index	chromosome	region_start	region_end	peak_start	peak_end	enlarged_peak_start	enlarged_peak_end	n_genes_in_region	genes_in_region	n_genes_in_peak	genes_in_peak	n_genes_on_chip	genes_on_chip	top 3
1	1	149881398	149885583	149881398	149881398	120527361	151331787	131	hsa-mir-4257,hsa-mir-3118-3,hsa-mir-3118-2,hsa-mir-3118-1,ARNT,BCL9,CTSK,CTSS,ECM1,ENSA,FCGR1A,FCGR1B,FMO5,GJA5,GJA8,MCL1,NOTCH2,PDZK1,PI4KB,PRKAB2,PSMD4,RFX5,VPS72,HIST2H2AA3,HIST2H2AC,HIST2H2BE,HIST2H4A,PIP5K1A,ANXA9,ITGA10,PEX11B,PRPF3,SEC22B,CHD1L,PDE4DIP,SETDB1,SV2A,RBM8A,SF3B4,PIAS3,SEMA6C,POLR3C,TXNIP,MTMR11,MLLT11,CD160,VPS45,RPRD2,CA14,NBPF14,RNF115,TMOD4,CERS2,BOLA1,APH1A,PLEKHO1,ACP6,GPR89B,MRPS21,ADAMTSL4,C1orf56,GOLPH3L,FAM63A,CDC42SE1,OTUD7B,FAM91A2,ZNF687,PRUNE,SCNM1,TNFAIP8L2,C1orf54,TARS2,ANP32E,HORMAD1,POLR3GL,GNRHR2,GABPB2,HIST2H3C,LIX1L,C1orf51,HFE2,ANKRD35,BNIPL,PPIAL4A,PDIA3P,NBPF11,NUDT17,NBPF15,ANKRD34A,HIST2H2AB,HIST2H3A,HIST2H2BC,HIST2H2BA,LOC375010,NOTCH2NL,FLJ39739,LOC388692,LYSMD1,NBPF9,HIST2H2BF,HIST2H4B,PPIAL4G,PPIAL4D,LOC645166,EMBP1,SRGAP2P2,PPIAL4B,LOC653513,GPR89A,PPIAL4C,HIST2H3D,FAM72B,HIST2H2AA4,FAM72D,LOC728855,LOC728875,NBPF24,GPR89C,NBPF16,PDZK1P1,PPIAL4F,LOC728989,PPIAL4E,PFN1P2,LOC100130000,NBPF10,FCGR1C,LOC100286793,LOC100289211,MIR4257,TNFAIP8L2-SCNM1,	84	hsa-mir-3118-3,hsa-mir-3118-2,hsa-mir-3118-1,BCL9,FCGR1A,FCGR1B,FMO5,GJA5,GJA8,NOTCH2,PDZK1,PRKAB2,HIST2H2AA3,HIST2H2AC,HIST2H2BE,HIST2H4A,ITGA10,PEX11B,SEC22B,CHD1L,PDE4DIP,SV2A,RBM8A,PIAS3,POLR3C,TXNIP,CD160,NBPF14,RNF115,BOLA1,ACP6,GPR89B,FAM91A2,POLR3GL,GNRHR2,HIST2H3C,LIX1L,HFE2,ANKRD35,PPIAL4A,PDIA3P,NBPF11,NUDT17,NBPF15,ANKRD34A,HIST2H2AB,HIST2H3A,HIST2H2BC,HIST2H2BA,LOC375010,NOTCH2NL,FLJ39739,LOC388692,NBPF9,HIST2H2BF,HIST2H4B,PPIAL4G,PPIAL4D,LOC645166,EMBP1,SRGAP2P2,PPIAL4B,LOC653513,GPR89A,PPIAL4C,HIST2H3D,FAM72B,HIST2H2AA4,FAM72D,LOC728855,LOC728875,NBPF24,GPR89C,NBPF16,PDZK1P1,PPIAL4F,LOC728989,PPIAL4E,PFN1P2,LOC100130000,NBPF10,FCGR1C,LOC100286793,LOC100289211,	
2	2	172623906	182840852	178164554	178190496	178072321	178246961	6	hsa-mir-3128,NFE2L2,HNRNPA3,LOC100130691,MIR3128,MIR4444-1,	1	LOC100130691,	
