSMOKED"         
 [5] "TOBACCOSMOKINGHISTORYINDICATOR" "DISTANT.METASTASIS"            
 [7] "LYMPH.NODE.METASTASIS"          "NUMBER.OF.LYMPH.NODES"         
 [9] "TUMOR.STAGECODE"                "NEOPLASM.DISEASESTAGE"         
[1] "TUMOR.?STAGE" "9"           
[1] "stage2"
vv
 T2 T2A T2B  T3 T3A T3B  T4 T4A 
  5   3  14  12  12  11   1  13 
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 131 columns, 1 survival variables, and 10 non-survival variables.
AGE, nv=43, binary=FALSE, numeric=TRUE
GENDER, nv=2, binary=FALSE, numeric=FALSE
KARNOFSKY.PERFORMANCE.SCORE, nv=7, binary=FALSE, numeric=TRUE
NUMBERPACKYEARSSMOKED, nv=35, binary=FALSE, numeric=TRUE
TOBACCOSMOKINGHISTORYINDICATOR, nv=5, binary=FALSE, numeric=TRUE
DISTANT.METASTASIS, nv=3, binary=FALSE, numeric=FALSE
LYMPH.NODE.METASTASIS, nv=5, binary=FALSE, numeric=FALSE
NUMBER.OF.LYMPH.NODES, nv=13, binary=FALSE, numeric=TRUE
TUMOR.STAGECODE, nv=0, binary=FALSE, numeric=TRUE
NEOPLASM.DISEASESTAGE, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1p34.2)
D1V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  1(1P34.2) CNV       29 11
  AMP PEAK  1(1P34.2) WILD-TYPE 63 21
      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                           40                            84 
      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                           11                            21 
$`AMP PEAK  1(1P34.2) CNV`
TCGA-BT-A20J TCGA-BT-A20R TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 
       19.00         5.06         5.88         3.65         8.98         1.94 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A1AB 
        0.43        12.92         5.19         2.53         8.98         8.91 
TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IT 
       10.59       123.85         3.98         7.82         8.22         5.52 
TCGA-DK-A3IU TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL 
       11.51         8.94         4.01        32.02        24.30        10.98 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EL 
       19.79         1.94         7.89        15.16         4.08        26.93 
TCGA-G2-A3IE TCGA-GC-A3OO TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OS 
       20.12         1.32         1.02         1.08         7.69         5.82 
TCGA-GU-A42P TCGA-GV-A3JW TCGA-GV-A40G TCGA-K4-A3WV 
        6.38         6.41         5.33         4.64 

$`AMP PEAK  1(1P34.2) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U 
       26.10        12.16        17.85        19.46        14.89         8.61 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR 
        5.06         8.35         8.25         4.64         2.01         0.46 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A5 
        0.69         4.90         7.20         5.46         8.09         2.14 
TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF 
       31.40         7.04       118.88       100.47         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IQ 
        6.64         1.81         7.76        75.32         2.20        10.49 
TCGA-DK-A3IS TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC 
       37.84         9.67         8.28        10.55       131.15        36.43 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 
        0.10         8.81         8.32         6.87        11.05         8.94 
TCGA-FD-A3N6 TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ 
        7.96         6.12         6.81         5.49         4.54        46.78 
TCGA-FD-A43U TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO 
        6.84         2.33        49.91        26.50         5.65        32.78 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB 
       17.26         7.04         0.82         2.86         2.24         4.50 
TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R 
        1.38         2.50         2.10         3.12         7.56         3.22 
TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI 
        4.37         6.15         5.69         7.63         7.79         4.11 
TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        6.64         6.38         1.51         6.71         8.71         3.42 

      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                         0.43                          0.10 
      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                        7.050                         6.955 
[1] "0.4 - 123.8 (7.1)" "0.1 - 131.2 (7.0)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
[1] "hr=" "1.1"
D1V2, continuous
D1V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  1(1P34.2) CNV         12   29
  AMP PEAK  1(1P34.2) WILD-TYPE   21   69
        clus
vv       AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE
  FEMALE                      12                            21
  MALE                        29                            69
D1V4, continuous
D1V5, continuous
D1V6, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  1(1P34.2) CNV       12  1 15
  AMP PEAK  1(1P34.2) WILD-TYPE 22  1 29
D1V7, multiclass
    clus
vv   AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE
  M0                      12                            22
  M1                       1                             1
  MX                      15                            29
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  1(1P34.2) CNV       13  5  6  1  3
  AMP PEAK  1(1P34.2) WILD-TYPE 32  4  8  2  5
D1V8, multiclass
D1V9, continuous
D1V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  AMP PEAK  1(1P34.2) CNV              8         8       11
  AMP PEAK  1(1P34.2) WILD-TYPE       18        19       15
D1V11, multiclass
           clus
vv          AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE
  STAGE II                        8                            18
  STAGE III                       8                            19
  STAGE IV                       11                            15

Clustering(2) Variable = Amp Peak  2(1p22.3)
D2V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  2(1P22.3) CNV       27 11
  AMP PEAK  2(1P22.3) WILD-TYPE 65 21
      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                           38                            86 
      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                           11                            21 
$`AMP PEAK  2(1P22.3) CNV`
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A2LA TCGA-C4-A0F0 TCGA-CF-A1HS 
       19.00        26.10         5.06         5.88         1.94         0.43 
TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A2HX TCGA-DK-A2I2 
       12.92         5.19         2.14        31.40         1.81         7.76 
TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IU TCGA-FD-A3B7 
      123.85         3.98         7.82         8.22        11.51         4.01 
TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N 
       24.30        10.98         4.54        19.79         1.94         7.89 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A3IE TCGA-GC-A3OO TCGA-GC-A3YS 
       15.16         4.08         2.33        20.12         1.32         1.08 
TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QF 
        2.10         5.82         6.38         4.37         6.41         7.63 
TCGA-GV-A40G TCGA-K4-A3WV 
        5.33         4.64 

$`AMP PEAK  2(1P22.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V 
       12.16        17.85        19.46        14.89         8.61         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F6 
        8.35         8.25         3.65         4.64         8.98         2.01 
TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL 
        0.46         0.69         4.90         7.20         5.46         8.09 
TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD 
        2.53         8.98         7.04         8.91       118.88       100.47 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A2I6 TCGA-DK-A3IK 
        7.17         5.85         6.64        10.59        75.32         2.20 
TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX 
       10.49        37.84         5.52         9.67         8.28        10.55 
TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 
      131.15        36.43         0.10         8.81         8.32         8.94 
TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SM 
        6.87        11.05         8.94         7.96        32.02         6.12 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A43U TCGA-G2-A2EF TCGA-G2-A2EJ 
        6.81         5.49        46.78         6.84        49.91        26.50 
TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY 
        5.65        26.93        32.78        17.26         7.04         0.82 
TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC 
        2.86         2.24         4.50         1.38         1.02         2.50 
TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JX TCGA-GV-A3JZ 
        7.69         3.12         7.56         3.22         6.15         5.69 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO TCGA-H4-A2HQ 
        7.79         4.11         6.64         6.38         1.51         6.71 
TCGA-K4-A3WS TCGA-K4-A3WU 
        8.71         3.42 

      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                         0.43                          0.10 
      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                        5.850                         7.185 
[1] "0.4 - 123.8 (5.8)" "0.1 - 131.2 (7.2)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
[1] "hr=" "1.4"
D2V2, continuous
D2V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  2(1P22.3) CNV          9   30
  AMP PEAK  2(1P22.3) WILD-TYPE   24   68
        clus
vv       AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE
  FEMALE                       9                            24
  MALE                        30                            68
D2V4, continuous
D2V5, continuous
D2V6, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  2(1P22.3) CNV        9  1 18
  AMP PEAK  2(1P22.3) WILD-TYPE 25  1 26
D2V7, multiclass
    clus
vv   AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE
  M0                       9                            25
  M1                       1                             1
  MX                      18                            26
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  2(1P22.3) CNV       12  4  8  1  3
  AMP PEAK  2(1P22.3) WILD-TYPE 33  5  6  2  5
D2V8, multiclass
D2V9, continuous
D2V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  AMP PEAK  2(1P22.3) CNV              7         8       12
  AMP PEAK  2(1P22.3) WILD-TYPE       19        19       14
D2V11, multiclass
           clus
vv          AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE
  STAGE II                        7                            19
  STAGE III                       8                            19
  STAGE IV                       12                            14

Clustering(3) Variable = Amp Peak  3(1q21.3)
D3V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  3(1Q21.3) CNV       47 17
  AMP PEAK  3(1Q21.3) WILD-TYPE 45 15
      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                           64                            60 
      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                           17                            15 
$`AMP PEAK  3(1Q21.3) CNV`
TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20T 
        2.66         6.74        19.00        26.10         5.06        14.89 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 
        5.06         8.35         5.88         3.65         8.98         1.94 
TCGA-CF-A1HS TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A7 
        0.43         5.46         5.19         2.53         2.14         8.98 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 
      118.88       100.47         1.81        10.59         7.76       123.85 
TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IT TCGA-DK-A3IU 
        2.20         3.98         7.82         8.22         5.52        11.51 
TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B7 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL 
       36.43         0.10         4.01        32.02        24.30        10.98 
TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 
        6.12         5.49        19.79         1.94         7.89        15.16 
TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2ES TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3OO 
        4.08         2.33        17.26        20.12         0.82         1.32 
TCGA-GC-A3RB TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OS 
        4.50         2.50         1.08         7.69         2.10         5.82 
TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF 
        6.38         4.37         6.41         6.15         5.69         7.63 
TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G TCGA-K4-A3WS 
        4.11         6.38         5.33         8.71 

$`AMP PEAK  3(1Q21.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P 
       12.79         7.33         6.58        11.93        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20X TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR 
       19.46         8.61         8.25         4.64         2.01         0.46 
TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3YL TCGA-DK-A1A6 
        0.69        12.92         4.90         7.20         8.09        31.40 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I6 
        7.04         8.91         7.17         5.85         6.64        75.32 
TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY 
       10.49        37.84         9.67         8.28        10.55       131.15 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 
        8.81         8.32         8.94         6.87        11.05         8.94 
TCGA-FD-A3N6 TCGA-FD-A3SN TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43U TCGA-G2-A2EF 
        7.96         6.81         4.54        46.78         6.84        49.91 
TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A3IB TCGA-GC-A3BM 
       26.50         5.65        26.93        32.78         7.04         2.86 
TCGA-GC-A3I6 TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R 
        2.24         1.38         1.02         3.12         7.56         3.22 
TCGA-GV-A3QH TCGA-GV-A3QK TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WU TCGA-K4-A3WV 
        7.79         6.64         1.51         6.71         3.42         4.64 

      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                         0.10                          0.46 
      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                        6.000                         7.675 
[1] "0.1 - 123.8 (6.0)" "0.5 - 131.2 (7.7)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
[1] "hr=" "1.3"
D3V2, continuous
D3V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  3(1Q21.3) CNV         16   52
  AMP PEAK  3(1Q21.3) WILD-TYPE   17   46
        clus
vv       AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE
  FEMALE                      16                            17
  MALE                        52                            46
D3V4, continuous
D3V5, continuous
D3V6, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  3(1Q21.3) CNV       18  2 26
  AMP PEAK  3(1Q21.3) WILD-TYPE 16  0 18
D3V7, multiclass
    clus
vv   AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE
  M0                      18                            16
  M1                       2                             0
  MX                      26                            18
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  3(1Q21.3) CNV       21  7 10  3  5
  AMP PEAK  3(1Q21.3) WILD-TYPE 24  2  4  0  3
D3V8, multiclass
D3V9, continuous
D3V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  AMP PEAK  3(1Q21.3) CNV             12        15       19
  AMP PEAK  3(1Q21.3) WILD-TYPE       14        12        7
D3V11, multiclass
           clus
vv          AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE
  STAGE II                       12                            14
  STAGE III                      15                            12
  STAGE IV                       19                             7

Clustering(4) Variable = Amp Peak  4(1q23.3)
D4V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  4(1Q23.3) CNV       52 16
  AMP PEAK  4(1Q23.3) WILD-TYPE 40 16
      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                           68                            56 
      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                           16                            16 
$`AMP PEAK  4(1Q23.3) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20T 
       12.79         2.66         6.74        19.00        26.10        14.89 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
        5.06         8.35         5.88         3.65         4.64         8.98 
TCGA-C4-A0F0 TCGA-CF-A1HS TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-DK-A1A3 TCGA-DK-A1A5 
        1.94         0.43         7.20         5.46         2.53         2.14 
TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 
        8.98       118.88       100.47        10.59         7.76       123.85 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IS 
       75.32         2.20         3.98         7.82         8.22        37.84 
TCGA-DK-A3IT TCGA-DK-A3IU TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B7 
        5.52        11.51        36.43         0.10         8.32         4.01 
TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP 
       32.02        24.30        10.98         6.12         5.49         4.54 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE 
       19.79         1.94         7.89        15.16         4.08         2.33 
TCGA-G2-A2EF TCGA-G2-A3VY TCGA-GC-A3OO TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 
       49.91         0.82         1.32         2.50         1.08         7.69 
TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX 
        2.10         5.82         6.38         4.37         6.41         6.15 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ 
        5.69         7.63         4.11         5.33         1.51         6.71 
TCGA-K4-A3WS TCGA-K4-A3WU 
        8.71         3.42 

$`AMP PEAK  4(1Q23.3) WILD-TYPE`
TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q 
        7.33         6.58        11.93        12.16        17.85        19.46 
TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20X TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C 
        5.06         8.61         8.25         2.01         0.46         0.69 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A6 TCGA-DK-A1AA 
       12.92         4.90         5.19         8.09        31.40         7.04 
TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A3IQ 
        8.91         7.17         5.85         6.64         1.81        10.49 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-FD-A3B3 TCGA-FD-A3B5 
        9.67         8.28        10.55       131.15         8.81         8.94 
TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SN TCGA-FD-A3SQ 
        6.87        11.05         8.94         7.96         6.81        46.78 
TCGA-FD-A43U TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES 
        6.84        26.50         5.65        26.93        32.78        17.26 
TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3RC 
        7.04        20.12         2.86         2.24         4.50         1.38 
TCGA-GC-A3RD TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3QH TCGA-GV-A3QK 
        1.02         3.12         7.56         3.22         7.79         6.64 
TCGA-GV-A40E TCGA-K4-A3WV 
        6.38         4.64 

      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                         0.10                          0.46 
      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                        6.265                         7.445 
[1] "0.1 - 123.8 (6.3)" "0.5 - 131.2 (7.4)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
[1] "hr=" "1.2"
D4V2, continuous
D4V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  4(1Q23.3) CNV         16   56
  AMP PEAK  4(1Q23.3) WILD-TYPE   17   42
        clus
vv       AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE
  FEMALE                      16                            17
  MALE                        56                            42
D4V4, continuous
D4V5, continuous
D4V6, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  4(1Q23.3) CNV       17  2 28
  AMP PEAK  4(1Q23.3) WILD-TYPE 17  0 16
D4V7, multiclass
    clus
vv   AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE
  M0                      17                            17
  M1                       2                             0
  MX                      28                            16
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  4(1Q23.3) CNV       24  6 11  3  3
  AMP PEAK  4(1Q23.3) WILD-TYPE 21  3  3  0  5
D4V8, multiclass
D4V9, continuous
D4V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  AMP PEAK  4(1Q23.3) CNV             11        16       19
  AMP PEAK  4(1Q23.3) WILD-TYPE       15        11        7
D4V11, multiclass
           clus
vv          AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE
  STAGE II                       11                            15
  STAGE III                      16                            11
  STAGE IV                       19                             7

Clustering(5) Variable = Amp Peak  5(3p25.2)
D5V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  5(3P25.2) CNV       47 11
  AMP PEAK  5(3P25.2) WILD-TYPE 45 21
      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                           58                            66 
      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                           11                            21 
$`AMP PEAK  5(3P25.2) CNV`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BT-A20N TCGA-BT-A20W TCGA-BT-A2LA 
       12.79         7.33         2.66        26.10         8.35         5.88 
TCGA-BT-A2LD TCGA-BT-A3PH TCGA-CF-A1HR TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3YL 
        3.65         4.64         0.46         4.90         7.20         8.09 
TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD 
        2.53         2.14        31.40         8.98       118.88       100.47 
TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IM TCGA-DK-A3IN 
        1.81        10.59       123.85        75.32         7.82         8.22 
TCGA-DK-A3IS TCGA-DK-A3IU TCGA-E7-A3Y1 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3SJ 
       37.84        11.51         0.10         8.94         6.87        24.30 
TCGA-FD-A3SL TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE 
       10.98         7.89         6.84        15.16         4.08         2.33 
TCGA-G2-A2EF TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3OO 
       49.91        32.78        17.26        20.12         0.82         1.32 
TCGA-GC-A3RB TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JW 
        4.50         2.10         5.82         6.38         4.37         6.41 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40G 
        5.69         7.63         7.79         4.11         6.64         5.33 
TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        1.51         8.71         3.42         4.64 

$`AMP PEAK  5(3P25.2) WILD-TYPE`
TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20O TCGA-BT-A20P 
        6.74         6.58        11.93        19.00        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20X 
       19.46         5.06        14.89         8.61         5.06         8.25 
TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN 
        8.98         1.94         2.01         0.43         0.69        12.92 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF 
        5.46         5.19         7.04         8.91         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2I2 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IT 
        6.64         7.76         2.20         3.98        10.49         5.52 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-FD-A3B3 
        9.67         8.28        10.55       131.15        36.43         8.81 
TCGA-FD-A3B4 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA 
        8.32         4.01        11.05         8.94         7.96        32.02 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR 
        6.12         6.81         5.49         4.54        46.78        19.79 
TCGA-FD-A3SS TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3BM 
        1.94        26.50         5.65        26.93         7.04         2.86 
TCGA-GC-A3I6 TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 
        2.24         1.38         1.02         2.50         1.08         7.69 
TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JX TCGA-GV-A40E TCGA-H4-A2HQ 
        3.12         7.56         3.22         6.15         6.38         6.71 

      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                         0.10                          0.43 
      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                        7.035                         6.925 
[1] "0.1 - 123.8 (7.0)" "0.4 - 131.2 (6.9)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
[1] "hr=" "2"  
D5V2, continuous
D5V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  5(3P25.2) CNV         10   53
  AMP PEAK  5(3P25.2) WILD-TYPE   23   45
        clus
vv       AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE
  FEMALE                      10                            23
  MALE                        53                            45
D5V4, continuous
D5V5, continuous
D5V6, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  5(3P25.2) CNV       16  1 23
  AMP PEAK  5(3P25.2) WILD-TYPE 18  1 21
D5V7, multiclass
    clus
vv   AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE
  M0                      16                            18
  M1                       1                             1
  MX                      23                            21
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  5(3P25.2) CNV       21  4  9  2  4
  AMP PEAK  5(3P25.2) WILD-TYPE 24  5  5  1  4
D5V8, multiclass
D5V9, continuous
D5V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  AMP PEAK  5(3P25.2) CNV             14        11       14
  AMP PEAK  5(3P25.2) WILD-TYPE       12        16       12
D5V11, multiclass
           clus
vv          AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE
  STAGE II                       14                            12
  STAGE III                      11                            16
  STAGE IV                       14                            12

Clustering(6) Variable = Amp Peak  6(3q26.32)
D6V1, survival
                                sevent
clus2                             0  1
  AMP PEAK  6(3Q26.32) CNV       58 13
  AMP PEAK  6(3Q26.32) WILD-TYPE 34 19
      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                            71                             53 
      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                            13                             19 
$`AMP PEAK  6(3Q26.32) CNV`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         2.66         6.74        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA 
       26.10         5.06         5.06         8.35         8.25         5.88 
TCGA-BT-A3PH TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR 
        4.64         0.46         0.43        12.92         4.90         7.20 
TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AC 
        5.46         8.09         2.53        31.40         8.98       118.88 
TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A3IK TCGA-DK-A3IM 
      100.47         7.17         1.81        10.59         2.20         7.82 
TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IU TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 
       10.49        37.84        11.51        36.43         0.10         8.81 
TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL 
        8.32         6.87         8.94        32.02        24.30        10.98 
TCGA-FD-A43U TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EO TCGA-G2-A2ES 
        6.84         4.08        49.91        26.50        32.78        17.26 
TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC 
        7.04         0.82         2.24         1.32         4.50         1.38 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q 
        1.02         2.50         1.08         5.82         6.38         7.56 
TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK 
        6.41         6.15         7.63         7.79         4.11         6.64 
TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        5.33         6.71         8.71         3.42         4.64 

$`AMP PEAK  6(3Q26.32) WILD-TYPE`
TCGA-BT-A0S7 TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U 
        6.58        12.16        17.85        19.46        14.89         8.61 
TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A3QU 
        3.65         8.98         1.94         2.01         0.69         5.19 
TCGA-DK-A1A5 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I2 
        2.14         7.04         8.91         5.85         6.64         7.76 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IT TCGA-DK-A3IV 
      123.85        75.32         3.98         8.22         5.52         9.67 
TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3B8 
        8.28        10.55       131.15         8.94         4.01        11.05 
TCGA-FD-A3N6 TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ 
        7.96         6.12         6.81         5.49         4.54        46.78 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EK 
       19.79         1.94         7.89        15.16         2.33         5.65 
TCGA-G2-A2EL TCGA-G2-A3IE TCGA-GC-A3BM TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ 
       26.93        20.12         2.86         7.69         2.10         3.12 
TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A40E TCGA-H4-A2HO 
        3.22         4.37         5.69         6.38         1.51 

      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                          0.10                           0.69 
      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                        118.88                         131.15 
      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                          7.04                           6.81 
[1] "0.1 - 118.9 (7.0)" "0.7 - 131.2 (6.8)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
[1] "hr=" "2"  
D6V2, continuous
D6V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  6(3Q26.32) CNV         18   57
  AMP PEAK  6(3Q26.32) WILD-TYPE   15   41
        clus
vv       AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE
  FEMALE                       18                             15
  MALE                         57                             41
D6V4, continuous
D6V5, continuous
D6V6, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK  6(3Q26.32) CNV       20  1 24
  AMP PEAK  6(3Q26.32) WILD-TYPE 14  1 20
D6V7, multiclass
    clus
vv   AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE
  M0                       20                             14
  M1                        1                              1
  MX                       24                             20
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK  6(3Q26.32) CNV       29  3  8  1  4
  AMP PEAK  6(3Q26.32) WILD-TYPE 16  6  6  2  4
D6V8, multiclass
D6V9, continuous
D6V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  AMP PEAK  6(3Q26.32) CNV             16        17       11
  AMP PEAK  6(3Q26.32) WILD-TYPE       10        10       15
D6V11, multiclass
           clus
vv          AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE
  STAGE II                        16                             10
  STAGE III                       17                             10
  STAGE IV                        11                             15

Clustering(7) Variable = Amp Peak  7(4p16.3)
D7V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  7(4P16.3) CNV       20  4
  AMP PEAK  7(4P16.3) WILD-TYPE 72 28
      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                           24                           100 
      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                            4                            28 
$`AMP PEAK  7(4P16.3) CNV`
TCGA-BL-A0C8 TCGA-BT-A20P TCGA-BT-A20T TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A27C 
       12.79        17.85        14.89         1.94         2.01         0.69 
TCGA-CU-A3KJ TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AC TCGA-DK-A2I2 TCGA-DK-A2I6 
        5.46         2.14        31.40       118.88         7.76        75.32 
TCGA-DK-A3IM TCGA-DK-A3IS TCGA-FD-A3NA TCGA-FD-A3SL TCGA-G2-A2EO TCGA-G2-A2ES 
        7.82        37.84        32.02        10.98        32.78        17.26 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RC TCGA-GU-A42R TCGA-H4-A2HO TCGA-K4-A3WS 
        0.82         2.86         1.38         3.22         1.51         8.71 

$`AMP PEAK  7(4P16.3) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
        7.33         2.66         6.74         6.58        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20V 
       26.10        12.16        19.46         5.06         8.61         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
        8.35         8.25         5.88         3.65         4.64         8.98 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3QU 
        0.46         0.43        12.92         4.90         7.20         5.19 
TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD 
        8.09         2.53         8.98         7.04         8.91       100.47 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I4 
        7.17         5.85         6.64         1.81        10.59       123.85 
TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IU 
        2.20         3.98         8.22        10.49         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 
        9.67         8.28        10.55       131.15        36.43         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        8.81         8.32         8.94         6.87         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SJ TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO 
        8.94         7.96        24.30         6.12         6.81         5.49 
TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U 
        4.54        46.78        19.79         1.94         7.89         6.84 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK 
       15.16         4.08         2.33        49.91        26.50         5.65 
TCGA-G2-A2EL TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB 
       26.93         7.04        20.12         2.24         1.32         4.50 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ 
        1.02         2.50         1.08         7.69         2.10         3.12 
TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX 
        5.82         6.38         7.56         4.37         6.41         6.15 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E 
        5.69         7.63         7.79         4.11         6.64         6.38 
TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WU TCGA-K4-A3WV 
        5.33         6.71         3.42         4.64 

      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                         0.69                          0.10 
      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                       118.88                        131.15 
      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                        8.265                         6.825 
[1] "0.7 - 118.9 (8.3)" "0.1 - 131.2 (6.8)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
[1] "hr=" "2.7"
D7V2, continuous
D7V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  7(4P16.3) CNV          3   24
  AMP PEAK  7(4P16.3) WILD-TYPE   30   74
        clus
vv       AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE
  FEMALE                       3                            30
  MALE                        24                            74
D7V4, continuous
D7V5, continuous
D7V6, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  7(4P16.3) CNV        8  1  3
  AMP PEAK  7(4P16.3) WILD-TYPE 26  1 41
D7V7, multiclass
    clus
vv   AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE
  M0                       8                            26
  M1                       1                             1
  MX                       3                            41
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  7(4P16.3) CNV       10  0  1  0  0
  AMP PEAK  7(4P16.3) WILD-TYPE 35  9 13  3  8
D7V8, multiclass
D7V9, continuous
D7V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  AMP PEAK  7(4P16.3) CNV              8         4        1
  AMP PEAK  7(4P16.3) WILD-TYPE       18        23       25
D7V11, multiclass
           clus
vv          AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE
  STAGE II                        8                            18
  STAGE III                       4                            23
  STAGE IV                        1                            25

Clustering(8) Variable = Amp Peak  8(4q13.3)
D8V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  8(4Q13.3) CNV       13  4
  AMP PEAK  8(4Q13.3) WILD-TYPE 79 28
      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                           17                           107 
      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                            4                            28 
$`AMP PEAK  8(4Q13.3) CNV`
TCGA-BT-A20N TCGA-BT-A2LD TCGA-C4-A0F6 TCGA-CU-A3KJ TCGA-DK-A1A5 TCGA-DK-A1A7 
       26.10         3.65         2.01         5.46         2.14         8.98 
TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-FD-A3NA TCGA-FD-A3SR TCGA-G2-A2EJ TCGA-G2-A3VY 
        7.76        75.32        32.02        19.79        26.50         0.82 
TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GU-A42P TCGA-GV-A3JW TCGA-K4-A3WV 
        2.50         7.69         6.38         6.41         4.64 

$`AMP PEAK  8(4Q13.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T 
       19.00        12.16        17.85        19.46         5.06        14.89 
TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH 
        8.61         5.06         8.35         8.25         5.88         4.64 
TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN 
        8.98         1.94         0.46         0.43         0.69        12.92 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 
        4.90         7.20         5.19         8.09         2.53        31.40 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF 
        7.04         8.91       118.88       100.47         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IL 
        6.64         1.81        10.59       123.85         2.20         3.98 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
        7.82         8.22        10.49        37.84         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 
        9.67         8.28        10.55       131.15        36.43         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        8.81         8.32         8.94         6.87         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
        8.94         7.96        24.30        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U 
        5.49         4.54        46.78         1.94         7.89         6.84 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EK TCGA-G2-A2EL 
       15.16         4.08         2.33        49.91         5.65        26.93 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3BM TCGA-GC-A3I6 
       32.78        17.26         7.04        20.12         2.86         2.24 
TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A3OP 
        1.32         4.50         1.38         1.02         1.08         2.10 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX 
        3.12         5.82         7.56         3.22         4.37         6.15 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E 
        5.69         7.63         7.79         4.11         6.64         6.38 
TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        5.33         1.51         6.71         8.71         3.42 

      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                         0.82                          0.10 
      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                        75.32                        131.15 
      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                         6.41                          7.04 
[1] "0.8 - 75.3 (6.4)"  "0.1 - 131.2 (7.0)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
[1] "hr=" "1.4"
D8V2, continuous
D8V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  8(4Q13.3) CNV          8    9
  AMP PEAK  8(4Q13.3) WILD-TYPE   25   89
        clus
vv       AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE
  FEMALE                       8                            25
  MALE                         9                            89
D8V4, continuous
D8V5, continuous
D8V6, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  8(4Q13.3) CNV        3  0  5
  AMP PEAK  8(4Q13.3) WILD-TYPE 31  2 39
D8V7, multiclass
    clus
vv   AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE
  M0                       3                            31
  M1                       0                             2
  MX                       5                            39
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  8(4Q13.3) CNV        4  2  1  0  1
  AMP PEAK  8(4Q13.3) WILD-TYPE 41  7 13  3  7
D8V8, multiclass
D8V9, continuous
D8V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  AMP PEAK  8(4Q13.3) CNV              4         2        3
  AMP PEAK  8(4Q13.3) WILD-TYPE       22        25       23
D8V11, multiclass
           clus
vv          AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE
  STAGE II                        4                            22
  STAGE III                       2                            25
  STAGE IV                        3                            23

