name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-A3-3308-01A-01D-0966-08	194	91	103	67	5.309278e-01	2	all capture (no interval list)	65505363	24	65	3.663822e-07	9.922852e-07
TCGA-A3-3311-01A-01D-0966-08	133	66	67	52	5.037594e-01	2	all capture (no interval list)	65505363	14	51	2.137230e-07	7.785622e-07
TCGA-A3-3316-01A-01D-0966-08	107	53	54	48	5.046729e-01	2	all capture (no interval list)	65505363	5	47	7.632963e-08	7.174985e-07
TCGA-A3-3317-01A-01D-0966-08	156	103	53	73	3.397436e-01	2	all capture (no interval list)	65505363	29	69	4.427118e-07	1.053349e-06
TCGA-A3-3319-01A-01D-0966-08	228	92	136	71	5.964912e-01	2	all capture (no interval list)	65505363	21	71	3.205844e-07	1.083881e-06
TCGA-A3-3320-01A-01D-0966-08	179	101	78	75	4.357542e-01	2	all capture (no interval list)	65505363	26	74	3.969141e-07	1.129678e-06
TCGA-A3-3322-01A-01D-0966-08	142	64	78	47	5.492958e-01	2	all capture (no interval list)	65505363	17	47	2.595207e-07	7.174985e-07
TCGA-A3-3323-01A-01D-0966-08	108	60	48	44	4.444444e-01	2	all capture (no interval list)	65505363	16	44	2.442548e-07	6.717007e-07
TCGA-A3-3324-01A-01D-0966-08	147	42	105	29	7.142857e-01	2	all capture (no interval list)	65505363	12	24	1.831911e-07	3.663822e-07
TCGA-A3-3326-01A-01D-0966-08	141	60	81	42	5.744681e-01	2	all capture (no interval list)	65505363	18	40	2.747867e-07	6.106370e-07
TCGA-A3-3346-01A-01D-0966-08	143	102	41	76	2.867133e-01	1	exome+100bp flanks	34834024	26	73	7.463967e-07	2.095652e-06
TCGA-A3-3347-01A-02D-1386-10	284	65	219	43	7.711268e-01	2	all capture (no interval list)	65505363	22	43	3.358504e-07	6.564348e-07
TCGA-A3-3349-01A-01D-1251-10	295	60	235	46	7.966102e-01	2	all capture (no interval list)	65505363	13	42	1.984570e-07	6.411689e-07
TCGA-A3-3351-01A-02D-1386-10	518	57	461	39	8.899614e-01	2	all capture (no interval list)	65505363	15	28	2.289889e-07	4.274459e-07
TCGA-A3-3357-01A-02D-1421-08	179	110	69	82	3.854749e-01	2	all capture (no interval list)	65505363	28	78	4.274459e-07	1.190742e-06
TCGA-A3-3358-01A-01D-1534-10	861	114	747	83	8.675958e-01	2	all capture (no interval list)	65505363	30	82	4.579778e-07	1.251806e-06
TCGA-A3-3362-01A-02D-1386-10	369	90	279	72	7.560976e-01	2	all capture (no interval list)	65505363	17	71	2.595207e-07	1.083881e-06
TCGA-A3-3363-01A-01D-0966-08	149	62	87	51	5.838926e-01	2	all capture (no interval list)	65505363	11	50	1.679252e-07	7.632963e-07
TCGA-A3-3365-01A-01D-0966-08	133	66	67	56	5.037594e-01	2	all capture (no interval list)	65505363	10	55	1.526593e-07	8.396259e-07
TCGA-A3-3367-01A-02D-1421-08	207	105	102	77	4.927536e-01	2	all capture (no interval list)	65505363	28	75	4.274459e-07	1.144944e-06
TCGA-A3-3370-01A-02D-1421-08	136	43	93	35	6.838235e-01	2	all capture (no interval list)	65505363	8	35	1.221274e-07	5.343074e-07
TCGA-A3-3372-01A-01D-0966-08	139	73	66	55	4.748201e-01	2	all capture (no interval list)	65505363	18	53	2.747867e-07	8.090941e-07
TCGA-A3-3373-01A-02D-1421-08	122	58	64	45	5.245902e-01	2	all capture (no interval list)	65505363	12	44	1.831911e-07	6.717007e-07
TCGA-A3-3376-01A-02D-1421-08	151	64	87	50	5.761589e-01	2	all capture (no interval list)	65505363	14	50	2.137230e-07	7.632963e-07
TCGA-A3-3378-01A-01D-0966-08	159	78	81	53	5.094340e-01	2	all capture (no interval list)	65505363	25	52	3.816481e-07	7.938281e-07
TCGA-A3-3380-01A-01D-0966-08	113	39	74	32	6.548673e-01	2	all capture (no interval list)	65505363	7	31	1.068615e-07	4.732437e-07
TCGA-A3-3382-01A-01D-0966-08	173	100	73	81	4.219653e-01	2	all capture (no interval list)	65505363	18	79	2.747867e-07	1.206008e-06
TCGA-A3-3383-01A-01D-0966-08	124	65	59	47	4.758065e-01	2	all capture (no interval list)	65505363	17	45	2.595207e-07	6.869667e-07
TCGA-A3-3385-01A-02D-1421-08	150	73	77	57	5.133333e-01	2	all capture (no interval list)	65505363	16	56	2.442548e-07	8.548918e-07
TCGA-A3-3387-01A-01D-1534-10	489	125	364	94	7.443763e-01	2	all capture (no interval list)	65505363	29	92	4.427118e-07	1.404465e-06
TCGA-AK-3429-01A-02D-1386-10	222	80	142	60	6.396396e-01	2	all capture (no interval list)	65505363	18	58	2.747867e-07	8.854237e-07
TCGA-AK-3430-01A-01D-1251-10	320	99	221	78	6.906250e-01	2	all capture (no interval list)	65505363	21	77	3.205844e-07	1.175476e-06
TCGA-AK-3436-01A-02D-1386-10	268	82	186	61	6.940299e-01	2	all capture (no interval list)	65505363	19	61	2.900526e-07	9.312215e-07