3	2	96953482	98881243	97519493	97556543	97507481	97577317	4	ANKRD39,FAM178B,SEMA4C,ANKRD23,	3	ANKRD39,FAM178B,SEMA4C,	
4	3	131652142	197538677	182391376	182450900	178511920	182920387	24	ACTL6A,NDUFB5,PIK3CA,SOX2,FXR1,USP13,KCNMB2,MCF2L2,ATP11B,LAMP3,KCNMB3,ZNF639,PEX5L,DCUN1D1,MFN1,MCCC1,MRPL47,GNB4,ZMAT3,DNAJC19,TTC14,CCDC39,SOX2-OT,FLJ46066,	0	[ATP11B]	
5	5	914233	5369933	1395077	1409047	914233	1411845	26	SDHA,SLC6A3,SLC9A3,TERT,TRIP13,PDCD6,SLC12A7,TPPP,EXOC3,PP7080,CEP72,AHRR,BRD9,ZDHHC11,CLPTM1L,NKD2,C5orf55,CCDC127,PLEKHG4B,SLC6A19,SLC6A18,LRRC14B,LOC100506688,MIR4457,MIR4456,MIR4635,	1	SLC6A3,	
6	5	41417234	44248526	42815794	42818726	39933576	50124856	35	hsa-mir-1274a,C6,C7,FGF10,GHR,HMGCS1,OXCT1,PRKAA1,PTGER4,RPL37,SEPP1,ZNF131,PAIP1,MRPS30,NNT,TTC33,FBXO4,CCL28,C5orf28,PARP8,CARD6,EMB,HEATR7B2,LOC153684,NIM1,C5orf51,PLCXD3,HCN1,C5orf34,C5orf39,SNORD72,LOC648987,CCDC152,LOC100132356,LOC100506548,	0	[SEPP1]	
7	6	53078758	56797574	54214224	54249571	53076459	55850998	12	BMP5,GCLC,HCRTR2,TINAG,HMGCLL1,LRRC1,ELOVL5,MLIP,FAM83B,GFRAL,KLHL31,RPS16P5,	1	TINAG,	
8	6	64149609	64623590	64327031	64386060	64264872	64567240	3	PTP4A1,PHF3,EYS,	1	PHF3,	
9	7	52840989	57923947	55138231	55221655	55040877	55428979	1	EGFR,	1	EGFR,	
10	7	83474010	110360432	99609037	99609037	98405098	100126491	62	hsa-mir-106b,AZGP1,CYP3A7,CYP3A4,CYP3A5,MCM7,PMS2P1,TAF6,ZNF3,ZKSCAN1,ZSCAN21,TRRAP,BUD31,AP4M1,ATP5J2,ARPC1B,ARPC1A,STAG3,CPSF4,COPS6,PDAP1,ZKSCAN5,PTCD1,PILRB,PILRA,ZCWPW1,C7orf43,MEPCE,SMURF1,CYP3A43,ZNF655,PVRIG,GAL3ST4,OR2AE1,TSC22D4,ZNF394,MYH16,TRIM4,ZNF498,FAM200A,PPP1R35,GPC2,TMEM130,NYAP1,CNPY4,MBLAC1,ZNF789,GJC3,GATS,C7orf59,KPNA7,C7orf61,MIR106B,MIR25,MIR93,SPDYE3,AZGP1P1,LOC100289187,MIR3609,ATP5J2-PTCD1,MIR4658,CYP3A7-CYP3AP1,	1	ZKSCAN1,	
11	8	35517856	41438746	38155394	38247106	38150727	38267506	3	FGFR1,WHSC1L1,LETM2,	2	WHSC1L1,LETM2,	
12	8	100221173	145232496	128345731	128376801	128157107	128439955	1	POU5F1B,	0	[POU5F1B]	
13	8	47460945	50394054	49270895	49278506	49118437	50222487	3	SNAI2,EFCAB1,C8orf22,	0	[UBE2V2]	
