Clinical Features	MRNA_CNMF		MRNA_CHIERARCHICAL		CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL	
	nMutated (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
VHL	138 (47%)	155	0.030683	1	0.051378	1	0.58179	1	0.3972	1	0.88534	1	0.30693	1	0.0074407	1	0.065378	1	0.31058	1	0.15612	1
SV2C	3 (1%)	290	NA	NA	NA	NA	0.16935	1	0.010237	1	0.54009	1	0.78988	1	NA	NA	NA	NA	0.23553	1	0.019106	1
PBRM1	107 (37%)	186	0.02106	1	0.073527	1	0.00020099	0.0448	0.00064546	0.143	0.0073849	1	0.79905	1	0.00064883	0.143	0.082154	1	0.045584	1	0.00014135	0.0318
BAP1	27 (9%)	266	0.021229	1	0.011104	1	0.088296	1	0.0037601	0.82	0.025914	1	0.77442	1	0.0014463	0.317	3.7596e-08	8.61e-06	0.00019196	0.043	9.9175e-07	0.000226
SETD2	34 (12%)	259	0.74671	1	1	1	0.099162	1	7.9986e-05	0.0182	0.24918	1	0.20958	1	0.33838	1	0.65465	1	0.097824	1	0.46474	1
KDM5C	18 (6%)	275	NA	NA	NA	NA	0.351	1	0.2608	1	0.70981	1	0.038794	1	0.10545	1	0.67143	1	0.051567	1	0.68399	1
MTOR	24 (8%)	269	NA	NA	NA	NA	0.63102	1	0.04303	1	8.3206e-05	0.0188	0.00058152	0.129	0.70669	1	0.32308	1	0.35835	1	0.54416	1
TP53	6 (2%)	287	NA	NA	NA	NA	0.8749	1	0.53494	1	0.50558	1	0.42673	1	0.48126	1	0.24492	1	0.86753	1	0.078715	1
PTEN	9 (3%)	284	0.16278	1	0.66484	1	1	1	0.31708	1	0.086928	1	0.6061	1	0.0083516	1	0.043716	1	0.41236	1	0.66099	1
EBPL	6 (2%)	287	NA	NA	NA	NA	0.76935	1	0.79716	1	0.47658	1	0.41397	1	0.31771	1	0.17419	1	0.20047	1	0.3133	1
PIK3CA	10 (3%)	283	NA	NA	NA	NA	0.31916	1	0.20486	1	0.44545	1	1	1	0.91382	1	0.5863	1	0.84016	1	0.40418	1
TSPAN19	4 (1%)	289	NA	NA	NA	NA	0.4732	1	NA	NA	0.060035	1	0.2476	1	0.39114	1	0.45405	1	0.27419	1	0.058272	1
NBPF10	19 (6%)	274	0.53747	1	0.60169	1	0.59354	1	0.8722	1	0.089715	1	0.45027	1	0.3497	1	0.048355	1	0.647	1	0.92082	1
TOR1A	3 (1%)	290	NA	NA	NA	NA	0.4636	1	NA	NA	0.82813	1	0.22532	1	0.56286	1	1	1	0.80039	1	1	1
MUC4	41 (14%)	252	0.78633	1	0.89239	1	0.08386	1	0.044024	1	0.046736	1	0.54261	1	0.047558	1	0.11374	1	0.088879	1	0.062216	1
UQCRFS1	3 (1%)	290	NA	NA	NA	NA	0.25254	1	NA	NA	NA	NA	NA	NA	0.2926	1	0.34078	1	0.32217	1	0.61672	1
WDR52	9 (3%)	284	NA	NA	NA	NA	0.28349	1	0.48198	1	0.57562	1	1	1	0.44773	1	0.50576	1	0.6231	1	0.23257	1
BAGE2	4 (1%)	289	NA	NA	NA	NA	0.81641	1	0.11737	1	0.63506	1	0.074854	1	0.17113	1	0.091448	1	0.047343	1	0.0064419	1
CNTNAP4	9 (3%)	284	NA	NA	NA	NA	0.75759	1	0.3689	1	0.093199	1	0.51338	1	0.81537	1	0.62544	1	0.9076	1	1	1
CR1	10 (3%)	283	NA	NA	NA	NA	1	1	0.27914	1	0.17753	1	0.49705	1	0.097767	1	0.4829	1	0.60212	1	0.57429	1
STAG2	9 (3%)	284	NA	NA	NA	NA	0.078942	1	0.011913	1	0.46818	1	0.41219	1	0.35495	1	0.13025	1	0.078478	1	0.067603	1
MSN	4 (1%)	289	NA	NA	NA	NA	0.58051	1	0.44449	1	0.79358	1	0.53286	1	0.28437	1	0.16996	1	0.35202	1	0.66468	1
ABCB1	8 (3%)	285	NA	NA	NA	NA	0.33324	1	0.6084	1	0.073342	1	0.079275	1	0.26512	1	0.16057	1	0.26844	1	0.089164	1
ADCY8	5 (2%)	288	NA	NA	NA	NA	0.52705	1	0.10633	1	0.9526	1	1	1	0.84801	1	1	1	0.62104	1	0.35805	1
NPNT	6 (2%)	287	NA	NA	NA	NA	0.667	1	0.50201	1	0.18036	1	1	1	0.33263	1	0.38171	1	0.5815	1	0.75556	1
OR5H1	3 (1%)	290	NA	NA	NA	NA	1	1	NA	NA	0.25751	1	0.047576	1	0.76824	1	0.72052	1	0.60235	1	0.10126	1
SPAM1	5 (2%)	288	NA	NA	NA	NA	0.38571	1	NA	NA	0.44007	1	0.27682	1	0.11642	1	0.11009	1	0.19598	1	0.47754	1
TPTE2	7 (2%)	286	NA	NA	NA	NA	0.54932	1	0.62965	1	0.60925	1	0.69363	1	0.87597	1	0.87338	1	0.15748	1	0.60762	1