TCGA-AK-3444-01A-01D-0966-08	191	113	78	87	4.083770e-01	2	all capture (no interval list)	65505363	26	86	3.969141e-07	1.312870e-06
TCGA-AK-3451-01A-02D-1251-10	500	135	365	108	7.300000e-01	2	all capture (no interval list)	65505363	27	106	4.121800e-07	1.618188e-06
TCGA-AK-3455-01A-01D-0966-08	114	63	51	51	4.473684e-01	2	all capture (no interval list)	65505363	11	50	1.679252e-07	7.632963e-07
TCGA-AK-3456-01A-02D-1386-10	202	65	137	45	6.782178e-01	2	all capture (no interval list)	65505363	19	42	2.900526e-07	6.411689e-07
TCGA-AK-3458-01A-01D-1501-10	245	50	195	37	7.959184e-01	2	all capture (no interval list)	65505363	12	36	1.831911e-07	5.495733e-07
TCGA-AS-3778-01A-01D-0966-08	323	203	120	147	3.715170e-01	2	all capture (no interval list)	65505363	54	146	8.243600e-07	2.228825e-06
TCGA-B0-4700-01A-02D-1534-10	785	98	687	72	8.751592e-01	2	all capture (no interval list)	65505363	24	67	3.663822e-07	1.022817e-06
TCGA-B0-4706-01A-01D-1501-10	434	110	324	78	7.465438e-01	2	all capture (no interval list)	65505363	26	76	3.969141e-07	1.160210e-06
TCGA-B0-4710-01A-01D-1501-10	547	137	410	107	7.495430e-01	2	all capture (no interval list)	65505363	30	105	4.579778e-07	1.602922e-06
TCGA-B0-4712-01A-01D-1501-10	408	224	184	178	4.509804e-01	2	all capture (no interval list)	65505363	44	171	6.717007e-07	2.610473e-06
TCGA-B0-4810-01A-01D-1501-10	544	135	409	108	7.518382e-01	2	all capture (no interval list)	65505363	25	102	3.816481e-07	1.557124e-06
TCGA-B0-4811-01A-01D-1501-10	408	133	275	93	6.740196e-01	2	all capture (no interval list)	65505363	38	90	5.801052e-07	1.373933e-06
TCGA-B0-4815-01A-01D-1501-10	477	129	348	86	7.295597e-01	2	all capture (no interval list)	65505363	41	84	6.259030e-07	1.282338e-06
TCGA-B0-4816-01A-01D-1501-10	345	85	260	68	7.536232e-01	2	all capture (no interval list)	65505363	16	68	2.442548e-07	1.038083e-06
TCGA-B0-4818-01A-01D-1501-10	336	91	245	67	7.291667e-01	2	all capture (no interval list)	65505363	22	62	3.358504e-07	9.464874e-07
TCGA-B0-4823-01A-02D-1421-08	224	127	97	92	4.330357e-01	2	all capture (no interval list)	65505363	35	91	5.343074e-07	1.389199e-06
TCGA-B0-4827-01A-02D-1421-08	164	111	53	84	3.231707e-01	2	all capture (no interval list)	65505363	27	83	4.121800e-07	1.267072e-06
TCGA-B0-4842-01A-02D-1421-08	101	56	45	47	4.455446e-01	2	all capture (no interval list)	65505363	9	47	1.373933e-07	7.174985e-07
TCGA-B0-4852-01A-01D-1501-10	586	94	492	73	8.395904e-01	2	all capture (no interval list)	65505363	19	72	2.900526e-07	1.099147e-06
TCGA-B0-4945-01A-01D-1421-08	127	75	52	58	4.094488e-01	2	all capture (no interval list)	65505363	16	57	2.442548e-07	8.701578e-07
TCGA-B0-5075-01A-01D-1462-08	174	98	76	76	4.367816e-01	2	all capture (no interval list)	65505363	22	76	3.358504e-07	1.160210e-06
TCGA-B0-5077-01A-01D-1462-08	121	62	59	47	4.876033e-01	2	all capture (no interval list)	65505363	15	47	2.289889e-07	7.174985e-07
TCGA-B0-5080-01A-01D-1501-10	314	76	238	59	7.579618e-01	2	all capture (no interval list)	65505363	17	58	2.595207e-07	8.854237e-07
TCGA-B0-5081-01A-01D-1462-08	114	56	58	43	5.087719e-01	2	all capture (no interval list)	65505363	13	42	1.984570e-07	6.411689e-07
TCGA-B0-5085-01A-01D-1462-08	151	78	73	62	4.834437e-01	2	all capture (no interval list)	65505363	16	61	2.442548e-07	9.312215e-07
TCGA-B0-5088-01A-01D-1462-08	145	76	69	55	4.758621e-01	2	all capture (no interval list)	65505363	21	55	3.205844e-07	8.396259e-07
TCGA-B0-5092-01A-01D-1421-08	187	122	65	95	3.475936e-01	2	all capture (no interval list)	65505363	27	94	4.121800e-07	1.434997e-06
TCGA-B0-5094-01A-01D-1421-08	168	107	61	87	3.630952e-01	2	all capture (no interval list)	65505363	18	87	2.747867e-07	1.328136e-06
TCGA-B0-5095-01A-01D-1421-08	157	89	68	70	4.331210e-01	2	all capture (no interval list)	65505363	19	69	2.900526e-07	1.053349e-06
TCGA-B0-5096-01A-01D-1421-08	169	130	39	91	2.307692e-01	1	exome+100bp flanks	34834024	37	89	1.062180e-06	2.554973e-06
TCGA-B0-5097-01A-01D-1421-08	110	69	41	55	3.727273e-01	2	all capture (no interval list)	65505363	13	54	1.984570e-07	8.243600e-07
TCGA-B0-5099-01A-01D-1421-08	209	102	107	86	5.119617e-01	2	all capture (no interval list)	65505363	16	84	2.442548e-07	1.282338e-06
TCGA-B0-5100-01A-01D-1421-08	112	46	66	33	5.892857e-01	2	all capture (no interval list)	65505363	13	33	1.984570e-07	5.037755e-07
TCGA-B0-5102-01A-01D-1421-08	130	54	76	44	5.846154e-01	2	all capture (no interval list)	65505363	10	44	1.526593e-07	6.717007e-07