Clustering(9) Variable = Amp Peak  9(5p15.1)
D9V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  9(5P15.1) CNV       43 16
  AMP PEAK  9(5P15.1) WILD-TYPE 49 16
      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                           59                            65 
      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                           16                            16 
$`AMP PEAK  9(5P15.1) CNV`
TCGA-BL-A0C8 TCGA-BL-A3JM TCGA-BT-A20N TCGA-BT-A20P TCGA-BT-A20T TCGA-BT-A20V 
       12.79         6.74        26.10        17.85        14.89         5.06 
TCGA-BT-A20W TCGA-BT-A2LA TCGA-C4-A0EZ TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR 
        8.35         5.88         8.98         0.43        12.92         7.20 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1AD TCGA-DK-A2I4 TCGA-DK-A2I6 
        5.46         5.19         2.53       100.47       123.85        75.32 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WX TCGA-E5-A2PC 
        7.82         8.22        11.51         9.67        10.55        36.43 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SJ 
        8.81         8.32         8.94         8.94        32.02        24.30 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FJ-A3ZF TCGA-FT-A3EE 
        6.81         5.49         4.54        19.79         4.08         2.33 
TCGA-G2-A2EF TCGA-G2-A2EO TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3I6 
       49.91        32.78         7.04        20.12         0.82         2.24 
TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OS 
        1.32         4.50         1.02         1.08         2.10         5.82 
TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF 
        6.38         4.37         6.41         6.15         5.69         7.63 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ 
        7.79         4.11         6.38         5.33         6.71 

$`AMP PEAK  9(5P15.1) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20O 
        7.33         2.66         6.58        11.93        19.00        12.16 
TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20X TCGA-BT-A2LD TCGA-BT-A3PH 
       19.46         5.06         8.61         8.25         3.65         4.64 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A3YL 
        1.94         2.01         0.46         0.69         4.90         8.09 
TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC 
        2.14        31.40         8.98         7.04         8.91       118.88 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 
        7.17         5.85         6.64         1.81        10.59         7.76 
TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3WW 
        2.20         3.98        10.49        37.84         5.52         8.28 
TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 
      131.15         0.10         6.87         4.01        11.05         7.96 
TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SQ TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U 
       10.98         6.12        46.78         1.94         7.89         6.84 
TCGA-FJ-A3Z7 TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES TCGA-GC-A3BM 
       15.16        26.50         5.65        26.93        17.26         2.86 
TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R 
        1.38         2.50         7.69         3.12         7.56         3.22 
TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        6.64         1.51         8.71         3.42         4.64 

      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                         0.43                          0.10 
      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                         7.04                          6.87 
[1] "0.4 - 123.8 (7.0)" "0.1 - 131.2 (6.9)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
[1] "hr=" "1.1"
D9V2, continuous
D9V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  9(5P15.1) CNV         13   51
  AMP PEAK  9(5P15.1) WILD-TYPE   20   47
        clus
vv       AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE
  FEMALE                      13                            20
  MALE                        51                            47
D9V4, continuous
D9V5, continuous
D9V6, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  9(5P15.1) CNV       19  0 27
  AMP PEAK  9(5P15.1) WILD-TYPE 15  2 17
D9V7, multiclass
    clus
vv   AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE
  M0                      19                            15
  M1                       0                             2
  MX                      27                            17
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  9(5P15.1) CNV       25  7  5  1  8
  AMP PEAK  9(5P15.1) WILD-TYPE 20  2  9  2  0
D9V8, multiclass
D9V9, continuous
D9V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  AMP PEAK  9(5P15.1) CNV             16        17       13
  AMP PEAK  9(5P15.1) WILD-TYPE       10        10       13
D9V11, multiclass
           clus
vv          AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE
  STAGE II                       16                            10
  STAGE III                      17                            10
  STAGE IV                       13                            13

Clustering(10) Variable = Amp Peak 10(6p22.3)
D10V1, survival
                               sevent
clus2                            0  1
  AMP PEAK 10(6P22.3) CNV       42 12
  AMP PEAK 10(6P22.3) WILD-TYPE 50 20
      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                           54                            70 
      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                           12                            20 
$`AMP PEAK 10(6P22.3) CNV`
TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A20R TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD 
        2.66         6.58         5.06         8.35         5.88         3.65 
TCGA-C4-A0EZ TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1A6 
        8.98         0.43        12.92         5.19         2.14        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 
        8.98       118.88       100.47        10.59         7.76       123.85 
TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3WX 
       75.32         3.98         7.82        37.84        11.51        10.55 
TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3N5 TCGA-FD-A3SJ 
       36.43         8.81         6.87         4.01         8.94        24.30 
TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE 
        4.54        19.79         7.89        15.16         4.08         2.33 
TCGA-G2-A2EF TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB 
       49.91         0.82         2.86         2.24         1.32         4.50 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GU-A42P TCGA-GU-A42R 
        1.38         1.02         1.08         7.69         6.38         3.22 
TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QH TCGA-GV-A40E TCGA-GV-A40G TCGA-K4-A3WV 
        6.41         5.69         7.79         6.38         5.33         4.64 

$`AMP PEAK 10(6P22.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N 
       12.79         7.33         6.74        11.93        19.00        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V 
       12.16        17.85        19.46        14.89         8.61         5.06 
TCGA-BT-A20X TCGA-BT-A3PH TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C 
        8.25         4.64         1.94         2.01         0.46         0.69 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1AA 
        4.90         7.20         5.46         8.09         2.53         7.04 
TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A3IK 
        8.91         7.17         5.85         6.64         1.81         2.20 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY 
        8.22        10.49         5.52         9.67         8.28       131.15 
TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA 
        0.10         8.32         8.94        11.05         7.96        32.02 
TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A3SS 
       10.98         6.12         6.81         5.49        46.78         1.94 
TCGA-FD-A43U TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES 
        6.84        26.50         5.65        26.93        32.78        17.26 
TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3WC TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS 
        7.04        20.12         2.50         2.10         3.12         5.82 
TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A3QK 
        7.56         4.37         6.15         7.63         4.11         6.64 
TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        1.51         6.71         8.71         3.42 

      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                         0.43                          0.10 
      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                        6.495                         7.105 
[1] "0.4 - 123.8 (6.5)" "0.1 - 131.2 (7.1)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
[1] "hr=" "1.5"
D10V2, continuous
D10V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 10(6P22.3) CNV         15   40
  AMP PEAK 10(6P22.3) WILD-TYPE   18   58
        clus
vv       AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE
  FEMALE                      15                            18
  MALE                        40                            58
D10V4, continuous
D10V5, continuous
D10V6, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK 10(6P22.3) CNV       16  0 20
  AMP PEAK 10(6P22.3) WILD-TYPE 18  2 24
D10V7, multiclass
    clus
vv   AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE
  M0                      16                            18
  M1                       0                             2
  MX                      20                            24
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK 10(6P22.3) CNV       21  5  5  1  3
  AMP PEAK 10(6P22.3) WILD-TYPE 24  4  9  2  5
D10V8, multiclass
D10V9, continuous
D10V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  AMP PEAK 10(6P22.3) CNV             14        12       10
  AMP PEAK 10(6P22.3) WILD-TYPE       12        15       16
D10V11, multiclass
           clus
vv          AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE
  STAGE II                       14                            12
  STAGE III                      12                            15
  STAGE IV                       10                            16

Clustering(11) Variable = Amp Peak 11(6q12)
D11V1, survival
                             sevent
clus2                          0  1
  AMP PEAK 11(6Q12) CNV       19  3
  AMP PEAK 11(6Q12) WILD-TYPE 73 29
      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                         22                         102 
      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                          3                          29 
$`AMP PEAK 11(6Q12) CNV`
TCGA-BT-A0S7 TCGA-BT-A2LA TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-DK-A1AC TCGA-DK-A1AD 
        6.58         5.88         7.20         5.46       118.88       100.47 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3WX TCGA-FD-A3B7 TCGA-FT-A3EE 
       75.32         2.20         7.82        10.55         4.01         2.33 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3YS 
        0.82         2.86         1.32         4.50         1.38         1.08 
TCGA-GD-A2C5 TCGA-GV-A3JW TCGA-GV-A40E TCGA-GV-A40G 
        7.69         6.41         6.38         5.33 

$`AMP PEAK 11(6Q12) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         2.66         6.74        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T 
       26.10        12.16        17.85        19.46         5.06        14.89 
TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LD TCGA-BT-A3PH 
        8.61         5.06         8.35         8.25         3.65         4.64 
TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C 
        8.98         1.94         2.01         0.46         0.43         0.69 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 
       12.92         4.90         5.19         8.09         2.53         2.14 
TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF 
       31.40         8.98         7.04         8.91         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL 
        6.64         1.81        10.59         7.76       123.85         3.98 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV 
        8.22        10.49        37.84         5.52        11.51         9.67 
TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 
        8.28       131.15        36.43         0.10         8.81         8.32 
TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA 
        8.94         6.87        11.05         8.94         7.96        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP 
       24.30        10.98         6.12         6.81         5.49         4.54 
TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
       46.78        19.79         1.94         7.89         6.84        15.16 
TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO 
        4.08        49.91        26.50         5.65        26.93        32.78 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3I6 TCGA-GC-A3RD TCGA-GC-A3WC 
       17.26         7.04        20.12         2.24         1.02         2.50 
TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R 
        2.10         3.12         5.82         6.38         7.56         3.22 
TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI 
        4.37         6.15         5.69         7.63         7.79         4.11 
TCGA-GV-A3QK TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        6.64         1.51         6.71         8.71         3.42         4.64 

      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                       0.82                        0.10 
      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                     118.88                      131.15 
      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                      5.670                       7.445 
[1] "0.8 - 118.9 (5.7)" "0.1 - 131.2 (7.4)"
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
[1] "hr=" "1.7"
D11V2, continuous
D11V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 11(6Q12) CNV          3   19
  AMP PEAK 11(6Q12) WILD-TYPE   30   79
        clus
vv       AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE
  FEMALE                     3                          30
  MALE                      19                          79
D11V4, continuous
D11V5, continuous
D11V6, continuous
                             vv
clus                          M0 M1 MX
  AMP PEAK 11(6Q12) CNV        8  0  6
  AMP PEAK 11(6Q12) WILD-TYPE 26  2 38
D11V7, multiclass
    clus
vv   AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE
  M0                     8                          26
  M1                     0                           2
  MX                     6                          38
                             vv
clus                          N0 N1 N2 N3 NX
  AMP PEAK 11(6Q12) CNV       10  1  1  0  2
  AMP PEAK 11(6Q12) WILD-TYPE 35  8 13  3  6
D11V8, multiclass
D11V9, continuous
D11V10, continuous
                             vv
clus                          STAGE II STAGE III STAGE IV
  AMP PEAK 11(6Q12) CNV              7         6        2
  AMP PEAK 11(6Q12) WILD-TYPE       19        21       24
D11V11, multiclass
           clus
vv          AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE
  STAGE II                      7                          19
  STAGE III                     6                          21
  STAGE IV                      2                          24

Clustering(12) Variable = Amp Peak 12(6q21)
D12V1, survival
                             sevent
clus2                          0  1
  AMP PEAK 12(6Q21) CNV       12  3
  AMP PEAK 12(6Q21) WILD-TYPE 80 29
      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                         15                         109 
      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                          3                          29 
$`AMP PEAK 12(6Q21) CNV`
TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A2LA TCGA-CF-A1HS TCGA-CU-A0YR TCGA-DK-A1A3 
        6.58        19.00         5.88         0.43         7.20         2.53 
TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A3WX TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-GC-A3BM 
        8.98       118.88        10.55        15.16         4.08         2.86 
TCGA-GC-A3OO TCGA-GC-A3YS TCGA-GD-A2C5 
        1.32         1.08         7.69 

$`AMP PEAK 12(6Q21) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20N 
       12.79         7.33         2.66         6.74        11.93        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U 
       12.16        17.85        19.46         5.06        14.89         8.61 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
        5.06         8.35         8.25         3.65         4.64         8.98 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO 
        1.94         2.01         0.46         0.69        12.92         4.90 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AA 
        5.46         5.19         8.09         2.14        31.40         7.04 
TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX 
        8.91       100.47         7.17         5.85         6.64         1.81 
TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL 
       10.59         7.76       123.85        75.32         2.20         3.98 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
        7.82         8.22        10.49        37.84         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 
        9.67         8.28       131.15        36.43         0.10         8.81 
TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 
        8.32         8.94         6.87         4.01        11.05         8.94 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
        7.96        32.02        24.30        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N 
        5.49         4.54        46.78        19.79         1.94         7.89 
TCGA-FD-A43U TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
        6.84         2.33        49.91        26.50         5.65        26.93 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3I6 
       32.78        17.26         7.04        20.12         0.82         2.24 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GD-A3OP TCGA-GD-A3OQ 
        4.50         1.38         1.02         2.50         2.10         3.12 
TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW 
        5.82         6.38         7.56         3.22         4.37         6.41 
TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK 
        6.15         5.69         7.63         7.79         4.11         6.64 
TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        6.38         5.33         1.51         6.71         8.71         3.42 
TCGA-K4-A3WV 
        4.64 

      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                       0.43                        0.10 
      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                     118.88                      131.15 
      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                       6.58                        7.04 
[1] "0.4 - 118.9 (6.6)" "0.1 - 131.2 (7.0)"
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
      "AMP PEAK 12(6Q21) CNV"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
      "AMP PEAK 12(6Q21) CNV"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
      "AMP PEAK 12(6Q21) CNV"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
[1] "hr=" "1.1"
D12V2, continuous
D12V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 12(6Q21) CNV          4   11
  AMP PEAK 12(6Q21) WILD-TYPE   29   87
        clus
vv       AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE
  FEMALE                     4                          29
  MALE                      11                          87
D12V4, continuous
D12V5, continuous
D12V6, continuous
                             vv
clus                          M0 M1 MX
  AMP PEAK 12(6Q21) CNV        4  0  2
  AMP PEAK 12(6Q21) WILD-TYPE 30  2 42
D12V7, multiclass
    clus
vv   AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE
  M0                     4                          30
  M1                     0                           2
  MX                     2                          42
                             vv
clus                          N0 N1 N2 N3 NX
  AMP PEAK 12(6Q21) CNV        4  1  1  0  0
  AMP PEAK 12(6Q21) WILD-TYPE 41  8 13  3  8
D12V8, multiclass
D12V9, continuous
D12V10, continuous
                             vv
clus                          STAGE II STAGE III STAGE IV
  AMP PEAK 12(6Q21) CNV              2         2        2
  AMP PEAK 12(6Q21) WILD-TYPE       24        25       24
D12V11, multiclass
           clus
vv          AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE
  STAGE II                      2                          24
  STAGE III                     2                          25
  STAGE IV                      2                          24

Clustering(13) Variable = Amp Peak 13(7p11.2)
D13V1, survival
                               sevent
clus2                            0  1
  AMP PEAK 13(7P11.2) CNV       48 19
  AMP PEAK 13(7P11.2) WILD-TYPE 44 13
      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                           67                            57 
      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                           19                            13 
$`AMP PEAK 13(7P11.2) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O 
       12.79         2.66         6.58        19.00        26.10        12.16 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0F6 
        5.06         8.35         8.25         5.88         3.65         2.01 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-DK-A1A3 TCGA-DK-A1A5 
        0.43        12.92         4.90         5.46         2.53         2.14 
TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 
        8.98       118.88       100.47         1.81        10.59         7.76 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN 
      123.85        75.32         2.20         3.98         7.82         8.22 
TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3IV TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B5 
       37.84        11.51         9.67        36.43         8.81         8.94 
TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-FD-A3SQ TCGA-FD-A3SR 
        6.87         4.01         8.94        24.30        46.78        19.79 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EO 
        1.94         7.89         6.84         4.08         2.33        32.78 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD 
        0.82         2.86         2.24         4.50         1.38         1.02 
TCGA-GD-A2C5 TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GV-A3JW TCGA-GV-A3JZ 
        7.69         5.82         6.38         7.56         6.41         5.69 
TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ 
        7.63         7.79         6.64         6.38         5.33         6.71 
TCGA-K4-A3WV 
        4.64 

$`AMP PEAK 13(7P11.2) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
        7.33         6.74        11.93        17.85        19.46         5.06 
TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HR 
       14.89         8.61         4.64         8.98         1.94         0.46 
TCGA-CF-A27C TCGA-CU-A0YR TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A6 TCGA-DK-A1AA 
        0.69         7.20         5.19         8.09        31.40         7.04 
TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A3IQ TCGA-DK-A3IT 
        8.91         7.17         5.85         6.64        10.49         5.52 
TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B8 
        8.28        10.55       131.15         0.10         8.32        11.05 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO 
        7.96        32.02        10.98         6.12         6.81         5.49 
TCGA-FD-A3SP TCGA-FJ-A3Z7 TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
        4.54        15.16        49.91        26.50         5.65        26.93 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3OO TCGA-GC-A3WC TCGA-GC-A3YS 
       17.26         7.04        20.12         1.32         2.50         1.08 
TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3QI 
        2.10         3.12         3.22         4.37         6.15         4.11 
TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        1.51         8.71         3.42 

      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                         0.43                          0.10 
      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                         6.84                          7.04 
[1] "0.4 - 123.8 (6.8)" "0.1 - 131.2 (7.0)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
[1] "hr=" "1.2"
D13V2, continuous
D13V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 13(7P11.2) CNV         18   52
  AMP PEAK 13(7P11.2) WILD-TYPE   15   46
        clus
vv       AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE
  FEMALE                      18                            15
  MALE                        52                            46
D13V4, continuous
D13V5, continuous
D13V6, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK 13(7P11.2) CNV       21  0 22
  AMP PEAK 13(7P11.2) WILD-TYPE 13  2 22
D13V7, multiclass
    clus
vv   AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE
  M0                      21                            13
  M1                       0                             2
  MX                      22                            22
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK 13(7P11.2) CNV       23  4  9  2  5
  AMP PEAK 13(7P11.2) WILD-TYPE 22  5  5  1  3
D13V8, multiclass
D13V9, continuous
D13V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  AMP PEAK 13(7P11.2) CNV             16        13       14
  AMP PEAK 13(7P11.2) WILD-TYPE       10        14       12
D13V11, multiclass
           clus
vv          AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE
  STAGE II                       16                            10
  STAGE III                      13                            14
  STAGE IV                       14                            12

Clustering(14) Variable = Amp Peak 14(8p11.23)
D14V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 14(8P11.23) CNV       31 11
  AMP PEAK 14(8P11.23) WILD-TYPE 61 21
      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                            42                             82 
      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                            11                             21 
$`AMP PEAK 14(8P11.23) CNV`
TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20N TCGA-BT-A20V TCGA-BT-A2LA TCGA-BT-A2LD 
        2.66         6.74        26.10         5.06         5.88         3.65 
TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1AD TCGA-DK-A2I1 
        2.01         0.69         5.19         2.14       100.47        10.59 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3WX 
       75.32         2.20        10.49        37.84        11.51        10.55 
TCGA-E5-A2PC TCGA-FD-A3B7 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SM TCGA-FD-A3SQ 
       36.43         4.01        32.02        24.30         6.12        46.78 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43U TCGA-FT-A3EE TCGA-G2-A2ES TCGA-G2-A3IE 
       19.79         1.94         6.84         2.33        17.26        20.12 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RD TCGA-GD-A2C5 TCGA-GV-A3JV 
        0.82         2.86         2.24         1.02         7.69         4.37 
TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3QI TCGA-GV-A40E TCGA-K4-A3WU TCGA-K4-A3WV 
        6.41         6.15         4.11         6.38         3.42         4.64 

$`AMP PEAK 14(8P11.23) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20O 
       12.79         7.33         6.58        11.93        19.00        12.16 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20W 
       17.85        19.46         5.06        14.89         8.61         8.35 
TCGA-BT-A20X TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A1HS 
        8.25         4.64         8.98         1.94         0.46         0.43 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 
       12.92         4.90         7.20         5.46         8.09         2.53 
TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE 
       31.40         8.98         7.04         8.91       118.88         7.17 
TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL 
        5.85         6.64         1.81         7.76       123.85         3.98 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY 
        7.82         8.22         5.52         9.67         8.28       131.15 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B8 
        0.10         8.81         8.32         8.94         6.87        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SL TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP 
        8.94         7.96        10.98         6.81         5.49         4.54 
TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK 
        7.89        15.16         4.08        49.91        26.50         5.65 
TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A3IB TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC 
       26.93        32.78         7.04         1.32         4.50         1.38 
TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P 
        2.50         1.08         2.10         3.12         5.82         6.38 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QK 
        7.56         3.22         5.69         7.63         7.79         6.64 
TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS 
        5.33         1.51         6.71         8.71 

      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                          0.69                           0.10 
      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                        100.47                         131.15 
      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                         6.135                          7.445 
[1] "0.7 - 100.5 (6.1)" "0.1 - 131.2 (7.4)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
[1] "hr=" "1.2"
D14V2, continuous
D14V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 14(8P11.23) CNV         10   35
  AMP PEAK 14(8P11.23) WILD-TYPE   23   63
        clus
vv       AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE
  FEMALE                       10                             23
  MALE                         35                             63
D14V4, continuous
D14V5, continuous
D14V6, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 14(8P11.23) CNV       13  1 18
  AMP PEAK 14(8P11.23) WILD-TYPE 21  1 26
D14V7, multiclass
    clus
vv   AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE
  M0                       13                             21
  M1                        1                              1
  MX                       18                             26
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 14(8P11.23) CNV       16  4  7  1  4
  AMP PEAK 14(8P11.23) WILD-TYPE 29  5  7  2  4
D14V8, multiclass
D14V9, continuous
D14V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  AMP PEAK 14(8P11.23) CNV             11         9       11
  AMP PEAK 14(8P11.23) WILD-TYPE       15        18       15
D14V11, multiclass
           clus
vv          AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE
  STAGE II                        11                             15
  STAGE III                        9                             18
  STAGE IV                        11                             15

Clustering(15) Variable = Amp Peak 15(8p11.21)
D15V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 15(8P11.21) CNV       35  8
  AMP PEAK 15(8P11.21) WILD-TYPE 57 24
      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                            43                             81 
      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                             8                             24 
$`AMP PEAK 15(8P11.21) CNV`
TCGA-BL-A3JM TCGA-BT-A20N TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0F6 
        6.74        26.10         8.35         5.88         3.65         2.01 
TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AD 
        0.69        12.92         5.19        31.40         8.98       100.47 
TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IQ TCGA-DK-A3IS 
       10.59       123.85        75.32         2.20        10.49        37.84 
TCGA-DK-A3IU TCGA-DK-A3WX TCGA-E5-A2PC TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SQ 
       11.51        10.55        36.43        32.02        24.30        46.78 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FT-A3EE TCGA-G2-A2ES 
       19.79         1.94         7.89         6.84         2.33        17.26 
TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GD-A3OS TCGA-GV-A3JV TCGA-GV-A3JX 
        2.86         2.24         4.50         5.82         4.37         6.15 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40E TCGA-K4-A3WS 
        5.69         7.63         7.79         4.11         6.38         8.71 
TCGA-K4-A3WU 
        3.42 

$`AMP PEAK 15(8P11.21) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         2.66         6.58        11.93        19.00 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U 
       12.16        17.85        19.46         5.06        14.89         8.61 
TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HR 
        5.06         8.25         4.64         8.98         1.94         0.46 
TCGA-CF-A1HS TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 
        0.43         4.90         7.20         5.46         8.09         2.53 
TCGA-DK-A1A5 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF 
        2.14         7.04         8.91       118.88         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN 
        6.64         1.81         7.76         3.98         7.82         8.22 
TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 
        5.52         9.67         8.28       131.15         0.10         8.81 
TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 
        8.32         8.94         6.87         4.01        11.05         8.94 
TCGA-FD-A3N6 TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP 
        7.96        10.98         6.12         6.81         5.49         4.54 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
       15.16         4.08        49.91        26.50         5.65        26.93 
TCGA-G2-A2EO TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3OO TCGA-GC-A3RC 
       32.78         7.04        20.12         0.82         1.32         1.38 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ 
        1.02         2.50         1.08         7.69         2.10         3.12 
TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3QK TCGA-GV-A40G 
        6.38         7.56         3.22         6.41         6.64         5.33 
TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WV 
        1.51         6.71         4.64 

      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                          0.69                           0.10 
      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                        123.85                         131.15 
      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                          7.79                           6.81 
[1] "0.7 - 123.8 (7.8)" "0.1 - 131.2 (6.8)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
[1] "hr=" "2.7"
D15V2, continuous
D15V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 15(8P11.21) CNV          8   37
  AMP PEAK 15(8P11.21) WILD-TYPE   25   61
        clus
vv       AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE
  FEMALE                        8                             25
  MALE                         37                             61
D15V4, continuous
D15V5, continuous
D15V6, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 15(8P11.21) CNV       13  0 20
  AMP PEAK 15(8P11.21) WILD-TYPE 21  2 24
D15V7, multiclass
    clus
vv   AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE
  M0                       13                             21
  M1                        0                              2
  MX                       20                             24
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 15(8P11.21) CNV       17  4  7  2  3
  AMP PEAK 15(8P11.21) WILD-TYPE 28  5  7  1  5
D15V8, multiclass
D15V9, continuous
D15V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  AMP PEAK 15(8P11.21) CNV              8        11       12
  AMP PEAK 15(8P11.21) WILD-TYPE       18        16       14
D15V11, multiclass
           clus
vv          AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE
  STAGE II                         8                             18
  STAGE III                       11                             16
  STAGE IV                        12                             14

Clustering(16) Variable = Amp Peak 16(8q22.3)
D16V1, survival
                               sevent
clus2                            0  1
  AMP PEAK 16(8Q22.3) CNV       61 18
  AMP PEAK 16(8Q22.3) WILD-TYPE 31 14
      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                           79                            45 
      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                           18                            14 
$`AMP PEAK 16(8Q22.3) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20T 
       12.79         2.66         6.74        19.00        26.10        14.89 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0EZ 
        5.06         8.35         8.25         5.88         3.65         8.98 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YR 
        1.94         2.01         0.43         0.69        12.92         7.20 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 
        5.46         5.19         2.53         2.14        31.40         8.98 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 
      118.88       100.47         7.17        10.59       123.85        75.32 
TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT 
        2.20         7.82         8.22        10.49        37.84         5.52 
TCGA-DK-A3IU TCGA-DK-A3WX TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 
       11.51        10.55        36.43         8.94         6.87         4.01 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43N 
        7.96        32.02        24.30         4.54        46.78         7.89 
TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES 
        6.84        15.16         2.33         5.65        32.78        17.26 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3RD 
       20.12         0.82         2.86         2.24         4.50         1.02 
TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P 
        2.50         1.08         2.10         3.12         5.82         6.38 
TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF 
        3.22         4.37         6.41         6.15         5.69         7.63 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40E TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS 
        7.79         4.11         6.38         1.51         6.71         8.71 
TCGA-K4-A3WU 
        3.42 

$`AMP PEAK 16(8Q22.3) WILD-TYPE`
TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q 
        7.33         6.58        11.93        12.16        17.85        19.46 
TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A3PH TCGA-CF-A1HR TCGA-CU-A0YO TCGA-CU-A3YL 
        5.06         8.61         4.64         0.46         4.90         8.09 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 
        7.04         8.91         5.85         6.64         1.81         7.76 
TCGA-DK-A3IL TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 
        3.98         9.67         8.28       131.15         0.10         8.81 
TCGA-FD-A3B4 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
        8.32        11.05         8.94        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ 
        5.49        19.79         1.94         4.08        49.91        26.50 
TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3OO TCGA-GC-A3RC TCGA-GD-A2C5 TCGA-GU-A42Q 
       26.93         7.04         1.32         1.38         7.69         7.56 
TCGA-GV-A3QK TCGA-GV-A40G TCGA-K4-A3WV 
        6.64         5.33         4.64 

      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                         0.43                          0.10 
      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                         6.74                          7.33 
[1] "0.4 - 123.8 (6.7)" "0.1 - 131.2 (7.3)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
[1] "hr=" "1.5"
D16V2, continuous
D16V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 16(8Q22.3) CNV         16   66
  AMP PEAK 16(8Q22.3) WILD-TYPE   17   32
        clus
vv       AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE
  FEMALE                      16                            17
  MALE                        66                            32
D16V4, continuous
D16V5, continuous
D16V6, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK 16(8Q22.3) CNV       20  0 31
  AMP PEAK 16(8Q22.3) WILD-TYPE 14  2 13
D16V7, multiclass
    clus
vv   AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE
  M0                      20                            14
  M1                       0                             2
  MX                      31                            13
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK 16(8Q22.3) CNV       28  8  8  1  5
  AMP PEAK 16(8Q22.3) WILD-TYPE 17  1  6  2  3
D16V8, multiclass
D16V9, continuous
D16V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  AMP PEAK 16(8Q22.3) CNV             15        19       16
  AMP PEAK 16(8Q22.3) WILD-TYPE       11         8       10
D16V11, multiclass
           clus
vv          AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE
  STAGE II                       15                            11
  STAGE III                      19                             8
  STAGE IV                       16                            10