14	9	32874871	37324680	35651597	35725068	35440394	36015083	27	CA9,CD72,NPR2,RMRP,TESK1,TLN1,TPM2,RGP1,RUSC2,CREB3,SPAG8,SIT1,TMEM8B,OR2S2,GBA2,HINT2,C9orf100,FP588,LOC158376,ATP8B5P,CCDC107,C9orf128,OR13J1,HRCT1,MSMP,FAM166B,MIR4667,	9	CA9,RMRP,TLN1,TPM2,CREB3,SIT1,GBA2,C9orf100,CCDC107,	
15	9	789932	19167849	13898956	13986757	13398230	14319509	3	NFIB,FLJ41200,C9orf146,	1	C9orf146,	
16	11	61650747	86188711	70089007	70111511	70076587	70235868	3	hsa-mir-548k,PPFIA1,MIR548K,	0	[PPFIA1]	
17	11	34248868	36792869	35867707	35879571	35818219	36224958	3	TRIM44,LDLRAD3,MIR3973,	0	[TRIM44]	
18	12	64374139	72162044	69575602	69619982	69215935	70377905	14	hsa-mir-1279,CPM,LYZ,MDM2,YEATS4,CCT2,FRS2,CPSF6,RAB3IP,BEST3,LRRC10,MIR1279,MIR3913-2,MIR3913-1,	0	[CPSF6]	
19	12	889902	5467303	922392	1057093	889902	6056794	52	CACNA1C,CCND2,FGF6,FKBP4,FOXM1,KCNA1,KCNA5,KCNA6,NDUFA9,NINJ2,NTF3,RAD52,KDM5A,SLC6A12,SLC6A13,TEAD4,TULP3,FGF23,DYRK4,AKAP3,RAD51AP1,TSPAN9,ERC1,GALNT8,ITFG2,PRMT8,PARP11,ANO2,C12orf4,C12orf5,WNK1,ADIPOR2,WNT5B,C12orf32,NRIP2,CCDC77,EFCAB4B,CACNA2D4,FBXL14,DCP1B,B4GALNT3,LOC283440,IQSEC3,LOC574538,LRTM2,FAM138D,LOC100271702,LOC100288778,LOC100292680,MIR3649,LOC100507424,LOC100652846,	2	RAD52,WNK1,	
20	13	72208060	75476711	73921164	73973132	73866061	74042621	0	[KLF5]	0	[KLF5]	
21	15	99816804	101082063	100987932	100987932	95915788	101884307	40	hsa-mir-1302-10,hsa-mir-1469,ALDH1A3,IGF1R,MEF2A,PCSK6,SNRPA1,NR2F2,CHSY1,SYNM,OR4F4,LINS,SELS,TTC23,LRRK1,TM2D3,ARRDC4,LOC91948,TARSL2,LRRC28,ASB7,LYSMD4,PGPEP1L,LOC145820,SPATA8,ADAMTS17,DNM1P46,CERS3,FAM169B,WASH3P,FLJ42289,OR4F6,OR4F15,FAM138E,GPCRLTM7,DDX11L1,DDX11L9,MIR1469,LOC100507472,MIR4714,	1	CERS3,	
22	17	37634890	38169612	37853497	37870539	37848545	37875909	1	ERBB2,	1	ERBB2,	
23	18	19555857	24933672	20851746	20858139	20243730	20966186	4	RBBP8,TMEM241,CABLES1,MIR4741,	0	[CABLES1]	
24	18	329586	4951802	3377842	3405523	2830440	4142553	10	TGIF1,MYOM1,DLGAP1,LPIN2,MYL12A,EMILIN2,MYL12B,LOC201477,FLJ35776,LOC727896,	0	[TGIF1]	
25	20	29843973	33761563	32477972	32496506	32056003	32914699	13	AHCY,ASIP,E2F1,EIF2S2,CBFA2T2,PXMP4,RALY,NECAB3,ZNF341,C20orf144,CHMP4B,ACTL10,MIR4755,	0	[CHMP4B]	