TCGA-B0-5104-01A-01D-1421-08	119	64	55	46	4.621849e-01	2	all capture (no interval list)	65505363	18	46	2.747867e-07	7.022326e-07
TCGA-B0-5106-01A-01D-1421-08	152	84	68	63	4.473684e-01	2	all capture (no interval list)	65505363	20	62	3.053185e-07	9.464874e-07
TCGA-B0-5107-01A-01D-1421-08	122	59	63	46	5.163934e-01	2	all capture (no interval list)	65505363	13	46	1.984570e-07	7.022326e-07
TCGA-B0-5108-01A-01D-1421-08	86	55	31	43	3.604651e-01	2	all capture (no interval list)	65505363	12	43	1.831911e-07	6.564348e-07
TCGA-B0-5109-01A-02D-1421-08	116	61	55	49	4.741379e-01	2	all capture (no interval list)	65505363	12	46	1.831911e-07	7.022326e-07
TCGA-B0-5110-01A-01D-1421-08	149	71	78	51	5.234899e-01	2	all capture (no interval list)	65505363	19	50	2.900526e-07	7.632963e-07
TCGA-B0-5113-01A-01D-1421-08	83	37	46	27	5.542169e-01	2	all capture (no interval list)	65505363	10	26	1.526593e-07	3.969141e-07
TCGA-B0-5115-01A-01D-1421-08	129	56	73	49	5.658915e-01	2	all capture (no interval list)	65505363	7	49	1.068615e-07	7.480304e-07
TCGA-B0-5116-01A-02D-1421-08	121	75	46	55	3.801653e-01	2	all capture (no interval list)	65505363	20	55	3.053185e-07	8.396259e-07
TCGA-B0-5119-01A-02D-1421-08	184	104	80	84	4.347826e-01	2	all capture (no interval list)	65505363	19	81	2.900526e-07	1.236540e-06
TCGA-B0-5120-01A-01D-1421-08	119	83	36	54	3.025210e-01	2	all capture (no interval list)	65505363	28	54	4.274459e-07	8.243600e-07
TCGA-B0-5121-01A-02D-1421-08	104	64	40	48	3.846154e-01	2	all capture (no interval list)	65505363	16	47	2.442548e-07	7.174985e-07
TCGA-B0-5399-01A-01D-1501-10	636	77	559	56	8.789308e-01	2	all capture (no interval list)	65505363	20	54	3.053185e-07	8.243600e-07
TCGA-B0-5400-01A-01D-1501-10	666	85	581	55	8.723724e-01	2	all capture (no interval list)	65505363	28	52	4.274459e-07	7.938281e-07
TCGA-B0-5402-01A-01D-1501-10	629	94	535	74	8.505564e-01	2	all capture (no interval list)	65505363	20	70	3.053185e-07	1.068615e-06
TCGA-B0-5691-01A-11D-1534-10	667	92	575	70	8.620690e-01	2	all capture (no interval list)	65505363	20	69	3.053185e-07	1.053349e-06
TCGA-B0-5692-01A-11D-1534-10	989	99	890	67	8.998989e-01	2	all capture (no interval list)	65505363	32	63	4.885096e-07	9.617533e-07
TCGA-B0-5693-01A-11D-1534-10	460	73	387	58	8.413043e-01	2	all capture (no interval list)	65505363	14	55	2.137230e-07	8.396259e-07
TCGA-B0-5694-01A-11D-1534-10	645	95	550	70	8.527132e-01	2	all capture (no interval list)	65505363	24	67	3.663822e-07	1.022817e-06
TCGA-B0-5695-01A-11D-1534-10	503	108	395	87	7.852883e-01	2	all capture (no interval list)	65505363	20	81	3.053185e-07	1.236540e-06
TCGA-B0-5696-01A-11D-1534-10	1900	93	1807	74	9.510526e-01	3	all genome (WGS)	34834024	18	70	5.167362e-07	2.009530e-06
TCGA-B0-5697-01A-11D-1534-10	499	92	407	63	8.156313e-01	2	all capture (no interval list)	65505363	29	61	4.427118e-07	9.312215e-07
TCGA-B0-5698-01A-11D-1669-08	131	79	52	66	3.969466e-01	2	all capture (no interval list)	65505363	11	64	1.679252e-07	9.770192e-07
TCGA-B0-5699-01A-11D-1534-10	302	66	236	48	7.814570e-01	2	all capture (no interval list)	65505363	18	45	2.747867e-07	6.869667e-07
TCGA-B0-5701-01A-11D-1534-10	506	134	372	105	7.351779e-01	2	all capture (no interval list)	65505363	29	102	4.427118e-07	1.557124e-06
TCGA-B0-5702-01A-11D-1534-10	474	119	355	87	7.489451e-01	2	all capture (no interval list)	65505363	31	87	4.732437e-07	1.328136e-06
TCGA-B0-5703-01A-11D-1534-10	662	117	545	85	8.232628e-01	2	all capture (no interval list)	65505363	28	76	4.274459e-07	1.160210e-06
TCGA-B0-5705-01A-11D-1534-10	941	130	811	99	8.618491e-01	2	all capture (no interval list)	65505363	31	96	4.732437e-07	1.465529e-06
TCGA-B0-5706-01A-11D-1534-10	679	99	580	72	8.541973e-01	2	all capture (no interval list)	65505363	26	69	3.969141e-07	1.053349e-06
TCGA-B0-5707-01A-11D-1534-10	910	93	817	67	8.978022e-01	2	all capture (no interval list)	65505363	25	65	3.816481e-07	9.922852e-07
TCGA-B0-5709-01A-11D-1534-10	777	135	642	95	8.262548e-01	2	all capture (no interval list)	65505363	39	90	5.953711e-07	1.373933e-06
TCGA-B0-5710-01A-11D-1669-08	91	53	38	38	4.175824e-01	2	all capture (no interval list)	65505363	15	38	2.289889e-07	5.801052e-07
TCGA-B0-5711-01A-11D-1669-08	93	50	43	45	4.623656e-01	2	all capture (no interval list)	65505363	5	42	7.632963e-08	6.411689e-07