Clustering(17) Variable = Amp Peak 17(8q24.21)
D17V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 17(8Q24.21) CNV       59 17
  AMP PEAK 17(8Q24.21) WILD-TYPE 33 15
      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                            76                             48 
      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                            17                             15 
$`AMP PEAK 17(8Q24.21) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N 
       12.79         2.66         6.74        11.93        19.00        26.10 
TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-C4-A0EZ 
       14.89         5.06         8.35         8.25         5.88         8.98 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YR 
        1.94         2.01         0.43         0.69        12.92         7.20 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 
        5.46         5.19         2.53         2.14        31.40         8.98 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 
      118.88       100.47         7.17        10.59       123.85        75.32 
TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT 
        2.20         7.82         8.22        10.49        37.84         5.52 
TCGA-DK-A3IU TCGA-DK-A3WX TCGA-E5-A2PC TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3N6 
       11.51        10.55        36.43         6.87         4.01         7.96 
TCGA-FD-A3SJ TCGA-FD-A3SQ TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3ZF TCGA-FT-A3EE 
       24.30        46.78         7.89         6.84         4.08         2.33 
TCGA-G2-A2EF TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE TCGA-G2-A3VY 
       49.91         5.65        32.78        17.26        20.12         0.82 
TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS 
        2.86         2.24         4.50         1.02         2.50         1.08 
TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GV-A3JV 
        2.10         3.12         5.82         6.38         7.56         4.37 
TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI 
        6.41         6.15         5.69         7.63         7.79         4.11 
TCGA-GV-A40E TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        6.38         6.71         8.71         3.42 

$`AMP PEAK 17(8Q24.21) WILD-TYPE`
TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
        7.33         6.58        12.16        17.85        19.46         5.06 
TCGA-BT-A20U TCGA-BT-A2LD TCGA-BT-A3PH TCGA-CF-A1HR TCGA-CU-A0YO TCGA-CU-A3YL 
        8.61         3.65         4.64         0.46         4.90         8.09 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 
        7.04         8.91         5.85         6.64         1.81         7.76 
TCGA-DK-A3IL TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 
        3.98         9.67         8.28       131.15         0.10         8.81 
TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SL 
        8.32         8.94        11.05         8.94        32.02        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FD-A3SS 
        6.12         6.81         5.49         4.54        19.79         1.94 
TCGA-FJ-A3Z7 TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3OO TCGA-GC-A3RC 
       15.16        26.50        26.93         7.04         1.32         1.38 
TCGA-GD-A2C5 TCGA-GU-A42R TCGA-GV-A3QK TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WV 
        7.69         3.22         6.64         5.33         1.51         4.64 

      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                          0.43                           0.10 
      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                        123.85                         131.15 
      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                         6.855                          7.040 
[1] "0.4 - 123.8 (6.9)" "0.1 - 131.2 (7.0)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
[1] "hr=" "1.7"
D17V2, continuous
D17V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 17(8Q24.21) CNV         16   64
  AMP PEAK 17(8Q24.21) WILD-TYPE   17   34
        clus
vv       AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE
  FEMALE                       16                             17
  MALE                         64                             34
D17V4, continuous
D17V5, continuous
D17V6, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 17(8Q24.21) CNV       22  0 26
  AMP PEAK 17(8Q24.21) WILD-TYPE 12  2 18
D17V7, multiclass
    clus
vv   AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE
  M0                       22                             12
  M1                        0                              2
  MX                       26                             18
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 17(8Q24.21) CNV       29  6  7  1  5
  AMP PEAK 17(8Q24.21) WILD-TYPE 16  3  7  2  3
D17V8, multiclass
D17V9, continuous
D17V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  AMP PEAK 17(8Q24.21) CNV             14        20       13
  AMP PEAK 17(8Q24.21) WILD-TYPE       12         7       13
D17V11, multiclass
           clus
vv          AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE
  STAGE II                        14                             12
  STAGE III                       20                              7
  STAGE IV                        13                             13

Clustering(18) Variable = Amp Peak 18(10p15.1)
D18V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 18(10P15.1) CNV       36 17
  AMP PEAK 18(10P15.1) WILD-TYPE 56 15
      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                            53                             71 
      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                            17                             15 
$`AMP PEAK 18(10P15.1) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A20N TCGA-BT-A20Q TCGA-BT-A20R 
       12.79         2.66         6.58        26.10        19.46         5.06 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F6 
        5.06         8.35         3.65         4.64         8.98         2.01 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 
        0.43        12.92         5.46         5.19         2.53         2.14 
TCGA-DK-A1A6 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I6 
       31.40       118.88       100.47         1.81        10.59        75.32 
TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IV TCGA-FD-A3B3 TCGA-FD-A3B5 
        3.98         7.82         8.22         9.67         8.81         8.94 
TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SR TCGA-FD-A3SS 
        6.87         8.94        32.02        24.30        19.79         1.94 
TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE 
        7.89        15.16         2.33        32.78        17.26        20.12 
TCGA-G2-A3VY TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GD-A2C5 TCGA-GD-A3OS TCGA-GU-A42P 
        0.82         4.50         1.02         7.69         5.82         6.38 
TCGA-GV-A3JW TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A40E TCGA-K4-A3WS 
        6.41         7.63         7.79         6.38         8.71 

$`AMP PEAK 18(10P15.1) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20O TCGA-BT-A20P 
        7.33         6.74        11.93        19.00        12.16        17.85 
TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20X TCGA-BT-A2LA TCGA-C4-A0F0 TCGA-CF-A1HR 
       14.89         8.61         8.25         5.88         1.94         0.46 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3YL TCGA-DK-A1A7 TCGA-DK-A1AA 
        0.69         4.90         7.20         8.09         8.98         7.04 
TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I2 TCGA-DK-A2I4 
        8.91         7.17         5.85         6.64         7.76       123.85 
TCGA-DK-A3IK TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3WW 
        2.20        10.49        37.84         5.52        11.51         8.28 
TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B7 
       10.55       131.15        36.43         0.10         8.32         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO 
       11.05         7.96        10.98         6.12         6.81         5.49 
TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43U TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ 
        4.54        46.78         6.84         4.08        49.91        26.50 
TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO 
        5.65        26.93         7.04         2.86         2.24         1.32 
TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GU-A42Q 
        1.38         2.50         1.08         2.10         3.12         7.56 
TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QI TCGA-GV-A3QK 
        3.22         4.37         6.15         5.69         4.11         6.64 
TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WU TCGA-K4-A3WV 
        5.33         1.51         6.71         3.42         4.64 

      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                          0.43                           0.10 
      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                        118.88                         131.15 
      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                          7.79                           6.74 
[1] "0.4 - 118.9 (7.8)" "0.1 - 131.2 (6.7)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
[1] "hr=" "1.2"
D18V2, continuous
D18V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 18(10P15.1) CNV         14   42
  AMP PEAK 18(10P15.1) WILD-TYPE   19   56
        clus
vv       AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE
  FEMALE                       14                             19
  MALE                         42                             56
D18V4, continuous
D18V5, continuous
D18V6, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 18(10P15.1) CNV       12  0 20
  AMP PEAK 18(10P15.1) WILD-TYPE 22  2 24
D18V7, multiclass
    clus
vv   AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE
  M0                       12                             22
  M1                        0                              2
  MX                       20                             24
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 18(10P15.1) CNV       14  4  7  1  6
  AMP PEAK 18(10P15.1) WILD-TYPE 31  5  7  2  2
D18V8, multiclass
D18V9, continuous
D18V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  AMP PEAK 18(10P15.1) CNV             11        10       11
  AMP PEAK 18(10P15.1) WILD-TYPE       15        17       15
D18V11, multiclass
           clus
vv          AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE
  STAGE II                        11                             15
  STAGE III                       10                             17
  STAGE IV                        11                             15

Clustering(19) Variable = Amp Peak 19(11q13.3)
D19V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 19(11Q13.3) CNV       37 12
  AMP PEAK 19(11Q13.3) WILD-TYPE 55 20
      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                            49                             75 
      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                            12                             20 
$`AMP PEAK 19(11Q13.3) CNV`
TCGA-BL-A13J TCGA-BT-A20N TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HS 
        2.66        26.10         5.88         4.64         2.01         0.43 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-DK-A1A3 TCGA-DK-A1A5 
       12.92         4.90         7.20         5.46         2.53         2.14 
TCGA-DK-A1A6 TCGA-DK-A1AF TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IL 
       31.40         5.85        10.59         7.76        75.32         3.98 
TCGA-DK-A3IM TCGA-DK-A3IQ TCGA-DK-A3WX TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3B6 
        7.82        10.49        10.55        36.43         8.94         6.87 
TCGA-FD-A3B7 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
        4.01        32.02        24.30         7.89         6.84        15.16 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3I6 TCGA-GC-A3RC TCGA-GC-A3RD 
       17.26         7.04        20.12         2.24         1.38         1.02 
TCGA-GD-A2C5 TCGA-GD-A3OS TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QF 
        7.69         5.82         4.37         6.41         5.69         7.63 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ 
        7.79         4.11         6.64         6.38         5.33         6.71 
TCGA-K4-A3WV 
        4.64 

$`AMP PEAK 19(11Q13.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         6.74         6.58        11.93        19.00 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U 
       12.16        17.85        19.46         5.06        14.89         8.61 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 
        5.06         8.35         8.25         3.65         8.98         1.94 
TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A7 TCGA-DK-A1AA 
        0.46         0.69         5.19         8.09         8.98         7.04 
TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AG TCGA-DK-A2HX 
        8.91       118.88       100.47         7.17         6.64         1.81 
TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IN TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
      123.85         2.20         8.22        37.84         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 
        9.67         8.28       131.15         0.10         8.81         8.32 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
       11.05         8.94         7.96        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FJ-A3ZF 
        5.49         4.54        46.78        19.79         1.94         4.08 
TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO 
        2.33        49.91        26.50         5.65        26.93        32.78 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3WC TCGA-GC-A3YS 
        0.82         2.86         1.32         4.50         2.50         1.08 
TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JX 
        2.10         3.12         6.38         7.56         3.22         6.15 
TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        1.51         8.71         3.42 

      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                          0.43                           0.10 
      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                         75.32                         131.15 
      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                          6.71                           7.33 
[1] "0.4 - 75.3 (6.7)"  "0.1 - 131.2 (7.3)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
[1] "hr=" "1.1"
D19V2, continuous
D19V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 19(11Q13.3) CNV         14   37
  AMP PEAK 19(11Q13.3) WILD-TYPE   19   61
        clus
vv       AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE
  FEMALE                       14                             19
  MALE                         37                             61
D19V4, continuous
D19V5, continuous
D19V6, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 19(11Q13.3) CNV       10  0 23
  AMP PEAK 19(11Q13.3) WILD-TYPE 24  2 21
D19V7, multiclass
    clus
vv   AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE
  M0                       10                             24
  M1                        0                              2
  MX                       23                             21
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 19(11Q13.3) CNV       15  3  8  1  6
  AMP PEAK 19(11Q13.3) WILD-TYPE 30  6  6  2  2
D19V8, multiclass
D19V9, continuous
D19V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  AMP PEAK 19(11Q13.3) CNV             12         9       11
  AMP PEAK 19(11Q13.3) WILD-TYPE       14        18       15
D19V11, multiclass
           clus
vv          AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE
  STAGE II                        12                             14
  STAGE III                        9                             18
  STAGE IV                        11                             15

Clustering(20) Variable = Amp Peak 20(12q15)
D20V1, survival
                              sevent
clus2                           0  1
  AMP PEAK 20(12Q15) CNV       27 12
  AMP PEAK 20(12Q15) WILD-TYPE 65 20
      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                          39                           85 
      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                          12                           20 
$`AMP PEAK 20(12Q15) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20N 
       12.79         2.66         6.74         6.58        19.00        26.10 
TCGA-BT-A20P TCGA-BT-A20R TCGA-BT-A20V TCGA-BT-A20X TCGA-C4-A0F6 TCGA-CU-A0YO 
       17.85         5.06         5.06         8.25         2.01         4.90 
TCGA-CU-A0YR TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AC 
        7.20         2.53         2.14        31.40         8.98       118.88 
TCGA-DK-A2I4 TCGA-DK-A3IS TCGA-DK-A3WX TCGA-FJ-A3Z7 TCGA-G2-A2EF TCGA-G2-A2EK 
      123.85        37.84        10.55        15.16        49.91         5.65 
TCGA-G2-A2EO TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RD TCGA-GU-A42R 
       32.78         0.82         2.86         2.24         1.02         3.22 
TCGA-GV-A3JW TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO 
        6.41         7.79         4.11         6.64         6.38         1.51 
TCGA-H4-A2HQ TCGA-K4-A3WU TCGA-K4-A3WV 
        6.71         3.42         4.64 

$`AMP PEAK 20(12Q15) WILD-TYPE`
TCGA-BL-A13I TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U 
        7.33        11.93        12.16        19.46        14.89         8.61 
TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 
        8.35         5.88         3.65         4.64         8.98         1.94 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-CU-A3QU 
        0.46         0.43         0.69        12.92         5.46         5.19 
TCGA-CU-A3YL TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF 
        8.09         7.04         8.91       100.47         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IK 
        6.64         1.81        10.59         7.76        75.32         2.20 
TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IU 
        3.98         7.82         8.22        10.49         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 
        9.67         8.28       131.15        36.43         0.10         8.81 
TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 
        8.32         8.94         6.87         4.01        11.05         8.94 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
        7.96        32.02        24.30        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N 
        5.49         4.54        46.78        19.79         1.94         7.89 
TCGA-FD-A43U TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A2ES 
        6.84         4.08         2.33        26.50        26.93        17.26 
TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC 
        7.04        20.12         1.32         4.50         1.38         2.50 
TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P 
        1.08         7.69         2.10         3.12         5.82         6.38 
TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A40G 
        7.56         4.37         6.15         5.69         7.63         5.33 
TCGA-K4-A3WS 
        8.71 

      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                        0.82                         0.10 
      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                      123.85                       131.15 
      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                        6.58                         7.33 
[1] "0.8 - 123.8 (6.6)" "0.1 - 131.2 (7.3)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
[1] "hr=" "1.1"
D20V2, continuous
D20V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 20(12Q15) CNV         10   34
  AMP PEAK 20(12Q15) WILD-TYPE   23   64
        clus
vv       AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE
  FEMALE                     10                           23
  MALE                       34                           64
D20V4, continuous
D20V5, continuous
D20V6, continuous
                              vv
clus                           M0 M1 MX
  AMP PEAK 20(12Q15) CNV       12  0  9
  AMP PEAK 20(12Q15) WILD-TYPE 22  2 35
D20V7, multiclass
    clus
vv   AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE
  M0                     12                           22
  M1                      0                            2
  MX                      9                           35
                              vv
clus                           N0 N1 N2 N3 NX
  AMP PEAK 20(12Q15) CNV       14  0  3  0  3
  AMP PEAK 20(12Q15) WILD-TYPE 31  9 11  3  5
D20V8, multiclass
D20V9, continuous
D20V10, continuous
                              vv
clus                           STAGE II STAGE III STAGE IV
  AMP PEAK 20(12Q15) CNV             11         7        2
  AMP PEAK 20(12Q15) WILD-TYPE       15        20       24
D20V11, multiclass
           clus
vv          AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE
  STAGE II                      11                           15
  STAGE III                      7                           20
  STAGE IV                       2                           24

Clustering(21) Variable = Amp Peak 21(13q34)
D21V1, survival
                              sevent
clus2                           0  1
  AMP PEAK 21(13Q34) CNV       34 12
  AMP PEAK 21(13Q34) WILD-TYPE 58 20
      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                          46                           78 
      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                          12                           20 
$`AMP PEAK 21(13Q34) CNV`
TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20W TCGA-BT-A2LD 
        6.74         6.58        19.46         8.61         8.35         3.65 
TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR 
        8.98         1.94         0.46         0.43        12.92         7.20 
TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A2HX TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IS 
        5.19         8.09         1.81         3.98        10.49        37.84 
TCGA-DK-A3IU TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3N5 
       11.51        36.43         8.32         6.87         4.01         8.94 
TCGA-FD-A3SJ TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-G2-A2EF 
       24.30         6.12         6.81        46.78        19.79        49.91 
TCGA-G2-A2EK TCGA-G2-A2EL TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC 
        5.65        26.93         1.32         4.50         1.38         2.50 
TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF 
        2.10         5.82         6.38         6.15         5.69         7.63 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-K4-A3WV 
        7.79         4.11         6.64         4.64 

$`AMP PEAK 21(13Q34) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N 
       12.79         7.33         2.66        11.93        19.00        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20X 
       12.16        17.85         5.06        14.89         5.06         8.25 
TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A3KJ 
        5.88         4.64         2.01         0.69         4.90         5.46 
TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB 
        2.53         2.14        31.40         8.98         7.04         8.91 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 
      118.88       100.47         7.17         5.85         6.64        10.59 
TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IN 
        7.76       123.85        75.32         2.20         7.82         8.22 
TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 
        5.52         9.67         8.28        10.55       131.15         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL 
        8.81         8.94        11.05         7.96        32.02        10.98 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
        5.49         4.54         1.94         7.89         6.84        15.16 
TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB 
        4.08         2.33        26.50        32.78        17.26         7.04 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RD TCGA-GC-A3YS 
       20.12         0.82         2.86         2.24         1.02         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW 
        7.69         3.12         7.56         3.22         4.37         6.41 
TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        6.38         5.33         1.51         6.71         8.71         3.42 

      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                        0.43                         0.10 
      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                       49.91                       131.15 
      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                        6.69                         7.25 
[1] "0.4 - 49.9 (6.7)"  "0.1 - 131.2 (7.2)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
[1] "hr=" "1.1"
D21V2, continuous
D21V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 21(13Q34) CNV         13   36
  AMP PEAK 21(13Q34) WILD-TYPE   20   62
        clus
vv       AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE
  FEMALE                     13                           20
  MALE                       36                           62
D21V4, continuous
D21V5, continuous
D21V6, continuous
                              vv
clus                           M0 M1 MX
  AMP PEAK 21(13Q34) CNV       15  1 19
  AMP PEAK 21(13Q34) WILD-TYPE 19  1 25
D21V7, multiclass
    clus
vv   AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE
  M0                     15                           19
  M1                      1                            1
  MX                     19                           25
                              vv
clus                           N0 N1 N2 N3 NX
  AMP PEAK 21(13Q34) CNV       19  4  8  2  2
  AMP PEAK 21(13Q34) WILD-TYPE 26  5  6  1  6
D21V8, multiclass
D21V9, continuous
D21V10, continuous
                              vv
clus                           STAGE II STAGE III STAGE IV
  AMP PEAK 21(13Q34) CNV             11         9       15
  AMP PEAK 21(13Q34) WILD-TYPE       15        18       11
D21V11, multiclass
           clus
vv          AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE
  STAGE II                      11                           15
  STAGE III                      9                           18
  STAGE IV                      15                           11

Clustering(22) Variable = Amp Peak 22(16p12.1)
D22V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 22(16P12.1) CNV       23 12
  AMP PEAK 22(16P12.1) WILD-TYPE 69 20
      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                            35                             89 
      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                            12                             20 
$`AMP PEAK 22(16P12.1) CNV`
TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A20R TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A2LA 
        2.66         6.58         5.06         5.06         8.25         5.88 
TCGA-C4-A0EZ TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1AC TCGA-DK-A2I1 TCGA-DK-A2I2 
        8.98        12.92         5.19       118.88        10.59         7.76 
TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IS TCGA-DK-A3IV TCGA-E5-A2PC 
        2.20         3.98         7.82        37.84         9.67        36.43 
TCGA-FD-A3B6 TCGA-FD-A3SJ TCGA-FD-A3SR TCGA-FD-A43U TCGA-FT-A3EE TCGA-G2-A2EF 
        6.87        24.30        19.79         6.84         2.33        49.91 
TCGA-G2-A2EO TCGA-G2-A3IE TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GU-A42P TCGA-GV-A3JV 
       32.78        20.12         2.86         2.24         6.38         4.37 
TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        6.41         5.69         6.71         8.71         3.42 

$`AMP PEAK 22(16P12.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N 
       12.79         7.33         6.74        11.93        19.00        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20W 
       12.16        17.85        19.46        14.89         8.61         8.35 
TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS 
        3.65         4.64         1.94         2.01         0.46         0.43 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 
        0.69         4.90         7.20         5.46         8.09         2.53 
TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD 
        2.14        31.40         8.98         7.04         8.91       100.47 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I4 TCGA-DK-A2I6 
        7.17         5.85         6.64         1.81       123.85        75.32 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX 
        8.22        10.49         5.52        11.51         8.28        10.55 
TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B7 
      131.15         0.10         8.81         8.32         8.94         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM 
       11.05         8.94         7.96        32.02        10.98         6.12 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SS TCGA-FD-A43N 
        6.81         5.49         4.54        46.78         1.94         7.89 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES 
       15.16         4.08        26.50         5.65        26.93        17.26 
TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD 
        7.04         0.82         1.32         4.50         1.38         1.02 
TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS 
        2.50         1.08         7.69         2.10         3.12         5.82 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JX TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI 
        7.56         3.22         6.15         7.63         7.79         4.11 
TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WV 
        6.64         6.38         5.33         1.51         4.64 

      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                           2.2                            0.1 
      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                        118.88                         131.15 
      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                          6.84                           7.04 
[1] "2.2 - 118.9 (6.8)" "0.1 - 131.2 (7.0)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
[1] "hr=" "1.2"
D22V2, continuous
D22V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 22(16P12.1) CNV          9   26
  AMP PEAK 22(16P12.1) WILD-TYPE   24   72
        clus
vv       AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE
  FEMALE                        9                             24
  MALE                         26                             72
D22V4, continuous
D22V5, continuous
D22V6, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 22(16P12.1) CNV        9  0 12
  AMP PEAK 22(16P12.1) WILD-TYPE 25  2 32
D22V7, multiclass
    clus
vv   AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE
  M0                        9                             25
  M1                        0                              2
  MX                       12                             32
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 22(16P12.1) CNV        8  4  5  1  3
  AMP PEAK 22(16P12.1) WILD-TYPE 37  5  9  2  5
D22V8, multiclass
D22V9, continuous
D22V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  AMP PEAK 22(16P12.1) CNV              6         4       10
  AMP PEAK 22(16P12.1) WILD-TYPE       20        23       16
D22V11, multiclass
           clus
vv          AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE
  STAGE II                         6                             20
  STAGE III                        4                             23
  STAGE IV                        10                             16

Clustering(23) Variable = Amp Peak 23(17q11.2)
D23V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 23(17Q11.2) CNV       41 17
  AMP PEAK 23(17Q11.2) WILD-TYPE 51 15
      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                            58                             66 
      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                            17                             15 
$`AMP PEAK 23(17Q11.2) CNV`
TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
        2.66         6.74         6.58        17.85        19.46         5.06 
TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20W TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
       14.89         8.61         8.35         3.65         4.64         8.98 
TCGA-CF-A1HR TCGA-CU-A0YR TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 
        0.46         7.20         8.09         2.14        31.40         8.98 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A3IK TCGA-DK-A3IM 
      118.88       100.47        10.59         7.76         2.20         7.82 
TCGA-DK-A3IS TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3NA 
       37.84        36.43         8.94         6.87         8.94        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
       24.30         4.54        46.78         7.89         6.84        15.16 
TCGA-FT-A3EE TCGA-G2-A2EO TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3RB TCGA-GC-A3YS 
        2.33        32.78        20.12         0.82         4.50         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW 
        7.69         2.10         6.38         3.22         4.37         6.41 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E 
        5.69         7.63         7.79         4.11         6.64         6.38 
TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WU TCGA-K4-A3WV 
        5.33         6.71         3.42         4.64 

$`AMP PEAK 23(17Q11.2) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O 
       12.79         7.33        11.93        19.00        26.10        12.16 
TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A2LA TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HS 
        5.06         8.25         5.88         1.94         2.01         0.43 
TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 
        0.69        12.92         4.90         5.46         5.19         2.53 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX 
        7.04         8.91         7.17         5.85         6.64         1.81 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT 
      123.85        75.32         3.98         8.22        10.49         5.52 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 
       11.51         9.67         8.28        10.55       131.15         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3SL 
        8.81         8.32         4.01        11.05         7.96        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FJ-A3ZF 
        6.12         6.81         5.49        19.79         1.94         4.08 
TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES TCGA-G2-A3IB 
       49.91        26.50         5.65        26.93        17.26         7.04 
TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC 
        2.86         2.24         1.32         1.38         1.02         2.50 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GV-A3JX TCGA-H4-A2HO TCGA-K4-A3WS 
        3.12         5.82         7.56         6.15         1.51         8.71 

      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                          0.46                           0.10 
      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                        118.88                         131.15 
      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                         7.035                          6.925 
[1] "0.5 - 118.9 (7.0)" "0.1 - 131.2 (6.9)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
[1] "hr=" "1.1"
D23V2, continuous
D23V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 23(17Q11.2) CNV         15   47
  AMP PEAK 23(17Q11.2) WILD-TYPE   18   51
        clus
vv       AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE
  FEMALE                       15                             18
  MALE                         47                             51
D23V4, continuous
D23V5, continuous
D23V6, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 23(17Q11.2) CNV       12  0 28
  AMP PEAK 23(17Q11.2) WILD-TYPE 22  2 16
D23V7, multiclass
    clus
vv   AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE
  M0                       12                             22
  M1                        0                              2
  MX                       28                             16
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 23(17Q11.2) CNV       18  6 10  1  4
  AMP PEAK 23(17Q11.2) WILD-TYPE 27  3  4  2  4
D23V8, multiclass
D23V9, continuous
D23V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  AMP PEAK 23(17Q11.2) CNV             14         9       16
  AMP PEAK 23(17Q11.2) WILD-TYPE       12        18       10
D23V11, multiclass
           clus
vv          AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE
  STAGE II                        14                             12
  STAGE III                        9                             18
  STAGE IV                        16                             10

Clustering(24) Variable = Amp Peak 24(17q12)
D24V1, survival
                              sevent
clus2                           0  1
  AMP PEAK 24(17Q12) CNV       34 18
  AMP PEAK 24(17Q12) WILD-TYPE 58 14
      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                          52                           72 
      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                          18                           14 
$`AMP PEAK 24(17Q12) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20O TCGA-BT-A20P 
       12.79         2.66         6.74         6.58        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LD 
       19.46         5.06         8.61         8.35         8.25         3.65 
TCGA-C4-A0EZ TCGA-CF-A1HR TCGA-CU-A0YR TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 
        8.98         0.46         7.20         8.09         2.14        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AD TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IM 
        8.98       100.47        10.59         7.76        75.32         7.82 
TCGA-DK-A3IS TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3NA 
       37.84        36.43         8.94         6.87         4.01        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FT-A3EE 
       24.30         4.54        46.78         6.84        15.16         2.33 
TCGA-G2-A3IE TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JZ 
       20.12         2.10         6.38         3.22         4.37         5.69 
TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G 
        7.63         7.79         4.11         6.64         6.38         5.33 
TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WU TCGA-K4-A3WV 
        1.51         6.71         3.42         4.64 

$`AMP PEAK 24(17Q12) WILD-TYPE`
TCGA-BL-A13I TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20T TCGA-BT-A20V 
        7.33        11.93        19.00        26.10        14.89         5.06 
TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CF-A27C 
        5.88         4.64         1.94         2.01         0.43         0.69 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1AA 
       12.92         4.90         5.46         5.19         2.53         7.04 
TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX 
        8.91       118.88         7.17         5.85         6.64         1.81 
TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT 
      123.85         2.20         3.98         8.22        10.49         5.52 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 
       11.51         9.67         8.28        10.55       131.15         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SL 
        8.81         8.32        11.05         8.94         7.96        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N 
        6.12         6.81         5.49        19.79         1.94         7.89 
TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO 
        4.08        49.91        26.50         5.65        26.93        32.78 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO 
       17.26         7.04         0.82         2.86         2.24         1.32 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 
        4.50         1.38         1.02         2.50         1.08         7.69 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GV-A3JW TCGA-GV-A3JX TCGA-K4-A3WS 
        3.12         5.82         7.56         6.41         6.15         8.71 

      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                        0.46                         0.10 
      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                      100.47                       131.15 
      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                       7.415                        6.725 
[1] "0.5 - 100.5 (7.4)" "0.1 - 131.2 (6.7)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
[1] "hr=" "1.5"
D24V2, continuous
D24V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 24(17Q12) CNV         14   42
  AMP PEAK 24(17Q12) WILD-TYPE   19   56
        clus
vv       AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE
  FEMALE                     14                           19
  MALE                       42                           56
D24V4, continuous
D24V5, continuous
D24V6, continuous
                              vv
clus                           M0 M1 MX
  AMP PEAK 24(17Q12) CNV       10  0 24
  AMP PEAK 24(17Q12) WILD-TYPE 24  2 20
D24V7, multiclass
    clus
vv   AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE
  M0                     10                           24
  M1                      0                            2
  MX                     24                           20
                              vv
clus                           N0 N1 N2 N3 NX
  AMP PEAK 24(17Q12) CNV       16  5  8  1  3
  AMP PEAK 24(17Q12) WILD-TYPE 29  4  6  2  5
D24V8, multiclass
D24V9, continuous
D24V10, continuous
                              vv
clus                           STAGE II STAGE III STAGE IV
  AMP PEAK 24(17Q12) CNV             11         8       13
  AMP PEAK 24(17Q12) WILD-TYPE       15        19       13
D24V11, multiclass
           clus
vv          AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE
  STAGE II                      11                           15
  STAGE III                      8                           19
  STAGE IV                      13                           13