TCGA-B0-5713-01A-11D-1669-08	162	117	45	94	2.777778e-01	1	exome+100bp flanks	34834024	23	93	6.602740e-07	2.669804e-06
TCGA-B0-5812-01A-11D-1669-08	117	73	44	61	3.760684e-01	2	all capture (no interval list)	65505363	12	61	1.831911e-07	9.312215e-07
TCGA-B2-3924-01A-01D-1458-08	161	90	71	67	4.409938e-01	2	all capture (no interval list)	65505363	23	67	3.511163e-07	1.022817e-06
TCGA-B2-3924-01A-02D-1386-10	532	127	405	91	7.612782e-01	2	all capture (no interval list)	65505363	35	86	5.343074e-07	1.312870e-06
TCGA-B2-4098-01A-01D-1458-08	152	70	82	47	5.394737e-01	2	all capture (no interval list)	65505363	23	46	3.511163e-07	7.022326e-07
TCGA-B2-4098-01A-02D-1386-10	394	112	282	74	7.157360e-01	2	all capture (no interval list)	65505363	38	72	5.801052e-07	1.099147e-06
TCGA-B2-4099-01A-02D-1251-10	349	129	220	94	6.303725e-01	2	all capture (no interval list)	65505363	34	87	5.190415e-07	1.328136e-06
TCGA-B2-4099-01A-02D-1458-08	167	85	82	65	4.910180e-01	2	all capture (no interval list)	65505363	20	63	3.053185e-07	9.617533e-07
TCGA-B2-4101-01A-02D-1458-08	101	56	45	46	4.455446e-01	2	all capture (no interval list)	65505363	9	46	1.373933e-07	7.022326e-07
TCGA-B2-4102-01A-02D-1386-10	848	88	760	63	8.962264e-01	2	all capture (no interval list)	65505363	20	53	3.053185e-07	8.090941e-07
TCGA-B2-5633-01A-01D-1534-10	759	88	671	67	8.840580e-01	2	all capture (no interval list)	65505363	21	65	3.205844e-07	9.922852e-07
TCGA-B2-5635-01A-01D-1534-10	572	97	475	69	8.304196e-01	2	all capture (no interval list)	65505363	26	67	3.969141e-07	1.022817e-06
TCGA-B2-5641-01A-01D-1534-10	646	135	511	102	7.910217e-01	2	all capture (no interval list)	65505363	31	98	4.732437e-07	1.496061e-06
TCGA-B4-5377-01A-01D-1501-10	528	104	424	73	8.030303e-01	2	all capture (no interval list)	65505363	29	70	4.427118e-07	1.068615e-06
TCGA-B8-4143-01A-01D-1806-10	225	80	145	59	6.444444e-01	2	all capture (no interval list)	65505363	21	54	3.205844e-07	8.243600e-07
TCGA-B8-4146-01B-11D-1669-08	86	50	36	39	4.186047e-01	2	all capture (no interval list)	65505363	11	38	1.679252e-07	5.801052e-07
TCGA-B8-4148-01A-02D-1386-10	177	42	135	32	7.627119e-01	2	all capture (no interval list)	65505363	10	30	1.526593e-07	4.579778e-07
TCGA-B8-4151-01A-01D-1806-10	189	79	110	60	5.820106e-01	2	all capture (no interval list)	65505363	19	55	2.900526e-07	8.396259e-07
TCGA-B8-4153-01B-11D-1669-08	140	90	50	71	3.571429e-01	2	all capture (no interval list)	65505363	19	70	2.900526e-07	1.068615e-06
TCGA-B8-4154-01A-01D-1251-10	416	91	325	70	7.812500e-01	2	all capture (no interval list)	65505363	20	66	3.053185e-07	1.007551e-06
TCGA-B8-4620-01A-01D-1553-08	120	68	52	57	4.333333e-01	2	all capture (no interval list)	65505363	10	56	1.526593e-07	8.548918e-07
TCGA-B8-4620-01A-02D-1386-10	183	75	108	64	5.901639e-01	2	all capture (no interval list)	65505363	11	61	1.679252e-07	9.312215e-07
TCGA-B8-4621-01A-01D-1501-10	488	115	373	86	7.643443e-01	2	all capture (no interval list)	65505363	26	84	3.969141e-07	1.282338e-06
TCGA-B8-4622-01A-02D-1553-08	128	79	49	53	3.828125e-01	2	all capture (no interval list)	65505363	26	53	3.969141e-07	8.090941e-07
TCGA-B8-5158-01A-01D-1421-08	129	74	55	55	4.263566e-01	2	all capture (no interval list)	65505363	18	55	2.747867e-07	8.396259e-07
TCGA-B8-5159-01A-01D-1421-08	113	71	42	58	3.716814e-01	2	all capture (no interval list)	65505363	13	58	1.984570e-07	8.854237e-07
TCGA-B8-5163-01A-01D-1421-08	148	82	66	60	4.459459e-01	2	all capture (no interval list)	65505363	22	59	3.358504e-07	9.006896e-07
TCGA-B8-5164-01A-01D-1421-08	141	85	56	66	3.971631e-01	2	all capture (no interval list)	65505363	19	66	2.900526e-07	1.007551e-06
TCGA-B8-5165-01A-01D-1421-08	63	25	38	18	6.031746e-01	2	all capture (no interval list)	65505363	7	18	1.068615e-07	2.747867e-07
TCGA-B8-5545-01A-01D-1669-08	56	26	30	17	5.357143e-01	2	all capture (no interval list)	65505363	9	17	1.373933e-07	2.595207e-07
TCGA-B8-5546-01A-01D-1534-10	693	62	631	50	9.105339e-01	3	all genome (WGS)	34834024	12	50	3.444908e-07	1.435378e-06
TCGA-B8-5549-01A-01D-1534-10	289	100	189	71	6.539792e-01	2	all capture (no interval list)	65505363	29	65	4.427118e-07	9.922852e-07
TCGA-B8-5551-01A-01D-1534-10	792	114	678	83	8.560606e-01	2	all capture (no interval list)	65505363	30	77	4.579778e-07	1.175476e-06
TCGA-B8-5552-01B-11D-1669-08	67	36	31	31	4.626866e-01	2	all capture (no interval list)	65505363	5	30	7.632963e-08	4.579778e-07