Clustering(25) Variable = Amp Peak 25(19q12)
D25V1, survival
                              sevent
clus2                           0  1
  AMP PEAK 25(19Q12) CNV       43 12
  AMP PEAK 25(19Q12) WILD-TYPE 49 20
      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                          55                           69 
      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                          12                           20 
$`AMP PEAK 25(19Q12) CNV`
TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20V 
        2.66         6.74        19.00        26.10        12.16         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0F0 TCGA-C4-A0F6 
        8.35         8.25         5.88         3.65         1.94         2.01 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 
        0.43        12.92         5.46         8.09         2.53        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I4 TCGA-DK-A2I6 
        8.98         8.91       100.47         1.81       123.85        75.32 
TCGA-DK-A3IL TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B8 TCGA-FD-A3SJ TCGA-FD-A3SL 
        3.98        36.43         8.81        11.05        24.30        10.98 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
       19.79         1.94         7.89         6.84        15.16         4.08 
TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EO TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3RB 
        2.33        49.91        32.78        20.12         0.82         4.50 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GU-A42R TCGA-GV-A3JV 
        1.38         1.02         1.08         7.69         3.22         4.37 
TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A40G TCGA-H4-A2HQ 
        6.41         5.69         7.63         7.79         5.33         6.71 
TCGA-K4-A3WS 
        8.71 

$`AMP PEAK 25(19Q12) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20P TCGA-BT-A20Q 
       12.79         7.33         6.58        11.93        17.85        19.46 
TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-CF-A1HR 
        5.06        14.89         8.61         4.64         8.98         0.46 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1AA 
        0.69         4.90         7.20         5.19         2.14         7.04 
TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A2I2 
      118.88         7.17         5.85         6.64        10.59         7.76 
TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT 
        2.20         7.82         8.22        10.49        37.84         5.52 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 
       11.51         9.67         8.28        10.55       131.15         0.10 
TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3N5 TCGA-FD-A3N6 
        8.32         8.94         6.87         4.01         8.94         7.96 
TCGA-FD-A3NA TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ 
       32.02         6.12         6.81         5.49         4.54        46.78 
TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3BM 
       26.50         5.65        26.93        17.26         7.04         2.86 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3WC TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS 
        2.24         1.32         2.50         2.10         3.12         5.82 
TCGA-GU-A42P TCGA-GU-A42Q TCGA-GV-A3JX TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E 
        6.38         7.56         6.15         4.11         6.64         6.38 
TCGA-H4-A2HO TCGA-K4-A3WU TCGA-K4-A3WV 
        1.51         3.42         4.64 

      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                        0.43                         0.10 
      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                      123.85                       131.15 
      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                        7.63                         6.87 
[1] "0.4 - 123.8 (7.6)" "0.1 - 131.2 (6.9)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
[1] "hr=" "1.7"
D25V2, continuous
D25V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 25(19Q12) CNV         14   44
  AMP PEAK 25(19Q12) WILD-TYPE   19   54
        clus
vv       AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE
  FEMALE                     14                           19
  MALE                       44                           54
D25V4, continuous
D25V5, continuous
D25V6, continuous
                              vv
clus                           M0 M1 MX
  AMP PEAK 25(19Q12) CNV       12  1 21
  AMP PEAK 25(19Q12) WILD-TYPE 22  1 23
D25V7, multiclass
    clus
vv   AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE
  M0                     12                           22
  M1                      1                            1
  MX                     21                           23
                              vv
clus                           N0 N1 N2 N3 NX
  AMP PEAK 25(19Q12) CNV       16  4  8  2  3
  AMP PEAK 25(19Q12) WILD-TYPE 29  5  6  1  5
D25V8, multiclass
D25V9, continuous
D25V10, continuous
                              vv
clus                           STAGE II STAGE III STAGE IV
  AMP PEAK 25(19Q12) CNV              9        12       13
  AMP PEAK 25(19Q12) WILD-TYPE       17        15       13
D25V11, multiclass
           clus
vv          AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE
  STAGE II                       9                           17
  STAGE III                     12                           15
  STAGE IV                      13                           13

Clustering(26) Variable = Amp Peak 26(19q13.43)
D26V1, survival
                                 sevent
clus2                              0  1
  AMP PEAK 26(19Q13.43) CNV       44  9
  AMP PEAK 26(19Q13.43) WILD-TYPE 48 23
      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                             53                              71 
      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                              9                              23 
$`AMP PEAK 26(19Q13.43) CNV`
TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20V TCGA-BT-A20X 
        2.66         6.74        19.00        26.10         5.06         8.25 
TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CU-A0YR 
        3.65         8.98         1.94         2.01         0.43         7.20 
TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AB 
        5.46         8.09         2.53        31.40         8.98         8.91 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM 
      118.88       100.47       123.85         2.20         3.98         7.82 
TCGA-DK-A3IV TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3SL TCGA-FD-A3SS TCGA-FD-A43N 
        9.67        36.43         8.81        10.98         1.94         7.89 
TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EO TCGA-G2-A3IE 
        6.84        15.16         2.33        49.91        32.78        20.12 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GD-A3OS 
        1.38         1.02         1.08         7.69         3.12         5.82 
TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH 
        3.22         4.37         6.41         5.69         7.63         7.79 
TCGA-GV-A3QI TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WU 
        4.11         5.33         1.51         6.71         3.42 

$`AMP PEAK 26(19Q13.43) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P 
       12.79         7.33         6.58        11.93        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20W TCGA-BT-A2LA 
       19.46         5.06        14.89         8.61         8.35         5.88 
TCGA-BT-A3PH TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3QU 
        4.64         0.46         0.69        12.92         4.90         5.19 
TCGA-DK-A1A5 TCGA-DK-A1AA TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX 
        2.14         7.04         7.17         5.85         6.64         1.81 
TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS 
       10.59         7.76        75.32         8.22        10.49        37.84 
TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 
        5.52        11.51         8.28        10.55       131.15         0.10 
TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 
        8.32         8.94         6.87         4.01        11.05         8.94 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO 
        7.96        32.02        24.30         6.12         6.81         5.49 
TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FJ-A3ZF TCGA-G2-A2EJ TCGA-G2-A2EK 
        4.54        46.78        19.79         4.08        26.50         5.65 
TCGA-G2-A2EL TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 
       26.93        17.26         7.04         0.82         2.86         2.24 
TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3WC TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42Q 
        1.32         4.50         2.50         2.10         6.38         7.56 
TCGA-GV-A3JX TCGA-GV-A3QK TCGA-GV-A40E TCGA-K4-A3WS TCGA-K4-A3WV 
        6.15         6.64         6.38         8.71         4.64 

      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                           0.43                            0.10 
      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                         123.85                          131.15 
      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                           6.74                            7.04 
[1] "0.4 - 123.8 (6.7)" "0.1 - 131.2 (7.0)"
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
[1] "hr=" "1.9"
D26V2, continuous
D26V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 26(19Q13.43) CNV         15   41
  AMP PEAK 26(19Q13.43) WILD-TYPE   18   57
        clus
vv       AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE
  FEMALE                        15                              18
  MALE                          41                              57
D26V4, continuous
D26V5, continuous
D26V6, continuous
                                 vv
clus                              M0 M1 MX
  AMP PEAK 26(19Q13.43) CNV       13  1 21
  AMP PEAK 26(19Q13.43) WILD-TYPE 21  1 23
D26V7, multiclass
    clus
vv   AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE
  M0                        13                              21
  M1                         1                               1
  MX                        21                              23
                                 vv
clus                              N0 N1 N2 N3 NX
  AMP PEAK 26(19Q13.43) CNV       15  5  7  2  5
  AMP PEAK 26(19Q13.43) WILD-TYPE 30  4  7  1  3
D26V8, multiclass
D26V9, continuous
D26V10, continuous
                                 vv
clus                              STAGE II STAGE III STAGE IV
  AMP PEAK 26(19Q13.43) CNV              9        11       13
  AMP PEAK 26(19Q13.43) WILD-TYPE       17        16       13
D26V11, multiclass
           clus
vv          AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE
  STAGE II                          9                              17
  STAGE III                        11                              16
  STAGE IV                         13                              13

Clustering(27) Variable = Amp Peak 27(20q11.21)
D27V1, survival
                                 sevent
clus2                              0  1
  AMP PEAK 27(20Q11.21) CNV       63 24
  AMP PEAK 27(20Q11.21) WILD-TYPE 29  8
      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                             87                              37 
      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                             24                               8 
$`AMP PEAK 27(20Q11.21) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20N 
       12.79         2.66         6.74         6.58        19.00        26.10 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W 
       17.85        19.46         5.06        14.89         5.06         8.35 
TCGA-BT-A20X TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR 
        8.25         3.65         8.98         1.94         2.01         0.46 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-DK-A1A5 
        0.43        12.92         4.90         7.20         5.46         2.14 
TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I1 
       31.40         8.98       118.88       100.47         1.81        10.59 
TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM 
        7.76       123.85        75.32         2.20         3.98         7.82 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WX 
        8.22        10.49        37.84        11.51         9.67        10.55 
TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3N5 TCGA-FD-A3NA 
       36.43         8.81         6.87         4.01         8.94        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS 
       24.30        10.98         4.54        46.78        19.79         1.94 
TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK 
        7.89        15.16         2.33        49.91        26.50         5.65 
TCGA-G2-A2EO TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB 
       32.78         0.82         2.86         2.24         1.32         4.50 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OS 
        1.38         1.02         1.08         7.69         2.10         5.82 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ 
        7.56         3.22         4.37         6.41         6.15         5.69 
TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ 
        7.63         7.79         4.11         6.38         5.33         6.71 
TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        8.71         3.42         4.64 

$`AMP PEAK 27(20Q11.21) WILD-TYPE`
TCGA-BL-A13I TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20U TCGA-BT-A2LA TCGA-BT-A3PH 
        7.33        11.93        12.16         8.61         5.88         4.64 
TCGA-CF-A27C TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1AA TCGA-DK-A1AB 
        0.69         5.19         8.09         2.53         7.04         8.91 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A3IT TCGA-DK-A3WW TCGA-DK-A3WY 
        7.17         5.85         6.64         5.52         8.28       131.15 
TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3SM 
        0.10         8.32         8.94        11.05         7.96         6.12 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A43U TCGA-FJ-A3ZF TCGA-G2-A2EL TCGA-G2-A2ES 
        6.81         5.49         6.84         4.08        26.93        17.26 
TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3WC TCGA-GD-A3OQ TCGA-GU-A42P TCGA-GV-A3QK 
        7.04        20.12         2.50         3.12         6.38         6.64 
TCGA-H4-A2HO 
        1.51 

      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                           0.43                            0.10 
      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                         123.85                          131.15 
      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                           7.20                            6.84 
[1] "0.4 - 123.8 (7.2)" "0.1 - 131.2 (6.8)"
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
[1] "hr=" "1.1"
D27V2, continuous
D27V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 27(20Q11.21) CNV         23   69
  AMP PEAK 27(20Q11.21) WILD-TYPE   10   29
        clus
vv       AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE
  FEMALE                        23                              10
  MALE                          69                              29
D27V4, continuous
D27V5, continuous
D27V6, continuous
                                 vv
clus                              M0 M1 MX
  AMP PEAK 27(20Q11.21) CNV       23  1 32
  AMP PEAK 27(20Q11.21) WILD-TYPE 11  1 12
D27V7, multiclass
    clus
vv   AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE
  M0                        23                              11
  M1                         1                               1
  MX                        32                              12
                                 vv
clus                              N0 N1 N2 N3 NX
  AMP PEAK 27(20Q11.21) CNV       33  4 10  3  5
  AMP PEAK 27(20Q11.21) WILD-TYPE 12  5  4  0  3
D27V8, multiclass
D27V9, continuous
D27V10, continuous
                                 vv
clus                              STAGE II STAGE III STAGE IV
  AMP PEAK 27(20Q11.21) CNV             19        20       16
  AMP PEAK 27(20Q11.21) WILD-TYPE        7         7       10
D27V11, multiclass
           clus
vv          AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE
  STAGE II                         19                               7
  STAGE III                        20                               7
  STAGE IV                         16                              10

Clustering(28) Variable = Amp Peak 28(22q11.23)
D28V1, survival
                                 sevent
clus2                              0  1
  AMP PEAK 28(22Q11.23) CNV       24  6
  AMP PEAK 28(22Q11.23) WILD-TYPE 68 26
      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                             30                              94 
      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                              6                              26 
$`AMP PEAK 28(22Q11.23) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BT-A20W TCGA-C4-A0F6 TCGA-CU-A0YR TCGA-DK-A1A6 
       12.79         2.66         8.35         2.01         7.20        31.40 
TCGA-DK-A1AD TCGA-DK-A2I6 TCGA-DK-A3IN TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3WX 
      100.47        75.32         8.22        37.84        11.51        10.55 
TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3SL TCGA-FD-A3SN TCGA-G2-A2EF TCGA-G2-A2EO 
        6.87         4.01        10.98         6.81        49.91        32.78 
TCGA-G2-A2ES TCGA-G2-A3IE TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RD TCGA-GD-A2C5 
       17.26        20.12         2.24         1.32         1.02         7.69 
TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E 
        4.37         5.69         7.79         4.11         6.64         6.38 

$`AMP PEAK 28(22Q11.23) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N 
        7.33         6.74         6.58        11.93        19.00        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U 
       12.16        17.85        19.46         5.06        14.89         8.61 
TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
        5.06         8.25         5.88         3.65         4.64         8.98 
TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO 
        1.94         0.46         0.43         0.69        12.92         4.90 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A7 
        5.46         5.19         8.09         2.53         2.14         8.98 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG 
        7.04         8.91       118.88         7.17         5.85         6.64 
TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IL 
        1.81        10.59         7.76       123.85         2.20         3.98 
TCGA-DK-A3IM TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY 
        7.82        10.49         5.52         9.67         8.28       131.15 
TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B8 
       36.43         0.10         8.81         8.32         8.94        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SM TCGA-FD-A3SO 
        8.94         7.96        32.02        24.30         6.12         5.49 
TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U 
        4.54        46.78        19.79         1.94         7.89         6.84 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
       15.16         4.08         2.33        26.50         5.65        26.93 
TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC 
        7.04         0.82         2.86         4.50         1.38         2.50 
TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q 
        1.08         2.10         3.12         5.82         6.38         7.56 
TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3QF TCGA-GV-A40G TCGA-H4-A2HO 
        3.22         6.41         6.15         7.63         5.33         1.51 
TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        6.71         8.71         3.42         4.64 

      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                           1.02                            0.10 
      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                         100.47                          131.15 
      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                          7.740                           6.725 
[1] "1.0 - 100.5 (7.7)" "0.1 - 131.2 (6.7)"
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
[1] "hr=" "2"  
D28V2, continuous
D28V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 28(22Q11.23) CNV          5   27
  AMP PEAK 28(22Q11.23) WILD-TYPE   28   71
        clus
vv       AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE
  FEMALE                         5                              28
  MALE                          27                              71
D28V4, continuous
D28V5, continuous
D28V6, continuous
                                 vv
clus                              M0 M1 MX
  AMP PEAK 28(22Q11.23) CNV        9  1 10
  AMP PEAK 28(22Q11.23) WILD-TYPE 25  1 34
D28V7, multiclass
    clus
vv   AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE
  M0                         9                              25
  M1                         1                               1
  MX                        10                              34
                                 vv
clus                              N0 N1 N2 N3 NX
  AMP PEAK 28(22Q11.23) CNV       12  1  3  1  3
  AMP PEAK 28(22Q11.23) WILD-TYPE 33  8 11  2  5
D28V8, multiclass
D28V9, continuous
D28V10, continuous
                                 vv
clus                              STAGE II STAGE III STAGE IV
  AMP PEAK 28(22Q11.23) CNV              7         7        5
  AMP PEAK 28(22Q11.23) WILD-TYPE       19        20       21
D28V11, multiclass
           clus
vv          AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE
  STAGE II                          7                              19
  STAGE III                         7                              20
  STAGE IV                          5                              21

Clustering(29) Variable = Del Peak  1(1p36.11)
D29V1, survival
                                sevent
clus2                             0  1
  DEL PEAK  1(1P36.11) CNV       13  8
  DEL PEAK  1(1P36.11) WILD-TYPE 79 24
      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                            21                            103 
      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                             8                             24 
$`DEL PEAK  1(1P36.11) CNV`
TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20T TCGA-BT-A2LD TCGA-CF-A1HR TCGA-CF-A1HS 
        6.58        19.00        14.89         3.65         0.46         0.43 
TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-DK-A1AE TCGA-DK-A2I2 TCGA-DK-A3IQ TCGA-DK-A3IT 
        7.20         5.46         7.17         7.76        10.49         5.52 
TCGA-DK-A3WX TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3SO TCGA-G2-A2EL TCGA-GV-A3JV 
       10.55        36.43         8.94         5.49        26.93         4.37 
TCGA-GV-A3QI TCGA-K4-A3WS TCGA-K4-A3WV 
        4.11         8.71         4.64 

$`DEL PEAK  1(1P36.11) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20N 
       12.79         7.33         2.66         6.74        11.93        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20V 
       12.16        17.85        19.46         5.06         8.61         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 
        8.35         8.25         5.88         4.64         8.98         1.94 
TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3QU TCGA-CU-A3YL 
        2.01         0.69        12.92         4.90         5.19         8.09 
TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB 
        2.53         2.14        31.40         8.98         7.04         8.91 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 
      118.88       100.47         5.85         6.64         1.81        10.59 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN 
      123.85        75.32         2.20         3.98         7.82         8.22 
TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 
       37.84        11.51         9.67         8.28       131.15         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 
        8.81         8.32         6.87         4.01        11.05         8.94 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
        7.96        32.02        24.30        10.98         6.12         6.81 
TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U 
        4.54        46.78        19.79         1.94         7.89         6.84 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK 
       15.16         4.08         2.33        49.91        26.50         5.65 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM 
       32.78        17.26         7.04        20.12         0.82         2.86 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC 
        2.24         1.32         4.50         1.38         1.02         2.50 
TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P 
        1.08         7.69         2.10         3.12         5.82         6.38 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF 
        7.56         3.22         6.41         6.15         5.69         7.63 
TCGA-GV-A3QH TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ 
        7.79         6.64         6.38         5.33         1.51         6.71 
TCGA-K4-A3WU 
        3.42 

      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                         36.43                         131.15 
      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                          7.17                           6.87 
[1] "0.4 - 36.4 (7.2)"  "0.1 - 131.2 (6.9)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK  1(1P36.11) CNV"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK  1(1P36.11) CNV"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK  1(1P36.11) CNV"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
[1] "hr=" "1.8"
D29V2, continuous
D29V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  1(1P36.11) CNV          6   17
  DEL PEAK  1(1P36.11) WILD-TYPE   27   81
        clus
vv       DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE
  FEMALE                        6                             27
  MALE                         17                             81
D29V4, continuous
D29V5, continuous
D29V6, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK  1(1P36.11) CNV        6  0  8
  DEL PEAK  1(1P36.11) WILD-TYPE 28  2 36
D29V7, multiclass
    clus
vv   DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE
  M0                        6                             28
  M1                        0                              2
  MX                        8                             36
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK  1(1P36.11) CNV        8  5  0  1  0
  DEL PEAK  1(1P36.11) WILD-TYPE 37  4 14  2  8
D29V8, multiclass
D29V9, continuous
D29V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  DEL PEAK  1(1P36.11) CNV              2         6        6
  DEL PEAK  1(1P36.11) WILD-TYPE       24        21       20
D29V11, multiclass
           clus
vv          DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE
  STAGE II                         2                             24
  STAGE III                        6                             21
  STAGE IV                         6                             20

Clustering(30) Variable = Del Peak  2(1q32.1)
D30V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  2(1Q32.1) CNV       19  6
  DEL PEAK  2(1Q32.1) WILD-TYPE 73 26
      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                           25                            99 
      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                            6                            26 
$`DEL PEAK  2(1Q32.1) CNV`
TCGA-BT-A20N TCGA-BT-A20T TCGA-BT-A20W TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YO 
       26.10        14.89         8.35         0.46         0.43         4.90 
TCGA-CU-A3YL TCGA-DK-A2HX TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IQ 
        8.09         1.81        75.32         2.20         7.82        10.49 
TCGA-DK-A3IS TCGA-FD-A3SL TCGA-FD-A3SR TCGA-FJ-A3Z7 TCGA-G2-A2EK TCGA-G2-A3IE 
       37.84        10.98        19.79        15.16         5.65        20.12 
TCGA-G2-A3VY TCGA-GC-A3RC TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QH TCGA-GV-A40E 
        0.82         1.38         6.41         5.69         7.79         6.38 
TCGA-K4-A3WU 
        3.42 

$`DEL PEAK  2(1Q32.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U 
       19.00        12.16        17.85        19.46         5.06         8.61 
TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
        5.06         8.25         5.88         3.65         4.64         8.98 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3KJ 
        1.94         2.01         0.69        12.92         7.20         5.46 
TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA 
        5.19         2.53         2.14        31.40         8.98         7.04 
TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG 
        8.91       118.88       100.47         7.17         5.85         6.64 
TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IT 
       10.59         7.76       123.85         3.98         8.22         5.52 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC 
       11.51         9.67         8.28        10.55       131.15        36.43 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 
        0.10         8.81         8.32         8.94         6.87         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SM 
       11.05         8.94         7.96        32.02        24.30         6.12 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SS TCGA-FD-A43N 
        6.81         5.49         4.54        46.78         1.94         7.89 
TCGA-FD-A43U TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EL 
        6.84         4.08         2.33        49.91        26.50        26.93 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO 
       32.78        17.26         7.04         2.86         2.24         1.32 
TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP 
        4.50         1.02         2.50         1.08         7.69         2.10 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV 
        3.12         5.82         6.38         7.56         3.22         4.37 
TCGA-GV-A3JX TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40G TCGA-H4-A2HO 
        6.15         7.63         4.11         6.64         5.33         1.51 
TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WV 
        6.71         8.71         4.64 

      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                        75.32                        131.15 
      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                         7.79                          6.87 
[1] "0.4 - 75.3 (7.8)"  "0.1 - 131.2 (6.9)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  2(1Q32.1) CNV"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK  2(1Q32.1) CNV"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  2(1Q32.1) CNV"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK  2(1Q32.1) CNV"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  2(1Q32.1) CNV"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK  2(1Q32.1) CNV"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
[1] "hr=" "1.2"
D30V2, continuous
D30V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  2(1Q32.1) CNV          2   23
  DEL PEAK  2(1Q32.1) WILD-TYPE   31   75
        clus
vv       DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE
  FEMALE                       2                            31
  MALE                        23                            75
D30V4, continuous
D30V5, continuous
D30V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK  2(1Q32.1) CNV        6  1  8
  DEL PEAK  2(1Q32.1) WILD-TYPE 28  1 36
D30V7, multiclass
    clus
vv   DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE
  M0                       6                            28
  M1                       1                             1
  MX                       8                            36
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK  2(1Q32.1) CNV        6  0  4  1  4
  DEL PEAK  2(1Q32.1) WILD-TYPE 39  9 10  2  4
D30V8, multiclass
D30V9, continuous
D30V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK  2(1Q32.1) CNV              7         3        5
  DEL PEAK  2(1Q32.1) WILD-TYPE       19        24       21
D30V11, multiclass
           clus
vv          DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE
  STAGE II                        7                            19
  STAGE III                       3                            24
  STAGE IV                        5                            21

Clustering(31) Variable = Del Peak  3(2q22.1)
D31V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  3(2Q22.1) CNV       25 13
  DEL PEAK  3(2Q22.1) WILD-TYPE 67 19
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                           38                            86 
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                           13                            19 
$`DEL PEAK  3(2Q22.1) CNV`
TCGA-BL-A13I TCGA-BT-A20P TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LA 
        7.33        17.85        14.89         5.06         8.35         5.88 
TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F6 TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-CU-A3QU 
        4.64         8.98         2.01        12.92         5.46         5.19 
TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A3IK TCGA-DK-A3IS 
        2.53         8.98         1.81        10.59         2.20        37.84 
TCGA-DK-A3IV TCGA-FD-A3B5 TCGA-FD-A3N6 TCGA-FD-A3SJ TCGA-FD-A3SR TCGA-FJ-A3ZF 
        9.67         8.94         7.96        24.30        19.79         4.08 
TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RD 
       49.91        26.50        26.93         0.82         2.86         1.02 
TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JZ 
        2.10         5.82         7.56         4.37         6.41         5.69 
TCGA-GV-A3QK TCGA-K4-A3WU 
        6.64         3.42 

$`DEL PEAK  3(2Q22.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         2.66         6.74         6.58        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20X 
       26.10        12.16        19.46         5.06         8.61         8.25 
TCGA-BT-A2LD TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YO 
        3.65         1.94         0.46         0.43         0.69         4.90 
TCGA-CU-A0YR TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB 
        7.20         8.09         2.14        31.40         7.04         8.91 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I2 
      118.88       100.47         7.17         5.85         6.64         7.76 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ 
      123.85        75.32         3.98         7.82         8.22        10.49 
TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC 
        5.52        11.51         8.28        10.55       131.15        36.43 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        0.10         8.81         8.32         6.87         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO 
        8.94        32.02        10.98         6.12         6.81         5.49 
TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
        4.54        46.78         1.94         7.89         6.84        15.16 
TCGA-FT-A3EE TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE 
        2.33         5.65        32.78        17.26         7.04        20.12 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GC-A3YS 
        2.24         1.32         4.50         1.38         2.50         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JX TCGA-GV-A3QF 
        7.69         3.12         6.38         3.22         6.15         7.63 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ 
        7.79         4.11         6.38         5.33         1.51         6.71 
TCGA-K4-A3WS TCGA-K4-A3WV 
        8.71         4.64 

      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                         0.82                          0.10 
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                        49.91                        131.15 
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                        6.525                         7.040 
[1] "0.8 - 49.9 (6.5)"  "0.1 - 131.2 (7.0)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
[1] "hr=" "1.6"
D31V2, continuous
D31V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  3(2Q22.1) CNV         14   26
  DEL PEAK  3(2Q22.1) WILD-TYPE   19   72
        clus
vv       DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE
  FEMALE                      14                            19
  MALE                        26                            72
D31V4, continuous
D31V5, continuous
D31V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK  3(2Q22.1) CNV       12  0 11
  DEL PEAK  3(2Q22.1) WILD-TYPE 22  2 33
D31V7, multiclass
    clus
vv   DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE
  M0                      12                            22
  M1                       0                             2
  MX                      11                            33
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK  3(2Q22.1) CNV       10  3  6  1  3
  DEL PEAK  3(2Q22.1) WILD-TYPE 35  6  8  2  5
D31V8, multiclass
D31V9, continuous
D31V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK  3(2Q22.1) CNV              8         5       10
  DEL PEAK  3(2Q22.1) WILD-TYPE       18        22       16
D31V11, multiclass
           clus
vv          DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE
  STAGE II                        8                            18
  STAGE III                       5                            22
  STAGE IV                       10                            16

Clustering(32) Variable = Del Peak  4(2q34)
D32V1, survival
                             sevent
clus2                          0  1
  DEL PEAK  4(2Q34) CNV       36 15
  DEL PEAK  4(2Q34) WILD-TYPE 56 17
      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                         51                          73 
      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                         15                          17 
$`DEL PEAK  4(2Q34) CNV`
TCGA-BL-A13J TCGA-BT-A20N TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X 
        2.66        26.10        14.89         5.06         8.35         8.25 
TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A3KJ 
        5.88         4.64         8.98         0.43        12.92         5.46 
TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX 
        5.19         8.09         2.14       118.88       100.47         1.81 
TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IS 
       10.59         7.76         2.20         3.98         7.82        37.84 
TCGA-DK-A3IT TCGA-DK-A3IV TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3N5 TCGA-FD-A3SN 
        5.52         9.67         8.32         8.94         8.94         6.81 
TCGA-FD-A3SR TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A3VY 
       19.79         4.08        49.91         5.65        26.93         0.82 
TCGA-GC-A3BM TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GU-A42P 
        2.86         1.02         2.50         1.08         2.10         6.38 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40G 
        4.37         6.41         7.79         4.11         6.64         5.33 
TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        8.71         3.42         4.64 