TCGA-BP-4161-01A-02D-1386-10	352	119	233	95	6.619318e-01	2	all capture (no interval list)	65505363	23	92	3.511163e-07	1.404465e-06
TCGA-BP-4162-01A-02D-1386-10	357	82	275	60	7.703081e-01	2	all capture (no interval list)	65505363	18	56	2.747867e-07	8.548918e-07
TCGA-BP-4163-01A-02D-1386-10	217	80	137	60	6.313364e-01	2	all capture (no interval list)	65505363	19	55	2.900526e-07	8.396259e-07
TCGA-BP-4164-01A-02D-1386-10	684	155	529	113	7.733918e-01	2	all capture (no interval list)	65505363	40	107	6.106370e-07	1.633454e-06
TCGA-BP-4167-01A-02D-1386-10	654	171	483	122	7.385321e-01	2	all capture (no interval list)	65505363	47	118	7.174985e-07	1.801379e-06
TCGA-BP-4770-01A-01D-1501-10	461	171	290	122	6.290672e-01	2	all capture (no interval list)	65505363	45	116	6.869667e-07	1.770847e-06
TCGA-BP-4782-01A-02D-1421-08	156	90	66	71	4.230769e-01	2	all capture (no interval list)	65505363	19	71	2.900526e-07	1.083881e-06
TCGA-BP-4801-01A-02D-1421-08	119	69	50	55	4.201681e-01	2	all capture (no interval list)	65505363	14	55	2.137230e-07	8.396259e-07
TCGA-BP-4960-01A-01D-1462-08	131	65	66	51	5.038168e-01	2	all capture (no interval list)	65505363	14	50	2.137230e-07	7.632963e-07
TCGA-BP-4961-01A-01D-1462-08	103	38	65	27	6.310680e-01	2	all capture (no interval list)	65505363	11	27	1.679252e-07	4.121800e-07
TCGA-BP-4962-01A-01D-1462-08	101	45	56	40	5.544554e-01	2	all capture (no interval list)	65505363	4	37	6.106370e-08	5.648392e-07
TCGA-BP-4963-01A-01D-1462-08	168	92	76	62	4.523810e-01	2	all capture (no interval list)	65505363	30	60	4.579778e-07	9.159555e-07
TCGA-BP-4964-01A-01D-1462-08	189	99	90	76	4.761905e-01	2	all capture (no interval list)	65505363	22	75	3.358504e-07	1.144944e-06
TCGA-BP-4967-01A-01D-1462-08	148	78	70	56	4.729730e-01	2	all capture (no interval list)	65505363	22	55	3.358504e-07	8.396259e-07
TCGA-BP-4968-01A-01D-1462-08	115	55	60	41	5.217391e-01	2	all capture (no interval list)	65505363	14	40	2.137230e-07	6.106370e-07
TCGA-BP-4970-01A-01D-1462-08	72	35	37	27	5.138889e-01	2	all capture (no interval list)	65505363	7	27	1.068615e-07	4.121800e-07
TCGA-BP-4971-01A-01D-1462-08	115	49	66	32	5.739130e-01	2	all capture (no interval list)	65505363	17	32	2.595207e-07	4.885096e-07
TCGA-BP-4972-01A-01D-1462-08	129	50	79	35	6.124031e-01	2	all capture (no interval list)	65505363	14	35	2.137230e-07	5.343074e-07
TCGA-BP-4973-01A-01D-1462-08	91	29	62	25	6.813187e-01	2	all capture (no interval list)	65505363	4	24	6.106370e-08	3.663822e-07
TCGA-BP-4974-01A-01D-1462-08	97	34	63	27	6.494845e-01	2	all capture (no interval list)	65505363	6	27	9.159555e-08	4.121800e-07
TCGA-BP-4975-01A-01D-1462-08	96	24	72	15	7.500000e-01	2	all capture (no interval list)	65505363	7	15	1.068615e-07	2.289889e-07
TCGA-BP-4976-01A-01D-1462-08	157	102	55	77	3.503185e-01	2	all capture (no interval list)	65505363	25	76	3.816481e-07	1.160210e-06
TCGA-BP-4977-01A-01D-1462-08	112	45	67	36	5.982143e-01	2	all capture (no interval list)	65505363	9	36	1.373933e-07	5.495733e-07
TCGA-BP-4981-01A-01D-1462-08	135	58	77	41	5.703704e-01	2	all capture (no interval list)	65505363	17	40	2.595207e-07	6.106370e-07
TCGA-BP-4982-01A-01D-1462-08	103	42	61	32	5.922330e-01	2	all capture (no interval list)	65505363	10	32	1.526593e-07	4.885096e-07
TCGA-BP-4983-01A-01D-1462-08	160	98	62	72	3.875000e-01	2	all capture (no interval list)	65505363	26	72	3.969141e-07	1.099147e-06
TCGA-BP-4985-01A-01D-1462-08	170	101	69	73	4.058824e-01	2	all capture (no interval list)	65505363	27	72	4.121800e-07	1.099147e-06
TCGA-BP-4986-01A-01D-1462-08	116	44	72	34	6.206897e-01	2	all capture (no interval list)	65505363	10	33	1.526593e-07	5.037755e-07
TCGA-BP-4987-01A-01D-1462-08	80	22	58	15	7.250000e-01	2	all capture (no interval list)	65505363	7	15	1.068615e-07	2.289889e-07
TCGA-BP-4988-01A-01D-1462-08	112	62	50	47	4.464286e-01	2	all capture (no interval list)	65505363	15	44	2.289889e-07	6.717007e-07
TCGA-BP-4989-01A-01D-1462-08	147	74	73	56	4.965986e-01	2	all capture (no interval list)	65505363	18	56	2.747867e-07	8.548918e-07
TCGA-BP-4991-01A-01D-1462-08	113	48	65	33	5.752212e-01	2	all capture (no interval list)	65505363	15	32	2.289889e-07	4.885096e-07
TCGA-BP-4992-01A-01D-1462-08	122	52	70	40	5.737705e-01	2	all capture (no interval list)	65505363	12	38	1.831911e-07	5.801052e-07
TCGA-BP-4993-01A-02D-1421-08	132	77	55	56	4.166667e-01	2	all capture (no interval list)	65505363	21	56	3.205844e-07	8.548918e-07
TCGA-BP-4995-01A-01D-1462-08	107	51	56	35	5.233645e-01	2	all capture (no interval list)	65505363	16	34	2.442548e-07	5.190415e-07
TCGA-BP-4998-01A-01D-1462-08	112	48	64	37	5.714286e-01	2	all capture (no interval list)	65505363	9	36	1.373933e-07	5.495733e-07
TCGA-BP-4999-01A-01D-1462-08	111	47	64	36	5.765766e-01	2	all capture (no interval list)	65505363	11	35	1.679252e-07	5.343074e-07
TCGA-BP-5000-01A-01D-1462-08	89	40	49	25	5.505618e-01	2	all capture (no interval list)	65505363	15	25	2.289889e-07	3.816481e-07
TCGA-BP-5001-01A-01D-1462-08	84	41	43	30	5.119048e-01	2	all capture (no interval list)	65505363	11	30	1.679252e-07	4.579778e-07
TCGA-BP-5004-01A-01D-1462-08	108	41	67	33	6.203704e-01	2	all capture (no interval list)	65505363	8	33	1.221274e-07	5.037755e-07
TCGA-BP-5006-01A-01D-1462-08	94	42	52	37	5.531915e-01	2	all capture (no interval list)	65505363	5	34	7.632963e-08	5.190415e-07
TCGA-BP-5007-01A-01D-1462-08	104	37	67	28	6.442308e-01	2	all capture (no interval list)	65505363	9	26	1.373933e-07	3.969141e-07
TCGA-BP-5008-01A-01D-1462-08	88	41	47	34	5.340909e-01	2	all capture (no interval list)	65505363	7	34	1.068615e-07	5.190415e-07
TCGA-BP-5009-01A-01D-1462-08	101	47	54	39	5.346535e-01	2	all capture (no interval list)	65505363	8	39	1.221274e-07	5.953711e-07
TCGA-BP-5010-01A-02D-1421-08	118	68	50	53	4.237288e-01	2	all capture (no interval list)	65505363	15	52	2.289889e-07	7.938281e-07
TCGA-BP-5168-01A-01D-1421-08	259	149	110	110	4.247104e-01	2	all capture (no interval list)	65505363	39	109	5.953711e-07	1.663986e-06
TCGA-BP-5169-01A-01D-1429-08	120	56	64	46	5.333333e-01	2	all capture (no interval list)	65505363	10	46	1.526593e-07	7.022326e-07
TCGA-BP-5170-01A-01D-1429-08	147	64	83	51	5.646259e-01	2	all capture (no interval list)	65505363	13	49	1.984570e-07	7.480304e-07
TCGA-BP-5173-01A-01D-1429-08	187	93	94	69	5.026738e-01	2	all capture (no interval list)	65505363	23	66	3.511163e-07	1.007551e-06
TCGA-BP-5174-01A-01D-1429-08	129	51	78	42	6.046512e-01	2	all capture (no interval list)	65505363	9	42	1.373933e-07	6.411689e-07
TCGA-BP-5175-01A-01D-1429-08	111	53	58	38	5.225225e-01	2	all capture (no interval list)	65505363	15	38	2.289889e-07	5.801052e-07
TCGA-BP-5176-01A-01D-1429-08	226	128	98	93	4.336283e-01	2	all capture (no interval list)	65505363	35	93	5.343074e-07	1.419731e-06
TCGA-BP-5177-01A-01D-1429-08	110	41	69	31	6.272727e-01	2	all capture (no interval list)	65505363	10	31	1.526593e-07	4.732437e-07
TCGA-BP-5178-01A-01D-1429-08	112	63	49	46	4.375000e-01	2	all capture (no interval list)	65505363	17	46	2.595207e-07	7.022326e-07
TCGA-BP-5180-01A-01D-1429-08	91	45	46	39	5.054945e-01	2	all capture (no interval list)	65505363	6	39	9.159555e-08	5.953711e-07
TCGA-BP-5182-01A-01D-1429-08	159	75	84	59	5.283019e-01	2	all capture (no interval list)	65505363	16	59	2.442548e-07	9.006896e-07
TCGA-BP-5183-01A-01D-1429-08	158	67	91	50	5.759494e-01	2	all capture (no interval list)	65505363	16	50	2.442548e-07	7.632963e-07
TCGA-BP-5184-01A-01D-1429-08	118	43	75	28	6.355932e-01	2	all capture (no interval list)	65505363	15	26	2.289889e-07	3.969141e-07
TCGA-BP-5185-01A-01D-1429-08	187	100	87	81	4.652406e-01	2	all capture (no interval list)	65505363	18	81	2.747867e-07	1.236540e-06
TCGA-BP-5186-01A-01D-1429-08	112	45	67	33	5.982143e-01	2	all capture (no interval list)	65505363	12	32	1.831911e-07	4.885096e-07
TCGA-BP-5187-01A-01D-1429-08	142	92	50	69	3.521127e-01	2	all capture (no interval list)	65505363	23	69	3.511163e-07	1.053349e-06
TCGA-BP-5189-01A-02D-1429-08	120	67	53	55	4.416667e-01	2	all capture (no interval list)	65505363	12	55	1.831911e-07	8.396259e-07
TCGA-BP-5190-01A-01D-1429-08	151	59	92	45	6.092715e-01	2	all capture (no interval list)	65505363	14	45	2.137230e-07	6.869667e-07
TCGA-BP-5191-01A-01D-1429-08	148	74	74	55	5.000000e-01	2	all capture (no interval list)	65505363	19	55	2.900526e-07	8.396259e-07
TCGA-BP-5192-01A-01D-1429-08	164	86	78	64	4.756098e-01	2	all capture (no interval list)	65505363	22	64	3.358504e-07	9.770192e-07
TCGA-BP-5194-01A-02D-1429-08	93	36	57	24	6.129032e-01	2	all capture (no interval list)	65505363	12	24	1.831911e-07	3.663822e-07
TCGA-BP-5195-01A-02D-1429-08	175	91	84	73	4.800000e-01	2	all capture (no interval list)	65505363	16	72	2.442548e-07	1.099147e-06