$`DEL PEAK  4(2Q34) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         6.74         6.58        11.93        19.00 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A2LD 
       12.16        17.85        19.46         5.06         8.61         3.65 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR 
        1.94         2.01         0.46         0.69         4.90         7.20 
TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE 
        2.53        31.40         8.98         7.04         8.91         7.17 
TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IN TCGA-DK-A3IQ 
        5.85         6.64       123.85        75.32         8.22        10.49 
TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 
       11.51         8.28        10.55       131.15        36.43         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA 
        8.81         6.87         4.01        11.05         7.96        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ 
       24.30        10.98         6.12         5.49         4.54        46.78 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EJ 
        1.94         7.89         6.84        15.16         2.33        26.50 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3I6 TCGA-GC-A3OO 
       32.78        17.26         7.04        20.12         2.24         1.32 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q 
        4.50         1.38         7.69         3.12         5.82         7.56 
TCGA-GU-A42R TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A40E TCGA-H4-A2HO 
        3.22         6.15         5.69         7.63         6.38         1.51 
TCGA-H4-A2HQ 
        6.71 

      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                       0.43                        0.10 
      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                     118.88                      131.15 
      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                       6.38                        7.20 
[1] "0.4 - 118.9 (6.4)" "0.1 - 131.2 (7.2)"
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
[1] "hr=" "1.5"
D32V2, continuous
D32V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  4(2Q34) CNV         13   42
  DEL PEAK  4(2Q34) WILD-TYPE   20   56
        clus
vv       DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE
  FEMALE                    13                          20
  MALE                      42                          56
D32V4, continuous
D32V5, continuous
D32V6, continuous
                             vv
clus                          M0 M1 MX
  DEL PEAK  4(2Q34) CNV       17  0 18
  DEL PEAK  4(2Q34) WILD-TYPE 17  2 26
D32V7, multiclass
    clus
vv   DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE
  M0                    17                          17
  M1                     0                           2
  MX                    18                          26
                             vv
clus                          N0 N1 N2 N3 NX
  DEL PEAK  4(2Q34) CNV       19  5  7  0  4
  DEL PEAK  4(2Q34) WILD-TYPE 26  4  7  3  4
D32V8, multiclass
D32V9, continuous
D32V10, continuous
                             vv
clus                          STAGE II STAGE III STAGE IV
  DEL PEAK  4(2Q34) CNV             11        11       12
  DEL PEAK  4(2Q34) WILD-TYPE       15        16       14
D32V11, multiclass
           clus
vv          DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE
  STAGE II                     11                          15
  STAGE III                    11                          16
  STAGE IV                     12                          14

Clustering(33) Variable = Del Peak  5(2q37.1)
D33V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  5(2Q37.1) CNV       45 17
  DEL PEAK  5(2Q37.1) WILD-TYPE 47 15
      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                           62                            62 
      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                           17                            15 
$`DEL PEAK  5(2Q37.1) CNV`
TCGA-BL-A13J TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20V 
        2.66        19.00        26.10        19.46        14.89         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-CF-A1HR 
        8.35         8.25         5.88         4.64         8.98         0.46 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL 
        0.43        12.92         7.20         5.46         5.19         8.09 
TCGA-DK-A1A5 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 
        2.14       118.88       100.47         6.64         1.81        10.59 
TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
        2.20         3.98         7.82        37.84         5.52        11.51 
TCGA-DK-A3IV TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-FD-A3SN 
        9.67         8.32         8.94         8.94        24.30         6.81 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EK TCGA-G2-A2EL 
       19.79         1.94         4.08        49.91         5.65        26.93 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC 
        0.82         2.86         4.50         1.38         1.02         2.50 
TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX 
        1.08         2.10         6.38         4.37         6.41         6.15 
TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40G TCGA-K4-A3WS 
        7.63         7.79         4.11         6.64         5.33         8.71 
TCGA-K4-A3WU TCGA-K4-A3WV 
        3.42         4.64 

$`DEL PEAK  5(2Q37.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O 
       12.79         7.33         6.74         6.58        11.93        12.16 
TCGA-BT-A20P TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A2LD TCGA-C4-A0F0 TCGA-C4-A0F6 
       17.85         5.06         8.61         3.65         1.94         2.01 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA 
        0.69         4.90         2.53        31.40         8.98         7.04 
TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 
        8.91         7.17         5.85         7.76       123.85        75.32 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC 
        8.22        10.49         8.28        10.55       131.15        36.43 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 
        0.10         8.81         6.87         4.01        11.05         7.96 
TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ 
       32.02        10.98         6.12         5.49         4.54        46.78 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EO 
        7.89         6.84        15.16         2.33        26.50        32.78 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GD-A2C5 
       17.26         7.04        20.12         2.24         1.32         7.69 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JZ TCGA-GV-A40E 
        3.12         5.82         7.56         3.22         5.69         6.38 
TCGA-H4-A2HO TCGA-H4-A2HQ 
        1.51         6.71 

      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                       118.88                        131.15 
      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                        6.395                         7.445 
[1] "0.4 - 118.9 (6.4)" "0.1 - 131.2 (7.4)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
[1] "hr=" "1.4"
D33V2, continuous
D33V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  5(2Q37.1) CNV         12   55
  DEL PEAK  5(2Q37.1) WILD-TYPE   21   43
        clus
vv       DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE
  FEMALE                      12                            21
  MALE                        55                            43
D33V4, continuous
D33V5, continuous
D33V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK  5(2Q37.1) CNV       21  0 22
  DEL PEAK  5(2Q37.1) WILD-TYPE 13  2 22
D33V7, multiclass
    clus
vv   DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE
  M0                      21                            13
  M1                       0                             2
  MX                      22                            22
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK  5(2Q37.1) CNV       24  5  9  1  4
  DEL PEAK  5(2Q37.1) WILD-TYPE 21  4  5  2  4
D33V8, multiclass
D33V9, continuous
D33V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK  5(2Q37.1) CNV             14        13       15
  DEL PEAK  5(2Q37.1) WILD-TYPE       12        14       11
D33V11, multiclass
           clus
vv          DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE
  STAGE II                       14                            12
  STAGE III                      13                            14
  STAGE IV                       15                            11

Clustering(34) Variable = Del Peak  6(3p21.31)
D34V1, survival
                                sevent
clus2                             0  1
  DEL PEAK  6(3P21.31) CNV       29 12
  DEL PEAK  6(3P21.31) WILD-TYPE 63 20
      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                            41                             83 
      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                            12                             20 
$`DEL PEAK  6(3P21.31) CNV`
TCGA-BL-A3JM TCGA-BT-A20J TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20X TCGA-C4-A0EZ 
        6.74        19.00        14.89         5.06         8.25         8.98 
TCGA-C4-A0F0 TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ 
        1.94         0.43        12.92         4.90         7.20         5.46 
TCGA-CU-A3YL TCGA-DK-A1A6 TCGA-DK-A1AB TCGA-DK-A2I2 TCGA-DK-A3IM TCGA-DK-A3IQ 
        8.09        31.40         8.91         7.76         7.82        10.49 
TCGA-DK-A3WX TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3SJ 
       10.55        36.43         8.32         6.87         8.94        24.30 
TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY 
       49.91        26.50        26.93        17.26         7.04         0.82 
TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GU-A42Q 
        2.86         2.24         4.50         2.50         1.08         7.56 
TCGA-GU-A42R TCGA-GV-A3JW TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WV 
        3.22         6.41         6.71         8.71         4.64 

$`DEL PEAK  6(3P21.31) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20N 
       12.79         7.33         2.66         6.58        11.93        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20W 
       12.16        17.85        19.46         5.06         8.61         8.35 
TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C 
        5.88         3.65         4.64         2.01         0.46         0.69 
TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AC 
        5.19         2.53         2.14         8.98         7.04       118.88 
TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 
      100.47         7.17         5.85         6.64         1.81        10.59 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IS 
      123.85        75.32         2.20         3.98         8.22        37.84 
TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 
        5.52        11.51         9.67         8.28       131.15         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA 
        8.81         8.94         4.01        11.05         7.96        32.02 
TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ 
       10.98         6.12         6.81         5.49         4.54        46.78 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
       19.79         1.94         7.89         6.84        15.16         4.08 
TCGA-FT-A3EE TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A3IE TCGA-GC-A3OO TCGA-GC-A3RC 
        2.33         5.65        32.78        20.12         1.32         1.38 
TCGA-GC-A3RD TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P 
        1.02         7.69         2.10         3.12         5.82         6.38 
TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI 
        4.37         6.15         5.69         7.63         7.79         4.11 
TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WU 
        6.64         6.38         5.33         1.51         3.42 

      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                         49.91                         131.15 
      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                          7.76                           6.64 
[1] "0.4 - 49.9 (7.8)"  "0.1 - 131.2 (6.6)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
[1] "hr=" "1.1"
D34V2, continuous
D34V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  6(3P21.31) CNV         12   30
  DEL PEAK  6(3P21.31) WILD-TYPE   21   68
        clus
vv       DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE
  FEMALE                       12                             21
  MALE                         30                             68
D34V4, continuous
D34V5, continuous
D34V6, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK  6(3P21.31) CNV       10  0 13
  DEL PEAK  6(3P21.31) WILD-TYPE 24  2 31
D34V7, multiclass
    clus
vv   DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE
  M0                       10                             24
  M1                        0                              2
  MX                       13                             31
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK  6(3P21.31) CNV       16  2  2  0  2
  DEL PEAK  6(3P21.31) WILD-TYPE 29  7 12  3  6
D34V8, multiclass
D34V9, continuous
D34V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  DEL PEAK  6(3P21.31) CNV              8        12        3
  DEL PEAK  6(3P21.31) WILD-TYPE       18        15       23
D34V11, multiclass
           clus
vv          DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE
  STAGE II                         8                             18
  STAGE III                       12                             15
  STAGE IV                         3                             23

Clustering(35) Variable = Del Peak  7(3p14.2)
D35V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  7(3P14.2) CNV       31 10
  DEL PEAK  7(3P14.2) WILD-TYPE 61 22
      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                           41                            83 
      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                           10                            22 
$`DEL PEAK  7(3P14.2) CNV`
TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-C4-A0EZ TCGA-C4-A0F0 
       14.89         5.06         8.35         8.25         8.98         1.94 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A6 
        0.43        12.92         7.20         5.46         8.09        31.40 
TCGA-DK-A1AB TCGA-DK-A2I2 TCGA-DK-A3IM TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3WX 
        8.91         7.76         7.82        10.49        37.84        10.55 
TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-FD-A3SN 
       36.43         8.32         6.87         8.94        24.30         6.81 
TCGA-FD-A43N TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE 
        7.89        49.91        26.50        17.26         7.04        20.12 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3WC TCGA-GC-A3YS 
        0.82         2.86         2.24         4.50         2.50         1.08 
TCGA-GU-A42Q TCGA-GV-A3JW TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WV 
        7.56         6.41         6.71         8.71         4.64 

$`DEL PEAK  7(3P14.2) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
       19.00        26.10        12.16        17.85        19.46         5.06 
TCGA-BT-A20U TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR 
        8.61         5.88         3.65         4.64         2.01         0.46 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A7 
        0.69         4.90         5.19         2.53         2.14         8.98 
TCGA-DK-A1AA TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG 
        7.04       118.88       100.47         7.17         5.85         6.64 
TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL 
        1.81        10.59       123.85        75.32         2.20         3.98 
TCGA-DK-A3IN TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY 
        8.22         5.52        11.51         9.67         8.28       131.15 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 
        0.10         8.81         8.94         4.01        11.05         7.96 
TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ 
       32.02        10.98         6.12         5.49         4.54        46.78 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE 
       19.79         1.94         6.84        15.16         4.08         2.33 
TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-GC-A3OO TCGA-GC-A3RC TCGA-GC-A3RD 
        5.65        26.93        32.78         1.32         1.38         1.02 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42R 
        7.69         2.10         3.12         5.82         6.38         3.22 
TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI 
        4.37         6.15         5.69         7.63         7.79         4.11 
TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WU 
        6.64         6.38         5.33         1.51         3.42 

      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                        49.91                        131.15 
      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                         7.89                          6.38 
[1] "0.4 - 49.9 (7.9)"  "0.1 - 131.2 (6.4)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
[1] "hr=" "1.3"
D35V2, continuous
D35V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  7(3P14.2) CNV         12   31
  DEL PEAK  7(3P14.2) WILD-TYPE   21   67
        clus
vv       DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE
  FEMALE                      12                            21
  MALE                        31                            67
D35V4, continuous
D35V5, continuous
D35V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK  7(3P14.2) CNV       10  0 16
  DEL PEAK  7(3P14.2) WILD-TYPE 24  2 28
D35V7, multiclass
    clus
vv   DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE
  M0                      10                            24
  M1                       0                             2
  MX                      16                            28
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK  7(3P14.2) CNV       18  2  2  1  3
  DEL PEAK  7(3P14.2) WILD-TYPE 27  7 12  2  5
D35V8, multiclass
D35V9, continuous
D35V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK  7(3P14.2) CNV              9        12        5
  DEL PEAK  7(3P14.2) WILD-TYPE       17        15       21
D35V11, multiclass
           clus
vv          DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE
  STAGE II                        9                            17
  STAGE III                      12                            15
  STAGE IV                        5                            21

Clustering(36) Variable = Del Peak  8(3p12.3)
D36V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  8(3P12.3) CNV       26  9
  DEL PEAK  8(3P12.3) WILD-TYPE 66 23
      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                           35                            89 
      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                            9                            23 
$`DEL PEAK  8(3P12.3) CNV`
TCGA-BT-A20N TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20X TCGA-C4-A0EZ TCGA-C4-A0F0 
       26.10        14.89         5.06         8.25         8.98         1.94 
TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A6 TCGA-DK-A1AB 
       12.92         7.20         5.46         8.09        31.40         8.91 
TCGA-DK-A2I2 TCGA-DK-A3IM TCGA-DK-A3WX TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B6 
        7.76         7.82        10.55        36.43         8.32         6.87 
TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A3IB 
        8.94        24.30        49.91        26.50         5.65         7.04 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3WC TCGA-GC-A3YS 
        0.82         2.86         2.24         4.50         2.50         1.08 
TCGA-GV-A3JW TCGA-GV-A3QH TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WV 
        6.41         7.79         6.71         8.71         4.64 

$`DEL PEAK  8(3P12.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U 
       19.00        12.16        17.85        19.46         5.06         8.61 
TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR 
        8.35         5.88         3.65         4.64         2.01         0.46 
TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 
        0.43         0.69         4.90         5.19         2.53         2.14 
TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF 
        8.98         7.04       118.88       100.47         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK 
        6.64         1.81        10.59       123.85        75.32         2.20 
TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
        3.98         8.22        10.49        37.84         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 
        9.67         8.28       131.15         0.10         8.81         8.94 
TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM 
        4.01        11.05         7.96        32.02        10.98         6.12 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS 
        6.81         5.49         4.54        46.78        19.79         1.94 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EL 
        7.89         6.84        15.16         4.08         2.33        26.93 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE TCGA-GC-A3OO TCGA-GC-A3RC TCGA-GC-A3RD 
       32.78        17.26        20.12         1.32         1.38         1.02 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q 
        7.69         2.10         3.12         5.82         6.38         7.56 
TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QI 
        3.22         4.37         6.15         5.69         7.63         4.11 
TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WU 
        6.64         6.38         5.33         1.51         3.42 

      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                         0.82                          0.10 
      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                        49.91                        131.15 
      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                         7.79                          6.64 
[1] "0.8 - 49.9 (7.8)"  "0.1 - 131.2 (6.6)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
[1] "hr=" "1.1"
D36V2, continuous
D36V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  8(3P12.3) CNV         11   26
  DEL PEAK  8(3P12.3) WILD-TYPE   22   72
        clus
vv       DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE
  FEMALE                      11                            22
  MALE                        26                            72
D36V4, continuous
D36V5, continuous
D36V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK  8(3P12.3) CNV        7  0 14
  DEL PEAK  8(3P12.3) WILD-TYPE 27  2 30
D36V7, multiclass
    clus
vv   DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE
  M0                       7                            27
  M1                       0                             2
  MX                      14                            30
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK  8(3P12.3) CNV       13  2  2  1  3
  DEL PEAK  8(3P12.3) WILD-TYPE 32  7 12  2  5
D36V8, multiclass
D36V9, continuous
D36V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK  8(3P12.3) CNV              8         9        4
  DEL PEAK  8(3P12.3) WILD-TYPE       18        18       22
D36V11, multiclass
           clus
vv          DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE
  STAGE II                        8                            18
  STAGE III                       9                            18
  STAGE IV                        4                            22

Clustering(37) Variable = Del Peak  9(4q22.1)
D37V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  9(4Q22.1) CNV       36 13
  DEL PEAK  9(4Q22.1) WILD-TYPE 56 19
      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                           49                            75 
      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                           13                            19 
$`DEL PEAK  9(4Q22.1) CNV`
TCGA-BL-A13I TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A2LD TCGA-BT-A3PH 
        7.33         5.06         8.61         5.06         3.65         4.64 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO 
        1.94         2.01         0.46         0.43        12.92         4.90 
TCGA-CU-A0YR TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I1 
        7.20         2.53         8.98       100.47         1.81        10.59 
TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ 
        7.76        75.32         2.20         7.82         8.22        10.49 
TCGA-DK-A3IT TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3SJ 
        5.52        36.43         8.81         6.87         4.01        24.30 
TCGA-FD-A3SL TCGA-FD-A3SO TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EL 
       10.98         5.49        15.16         4.08        49.91        26.93 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3OO TCGA-GC-A3RB 
       32.78        17.26         7.04         2.86         1.32         4.50 
TCGA-GD-A2C5 TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3QH TCGA-H4-A2HQ TCGA-K4-A3WS 
        7.69         7.56         4.37         7.79         6.71         8.71 
TCGA-K4-A3WV 
        4.64 

$`DEL PEAK  9(4Q22.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         2.66         6.74         6.58        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20W 
       26.10        12.16        17.85        19.46        14.89         8.35 
TCGA-BT-A20X TCGA-BT-A2LA TCGA-C4-A0EZ TCGA-CF-A27C TCGA-CU-A3KJ TCGA-CU-A3QU 
        8.25         5.88         8.98         0.69         5.46         5.19 
TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC 
        8.09         2.14        31.40         7.04         8.91       118.88 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IS 
        7.17         5.85         6.64       123.85         3.98        37.84 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 
       11.51         9.67         8.28        10.55       131.15         0.10 
TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA 
        8.32         8.94        11.05         8.94         7.96        32.02 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS 
        6.12         6.81         4.54        46.78        19.79         1.94 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A3IE 
        7.89         6.84         2.33        26.50         5.65        20.12 
TCGA-G2-A3VY TCGA-GC-A3I6 TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS 
        0.82         2.24         1.38         1.02         2.50         1.08 
TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JW 
        2.10         3.12         5.82         6.38         3.22         6.41 
TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E 
        6.15         5.69         7.63         4.11         6.64         6.38 
TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WU 
        5.33         1.51         3.42 

      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                       100.47                        131.15 
      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                         7.20                          6.81 
[1] "0.4 - 100.5 (7.2)" "0.1 - 131.2 (6.8)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
[1] "hr=" "1.1"
D37V2, continuous
D37V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  9(4Q22.1) CNV         16   36
  DEL PEAK  9(4Q22.1) WILD-TYPE   17   62
        clus
vv       DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE
  FEMALE                      16                            17
  MALE                        36                            62
D37V4, continuous
D37V5, continuous
D37V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK  9(4Q22.1) CNV       14  1 13
  DEL PEAK  9(4Q22.1) WILD-TYPE 20  1 31
D37V7, multiclass
    clus
vv   DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE
  M0                      14                            20
  M1                       1                             1
  MX                      13                            31
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK  9(4Q22.1) CNV       16  4  5  0  3
  DEL PEAK  9(4Q22.1) WILD-TYPE 29  5  9  3  5
D37V8, multiclass
D37V9, continuous
D37V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK  9(4Q22.1) CNV              9        10        9
  DEL PEAK  9(4Q22.1) WILD-TYPE       17        17       17
D37V11, multiclass
           clus
vv          DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE
  STAGE II                        9                            17
  STAGE III                      10                            17
  STAGE IV                        9                            17

Clustering(38) Variable = Del Peak 10(4q34.2)
D38V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 10(4Q34.2) CNV       41 15
  DEL PEAK 10(4Q34.2) WILD-TYPE 51 17
      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                           56                            68 
      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                           15                            17 
$`DEL PEAK 10(4Q34.2) CNV`
TCGA-BL-A13J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W 
        2.66        26.10         5.06        14.89         5.06         8.35 
TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN 
        3.65         4.64         1.94         0.46         0.43        12.92 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A1AD TCGA-DK-A1AE 
        4.90         7.20         2.53         8.98       100.47         7.17 
TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM 
        1.81        10.59         7.76        75.32         2.20         7.82 
TCGA-DK-A3IN TCGA-DK-A3IT TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B7 
        8.22         5.52        36.43         8.81         6.87         4.01 
TCGA-FD-A3SL TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
       10.98         6.81         5.49         7.89        15.16         4.08 
TCGA-G2-A2EF TCGA-G2-A2EL TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM 
       49.91        26.93         7.04        20.12         0.82         2.86 
TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GU-A42Q 
        1.32         4.50         1.38         2.50         7.69         7.56 
TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QH TCGA-GV-A40G TCGA-H4-A2HQ 
        3.22         4.37         6.41         7.79         5.33         6.71 
TCGA-K4-A3WS TCGA-K4-A3WV 
        8.71         4.64 

$`DEL PEAK 10(4Q34.2) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         6.74         6.58        11.93        19.00 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20X TCGA-BT-A2LA 
       12.16        17.85        19.46         8.61         8.25         5.88 
TCGA-C4-A0EZ TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL 
        8.98         2.01         0.69         5.46         5.19         8.09 
TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AF 
        2.14        31.40         7.04         8.91       118.88         5.85 
TCGA-DK-A1AG TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IU 
        6.64       123.85         3.98        10.49        37.84        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B4 
        9.67         8.28        10.55       131.15         0.10         8.32 
TCGA-FD-A3B5 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ 
        8.94        11.05         8.94         7.96        32.02        24.30 
TCGA-FD-A3SM TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43U 
        6.12         4.54        46.78        19.79         1.94         6.84 
TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-GC-A3I6 
        2.33        26.50         5.65        32.78        17.26         2.24 
TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P 
        1.02         1.08         2.10         3.12         5.82         6.38 
TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E 
        6.15         5.69         7.63         4.11         6.64         6.38 
TCGA-H4-A2HO TCGA-K4-A3WU 
        1.51         3.42 

      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                       100.47                        131.15 
      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                         6.76                          7.48 
[1] "0.4 - 100.5 (6.8)" "0.1 - 131.2 (7.5)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
[1] "hr=" "1.4"
D38V2, continuous
D38V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 10(4Q34.2) CNV         14   45
  DEL PEAK 10(4Q34.2) WILD-TYPE   19   53
        clus
vv       DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE
  FEMALE                      14                            19
  MALE                        45                            53
D38V4, continuous
D38V5, continuous
D38V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 10(4Q34.2) CNV       13  1 20
  DEL PEAK 10(4Q34.2) WILD-TYPE 21  1 24
D38V7, multiclass
    clus
vv   DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE
  M0                      13                            21
  M1                       1                             1
  MX                      20                            24
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 10(4Q34.2) CNV       20  4  5  0  4
  DEL PEAK 10(4Q34.2) WILD-TYPE 25  5  9  3  4
D38V8, multiclass
D38V9, continuous
D38V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK 10(4Q34.2) CNV             14        11        9
  DEL PEAK 10(4Q34.2) WILD-TYPE       12        16       17
D38V11, multiclass
           clus
vv          DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE
  STAGE II                       14                            12
  STAGE III                      11                            16
  STAGE IV                        9                            17

Clustering(39) Variable = Del Peak 11(5q11.2)
D39V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 11(5Q11.2) CNV       47 16
  DEL PEAK 11(5Q11.2) WILD-TYPE 45 16
      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                           63                            61 
      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                           16                            16 
$`DEL PEAK 11(5Q11.2) CNV`
TCGA-BL-A0C8 TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20T 
       12.79         6.58        19.00        26.10         5.06        14.89 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F6 
        5.06         8.35         5.88         3.65         4.64         2.01 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1A7 TCGA-DK-A1AD 
        0.46         0.43         5.19         2.14         8.98       100.47 
TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM 
       10.59       123.85        75.32         2.20         3.98         7.82 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV 
        8.22        10.49        37.84         5.52        11.51         9.67 
TCGA-DK-A3WX TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3SJ 
       10.55        36.43         8.94         6.87         8.94        24.30 
TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43U 
       10.98         6.12         4.54        19.79         1.94         6.84 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EL TCGA-G2-A3IB TCGA-G2-A3VY 
       15.16         4.08        49.91        26.93         7.04         0.82 
TCGA-GC-A3BM TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P TCGA-GV-A3JW 
        2.86         1.08         7.69         2.10         6.38         6.41 
TCGA-GV-A3JX TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G 
        6.15         7.63         7.79         4.11         6.38         5.33 
TCGA-H4-A2HQ TCGA-K4-A3WU TCGA-K4-A3WV 
        6.71         3.42         4.64 

$`DEL PEAK 11(5Q11.2) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P 
        7.33         2.66         6.74        11.93        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20X TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A27C 
       19.46         8.61         8.25         8.98         1.94         0.69 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 
       12.92         4.90         7.20         5.46         8.09         2.53 
TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF 
       31.40         7.04         8.91       118.88         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 
        6.64         1.81         7.76         8.28       131.15         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA 
        8.81         8.32         4.01        11.05         7.96        32.02 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A43N TCGA-FT-A3EE TCGA-G2-A2EJ 
        6.81         5.49        46.78         7.89         2.33        26.50 
TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE TCGA-GC-A3I6 TCGA-GC-A3OO 
        5.65        32.78        17.26        20.12         2.24         1.32 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GD-A3OQ TCGA-GD-A3OS 
        4.50         1.38         1.02         2.50         3.12         5.82 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A3QK TCGA-H4-A2HO 
        7.56         3.22         4.37         5.69         6.64         1.51 
TCGA-K4-A3WS 
        8.71 

      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                       123.85                        131.15 
      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                         6.84                          7.17 
[1] "0.4 - 123.8 (6.8)" "0.1 - 131.2 (7.2)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
[1] "hr=" "1.1"
D39V2, continuous
D39V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 11(5Q11.2) CNV         14   54
  DEL PEAK 11(5Q11.2) WILD-TYPE   19   44
        clus
vv       DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE
  FEMALE                      14                            19
  MALE                        54                            44
D39V4, continuous
D39V5, continuous
D39V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 11(5Q11.2) CNV       19  2 25
  DEL PEAK 11(5Q11.2) WILD-TYPE 15  0 19
D39V7, multiclass
    clus
vv   DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE
  M0                      19                            15
  M1                       2                             0
  MX                      25                            19
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 11(5Q11.2) CNV       20  6 12  2  6
  DEL PEAK 11(5Q11.2) WILD-TYPE 25  3  2  1  2
D39V8, multiclass
D39V9, continuous
D39V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK 11(5Q11.2) CNV             16        10       19
  DEL PEAK 11(5Q11.2) WILD-TYPE       10        17        7
D39V11, multiclass
           clus
vv          DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE
  STAGE II                       16                            10
  STAGE III                      10                            17
  STAGE IV                       19                             7

Clustering(40) Variable = Del Peak 12(5q35.1)
D40V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 12(5Q35.1) CNV       46 15
  DEL PEAK 12(5Q35.1) WILD-TYPE 46 17
      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                           61                            63 
      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                           15                            17 
$`DEL PEAK 12(5Q35.1) CNV`
TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20V TCGA-BT-A20W 
        6.58        19.00        26.10         5.06         5.06         8.35 
TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CU-A3QU TCGA-DK-A1A3 
        3.65         4.64         2.01         0.46         5.19         2.53 
TCGA-DK-A1A5 TCGA-DK-A1AA TCGA-DK-A1AD TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 
        2.14         7.04       100.47        10.59       123.85        75.32 
TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3WX 
        3.98         8.22        10.49        37.84         5.52        10.55 
TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SJ 
       36.43         8.94         6.87         8.94        32.02        24.30 
TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FD-A3SS 
       10.98         6.12         6.81         4.54        19.79         1.94 
TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EL TCGA-G2-A3IB 
        6.84        15.16         4.08        49.91        26.93         7.04 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD 
       20.12         0.82         2.86         4.50         1.38         1.02 
TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P TCGA-GV-A3JW TCGA-GV-A3JX 
        1.08         7.69         2.10         6.38         6.41         6.15 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ 
        5.69         7.63         7.79         6.38         5.33         6.71 
TCGA-K4-A3WU 
        3.42 

$`DEL PEAK 12(5Q35.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20O 
       12.79         7.33         2.66         6.74        11.93        12.16 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20X TCGA-BT-A2LA 
       17.85        19.46        14.89         8.61         8.25         5.88 
TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO 
        8.98         1.94         0.43         0.69        12.92         4.90 
TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AB 
        7.20         5.46         8.09        31.40         8.98         8.91 
TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 
      118.88         7.17         5.85         6.64         1.81         7.76 
TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY 
        2.20         7.82        11.51         9.67         8.28       131.15 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 
        0.10         8.81         8.32         4.01        11.05         7.96 
TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A43N TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK 
        5.49        46.78         7.89         2.33        26.50         5.65 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3WC TCGA-GD-A3OQ 
       32.78        17.26         2.24         1.32         2.50         3.12 
TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3QI TCGA-GV-A3QK 
        5.82         7.56         3.22         4.37         4.11         6.64 
TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WV 
        1.51         8.71         4.64 

      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                         0.46                          0.10 
      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                       123.85                        131.15 
      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                         6.71                          7.56 
[1] "0.5 - 123.8 (6.7)" "0.1 - 131.2 (7.6)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
[1] "hr=" "1.3"
D40V2, continuous
D40V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 12(5Q35.1) CNV         12   54
  DEL PEAK 12(5Q35.1) WILD-TYPE   21   44
        clus
vv       DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE
  FEMALE                      12                            21
  MALE                        54                            44
D40V4, continuous
D40V5, continuous
D40V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 12(5Q35.1) CNV       18  2 27
  DEL PEAK 12(5Q35.1) WILD-TYPE 16  0 17
D40V7, multiclass
    clus
vv   DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE
  M0                      18                            16
  M1                       2                             0
  MX                      27                            17
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 12(5Q35.1) CNV       21  6 11  3  6
  DEL PEAK 12(5Q35.1) WILD-TYPE 24  3  3  0  2
D40V8, multiclass
D40V9, continuous
D40V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK 12(5Q35.1) CNV             16        10       20
  DEL PEAK 12(5Q35.1) WILD-TYPE       10        17        6
D40V11, multiclass
           clus
vv          DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE
  STAGE II                       16                            10
  STAGE III                      10                            17
  STAGE IV                       20                             6

Clustering(41) Variable = Del Peak 13(6p25.3)
D41V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 13(6P25.3) CNV       30  5
  DEL PEAK 13(6P25.3) WILD-TYPE 62 27
      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                           35                            89 
      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                            5                            27 
$`DEL PEAK 13(6P25.3) CNV`
TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-CU-A0YR 
        5.06         8.25         5.88         3.65         4.64         7.20 
TCGA-DK-A1A6 TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A2HX TCGA-DK-A2I1 
       31.40         8.91       118.88         7.17         1.81        10.59 
TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IT TCGA-FD-A3B4 TCGA-FD-A3B6 
        7.76       123.85         3.98         5.52         8.32         6.87 
TCGA-FD-A3B7 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SN TCGA-FD-A43U TCGA-FJ-A3Z7 
        4.01        32.02        10.98         6.81         6.84        15.16 
TCGA-FJ-A3ZF TCGA-G2-A2EO TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GV-A3JZ TCGA-GV-A3QF 
        4.08        32.78         2.10         5.82         5.69         7.63 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HQ 
        7.79         4.11         6.64         6.38         6.71 

$`DEL PEAK 13(6P25.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
       19.00        26.10        12.16        17.85        19.46         5.06 
TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20W TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 
       14.89         8.61         8.35         8.98         1.94         2.01 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3KJ 
        0.46         0.43         0.69        12.92         4.90         5.46 
TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A7 TCGA-DK-A1AA 
        5.19         8.09         2.53         2.14         8.98         7.04 
TCGA-DK-A1AD TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM 
      100.47         5.85         6.64        75.32         2.20         7.82 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW 
        8.22        10.49        37.84        11.51         9.67         8.28 
TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 
       10.55       131.15        36.43         0.10         8.81         8.94 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SJ TCGA-FD-A3SM TCGA-FD-A3SO 
       11.05         8.94         7.96        24.30         6.12         5.49 
TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FT-A3EE 
        4.54        46.78        19.79         1.94         7.89         2.33 
TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES TCGA-G2-A3IB 
       49.91        26.50         5.65        26.93        17.26         7.04 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB 
       20.12         0.82         2.86         2.24         1.32         4.50 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OQ 
        1.38         1.02         2.50         1.08         7.69         3.12 
TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX 
        6.38         7.56         3.22         4.37         6.41         6.15 
TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        5.33         1.51         8.71         3.42         4.64 

      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                         1.81                          0.10 
      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                       123.85                        131.15 
      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                         6.84                          7.04 
[1] "1.8 - 123.8 (6.8)" "0.1 - 131.2 (7.0)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
[1] "hr=" "2"  
D41V2, continuous
D41V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 13(6P25.3) CNV         12   24
  DEL PEAK 13(6P25.3) WILD-TYPE   21   74
        clus
vv       DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE
  FEMALE                      12                            21
  MALE                        24                            74
D41V4, continuous
D41V5, continuous
D41V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 13(6P25.3) CNV        7  1 15
  DEL PEAK 13(6P25.3) WILD-TYPE 27  1 29
D41V7, multiclass
    clus
vv   DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE
  M0                       7                            27
  M1                       1                             1
  MX                      15                            29
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 13(6P25.3) CNV       10  1  8  1  3
  DEL PEAK 13(6P25.3) WILD-TYPE 35  8  6  2  5
D41V8, multiclass
D41V9, continuous
D41V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK 13(6P25.3) CNV              6         6       11
  DEL PEAK 13(6P25.3) WILD-TYPE       20        21       15
D41V11, multiclass
           clus
vv          DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE
  STAGE II                        6                            20
  STAGE III                       6                            21
  STAGE IV                       11                            15

Clustering(42) Variable = Del Peak 14(6q21)
D42V1, survival
                             sevent
clus2                          0  1
  DEL PEAK 14(6Q21) CNV       40 11
  DEL PEAK 14(6Q21) WILD-TYPE 52 21
      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                         51                          73 
      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                         11                          21 
$`DEL PEAK 14(6Q21) CNV`
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A2LD TCGA-BT-A3PH 
       19.00        26.10        14.89         5.06         3.65         4.64 
TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A6 
        1.94         0.46         0.69         5.19         2.53        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AB TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 
        8.98         8.91         1.81        10.59         7.76       123.85 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT 
       75.32         2.20         3.98        10.49        37.84         5.52 
TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SN TCGA-FD-A3SQ 
       36.43         8.94        24.30        10.98         6.81        46.78 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-G2-A2EO TCGA-G2-A2ES 
       19.79         1.94         6.84        15.16        32.78        17.26 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3I6 TCGA-GC-A3RD TCGA-GD-A3OP TCGA-GU-A42P 
       20.12         0.82         2.24         1.02         2.10         6.38 
TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A40E 
        3.22         6.41         6.15         7.63         7.79         6.38 
TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WV 
        5.33         6.71         4.64 

$`DEL PEAK 14(6Q21) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20W 
       12.16        17.85        19.46         5.06         8.61         8.35 
TCGA-BT-A20X TCGA-BT-A2LA TCGA-C4-A0EZ TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CU-A0YN 
        8.25         5.88         8.98         2.01         0.43        12.92 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1AA 
        4.90         7.20         5.46         8.09         2.14         7.04 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A3IM 
      118.88       100.47         7.17         5.85         6.64         7.82 
TCGA-DK-A3IN TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY 
        8.22        11.51         9.67         8.28        10.55       131.15 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        0.10         8.81         8.32         6.87         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP 
        8.94         7.96        32.02         6.12         5.49         4.54 
TCGA-FD-A43N TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK 
        7.89         4.08         2.33        49.91        26.50         5.65 
TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC 
       26.93         7.04         2.86         1.32         4.50         1.38 
TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q 
        2.50         1.08         7.69         3.12         5.82         7.56 
TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A3QI TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WS 
        4.37         5.69         4.11         6.64         1.51         8.71 
TCGA-K4-A3WU 
        3.42 

      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                       0.46                        0.10 
      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                     123.85                      131.15 
      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                       6.81                        7.04 
[1] "0.5 - 123.8 (6.8)" "0.1 - 131.2 (7.0)"
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
[1] "hr=" "1.8"
D42V2, continuous
D42V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 14(6Q21) CNV         13   42
  DEL PEAK 14(6Q21) WILD-TYPE   20   56
        clus
vv       DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE
  FEMALE                    13                          20
  MALE                      42                          56
D42V4, continuous
D42V5, continuous
D42V6, continuous
                             vv
clus                          M0 M1 MX
  DEL PEAK 14(6Q21) CNV       14  1 21
  DEL PEAK 14(6Q21) WILD-TYPE 20  1 23
D42V7, multiclass
    clus
vv   DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE
  M0                    14                          20
  M1                     1                           1
  MX                    21                          23
                             vv
clus                          N0 N1 N2 N3 NX
  DEL PEAK 14(6Q21) CNV       12  5 12  1  5
  DEL PEAK 14(6Q21) WILD-TYPE 33  4  2  2  3
D42V8, multiclass
D42V9, continuous
D42V10, continuous
                             vv
clus                          STAGE II STAGE III STAGE IV
  DEL PEAK 14(6Q21) CNV             12         6       18
  DEL PEAK 14(6Q21) WILD-TYPE       14        21        8
D42V11, multiclass
           clus
vv          DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE
  STAGE II                     12                          14
  STAGE III                     6                          21
  STAGE IV                     18                           8

Clustering(43) Variable = Del Peak 15(8p23.1)
D43V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 15(8P23.1) CNV       56 15
  DEL PEAK 15(8P23.1) WILD-TYPE 36 17
      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                           71                            53 
      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                           15                            17 
$`DEL PEAK 15(8P23.1) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BT-A20J TCGA-BT-A20V TCGA-BT-A20W TCGA-C4-A0EZ 
       12.79         2.66        19.00         5.06         8.35         8.98 
TCGA-C4-A0F0 TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3KJ 
        1.94         0.43         0.69        12.92         7.20         5.46 
TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A7 TCGA-DK-A1AC 
        5.19         8.09         2.53         2.14         8.98       118.88 
TCGA-DK-A1AD TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 
      100.47         6.64         1.81        10.59       123.85        75.32 
TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT 
        2.20         3.98         7.82         8.22        10.49         5.52 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 
       11.51         9.67         8.32         8.94         6.87         4.01 
TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO 
        8.94        32.02        24.30        10.98         6.12         5.49 
TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
        4.54        19.79         1.94         7.89        15.16         4.08 
TCGA-G2-A2EF TCGA-G2-A2EK TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3RB TCGA-GC-A3RC 
       49.91         5.65        20.12         0.82         4.50         1.38 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ 
        1.02         2.50         1.08         7.69         2.10         3.12 
TCGA-GU-A42P TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A40E 
        6.38         6.15         5.69         7.63         7.79         6.38 
TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        5.33         6.71         8.71         3.42         4.64 

$`DEL PEAK 15(8P23.1) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20N TCGA-BT-A20O 
        7.33         6.74         6.58        11.93        26.10        12.16 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20X 
       17.85        19.46         5.06        14.89         8.61         8.25 
TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CU-A0YO 
        5.88         3.65         4.64         2.01         0.46         4.90 
TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A2I2 
       31.40         7.04         8.91         7.17         5.85         7.76 
TCGA-DK-A3IS TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 
       37.84         8.28        10.55       131.15        36.43         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3SN TCGA-FD-A3SQ TCGA-FD-A43U 
        8.81        11.05         7.96         6.81        46.78         6.84 
TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB 
        2.33        26.50        26.93        32.78        17.26         7.04 
TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R 
        2.86         2.24         1.32         5.82         7.56         3.22 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QI TCGA-GV-A3QK TCGA-H4-A2HO 
        4.37         6.41         4.11         6.64         1.51 

      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                       123.85                        131.15 
      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                         6.64                          7.17 
[1] "0.4 - 123.8 (6.6)" "0.1 - 131.2 (7.2)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
[1] "hr=" "1.2"
D43V2, continuous
D43V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 15(8P23.1) CNV         14   60
  DEL PEAK 15(8P23.1) WILD-TYPE   19   38
        clus
vv       DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE
  FEMALE                      14                            19
  MALE                        60                            38
D43V4, continuous
D43V5, continuous
D43V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 15(8P23.1) CNV       19  2 28
  DEL PEAK 15(8P23.1) WILD-TYPE 15  0 16
D43V7, multiclass
    clus
vv   DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE
  M0                      19                            15
  M1                       2                             0
  MX                      28                            16
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 15(8P23.1) CNV       26  6  9  3  5
  DEL PEAK 15(8P23.1) WILD-TYPE 19  3  5  0  3
D43V8, multiclass
D43V9, continuous
D43V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK 15(8P23.1) CNV             14        17       18
  DEL PEAK 15(8P23.1) WILD-TYPE       12        10        8
D43V11, multiclass
           clus
vv          DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE
  STAGE II                       14                            12
  STAGE III                      17                            10
  STAGE IV                       18                             8

Clustering(44) Variable = Del Peak 16(9p23)
D44V1, survival
                             sevent
clus2                          0  1
  DEL PEAK 16(9P23) CNV       40 12
  DEL PEAK 16(9P23) WILD-TYPE 52 20
      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                         52                          72 
      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                         12                          20 
$`DEL PEAK 16(9P23) CNV`
TCGA-BL-A0C8 TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20Q TCGA-BT-A20T 
       12.79        11.93        19.00        26.10        19.46        14.89 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A27C 
        8.35         8.25         5.88         1.94         0.46         0.69 
TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1AA TCGA-DK-A1AB 
        4.90         5.46         8.09         2.53         7.04         8.91 
TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A3IK TCGA-DK-A3IN TCGA-DK-A3IQ 
        5.85         6.64        10.59         2.20         8.22        10.49 
TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3WX TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B5 
       37.84         5.52        10.55        36.43         8.32         8.94 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N 
        6.12         6.81        46.78        19.79         1.94         7.89 
TCGA-G2-A2EJ TCGA-G2-A2EO TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3RD TCGA-GC-A3YS 
       26.50        32.78         7.04         0.82         1.02         1.08 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GV-A3JW TCGA-GV-A3QH TCGA-GV-A3QK 
        3.12         5.82         7.56         6.41         7.79         6.64 
TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        6.71         8.71         3.42         4.64 

$`DEL PEAK 16(9P23) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20O TCGA-BT-A20P 
        7.33         2.66         6.74         6.58        12.16        17.85 
TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
        5.06         8.61         5.06         3.65         4.64         8.98 
TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3QU TCGA-DK-A1A5 
        2.01         0.43        12.92         7.20         5.19         2.14 
TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A2HX 
       31.40         8.98       118.88       100.47         7.17         1.81 
TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IU 
        7.76       123.85        75.32         3.98         7.82        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B6 
        9.67         8.28       131.15         0.10         8.81         6.87 
TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ 
        4.01        11.05         8.94         7.96        32.02        24.30 
TCGA-FD-A3SL TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
       10.98         5.49         4.54         6.84        15.16         4.08 
TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES TCGA-G2-A3IE 
        2.33        49.91         5.65        26.93        17.26        20.12 
TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC 
        2.86         2.24         1.32         4.50         1.38         2.50 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX 
        7.69         2.10         6.38         3.22         4.37         6.15 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO 
        5.69         7.63         4.11         6.38         5.33         1.51 

      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                       0.46                        0.10 
      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                      46.78                      131.15 
      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                       7.30                        6.79 
[1] "0.5 - 46.8 (7.3)"  "0.1 - 131.2 (6.8)"
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
[1] "hr=" "1.2"
D44V2, continuous
D44V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 16(9P23) CNV         13   45
  DEL PEAK 16(9P23) WILD-TYPE   20   53
        clus
vv       DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE
  FEMALE                    13                          20
  MALE                      45                          53
D44V4, continuous
D44V5, continuous
D44V6, continuous
                             vv
clus                          M0 M1 MX
  DEL PEAK 16(9P23) CNV       16  1 18
  DEL PEAK 16(9P23) WILD-TYPE 18  1 26
D44V7, multiclass
    clus
vv   DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE
  M0                    16                          18
  M1                     1                           1
  MX                    18                          26
                             vv
clus                          N0 N1 N2 N3 NX
  DEL PEAK 16(9P23) CNV       19  4  6  1  5
  DEL PEAK 16(9P23) WILD-TYPE 26  5  8  2  3
D44V8, multiclass
D44V9, continuous
D44V10, continuous
                             vv
clus                          STAGE II STAGE III STAGE IV
  DEL PEAK 16(9P23) CNV             11        12       11
  DEL PEAK 16(9P23) WILD-TYPE       15        15       15
D44V11, multiclass
           clus
vv          DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE
  STAGE II                     11                          15
  STAGE III                    12                          15
  STAGE IV                     11                          15

Clustering(45) Variable = Del Peak 17(9p21.3)
D45V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 17(9P21.3) CNV       50 20
  DEL PEAK 17(9P21.3) WILD-TYPE 42 12
      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                           70                            54 
      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                           20                            12 
$`DEL PEAK 17(9P21.3) CNV`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         2.66         6.58        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V 
       26.10        17.85        19.46        14.89         8.61         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C 
        8.35         8.25         1.94         2.01         0.46         0.69 
TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1AA 
        4.90         5.46         8.09         2.53         2.14         7.04 
TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A3IK 
        8.91         7.17         5.85         6.64        10.59         2.20 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3WW TCGA-DK-A3WX 
        8.22        10.49        37.84         5.52         8.28        10.55 
TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SM TCGA-FD-A3SN 
       36.43         8.94         7.96        32.02         6.12         6.81 
TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U 
        4.54        46.78        19.79         1.94         7.89         6.84 
TCGA-FJ-A3Z7 TCGA-G2-A2EF TCGA-G2-A2EO TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY 
       15.16        49.91        32.78         7.04        20.12         0.82 
TCGA-GC-A3BM TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q 
        2.86         1.02         1.08         3.12         5.82         7.56 
TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QK TCGA-GV-A40E 
        3.22         6.41         7.63         7.79         6.64         6.38 
TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        6.71         8.71         3.42         4.64 

$`DEL PEAK 17(9P21.3) WILD-TYPE`
TCGA-BL-A3JM TCGA-BT-A20O TCGA-BT-A20R TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH 
        6.74        12.16         5.06         5.88         3.65         4.64 
TCGA-C4-A0EZ TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3QU TCGA-DK-A1A6 
        8.98         0.43        12.92         7.20         5.19        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 
        8.98       118.88       100.47         1.81         7.76       123.85 
TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WY 
       75.32         3.98         7.82        11.51         9.67       131.15 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        0.10         8.81         8.32         6.87         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SO TCGA-FJ-A3ZF TCGA-FT-A3EE 
        8.94        24.30        10.98         5.49         4.08         2.33 
TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES TCGA-GC-A3I6 TCGA-GC-A3OO 
       26.50         5.65        26.93        17.26         2.24         1.32 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P 
        4.50         1.38         2.50         7.69         2.10         6.38 
TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QI TCGA-GV-A40G TCGA-H4-A2HO 
        4.37         6.15         5.69         4.11         5.33         1.51 

      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                         0.46                          0.10 
      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                        49.91                        131.15 
      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                        7.105                         6.560 
[1] "0.5 - 49.9 (7.1)"  "0.1 - 131.2 (6.6)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
[1] "hr=" "1.4"
D45V2, continuous
D45V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 17(9P21.3) CNV         17   59
  DEL PEAK 17(9P21.3) WILD-TYPE   16   39
        clus
vv       DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE
  FEMALE                      17                            16
  MALE                        59                            39
D45V4, continuous
D45V5, continuous
D45V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 17(9P21.3) CNV       18  1 26
  DEL PEAK 17(9P21.3) WILD-TYPE 16  1 18
D45V7, multiclass
    clus
vv   DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE
  M0                      18                            16
  M1                       1                             1
  MX                      26                            18
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 17(9P21.3) CNV       23  4  9  1  7
  DEL PEAK 17(9P21.3) WILD-TYPE 22  5  5  2  1
D45V8, multiclass
D45V9, continuous
D45V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK 17(9P21.3) CNV             17        13       14
  DEL PEAK 17(9P21.3) WILD-TYPE        9        14       12
D45V11, multiclass
           clus
vv          DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE
  STAGE II                       17                             9
  STAGE III                      13                            14
  STAGE IV                       14                            12

Clustering(46) Variable = Del Peak 18(10p12.1)
D46V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 18(10P12.1) CNV       21  6
  DEL PEAK 18(10P12.1) WILD-TYPE 71 26
      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                            27                             97 
      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                             6                             26 
$`DEL PEAK 18(10P12.1) CNV`
TCGA-BT-A20U TCGA-BT-A2LA TCGA-C4-A0F0 TCGA-CF-A27C TCGA-CU-A0YR TCGA-CU-A3KJ 
        8.61         5.88         1.94         0.69         7.20         5.46 
TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A3IK TCGA-DK-A3IS TCGA-E5-A2PC TCGA-FD-A3B4 
        1.81         7.76         2.20        37.84        36.43         8.32 
TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3N5 TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N 
        8.94         4.01         8.94        19.79         1.94         7.89 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3RC 
       15.16         4.08        26.93         7.04         2.86         1.38 
TCGA-GC-A3WC TCGA-GV-A40G TCGA-H4-A2HQ 
        2.50         5.33         6.71 

$`DEL PEAK 18(10P12.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
       19.00        26.10        12.16        17.85        19.46         5.06 
TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LD TCGA-BT-A3PH 
       14.89         5.06         8.35         8.25         3.65         4.64 
TCGA-C4-A0EZ TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO 
        8.98         2.01         0.46         0.43        12.92         4.90 
TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 
        5.19         8.09         2.53         2.14        31.40         8.98 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF 
        7.04         8.91       118.88       100.47         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IM 
        6.64        10.59       123.85        75.32         3.98         7.82 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW 
        8.22        10.49         5.52        11.51         9.67         8.28 
TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B8 
       10.55       131.15         0.10         8.81         6.87        11.05 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
        7.96        32.02        24.30        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43U TCGA-FT-A3EE TCGA-G2-A2EF 
        5.49         4.54        46.78         6.84         2.33        49.91 
TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE TCGA-G2-A3VY 
       26.50         5.65        32.78        17.26        20.12         0.82 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 
        2.24         1.32         4.50         1.02         1.08         7.69 
TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R 
        2.10         3.12         5.82         6.38         7.56         3.22 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH 
        4.37         6.41         6.15         5.69         7.63         7.79 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        4.11         6.64         6.38         1.51         8.71         3.42 
TCGA-K4-A3WV 
        4.64 

      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                          0.69                           0.10 
      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                         37.84                         131.15 
      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                          6.71                           7.04 
[1] "0.7 - 37.8 (6.7)"  "0.1 - 131.2 (7.0)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
[1] "hr=" "1"  
D46V2, continuous
D46V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 18(10P12.1) CNV          7   20
  DEL PEAK 18(10P12.1) WILD-TYPE   26   78
        clus
vv       DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE
  FEMALE                        7                             26
  MALE                         20                             78
D46V4, continuous
D46V5, continuous
D46V6, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 18(10P12.1) CNV        6  0 12
  DEL PEAK 18(10P12.1) WILD-TYPE 28  2 32
D46V7, multiclass
    clus
vv   DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE
  M0                        6                             28
  M1                        0                              2
  MX                       12                             32
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 18(10P12.1) CNV       11  2  3  1  1
  DEL PEAK 18(10P12.1) WILD-TYPE 34  7 11  2  7
D46V8, multiclass
D46V9, continuous
D46V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  DEL PEAK 18(10P12.1) CNV              6         6        6
  DEL PEAK 18(10P12.1) WILD-TYPE       20        21       20
D46V11, multiclass
           clus
vv          DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE
  STAGE II                         6                             20
  STAGE III                        6                             21
  STAGE IV                         6                             20

Clustering(47) Variable = Del Peak 19(10q23.31)
D47V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 19(10Q23.31) CNV       42 14
  DEL PEAK 19(10Q23.31) WILD-TYPE 50 18
      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                             56                              68 
      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                             14                              18 
$`DEL PEAK 19(10Q23.31) CNV`
TCGA-BL-A0C8 TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20W 
       12.79        26.10         5.06         8.61         5.06         8.35 
TCGA-BT-A2LD TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A3KJ 
        3.65         1.94         2.01         0.69         4.90         5.46 
TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1A7 TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I2 
        5.19         2.14         8.98       100.47         1.81         7.76 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IS 
       75.32         2.20         3.98         7.82         8.22        37.84 
TCGA-DK-A3IV TCGA-E5-A2PC TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-FD-A3SR 
        9.67        36.43         6.87         8.94        24.30        19.79 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EK 
        1.94         7.89         6.84        15.16         4.08         5.65 
TCGA-G2-A2EL TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RC 
       26.93         7.04        20.12         0.82         2.86         1.38 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GD-A3OP TCGA-GU-A42P TCGA-GV-A3JW TCGA-GV-A3JX 
        1.02         2.50         2.10         6.38         6.41         6.15 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40G TCGA-H4-A2HQ 
        5.69         7.63         7.79         4.11         5.33         6.71 
TCGA-K4-A3WS TCGA-K4-A3WU 
        8.71         3.42 

$`DEL PEAK 19(10Q23.31) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
        7.33         2.66         6.74         6.58        11.93        19.00 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20X TCGA-BT-A2LA 
       12.16        17.85        19.46        14.89         8.25         5.88 
TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR 
        4.64         8.98         0.46         0.43        12.92         7.20 
TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC 
        8.09         2.53        31.40         7.04         8.91       118.88 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A3IQ 
        7.17         5.85         6.64        10.59       123.85        10.49 
TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 
        5.52        11.51         8.28        10.55       131.15         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 
        8.81         8.32         8.94         4.01        11.05         7.96 
TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP 
       32.02        10.98         6.12         6.81         5.49         4.54 
TCGA-FD-A3SQ TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EO TCGA-G2-A2ES 
       46.78         2.33        49.91        26.50        32.78        17.26 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OQ 
        2.24         1.32         4.50         1.08         7.69         3.12 
TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3QK TCGA-GV-A40E 
        5.82         7.56         3.22         4.37         6.64         6.38 
TCGA-H4-A2HO TCGA-K4-A3WV 
        1.51         4.64 

      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                           0.69                            0.10 
      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                         100.47                          131.15 
      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                          6.395                           7.445 
[1] "0.7 - 100.5 (6.4)" "0.1 - 131.2 (7.4)"
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
[1] "hr=" "1.2"
D47V2, continuous
D47V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 19(10Q23.31) CNV         14   43
  DEL PEAK 19(10Q23.31) WILD-TYPE   19   55
        clus
vv       DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE
  FEMALE                        14                              19
  MALE                          43                              55
D47V4, continuous
D47V5, continuous
D47V6, continuous
                                 vv
clus                              M0 M1 MX
  DEL PEAK 19(10Q23.31) CNV       15  0 22
  DEL PEAK 19(10Q23.31) WILD-TYPE 19  2 22
D47V7, multiclass
    clus
vv   DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE
  M0                        15                              19
  M1                         0                               2
  MX                        22                              22
                                 vv
clus                              N0 N1 N2 N3 NX
  DEL PEAK 19(10Q23.31) CNV       17  4  8  2  6
  DEL PEAK 19(10Q23.31) WILD-TYPE 28  5  6  1  2
D47V8, multiclass
D47V9, continuous
D47V10, continuous
                                 vv
clus                              STAGE II STAGE III STAGE IV
  DEL PEAK 19(10Q23.31) CNV             13        10       14
  DEL PEAK 19(10Q23.31) WILD-TYPE       13        17       12
D47V11, multiclass
           clus
vv          DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE
  STAGE II                         13                              13
  STAGE III                        10                              17
  STAGE IV                         14                              12

Clustering(48) Variable = Del Peak 20(11p15.5)
D48V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 20(11P15.5) CNV       44 16
  DEL PEAK 20(11P15.5) WILD-TYPE 48 16
      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                            60                             64 
      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                            16                             16 
$`DEL PEAK 20(11P15.5) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20T 
       12.79         2.66        19.00        26.10         5.06        14.89 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 
        5.06         8.35         4.64         8.98         1.94         2.01 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-DK-A1A5 
        0.46         0.43         0.69         7.20         5.46         2.14 
TCGA-DK-A1A7 TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A1AF TCGA-DK-A2HX TCGA-DK-A2I1 
        8.98         8.91       100.47         5.85         1.81        10.59 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ 
       75.32         2.20         3.98         7.82         8.22        10.49 
TCGA-DK-A3IS TCGA-DK-A3IT TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3SJ TCGA-FD-A3SL 
       37.84         5.52         8.94         4.01        24.30        10.98 
TCGA-FD-A3SN TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-G2-A2EO 
        6.81        19.79         1.94         7.89        15.16        32.78 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RD TCGA-GC-A3YS 
       20.12         0.82         2.86         2.24         1.02         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW 
        7.69         2.10         7.56         3.22         4.37         6.41 
TCGA-GV-A3QF TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WV 
        7.63         6.38         5.33         6.71         8.71         4.64 

$`DEL PEAK 20(11P15.5) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P 
        7.33         6.74         6.58        11.93        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-CU-A0YN 
       19.46         8.61         8.25         5.88         3.65        12.92 
TCGA-CU-A0YO TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1AA 
        4.90         5.19         8.09         2.53        31.40         7.04 
TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AG TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IU 
      118.88         7.17         6.64         7.76       123.85        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 
        9.67         8.28        10.55       131.15        36.43         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 
        8.81         8.32         6.87        11.05         8.94         7.96 
TCGA-FD-A3NA TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43U 
       32.02         6.12         5.49         4.54        46.78         6.84 
TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
        4.08         2.33        49.91        26.50         5.65        26.93 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC 
       17.26         7.04         1.32         4.50         1.38         2.50 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QH 
        3.12         5.82         6.38         6.15         5.69         7.79 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WU 
        4.11         6.64         1.51         3.42 