TCGA-BP-5196-01A-01D-1429-08	123	56	67	39	5.447154e-01	2	all capture (no interval list)	65505363	16	37	2.442548e-07	5.648392e-07
TCGA-BP-5198-01A-01D-1429-08	153	96	57	77	3.725490e-01	2	all capture (no interval list)	65505363	18	76	2.747867e-07	1.160210e-06
TCGA-BP-5199-01A-01D-1429-08	145	94	51	73	3.517241e-01	2	all capture (no interval list)	65505363	21	73	3.205844e-07	1.114413e-06
TCGA-BP-5200-01A-01D-1429-08	139	57	82	44	5.899281e-01	2	all capture (no interval list)	65505363	12	41	1.831911e-07	6.259030e-07
TCGA-BP-5201-01A-01D-1429-08	96	50	46	44	4.791667e-01	2	all capture (no interval list)	65505363	6	43	9.159555e-08	6.564348e-07
TCGA-BP-5202-01A-02D-1429-08	145	51	94	42	6.482759e-01	2	all capture (no interval list)	65505363	8	42	1.221274e-07	6.411689e-07
TCGA-CJ-4634-01A-02D-1386-10	377	111	266	77	7.055703e-01	2	all capture (no interval list)	65505363	34	73	5.190415e-07	1.114413e-06
TCGA-CJ-4636-01A-02D-1386-10	497	105	392	79	7.887324e-01	2	all capture (no interval list)	65505363	24	78	3.663822e-07	1.190742e-06
TCGA-CJ-4637-01A-02D-1386-10	425	49	376	31	8.847059e-01	2	all capture (no interval list)	65505363	17	29	2.595207e-07	4.427118e-07
TCGA-CJ-4638-01A-02D-1386-10	289	91	198	67	6.851211e-01	2	all capture (no interval list)	65505363	24	62	3.663822e-07	9.464874e-07
TCGA-CJ-4639-01A-02D-1386-10	240	100	140	78	5.833333e-01	2	all capture (no interval list)	65505363	21	73	3.205844e-07	1.114413e-06
TCGA-CJ-4640-01A-02D-1386-10	183	90	93	66	5.081967e-01	2	all capture (no interval list)	65505363	19	61	2.900526e-07	9.312215e-07
TCGA-CJ-4641-01A-02D-1386-10	285	111	174	78	6.105263e-01	2	all capture (no interval list)	65505363	33	74	5.037755e-07	1.129678e-06
TCGA-CJ-4643-01A-02D-1386-10	343	76	267	55	7.784257e-01	2	all capture (no interval list)	65505363	18	52	2.747867e-07	7.938281e-07
TCGA-CJ-4644-01A-02D-1386-10	381	155	226	113	5.931759e-01	2	all capture (no interval list)	65505363	36	98	5.495733e-07	1.496061e-06
TCGA-CJ-4882-01A-02D-1429-08	169	82	87	61	5.147929e-01	2	all capture (no interval list)	65505363	21	60	3.205844e-07	9.159555e-07
TCGA-CJ-4897-01A-03D-1429-08	138	71	67	49	4.855072e-01	2	all capture (no interval list)	65505363	22	46	3.358504e-07	7.022326e-07
TCGA-CJ-4899-01A-01D-1462-08	105	46	59	36	5.619048e-01	2	all capture (no interval list)	65505363	10	36	1.526593e-07	5.495733e-07
TCGA-CJ-4901-01A-01D-1429-08	152	75	77	63	5.065789e-01	2	all capture (no interval list)	65505363	12	61	1.831911e-07	9.312215e-07
TCGA-CJ-4902-01A-01D-1429-08	138	91	47	75	3.405797e-01	2	all capture (no interval list)	65505363	15	73	2.289889e-07	1.114413e-06
TCGA-CJ-4903-01A-01D-1429-08	150	63	87	49	5.800000e-01	2	all capture (no interval list)	65505363	14	48	2.137230e-07	7.327644e-07
TCGA-CJ-4904-01A-02D-1429-08	133	77	56	59	4.210526e-01	2	all capture (no interval list)	65505363	18	57	2.747867e-07	8.701578e-07
TCGA-CJ-4905-01A-02D-1429-08	138	67	71	46	5.144928e-01	2	all capture (no interval list)	65505363	21	45	3.205844e-07	6.869667e-07
TCGA-CJ-4907-01A-01D-1429-08	146	83	63	63	4.315068e-01	2	all capture (no interval list)	65505363	20	62	3.053185e-07	9.464874e-07
TCGA-CJ-4908-01A-01D-1429-08	99	39	60	27	6.060606e-01	2	all capture (no interval list)	65505363	12	27	1.831911e-07	4.121800e-07
TCGA-CJ-4912-01A-01D-1429-08	180	93	87	70	4.833333e-01	2	all capture (no interval list)	65505363	23	68	3.511163e-07	1.038083e-06
TCGA-CJ-4913-01A-01D-1429-08	110	72	38	53	3.454545e-01	2	all capture (no interval list)	65505363	17	52	2.595207e-07	7.938281e-07
TCGA-CJ-4916-01A-01D-1429-08	112	73	39	57	3.482143e-01	2	all capture (no interval list)	65505363	16	57	2.442548e-07	8.701578e-07
TCGA-CJ-4918-01A-01D-1429-08	172	89	83	68	4.825581e-01	2	all capture (no interval list)	65505363	20	67	3.053185e-07	1.022817e-06
TCGA-CJ-4920-01A-01D-1429-08	283	163	120	132	4.240283e-01	2	all capture (no interval list)	65505363	30	128	4.579778e-07	1.954038e-06
TCGA-CJ-4923-01A-01D-1429-08	128	65	63	51	4.921875e-01	2	all capture (no interval list)	65505363	13	49	1.984570e-07	7.480304e-07
TCGA-CJ-5671-01A-11D-1534-10	567	108	459	74	8.095238e-01	2	all capture (no interval list)	65505363	32	69	4.885096e-07	1.053349e-06
TCGA-CJ-5672-01A-11D-1534-10	580	135	445	103	7.672414e-01	2	all capture (no interval list)	65505363	32	97	4.885096e-07	1.480795e-06
TCGA-CJ-5675-01A-11D-1534-10	537	107	430	76	8.007449e-01	2	all capture (no interval list)	65505363	31	74	4.732437e-07	1.129678e-06