      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                        100.47                         131.15 
      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                         6.560                          7.105 
[1] "0.4 - 100.5 (6.6)" "0.1 - 131.2 (7.1)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
[1] "hr=" "1.3"
D48V2, continuous
D48V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 20(11P15.5) CNV         16   50
  DEL PEAK 20(11P15.5) WILD-TYPE   17   48
        clus
vv       DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE
  FEMALE                       16                             17
  MALE                         50                             48
D48V4, continuous
D48V5, continuous
D48V6, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 20(11P15.5) CNV       17  1 21
  DEL PEAK 20(11P15.5) WILD-TYPE 17  1 23
D48V7, multiclass
    clus
vv   DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE
  M0                       17                             17
  M1                        1                              1
  MX                       21                             23
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 20(11P15.5) CNV       20  3 10  1  4
  DEL PEAK 20(11P15.5) WILD-TYPE 25  6  4  2  4
D48V8, multiclass
D48V9, continuous
D48V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  DEL PEAK 20(11P15.5) CNV             13        12       14
  DEL PEAK 20(11P15.5) WILD-TYPE       13        15       12
D48V11, multiclass
           clus
vv          DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE
  STAGE II                        13                             13
  STAGE III                       12                             15
  STAGE IV                        14                             12

Clustering(49) Variable = Del Peak 21(11q25)
D49V1, survival
                              sevent
clus2                           0  1
  DEL PEAK 21(11Q25) CNV       29 10
  DEL PEAK 21(11Q25) WILD-TYPE 63 22
      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                          39                           85 
      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                          10                           22 
$`DEL PEAK 21(11Q25) CNV`
TCGA-BL-A0C8 TCGA-BT-A20J TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ 
       12.79        19.00         8.35         5.88         4.64         8.98 
TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-DK-A1A5 TCGA-DK-A1A6 
        0.43         0.69        12.92         5.46         2.14        31.40 
TCGA-DK-A1AB TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-E5-A2PC 
        8.91         7.82         8.22        10.49        37.84        36.43 
TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3SJ TCGA-FD-A43N TCGA-G2-A2ES TCGA-G2-A3IB 
        8.94         4.01        24.30         7.89        17.26         7.04 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP 
        0.82         2.86         1.02         1.08         7.69         2.10 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QK TCGA-GV-A40E 
        7.56         3.22         4.37         6.41         6.64         6.38 
TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WV 
        5.33         6.71         4.64 

$`DEL PEAK 21(11Q25) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20N 
        7.33         2.66         6.74         6.58        11.93        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U 
       12.16        17.85        19.46         5.06        14.89         8.61 
TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A2LD TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR 
        5.06         8.25         3.65         1.94         2.01         0.46 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A7 
        4.90         7.20         5.19         8.09         2.53         8.98 
TCGA-DK-A1AA TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG 
        7.04       118.88       100.47         7.17         5.85         6.64 
TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK 
        1.81        10.59         7.76       123.85        75.32         2.20 
TCGA-DK-A3IL TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX 
        3.98         5.52        11.51         9.67         8.28        10.55 
TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B8 
      131.15         0.10         8.81         8.32         6.87        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
        8.94         7.96        32.02        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43U 
        5.49         4.54        46.78        19.79         1.94         6.84 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK 
       15.16         4.08         2.33        49.91        26.50         5.65 
TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A3IE TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB 
       26.93        32.78        20.12         2.24         1.32         4.50 
TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JX 
        1.38         2.50         3.12         5.82         6.38         6.15 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-H4-A2HO TCGA-K4-A3WS 
        5.69         7.63         7.79         4.11         1.51         8.71 
TCGA-K4-A3WU 
        3.42 

      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                        0.43                         0.10 
      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                       37.84                       131.15 
      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                        6.71                         7.04 
[1] "0.4 - 37.8 (6.7)"  "0.1 - 131.2 (7.0)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
[1] "hr=" "1.3"
D49V2, continuous
D49V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 21(11Q25) CNV         10   32
  DEL PEAK 21(11Q25) WILD-TYPE   23   66
        clus
vv       DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE
  FEMALE                     10                           23
  MALE                       32                           66
D49V4, continuous
D49V5, continuous
D49V6, continuous
                              vv
clus                           M0 M1 MX
  DEL PEAK 21(11Q25) CNV       11  0 16
  DEL PEAK 21(11Q25) WILD-TYPE 23  2 28
D49V7, multiclass
    clus
vv   DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE
  M0                     11                           23
  M1                      0                            2
  MX                     16                           28
                              vv
clus                           N0 N1 N2 N3 NX
  DEL PEAK 21(11Q25) CNV       14  4  5  0  3
  DEL PEAK 21(11Q25) WILD-TYPE 31  5  9  3  5
D49V8, multiclass
D49V9, continuous
D49V10, continuous
                              vv
clus                           STAGE II STAGE III STAGE IV
  DEL PEAK 21(11Q25) CNV             10         9        8
  DEL PEAK 21(11Q25) WILD-TYPE       16        18       18
D49V11, multiclass
           clus
vv          DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE
  STAGE II                      10                           16
  STAGE III                      9                           18
  STAGE IV                       8                           18

Clustering(50) Variable = Del Peak 22(13q14.2)
D50V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 22(13Q14.2) CNV       32 17
  DEL PEAK 22(13Q14.2) WILD-TYPE 60 15
      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                            49                             75 
      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                            17                             15 
$`DEL PEAK 22(13Q14.2) CNV`
TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20V 
        2.66         6.74        26.10         5.06        14.89         5.06 
TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HS 
        8.25         5.88         4.64         8.98         1.94         0.43 
TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE 
        5.19         2.53         8.98       118.88       100.47         7.17 
TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM 
        1.81         7.76       123.85        75.32         2.20         7.82 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IV TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B5 
        8.22        10.49         9.67        36.43         8.81         8.94 
TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-FD-A3SN TCGA-FD-A3SQ 
        6.87         4.01         8.94        24.30         6.81        46.78 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FJ-A3ZF TCGA-G2-A2EO TCGA-G2-A2ES TCGA-GC-A3BM 
       19.79         1.94         4.08        32.78        17.26         2.86 
TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GV-A3JW TCGA-GV-A3JX 
        1.32         4.50         1.08         2.10         6.41         6.15 
TCGA-GV-A3QI 
        4.11 

$`DEL PEAK 22(13Q14.2) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20O 
       12.79         7.33         6.58        11.93        19.00        12.16 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20W TCGA-BT-A2LD TCGA-C4-A0F6 
       17.85        19.46         8.61         8.35         3.65         2.01 
TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ 
        0.46         0.69        12.92         4.90         7.20         5.46 
TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AF 
        8.09         2.14        31.40         7.04         8.91         5.85 
TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A3IL TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
        6.64        10.59         3.98        37.84         5.52        11.51 
TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B8 
        8.28        10.55       131.15         0.10         8.32        11.05 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP 
        7.96        32.02        10.98         6.12         5.49         4.54 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ 
        7.89         6.84        15.16         2.33        49.91        26.50 
TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3I6 
        5.65        26.93         7.04        20.12         0.82         2.24 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GD-A3OS 
        1.38         1.02         2.50         7.69         3.12         5.82 
TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A3QF 
        6.38         7.56         3.22         4.37         5.69         7.63 
TCGA-GV-A3QH TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ 
        7.79         6.64         6.38         5.33         1.51         6.71 
TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        8.71         3.42         4.64 

      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                        123.85                         131.15 
      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                          6.87                           7.04 
[1] "0.4 - 123.8 (6.9)" "0.1 - 131.2 (7.0)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
[1] "hr=" "1.4"
D50V2, continuous
D50V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 22(13Q14.2) CNV         10   41
  DEL PEAK 22(13Q14.2) WILD-TYPE   23   57
        clus
vv       DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE
  FEMALE                       10                             23
  MALE                         41                             57
D50V4, continuous
D50V5, continuous
D50V6, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 22(13Q14.2) CNV       13  0 18
  DEL PEAK 22(13Q14.2) WILD-TYPE 21  2 26
D50V7, multiclass
    clus
vv   DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE
  M0                       13                             21
  M1                        0                              2
  MX                       18                             26
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 22(13Q14.2) CNV       16  4  7  1  3
  DEL PEAK 22(13Q14.2) WILD-TYPE 29  5  7  2  5
D50V8, multiclass
D50V9, continuous
D50V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  DEL PEAK 22(13Q14.2) CNV              7        11       12
  DEL PEAK 22(13Q14.2) WILD-TYPE       19        16       14
D50V11, multiclass
           clus
vv          DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE
  STAGE II                         7                             19
  STAGE III                       11                             16
  STAGE IV                        12                             14

Clustering(51) Variable = Del Peak 23(14q12)
D51V1, survival
                              sevent
clus2                           0  1
  DEL PEAK 23(14Q12) CNV       26  9
  DEL PEAK 23(14Q12) WILD-TYPE 66 23
      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                          35                           89 
      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                           9                           23 
$`DEL PEAK 23(14Q12) CNV`
TCGA-BT-A20J TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A2LD TCGA-CF-A1HR TCGA-CU-A0YO 
       19.00        14.89         5.06         3.65         0.46         4.90 
TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2I1 
        5.19         2.53         2.14       118.88       100.47        10.59 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-FD-A3B5 TCGA-FD-A3SP 
       75.32         2.20        10.49        37.84         8.94         4.54 
TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF 
       46.78        19.79         6.84        15.16         4.08        49.91 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GU-A42Q TCGA-GV-A3JZ 
       20.12         0.82         4.50         1.02         7.56         5.69 
TCGA-GV-A3QF TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HQ TCGA-K4-A3WU 
        7.63         6.64         6.38         6.71         3.42 

$`DEL PEAK 23(14Q12) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U 
       26.10        12.16        17.85        19.46         5.06         8.61 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 
        8.35         8.25         5.88         4.64         8.98         1.94 
TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3KJ 
        2.01         0.43         0.69        12.92         7.20         5.46 
TCGA-CU-A3YL TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE 
        8.09        31.40         8.98         7.04         8.91         7.17 
TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL 
        5.85         6.64         1.81         7.76       123.85         3.98 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW 
        7.82         8.22         5.52        11.51         9.67         8.28 
TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 
       10.55       131.15        36.43         0.10         8.81         8.32 
TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA 
        6.87         4.01        11.05         8.94         7.96        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SS 
       24.30        10.98         6.12         6.81         5.49         1.94 
TCGA-FD-A43N TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO 
        7.89         2.33        26.50         5.65        26.93        32.78 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RC 
       17.26         7.04         2.86         2.24         1.32         1.38 
TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS 
        2.50         1.08         7.69         2.10         3.12         5.82 
TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3QH 
        6.38         3.22         4.37         6.41         6.15         7.79 
TCGA-GV-A3QI TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WV 
        4.11         5.33         1.51         8.71         4.64 

      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                        0.46                         0.10 
      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                      118.88                       131.15 
      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                        6.71                         7.04 
[1] "0.5 - 118.9 (6.7)" "0.1 - 131.2 (7.0)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
[1] "hr=" "1.4"
D51V2, continuous
D51V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 23(14Q12) CNV          6   31
  DEL PEAK 23(14Q12) WILD-TYPE   27   67
        clus
vv       DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE
  FEMALE                      6                           27
  MALE                       31                           67
D51V4, continuous
D51V5, continuous
D51V6, continuous
                              vv
clus                           M0 M1 MX
  DEL PEAK 23(14Q12) CNV       11  0 12
  DEL PEAK 23(14Q12) WILD-TYPE 23  2 32
D51V7, multiclass
    clus
vv   DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE
  M0                     11                           23
  M1                      0                            2
  MX                     12                           32
                              vv
clus                           N0 N1 N2 N3 NX
  DEL PEAK 23(14Q12) CNV        9  3  8  1  2
  DEL PEAK 23(14Q12) WILD-TYPE 36  6  6  2  6
D51V8, multiclass
D51V9, continuous
D51V10, continuous
                              vv
clus                           STAGE II STAGE III STAGE IV
  DEL PEAK 23(14Q12) CNV              5         6       11
  DEL PEAK 23(14Q12) WILD-TYPE       21        21       15
D51V11, multiclass
           clus
vv          DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE
  STAGE II                       5                           21
  STAGE III                      6                           21
  STAGE IV                      11                           15

Clustering(52) Variable = Del Peak 24(14q32.31)
D52V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 24(14Q32.31) CNV       29  7
  DEL PEAK 24(14Q32.31) WILD-TYPE 63 25
      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                             36                              88 
      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                              7                              25 
$`DEL PEAK 24(14Q32.31) CNV`
TCGA-BT-A20J TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LD TCGA-CF-A1HR 
       19.00        14.89         5.06         8.35         3.65         0.46 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1AC TCGA-DK-A2I1 
        4.90         7.20         2.53         2.14       118.88        10.59 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IQ TCGA-FD-A3B6 TCGA-FD-A3SN TCGA-FD-A3SP 
       75.32         2.20        10.49         6.87         6.81         4.54 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A3IE 
        7.89         6.84        15.16         4.08        49.91        20.12 
TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GU-A42Q TCGA-GV-A3JX TCGA-GV-A3JZ 
        4.50         1.02         1.08         7.56         6.15         5.69 
TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WU 
        7.63         4.11         6.38         5.33         6.71         3.42 

$`DEL PEAK 24(14Q32.31) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U 
       26.10        12.16        17.85        19.46         5.06         8.61 
TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 
        8.25         5.88         4.64         8.98         1.94         2.01 
TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL 
        0.43         0.69        12.92         5.46         5.19         8.09 
TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A1AE 
       31.40         8.98         7.04         8.91       100.47         7.17 
TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL 
        5.85         6.64         1.81         7.76       123.85         3.98 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV 
        7.82         8.22        37.84         5.52        11.51         9.67 
TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 
        8.28        10.55       131.15        36.43         0.10         8.81 
TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 
        8.32         8.94         4.01        11.05         8.94         7.96 
TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SQ 
       32.02        24.30        10.98         6.12         5.49        46.78 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
       19.79         1.94         2.33        26.50         5.65        26.93 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 
       32.78        17.26         7.04         0.82         2.86         2.24 
TCGA-GC-A3OO TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ 
        1.32         1.38         2.50         7.69         2.10         3.12 
TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QH 
        5.82         6.38         3.22         4.37         6.41         7.79 
TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WV 
        6.64         1.51         8.71         4.64 

      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                           0.46                            0.10 
      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                         118.88                          131.15 
      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                          6.545                           7.510 
[1] "0.5 - 118.9 (6.5)" "0.1 - 131.2 (7.5)"
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
[1] "hr=" "1.2"
D52V2, continuous
D52V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 24(14Q32.31) CNV          5   33
  DEL PEAK 24(14Q32.31) WILD-TYPE   28   65
        clus
vv       DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE
  FEMALE                         5                              28
  MALE                          33                              65
D52V4, continuous
D52V5, continuous
D52V6, continuous
                                 vv
clus                              M0 M1 MX
  DEL PEAK 24(14Q32.31) CNV        8  0 16
  DEL PEAK 24(14Q32.31) WILD-TYPE 26  2 28
D52V7, multiclass
    clus
vv   DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE
  M0                         8                              26
  M1                         0                               2
  MX                        16                              28
                                 vv
clus                              N0 N1 N2 N3 NX
  DEL PEAK 24(14Q32.31) CNV       14  2  5  1  2
  DEL PEAK 24(14Q32.31) WILD-TYPE 31  7  9  2  6
D52V8, multiclass
D52V9, continuous
D52V10, continuous
                                 vv
clus                              STAGE II STAGE III STAGE IV
  DEL PEAK 24(14Q32.31) CNV              5         9        8
  DEL PEAK 24(14Q32.31) WILD-TYPE       21        18       18
D52V11, multiclass
           clus
vv          DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE
  STAGE II                          5                              21
  STAGE III                         9                              18
  STAGE IV                          8                              18

Clustering(53) Variable = Del Peak 25(15q13.1)
D53V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 25(15Q13.1) CNV       36 11
  DEL PEAK 25(15Q13.1) WILD-TYPE 56 21
      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                            47                             77 
      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                            11                             21 
$`DEL PEAK 25(15Q13.1) CNV`
TCGA-BL-A0C8 TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20W TCGA-BT-A20X 
       12.79         6.58        19.00        26.10         8.35         8.25 
TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CU-A0YR TCGA-CU-A3QU TCGA-DK-A1A6 
        3.65         8.98         1.94         7.20         5.19        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IM 
        8.98       100.47         1.81         7.76       123.85         7.82 
TCGA-DK-A3IN TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SJ 
        8.22        36.43         8.81         8.94        32.02        24.30 
TCGA-FD-A3SN TCGA-FD-A3SP TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF 
        6.81         4.54         7.89        15.16         4.08        49.91 
TCGA-G2-A2EL TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RD 
       26.93        20.12         0.82         1.32         4.50         1.02 
TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GU-A42P TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3QF 
        1.08         2.10         6.38         6.41         6.15         7.63 
TCGA-GV-A3QH TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WS 
        7.79         6.38         5.33         6.71         8.71 

$`DEL PEAK 25(15Q13.1) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P 
        7.33         2.66         6.74        11.93        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A2LA 
       19.46         5.06        14.89         8.61         5.06         5.88 
TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN 
        4.64         2.01         0.46         0.43         0.69        12.92 
TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1AA 
        4.90         5.46         8.09         2.53         2.14         7.04 
TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 
        8.91       118.88         7.17         5.85         6.64        10.59 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT 
       75.32         2.20         3.98        10.49        37.84         5.52 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 
       11.51         9.67         8.28        10.55       131.15         0.10 
TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 
        8.32         8.94         6.87         4.01        11.05         7.96 
TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS 
       10.98         6.12         5.49        46.78        19.79         1.94 
TCGA-FD-A43U TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES 
        6.84         2.33        26.50         5.65        32.78        17.26 
TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A2C5 
        7.04         2.86         2.24         1.38         2.50         7.69 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JZ 
        3.12         5.82         7.56         3.22         4.37         5.69 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WU TCGA-K4-A3WV 
        4.11         6.64         1.51         3.42         4.64 

      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                          0.82                           0.10 
      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                        123.85                         131.15 
      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                          7.79                           6.64 
[1] "0.8 - 123.8 (7.8)" "0.1 - 131.2 (6.6)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
[1] "hr=" "1.6"
D53V2, continuous
D53V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 25(15Q13.1) CNV         10   39
  DEL PEAK 25(15Q13.1) WILD-TYPE   23   59
        clus
vv       DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE
  FEMALE                       10                             23
  MALE                         39                             59
D53V4, continuous
D53V5, continuous
D53V6, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 25(15Q13.1) CNV       10  0 21
  DEL PEAK 25(15Q13.1) WILD-TYPE 24  2 23
D53V7, multiclass
    clus
vv   DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE
  M0                       10                             24
  M1                        0                              2
  MX                       21                             23
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 25(15Q13.1) CNV       16  5  5  1  4
  DEL PEAK 25(15Q13.1) WILD-TYPE 29  4  9  2  4
D53V8, multiclass
D53V9, continuous
D53V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  DEL PEAK 25(15Q13.1) CNV              9        11       11
  DEL PEAK 25(15Q13.1) WILD-TYPE       17        16       15
D53V11, multiclass
           clus
vv          DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE
  STAGE II                         9                             17
  STAGE III                       11                             16
  STAGE IV                        11                             15

Clustering(54) Variable = Del Peak 26(16p13.3)
D54V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 26(16P13.3) CNV       34 13
  DEL PEAK 26(16P13.3) WILD-TYPE 58 19
      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                            47                             77 
      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                            13                             19 
$`DEL PEAK 26(16P13.3) CNV`
TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20W TCGA-BT-A2LA 
        2.66         6.58        26.10         5.06         8.35         5.88 
TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-CU-A3QU 
        4.64         2.01         0.43        12.92         5.46         5.19 
TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A2HX TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK 
        2.53         8.98         1.81       123.85        75.32         2.20 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WX TCGA-FD-A3B3 
        7.82         8.22         5.52         9.67        10.55         8.81 
TCGA-FD-A3B6 TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
        6.87         4.54        19.79         7.89         6.84        15.16 
TCGA-G2-A2EF TCGA-G2-A2EL TCGA-G2-A3IE TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD 
       49.91        26.93        20.12         4.50         1.38         1.02 
TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JW 
        1.08         7.69         2.10         6.38         3.22         6.41 
TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QH TCGA-H4-A2HQ TCGA-K4-A3WS 
        6.15         5.69         7.79         6.71         8.71 

$`DEL PEAK 26(16P13.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20O 
       12.79         7.33         6.74        11.93        19.00        12.16 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20X 
       17.85        19.46        14.89         8.61         5.06         8.25 
TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YO 
        3.65         8.98         1.94         0.46         0.69         4.90 
TCGA-CU-A0YR TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB 
        7.20         8.09         2.14        31.40         7.04         8.91 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 
      118.88       100.47         7.17         5.85         6.64        10.59 
TCGA-DK-A2I2 TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3WW 
        7.76         3.98        10.49        37.84        11.51         8.28 
TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B7 
      131.15        36.43         0.10         8.32         8.94         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL 
       11.05         8.94         7.96        32.02        24.30        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A3SS TCGA-FJ-A3ZF 
        6.12         6.81         5.49        46.78         1.94         4.08 
TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB 
        2.33        26.50         5.65        32.78        17.26         7.04 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3WC TCGA-GD-A3OQ 
        0.82         2.86         2.24         1.32         2.50         3.12 
TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A3QK 
        5.82         7.56         4.37         7.63         4.11         6.64 
TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WU TCGA-K4-A3WV 
        6.38         5.33         1.51         3.42         4.64 

      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                        123.85                         131.15 
      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                          6.58                           7.20 
[1] "0.4 - 123.8 (6.6)" "0.1 - 131.2 (7.2)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
[1] "hr=" "1.3"
D54V2, continuous
D54V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 26(16P13.3) CNV         11   37
  DEL PEAK 26(16P13.3) WILD-TYPE   22   61
        clus
vv       DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE
  FEMALE                       11                             22
  MALE                         37                             61
D54V4, continuous
D54V5, continuous
D54V6, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 26(16P13.3) CNV       13  0 18
  DEL PEAK 26(16P13.3) WILD-TYPE 21  2 26
D54V7, multiclass
    clus
vv   DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE
  M0                       13                             21
  M1                        0                              2
  MX                       18                             26
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 26(16P13.3) CNV       15  3  7  1  4
  DEL PEAK 26(16P13.3) WILD-TYPE 30  6  7  2  4
D54V8, multiclass
D54V9, continuous
D54V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  DEL PEAK 26(16P13.3) CNV              7        13       10
  DEL PEAK 26(16P13.3) WILD-TYPE       19        14       16
D54V11, multiclass
           clus
vv          DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE
  STAGE II                         7                             19
  STAGE III                       13                             14
  STAGE IV                        10                             16

Clustering(55) Variable = Del Peak 27(16q23.1)
D55V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 27(16Q23.1) CNV       29  7
  DEL PEAK 27(16Q23.1) WILD-TYPE 63 25
      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                            36                             88 
      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                             7                             25 
$`DEL PEAK 27(16Q23.1) CNV`
TCGA-BL-A0C8 TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1AC TCGA-DK-A2HX 
       12.79        12.92         5.19         2.53       118.88         1.81 
TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IN TCGA-DK-A3IV 
       10.59         7.76       123.85        75.32         8.22         9.67 
TCGA-DK-A3WW TCGA-FD-A3B5 TCGA-FD-A3N5 TCGA-FD-A3SO TCGA-FD-A3SS TCGA-FD-A43N 
        8.28         8.94         8.94         5.49         1.94         7.89 
TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A3IE TCGA-GC-A3RC 
        6.84        15.16        49.91        26.50        20.12         1.38 
TCGA-GC-A3RD TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3JX 
        1.02         2.10         6.38         7.56         4.37         6.15 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-H4-A2HQ TCGA-K4-A3WV 
        5.69         7.63         7.79         4.11         6.71         4.64 

$`DEL PEAK 27(16Q23.1) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
        7.33         2.66         6.74         6.58        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T 
       26.10        12.16        17.85        19.46         5.06        14.89 
TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD 
        8.61         5.06         8.35         8.25         5.88         3.65 
TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS 
        4.64         8.98         1.94         2.01         0.46         0.43 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A5 
        0.69         4.90         7.20         5.46         8.09         2.14 
TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A1AE 
       31.40         8.98         7.04         8.91       100.47         7.17 
TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IQ 
        5.85         6.64         2.20         3.98         7.82        10.49 
TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC 
       37.84         5.52        11.51        10.55       131.15        36.43 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        0.10         8.81         8.32         6.87         4.01        11.05 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
        7.96        32.02        24.30        10.98         6.12         6.81 
TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EK 
        4.54        46.78        19.79         4.08         2.33         5.65 
TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM 
       26.93        32.78        17.26         7.04         0.82         2.86 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 
        2.24         1.32         4.50         2.50         1.08         7.69 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3QK TCGA-GV-A40E 
        3.12         5.82         3.22         6.41         6.64         6.38 
TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        5.33         1.51         8.71         3.42 

      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                          1.02                           0.10 
      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                        123.85                         131.15 
      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                         7.695                          6.775 
[1] "1.0 - 123.8 (7.7)" "0.1 - 131.2 (6.8)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
[1] "hr=" "1.7"
D55V2, continuous
D55V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 27(16Q23.1) CNV          8   29
  DEL PEAK 27(16Q23.1) WILD-TYPE   25   69
        clus
vv       DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE
  FEMALE                        8                             25
  MALE                         29                             69
D55V4, continuous
D55V5, continuous
D55V6, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 27(16Q23.1) CNV        9  0 17
  DEL PEAK 27(16Q23.1) WILD-TYPE 25  2 27
D55V7, multiclass
    clus
vv   DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE
  M0                        9                             25
  M1                        0                              2
  MX                       17                             27
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 27(16Q23.1) CNV       11  5  5  2  3
  DEL PEAK 27(16Q23.1) WILD-TYPE 34  4  9  1  5
D55V8, multiclass
D55V9, continuous
D55V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  DEL PEAK 27(16Q23.1) CNV              6         8       11
  DEL PEAK 27(16Q23.1) WILD-TYPE       20        19       15
D55V11, multiclass
           clus
vv          DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE
  STAGE II                         6                             20
  STAGE III                        8                             19
  STAGE IV                        11                             15

Clustering(56) Variable = Del Peak 28(17p12)
D56V1, survival
                              sevent
clus2                           0  1
  DEL PEAK 28(17P12) CNV       47 18
  DEL PEAK 28(17P12) WILD-TYPE 45 14
      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                          65                           59 
      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                          18                           14 
$`DEL PEAK 28(17P12) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20P TCGA-BT-A20Q 
       12.79         2.66        19.00        26.10        17.85        19.46 
TCGA-BT-A20T TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 
       14.89         8.25         5.88         4.64         8.98         1.94 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A3KJ TCGA-DK-A1A5 TCGA-DK-A1A6 
        0.46         0.43         0.69         5.46         2.14        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I1 
        8.98         8.91       118.88       100.47         1.81        10.59 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS 
       75.32         2.20         3.98         8.22        10.49        37.84 
TCGA-DK-A3IT TCGA-DK-A3IV TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3NA 
        5.52         9.67        36.43         8.32         8.94        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A3SS TCGA-FD-A43N 
       24.30         6.81         5.49        46.78         1.94         7.89 
TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A2EO 
        6.84        15.16        49.91        26.50        26.93        32.78 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3YS 
       20.12         0.82         2.86         4.50         1.02         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JZ 
        7.69         2.10         6.38         7.56         3.22         5.69 
TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ 
        7.63         7.79         6.38         5.33         6.71 

$`DEL PEAK 28(17P12) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20R 
        7.33         6.74         6.58        11.93        12.16         5.06 
TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LD TCGA-C4-A0F6 TCGA-CU-A0YN 
        8.61         5.06         8.35         3.65         2.01        12.92 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1AA 
        4.90         7.20         5.19         8.09         2.53         7.04 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IM 
        7.17         5.85         6.64         7.76       123.85         7.82 
TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 
       11.51         8.28        10.55       131.15         0.10         8.81 
TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SL 
        6.87         4.01        11.05         8.94         7.96        10.98 
TCGA-FD-A3SM TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EK 
        6.12         4.54        19.79         4.08         2.33         5.65 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RC TCGA-GC-A3WC 
       17.26         7.04         2.24         1.32         1.38         2.50 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3QI 
        3.12         5.82         4.37         6.41         6.15         4.11 
TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        6.64         1.51         8.71         3.42         4.64 

      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                        0.43                         0.10 
      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                      118.88                       131.15 
      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                        7.79                         6.64 
[1] "0.4 - 118.9 (7.8)" "0.1 - 131.2 (6.6)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
[1] "hr=" "1.8"
D56V2, continuous
D56V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 28(17P12) CNV         15   53
  DEL PEAK 28(17P12) WILD-TYPE   18   45
        clus
vv       DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE
  FEMALE                     15                           18
  MALE                       53                           45
D56V4, continuous
D56V5, continuous
D56V6, continuous
                              vv
clus                           M0 M1 MX
  DEL PEAK 28(17P12) CNV       15  0 23
  DEL PEAK 28(17P12) WILD-TYPE 19  2 21
D56V7, multiclass
    clus
vv   DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE
  M0                     15                           19
  M1                      0                            2
  MX                     23                           21
                              vv
clus                           N0 N1 N2 N3 NX
  DEL PEAK 28(17P12) CNV       16  5 10  2  4
  DEL PEAK 28(17P12) WILD-TYPE 29  4  4  1  4
D56V8, multiclass
D56V9, continuous
D56V10, continuous
                              vv
clus                           STAGE II STAGE III STAGE IV
  DEL PEAK 28(17P12) CNV             12         9       17
  DEL PEAK 28(17P12) WILD-TYPE       14        18        9
D56V11, multiclass
           clus
vv          DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE
  STAGE II                      12                           14
  STAGE III                      9                           18
  STAGE IV                      17                            9

Clustering(57) Variable = Del Peak 29(18q23)
D57V1, survival
                              sevent
clus2                           0  1
  DEL PEAK 29(18Q23) CNV       40 12
  DEL PEAK 29(18Q23) WILD-TYPE 52 20
      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                          52                           72 
      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                          12                           20 
$`DEL PEAK 29(18Q23) CNV`
TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20W TCGA-BT-A2LA 
       11.93        19.00        26.10         5.06         8.35         5.88 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR TCGA-DK-A1A5 TCGA-DK-A1A7 
        0.46         0.43        12.92         7.20         2.14         8.98 
TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A2HX 
        8.91       118.88       100.47         7.17         5.85         1.81 
TCGA-DK-A2I1 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN 
       10.59        75.32         2.20         3.98         7.82         8.22 
TCGA-DK-A3IS TCGA-DK-A3IT TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B7 TCGA-FD-A3NA 
       37.84         5.52        36.43         8.32         4.01        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SS 
       24.30         6.81         5.49         4.54        46.78         1.94 
TCGA-FD-A43N TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A3IE TCGA-GC-A3BM TCGA-GC-A3RC 
        7.89         4.08        49.91        20.12         2.86         1.38 
TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JW 
        1.02         1.08         2.10         5.82         6.38         6.41 
TCGA-GV-A3JX TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WS 
        6.15         5.33         6.71         8.71 

$`DEL PEAK 29(18Q23) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20O 
       12.79         7.33         2.66         6.74         6.58        12.16 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20X 
       17.85        19.46        14.89         8.61         5.06         8.25 
TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A27C 
        3.65         4.64         8.98         1.94         2.01         0.69 
TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 
        4.90         5.46         5.19         8.09         2.53        31.40 
TCGA-DK-A1AA TCGA-DK-A1AG TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IQ TCGA-DK-A3IU 
        7.04         6.64         7.76       123.85        10.49        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 
        9.67         8.28        10.55       131.15         0.10         8.81 
TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SL 
        8.94         6.87        11.05         8.94         7.96        10.98 
TCGA-FD-A3SM TCGA-FD-A3SR TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EJ 
        6.12        19.79         6.84        15.16         2.33        26.50 
TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY 
        5.65        26.93        32.78        17.26         7.04         0.82 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GD-A3OQ 
        2.24         1.32         4.50         2.50         7.69         3.12 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH 
        7.56         3.22         4.37         5.69         7.63         7.79 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO TCGA-K4-A3WU TCGA-K4-A3WV 
        4.11         6.64         6.38         1.51         3.42         4.64 

      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                        0.43                         0.10 
      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                      118.88                       131.15 
      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                        6.76                         7.04 
[1] "0.4 - 118.9 (6.8)" "0.1 - 131.2 (7.0)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZF 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FT-A3EE                   TCGA-G2-A2EF 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-G2-A2EJ                   TCGA-G2-A2EK 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2EL                   TCGA-G2-A2EO 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2ES                   TCGA-G2-A3IB 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A3IE                   TCGA-G2-A3VY 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3BM                   TCGA-GC-A3I6 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3OO                   TCGA-GC-A3RB 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3RC                   TCGA-GC-A3RD 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GC-A3WC                   TCGA-GC-A3YS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GD-A2C5                   TCGA-GD-A3OP 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GD-A3OQ                   TCGA-GD-A3OS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GU-A42P                   TCGA-GU-A42Q 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GU-A42R                   TCGA-GV-A3JV 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3JW                   TCGA-GV-A3JX 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GV-A3JZ                   TCGA-GV-A3QF 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3QH                   TCGA-GV-A3QI 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3QK                   TCGA-GV-A40E 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A40G                   TCGA-H4-A2HO 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-H4-A2HQ                   TCGA-K4-A3WS 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-K4-A3WU                   TCGA-K4-A3WV 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
[1] "hr=" "1.6"
D57V2, continuous
D57V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 29(18Q23) CNV         15   42
  DEL PEAK 29(18Q23) WILD-TYPE   18   56
        clus
vv       DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE
  FEMALE                     15                           18
  MALE                       42                           56
D57V4, continuous
D57V5, continuous
D57V6, continuous
                              vv
clus                           M0 M1 MX
  DEL PEAK 29(18Q23) CNV       15  0 20
  DEL PEAK 29(18Q23) WILD-TYPE 19  2 24
D57V7, multiclass
    clus
vv   DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE
  M0                     15                           19
  M1                      0                            2
  MX                     20                           24
                              vv
clus                           N0 N1 N2 N3 NX
  DEL PEAK 29(18Q23) CNV       20  4  6  1  4
  DEL PEAK 29(18Q23) WILD-TYPE 25  5  8  2  4
D57V8, multiclass
D57V9, continuous
D57V10, continuous
                              vv
clus                           STAGE II STAGE III STAGE IV
  DEL PEAK 29(18Q23) CNV             12        11       11
  DEL PEAK 29(18Q23) WILD-TYPE       14        16       15
D57V11, multiclass
           clus
vv          DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE
  STAGE II                      12                           14
  STAGE III                     11                           16
  STAGE IV                      11                           15

Clustering(58) Variable = Del Peak 30(19p13.3)
D58V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 30(19P13.3) CNV       37 13
  DEL PEAK 30(19P13.3) WILD-TYPE 55 19
      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                            50                             74 
      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                            13                             19 
$`DEL PEAK 30(19P13.3) CNV`
TCGA-BT-A20J TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LD 
       19.00         5.06        14.89         5.06         8.35         3.65 
TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-DK-A1A5 
        4.64         8.98         2.01         0.46         0.43         2.14 
TCGA-DK-A1A7 TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I6 TCGA-DK-A3IL 
        8.98         8.91       100.47         1.81        75.32         3.98 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IV TCGA-E5-A2PC TCGA-FD-A3B4 
        8.22        10.49         5.52         9.67        36.43         8.32 
TCGA-FD-A3B6 TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO 
        6.87        24.30        10.98         6.12         6.81         5.49 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2ES TCGA-G2-A3IB 
        1.94         7.89         4.08        49.91        17.26         7.04 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3RB TCGA-GC-A3YS TCGA-GU-A42P TCGA-GU-A42Q 
       20.12         0.82         4.50         1.08         6.38         7.56 
TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A40G TCGA-H4-A2HO 
        3.22         6.41         6.15         5.69         5.33         1.51 
TCGA-H4-A2HQ TCGA-K4-A3WS 
        6.71         8.71 

$`DEL PEAK 30(19P13.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20X 
       26.10        12.16        17.85        19.46         8.61         8.25 
TCGA-BT-A2LA TCGA-C4-A0F0 TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR 
        5.88         1.94         0.69        12.92         4.90         7.20 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1AA 
        5.46         5.19         8.09         2.53        31.40         7.04 
TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A2I2 
      118.88         7.17         5.85         6.64        10.59         7.76 
TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3WW 
      123.85         2.20         7.82        37.84        11.51         8.28 
TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B7 
       10.55       131.15         0.10         8.81         8.94         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SP TCGA-FD-A3SQ 
       11.05         8.94         7.96        32.02         4.54        46.78 
TCGA-FD-A3SR TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK 
       19.79         6.84        15.16         2.33        26.50         5.65 
TCGA-G2-A2EL TCGA-G2-A2EO TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RC 
       26.93        32.78         2.86         2.24         1.32         1.38 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS 
        1.02         2.50         7.69         2.10         3.12         5.82 
TCGA-GV-A3JV TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E 
        4.37         7.63         7.79         4.11         6.64         6.38 
TCGA-K4-A3WU TCGA-K4-A3WV 
        3.42         4.64 

      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                        100.47                         131.15 
      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                         6.560                          7.265 
[1] "0.4 - 100.5 (6.6)" "0.1 - 131.2 (7.3)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
[1] "hr=" "1.2"
D58V2, continuous
D58V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 30(19P13.3) CNV         13   38
  DEL PEAK 30(19P13.3) WILD-TYPE   20   60
        clus
vv       DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE
  FEMALE                       13                             20
  MALE                         38                             60
D58V4, continuous
D58V5, continuous
D58V6, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 30(19P13.3) CNV       11  2 18
  DEL PEAK 30(19P13.3) WILD-TYPE 23  0 26
D58V7, multiclass
    clus
vv   DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE
  M0                       11                             23
  M1                        2                              0
  MX                       18                             26
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 30(19P13.3) CNV       14  5  5  2  4
  DEL PEAK 30(19P13.3) WILD-TYPE 31  4  9  1  4
D58V8, multiclass
D58V9, continuous
D58V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  DEL PEAK 30(19P13.3) CNV              9        10       13
  DEL PEAK 30(19P13.3) WILD-TYPE       17        17       13
D58V11, multiclass
           clus
vv          DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE
  STAGE II                         9                             17
  STAGE III                       10                             17
  STAGE IV                        13                             13

Clustering(59) Variable = Del Peak 31(22q13.32)
D59V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 31(22Q13.32) CNV       38 14
  DEL PEAK 31(22Q13.32) WILD-TYPE 54 18
      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                             52                              72 
      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                             14                              18 
$`DEL PEAK 31(22Q13.32) CNV`
TCGA-BL-A13J TCGA-BT-A20J TCGA-BT-A20R TCGA-BT-A20V TCGA-BT-A20W TCGA-C4-A0EZ 
        2.66        19.00         5.06         5.06         8.35         8.98 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A7 TCGA-DK-A1AC 
        1.94         2.01        12.92         5.19         8.98       118.88 
TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN 
        1.81         7.76       123.85         3.98         7.82         8.22 
TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 
       10.49         5.52        36.43         8.81         8.32         8.94 
TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SN 
        6.87         8.94        32.02        24.30        10.98         6.81 
TCGA-FD-A3SO TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
        5.49        19.79         1.94         7.89         6.84        15.16 
TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3RC 
        4.08        49.91         7.04        20.12         0.82         1.38 
TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42Q TCGA-GV-A3JX TCGA-GV-A40E 
        1.08         7.69         2.10         7.56         6.15         6.38 
TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        5.33         6.71         8.71         3.42 

$`DEL PEAK 31(22Q13.32) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20N 
       12.79         7.33         6.74         6.58        11.93        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20X 
       12.16        17.85        19.46        14.89         8.61         8.25 
TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C 
        5.88         3.65         4.64         0.46         0.43         0.69 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 
        4.90         7.20         5.46         8.09         2.53         2.14 
TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF 
       31.40         7.04         8.91       100.47         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IS TCGA-DK-A3IU 
        6.64        10.59        75.32         2.20        37.84        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B7 
        9.67         8.28        10.55       131.15         0.10         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3SM TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FT-A3EE 
       11.05         7.96         6.12         4.54        46.78         2.33 
TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-GC-A3BM 
       26.50         5.65        26.93        32.78        17.26         2.86 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GD-A3OQ 
        2.24         1.32         4.50         1.02         2.50         3.12 
TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JZ 
        5.82         6.38         3.22         4.37         6.41         5.69 
TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WV 
        7.63         7.79         4.11         6.64         1.51         4.64 

      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                           0.82                            0.10 
      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                         123.85                          131.15 
      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                          7.625                           6.640 
[1] "0.8 - 123.8 (7.6)" "0.1 - 131.2 (6.6)"
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZF 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FT-A3EE                      TCGA-G2-A2EF 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-G2-A2EJ                      TCGA-G2-A2EK 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2EL                      TCGA-G2-A2EO 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2ES                      TCGA-G2-A3IB 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-G2-A3IE                      TCGA-G2-A3VY 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GC-A3BM                      TCGA-GC-A3I6 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3OO                      TCGA-GC-A3RB 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3RC                      TCGA-GC-A3RD 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3WC                      TCGA-GC-A3YS 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GD-A2C5                      TCGA-GD-A3OP 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GD-A3OQ                      TCGA-GD-A3OS 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GU-A42P                      TCGA-GU-A42Q 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GU-A42R                      TCGA-GV-A3JV 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3JW                      TCGA-GV-A3JX 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GV-A3JZ                      TCGA-GV-A3QF 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3QH                      TCGA-GV-A3QI 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3QK                      TCGA-GV-A40E 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GV-A40G                      TCGA-H4-A2HO 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-H4-A2HQ                      TCGA-K4-A3WS 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-K4-A3WU                      TCGA-K4-A3WV 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
[1] "hr=" "1"  
D59V2, continuous
D59V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 31(22Q13.32) CNV         14   39
  DEL PEAK 31(22Q13.32) WILD-TYPE   19   59
        clus
vv       DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE
  FEMALE                        14                              19
  MALE                          39                              59
D59V4, continuous
D59V5, continuous
D59V6, continuous
                                 vv
clus                              M0 M1 MX
  DEL PEAK 31(22Q13.32) CNV       11  1 24
  DEL PEAK 31(22Q13.32) WILD-TYPE 23  1 20
D59V7, multiclass
    clus
vv   DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE
  M0                        11                              23
  M1                         1                               1
  MX                        24                              20
                                 vv
clus                              N0 N1 N2 N3 NX
  DEL PEAK 31(22Q13.32) CNV       20  5  7  1  3
  DEL PEAK 31(22Q13.32) WILD-TYPE 25  4  7  2  5
D59V8, multiclass
D59V9, continuous
D59V10, continuous
                                 vv
clus                              STAGE II STAGE III STAGE IV
  DEL PEAK 31(22Q13.32) CNV             10        12       14
  DEL PEAK 31(22Q13.32) WILD-TYPE       16        15       12
D59V11, multiclass
           clus
vv          DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE
  STAGE II                         10                              16
  STAGE III                        12                              15
  STAGE IV                         14                              12

Clustering(60) Variable = Del Peak 32(Xp11.3)
D60V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 32(XP11.3) CNV       23 10
  DEL PEAK 32(XP11.3) WILD-TYPE 69 22
      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                           33                            91 
      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                           10                            22 
$`DEL PEAK 32(XP11.3) CNV`
TCGA-BL-A13J TCGA-BT-A20P TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A3PH TCGA-CF-A27C 
        2.66        17.85        14.89         5.06         4.64         0.69 
TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD 
       12.92         5.19         2.14         7.04         8.91       100.47 
TCGA-DK-A1AG TCGA-DK-A2I6 TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IV TCGA-E5-A2PC 
        6.64        75.32        37.84         5.52         9.67        36.43 
TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3SN TCGA-FD-A3SR TCGA-FD-A3SS TCGA-G2-A2EL 
        8.32         6.87         6.81        19.79         1.94        26.93 
TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GD-A3OS TCGA-GV-A3JX TCGA-GV-A3QH 
        7.04         0.82         2.86         5.82         6.15         7.79 
TCGA-GV-A3QI TCGA-H4-A2HQ TCGA-K4-A3WS 
        4.11         6.71         8.71 

$`DEL PEAK 32(XP11.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         6.74         6.58        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20W 
       26.10        12.16        19.46         5.06         8.61         8.35 
TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 
        8.25         5.88         3.65         8.98         1.94         2.01 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL 
        0.46         0.43         4.90         7.20         5.46         8.09 
TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF 
        2.53        31.40         8.98       118.88         7.17         5.85 
TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IL 
        1.81        10.59         7.76       123.85         2.20         3.98 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX 
        7.82         8.22        10.49        11.51         8.28        10.55 
TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3B8 
      131.15         0.10         8.81         8.94         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM 
        8.94         7.96        32.02        24.30        10.98         6.12 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
        5.49         4.54        46.78         7.89         6.84        15.16 
TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO 
        4.08         2.33        49.91        26.50         5.65        32.78 
TCGA-G2-A2ES TCGA-G2-A3IE TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC 
       17.26        20.12         2.24         1.32         4.50         1.38 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ 
        1.02         2.50         1.08         7.69         2.10         3.12 
TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JZ 
        6.38         7.56         3.22         4.37         6.41         5.69 
TCGA-GV-A3QF TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WU 
        7.63         6.64         6.38         5.33         1.51         3.42 
TCGA-K4-A3WV 
        4.64 

      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                         0.69                          0.10 
      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                       100.47                        131.15 
      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                         6.87                          7.17 
[1] "0.7 - 100.5 (6.9)" "0.1 - 131.2 (7.2)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FT-A3EE                    TCGA-G2-A2EF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2EJ                    TCGA-G2-A2EK 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2EL                    TCGA-G2-A2EO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2ES                    TCGA-G2-A3IB 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-G2-A3IE                    TCGA-G2-A3VY 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GC-A3BM                    TCGA-GC-A3I6 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3OO                    TCGA-GC-A3RB 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3RC                    TCGA-GC-A3RD 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3WC                    TCGA-GC-A3YS 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GD-A2C5                    TCGA-GD-A3OP 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GD-A3OQ                    TCGA-GD-A3OS 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GU-A42P                    TCGA-GU-A42Q 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GU-A42R                    TCGA-GV-A3JV 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3JW                    TCGA-GV-A3JX 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GV-A3JZ                    TCGA-GV-A3QF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3QH                    TCGA-GV-A3QI 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GV-A3QK                    TCGA-GV-A40E 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A40G                    TCGA-H4-A2HO 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-H4-A2HQ                    TCGA-K4-A3WS 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-K4-A3WU                    TCGA-K4-A3WV 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
[1] "hr=" "1.1"
D60V2, continuous
D60V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 32(XP11.3) CNV          7   30
  DEL PEAK 32(XP11.3) WILD-TYPE   26   68
        clus
vv       DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE
  FEMALE                       7                            26
  MALE                        30                            68
D60V4, continuous
D60V5, continuous
D60V6, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 32(XP11.3) CNV        9  0 13
  DEL PEAK 32(XP11.3) WILD-TYPE 25  2 31
D60V7, multiclass
    clus
vv   DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE
  M0                       9                            25
  M1                       0                             2
  MX                      13                            31
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 32(XP11.3) CNV       12  2  2  1  5
  DEL PEAK 32(XP11.3) WILD-TYPE 33  7 12  2  3
D60V8, multiclass
D60V9, continuous
D60V10, continuous
                               vv
clus                            STAGE II STAGE III STAGE IV
  DEL PEAK 32(XP11.3) CNV             12         5        6
  DEL PEAK 32(XP11.3) WILD-TYPE       14        22       20
D60V11, multiclass
           clus
vv          DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE
  STAGE II                       12                            14
  STAGE III                       5                            22
  STAGE IV                        6                            20

Clustering(61) Variable = Del Peak 33(Xq21.33)
D61V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 33(XQ21.33) CNV       24  5
  DEL PEAK 33(XQ21.33) WILD-TYPE 68 27
      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                            29                             95 
      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                             5                             27 
$`DEL PEAK 33(XQ21.33) CNV`
TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A3PH TCGA-CF-A1HS TCGA-CF-A27C 
       14.89         5.06         8.25         4.64         0.43         0.69 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A3IS TCGA-DK-A3IT 
        5.46         5.19         8.91       118.88        37.84         5.52 
TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3SN TCGA-FD-A3SS TCGA-FJ-A3Z7 TCGA-FT-A3EE 
       36.43         8.32         6.81         1.94        15.16         2.33 
TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GU-A42P TCGA-GV-A3JW TCGA-GV-A3JX 
       26.93         7.04         2.86         6.38         6.41         6.15 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WV 
        7.79         4.11         5.33         6.71         4.64 

$`DEL PEAK 33(XQ21.33) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
       19.00        26.10        12.16        17.85        19.46         5.06 
TCGA-BT-A20U TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 
        8.61         8.35         5.88         3.65         8.98         1.94 
TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3YL 
        2.01         0.46        12.92         4.90         7.20         8.09 
TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AD 
        2.53         2.14        31.40         8.98         7.04       100.47 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 
        7.17         5.85         6.64         1.81        10.59         7.76 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN 
      123.85        75.32         2.20         3.98         7.82         8.22 
TCGA-DK-A3IQ TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY 
       10.49        11.51         9.67         8.28        10.55       131.15 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        0.10         8.81         8.94         6.87         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM 
        8.94         7.96        32.02        24.30        10.98         6.12 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A43N TCGA-FD-A43U 
        5.49         4.54        46.78        19.79         7.89         6.84 
TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES 
        4.08        49.91        26.50         5.65        32.78        17.26 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC 
       20.12         0.82         2.24         1.32         4.50         1.38 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ 
        1.02         2.50         1.08         7.69         2.10         3.12 
TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A3QF 
        5.82         7.56         3.22         4.37         5.69         7.63 
TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        6.64         6.38         1.51         8.71         3.42 

      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                        118.88                         131.15 
      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                          6.38                           7.33 
[1] "0.4 - 118.9 (6.4)" "0.1 - 131.2 (7.3)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 33(XQ21.33) CNV"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 33(XQ21.33) CNV"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "DEL PEAK 33(XQ21.33) CNV"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 33(XQ21.33) CNV"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 33(XQ21.33) CNV"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "DEL PEAK 33(XQ21.33) CNV"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 33(XQ21.33) CNV"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZF 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FT-A3EE                     TCGA-G2-A2EF 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A2EJ                     TCGA-G2-A2EK 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A2EL                     TCGA-G2-A2EO 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A2ES                     TCGA-G2-A3IB 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-G2-A3IE                     TCGA-G2-A3VY 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3BM                     TCGA-GC-A3I6 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3OO                     TCGA-GC-A3RB 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3RC                     TCGA-GC-A3RD 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3WC                     TCGA-GC-A3YS 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GD-A2C5                     TCGA-GD-A3OP 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GD-A3OQ                     TCGA-GD-A3OS 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GU-A42P                     TCGA-GU-A42Q 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GU-A42R                     TCGA-GV-A3JV 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A3JW                     TCGA-GV-A3JX 
      "DEL PEAK 33(XQ21.33) CNV"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GV-A3JZ                     TCGA-GV-A3QF 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A3QH                     TCGA-GV-A3QI 
      "DEL PEAK 33(XQ21.33) CNV"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GV-A3QK                     TCGA-GV-A40E 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A40G                     TCGA-H4-A2HO 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-H4-A2HQ                     TCGA-K4-A3WS 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-K4-A3WU                     TCGA-K4-A3WV 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
[1] "hr=" "1.4"
D61V2, continuous
D61V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 33(XQ21.33) CNV          8   23
  DEL PEAK 33(XQ21.33) WILD-TYPE   25   75
        clus
vv       DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE
  FEMALE                        8                             25
  MALE                         23                             75
D61V4, continuous
D61V5, continuous
D61V6, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 33(XQ21.33) CNV        7  0 15
  DEL PEAK 33(XQ21.33) WILD-TYPE 27  2 29
D61V7, multiclass
    clus
vv   DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE
  M0                        7                             27
  M1                        0                              2
  MX                       15                             29
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 33(XQ21.33) CNV       11  3  3  1  4
  DEL PEAK 33(XQ21.33) WILD-TYPE 34  6 11  2  4
D61V8, multiclass
D61V9, continuous
D61V10, continuous
                                vv
clus                             STAGE II STAGE III STAGE IV
  DEL PEAK 33(XQ21.33) CNV              8         6        7
  DEL PEAK 33(XQ21.33) WILD-TYPE       18        21       19
D61V11, multiclass
           clus
vv          DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE
  STAGE II                         8                             18
  STAGE III                        6                             21
  STAGE IV                         7                             19

Clustering(62) Variable = Del Peak 34(Xq23)
D62V1, survival
                             sevent
clus2                          0  1
  DEL PEAK 34(XQ23) CNV       22  6
  DEL PEAK 34(XQ23) WILD-TYPE 70 26
      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                         28                          96 
      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                          6                          26 
$`DEL PEAK 34(XQ23) CNV`
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20T TCGA-BT-A3PH TCGA-CF-A1HS TCGA-CF-A27C 
       19.00        26.10        14.89         4.64         0.43         0.69 
TCGA-CU-A3QU TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IV 
        5.19         8.91       118.88        37.84         5.52         9.67 
TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3SN TCGA-FD-A3SS TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
       36.43         8.32         6.81         1.94        15.16         4.08 
TCGA-FT-A3EE TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GU-A42P TCGA-GV-A3JX 
        2.33        26.93         7.04         2.86         6.38         6.15 
TCGA-GV-A3QI TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WV 
        4.11         5.33         6.71         4.64 

$`DEL PEAK 34(XQ23) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20V 
       12.16        17.85        19.46         5.06         8.61         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 
        8.35         8.25         5.88         3.65         8.98         1.94 
TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ 
        2.01         0.46        12.92         4.90         7.20         5.46 
TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA 
        8.09         2.53         2.14        31.40         8.98         7.04 
TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 
      100.47         7.17         5.85         6.64         1.81        10.59 
TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM 
        7.76       123.85        75.32         2.20         3.98         7.82 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY 
        8.22        10.49        11.51         8.28        10.55       131.15 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        0.10         8.81         8.94         6.87         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM 
        8.94         7.96        32.02        24.30        10.98         6.12 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A43N TCGA-FD-A43U 
        5.49         4.54        46.78        19.79         7.89         6.84 
TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE 
       49.91        26.50         5.65        32.78        17.26        20.12 
TCGA-G2-A3VY TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD 
        0.82         2.24         1.32         4.50         1.38         1.02 
TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS 
        2.50         1.08         7.69         2.10         3.12         5.82 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QF 
        7.56         3.22         4.37         6.41         5.69         7.63 
TCGA-GV-A3QH TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        7.79         6.64         6.38         1.51         8.71         3.42 

      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                       0.43                        0.10 
      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                     118.88                      131.15 
      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                      6.545                       7.185 
[1] "0.4 - 118.9 (6.5)" "0.1 - 131.2 (7.2)"
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZF 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FT-A3EE                  TCGA-G2-A2EF 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A2EJ                  TCGA-G2-A2EK 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A2EL                  TCGA-G2-A2EO 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A2ES                  TCGA-G2-A3IB 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-G2-A3IE                  TCGA-G2-A3VY 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3BM                  TCGA-GC-A3I6 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3OO                  TCGA-GC-A3RB 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3RC                  TCGA-GC-A3RD 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3WC                  TCGA-GC-A3YS 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GD-A2C5                  TCGA-GD-A3OP 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GD-A3OQ                  TCGA-GD-A3OS 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GU-A42P                  TCGA-GU-A42Q 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GU-A42R                  TCGA-GV-A3JV 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3JW                  TCGA-GV-A3JX 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-GV-A3JZ                  TCGA-GV-A3QF 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3QH                  TCGA-GV-A3QI 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-GV-A3QK                  TCGA-GV-A40E 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A40G                  TCGA-H4-A2HO 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-H4-A2HQ                  TCGA-K4-A3WS 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-K4-A3WU                  TCGA-K4-A3WV 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
[1] "hr=" "1.4"
D62V2, continuous
D62V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 34(XQ23) CNV          7   23
  DEL PEAK 34(XQ23) WILD-TYPE   26   75
        clus
vv       DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE
  FEMALE                     7                          26
  MALE                      23                          75
D62V4, continuous
D62V5, continuous
D62V6, continuous
                             vv
clus                          M0 M1 MX
  DEL PEAK 34(XQ23) CNV        8  0 13
  DEL PEAK 34(XQ23) WILD-TYPE 26  2 31
D62V7, multiclass
    clus
vv   DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE
  M0                     8                          26
  M1                     0                           2
  MX                    13                          31
                             vv
clus                          N0 N1 N2 N3 NX
  DEL PEAK 34(XQ23) CNV       11  3  3  1  3
  DEL PEAK 34(XQ23) WILD-TYPE 34  6 11  2  5
D62V8, multiclass
D62V9, continuous
D62V10, continuous
                             vv
clus                          STAGE II STAGE III STAGE IV
  DEL PEAK 34(XQ23) CNV              7         6        7
  DEL PEAK 34(XQ23) WILD-TYPE       19        21       19
D62V11, multiclass
           clus
vv          DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE
  STAGE II                      7                          19
  STAGE III                     6                          21
  STAGE IV                      7                          19
                            V1.D                               V2 
                 "Time to Death"                            "AGE" 
                              V3                               V4 
                        "GENDER"    "KARNOFSKY.PERFORMANCE.SCORE" 
                              V5                               V6 
         "NUMBERPACKYEARSSMOKED" "TOBACCOSMOKINGHISTORYINDICATOR" 
                              V7                               V8 
            "DISTANT.METASTASIS"          "LYMPH.NODE.METASTASIS" 
                              V9                              V10 
         "NUMBER.OF.LYMPH.NODES"                "TUMOR.STAGECODE" 
                             V11 
         "NEOPLASM.DISEASESTAGE" 
> q(save="no")