TCGA-CJ-5676-01A-11D-1534-10	540	105	435	69	8.055556e-01	2	all capture (no interval list)	65505363	36	68	5.495733e-07	1.038083e-06
TCGA-CJ-5677-01A-11D-1534-10	465	129	336	94	7.225806e-01	2	all capture (no interval list)	65505363	34	93	5.190415e-07	1.419731e-06
TCGA-CJ-5678-01A-11D-1534-10	647	58	589	44	9.103555e-01	3	all genome (WGS)	34834024	14	41	4.019059e-07	1.177010e-06
TCGA-CJ-5679-01A-11D-1534-10	837	143	694	115	8.291517e-01	2	all capture (no interval list)	65505363	26	107	3.969141e-07	1.633454e-06
TCGA-CJ-5680-01A-11D-1534-10	417	43	374	35	8.968825e-01	2	all capture (no interval list)	65505363	7	33	1.068615e-07	5.037755e-07
TCGA-CJ-5681-01A-11D-1534-10	1132	97	1035	69	9.143110e-01	3	all genome (WGS)	34834024	28	60	8.038118e-07	1.722454e-06
TCGA-CJ-5682-01A-11D-1534-10	937	136	801	104	8.548559e-01	2	all capture (no interval list)	65505363	30	99	4.579778e-07	1.511327e-06
TCGA-CJ-5683-01A-11D-1534-10	1276	137	1139	103	8.926332e-01	2	all capture (no interval list)	65505363	31	97	4.732437e-07	1.480795e-06
TCGA-CJ-5684-01A-11D-1534-10	1227	130	1097	89	8.940505e-01	2	all capture (no interval list)	65505363	38	81	5.801052e-07	1.236540e-06
TCGA-CJ-5686-01A-11D-1669-08	116	70	46	50	3.965517e-01	2	all capture (no interval list)	65505363	20	47	3.053185e-07	7.174985e-07
TCGA-CJ-6027-01A-11D-1669-08	148	90	58	70	3.918919e-01	2	all capture (no interval list)	65505363	20	69	3.053185e-07	1.053349e-06
TCGA-CJ-6028-01A-11D-1669-08	105	71	34	50	3.238095e-01	2	all capture (no interval list)	65505363	21	49	3.205844e-07	7.480304e-07
TCGA-CJ-6030-01A-11D-1669-08	168	119	49	91	2.916667e-01	1	exome+100bp flanks	34834024	28	91	8.038118e-07	2.612388e-06
TCGA-CJ-6031-01A-11D-1669-08	126	87	39	71	3.095238e-01	2	all capture (no interval list)	65505363	16	71	2.442548e-07	1.083881e-06
TCGA-CJ-6032-01A-11D-1669-08	109	64	45	50	4.128440e-01	2	all capture (no interval list)	65505363	14	48	2.137230e-07	7.327644e-07
TCGA-CJ-6033-01A-11D-1669-08	139	99	40	71	2.877698e-01	1	exome+100bp flanks	34834024	27	71	7.751042e-07	2.038237e-06
TCGA-CW-5580-01A-01D-1669-08	184	129	55	79	2.989130e-01	1	exome+100bp flanks	34834024	48	78	1.377963e-06	2.239190e-06
TCGA-CW-5581-01A-02D-1534-10	1515	129	1386	96	9.148515e-01	3	all genome (WGS)	34834024	33	94	9.473496e-07	2.698511e-06
TCGA-CW-5583-01A-02D-1534-10	1395	33	1362	24	9.763441e-01	3	all genome (WGS)	34834024	8	22	2.296605e-07	6.315664e-07
TCGA-CW-5584-01A-01D-1534-10	1324	70	1254	54	9.471299e-01	3	all genome (WGS)	34834024	15	49	4.306135e-07	1.406671e-06
TCGA-CW-5585-01A-01D-1534-10	1069	72	997	53	9.326473e-01	3	all genome (WGS)	34834024	19	53	5.454437e-07	1.521501e-06
TCGA-CW-5588-01A-01D-1534-10	511	110	401	82	7.847358e-01	2	all capture (no interval list)	65505363	23	78	3.511163e-07	1.190742e-06
TCGA-CW-5589-01A-01D-1534-10	641	117	524	80	8.174727e-01	2	all capture (no interval list)	65505363	31	74	4.732437e-07	1.129678e-06
TCGA-CW-5591-01A-01D-1534-10	1805	90	1715	68	9.501385e-01	3	all genome (WGS)	34834024	22	60	6.315664e-07	1.722454e-06
TCGA-CW-6087-01A-11D-1669-08	133	97	36	72	2.706767e-01	1	exome+100bp flanks	34834024	25	71	7.176891e-07	2.038237e-06
TCGA-CW-6090-01A-11D-1669-08	177	114	63	77	3.559322e-01	2	all capture (no interval list)	65505363	36	76	5.495733e-07	1.160210e-06
TCGA-CW-6093-01A-11D-1669-08	179	134	45	99	2.513966e-01	1	exome+100bp flanks	34834024	34	99	9.760572e-07	2.842049e-06
TCGA-CZ-4853-01A-01D-1429-08	213	113	100	86	4.694836e-01	2	all capture (no interval list)	65505363	26	85	3.969141e-07	1.297604e-06
TCGA-CZ-4856-01A-02D-1429-08	130	65	65	53	5.000000e-01	2	all capture (no interval list)	65505363	12	53	1.831911e-07	8.090941e-07
TCGA-CZ-4859-01A-02D-1429-08	214	113	101	89	4.719626e-01	2	all capture (no interval list)	65505363	24	88	3.663822e-07	1.343401e-06
TCGA-CZ-4863-01A-01D-1501-10	234	55	179	39	7.649573e-01	2	all capture (no interval list)	65505363	16	37	2.442548e-07	5.648392e-07
TCGA-CZ-4866-01A-01D-1501-10	594	76	518	62	8.720539e-01	2	all capture (no interval list)	65505363	13	59	1.984570e-07	9.006896e-07
TCGA-CZ-5451-01A-01D-1501-10	751	138	613	107	8.162450e-01	2	all capture (no interval list)	65505363	31	105	4.732437e-07	1.602922e-06
TCGA-CZ-5452-01A-01D-1501-10	540	59	481	41	8.907407e-01	2	all capture (no interval list)	65505363	17	40	2.595207e-07	6.106370e-07
TCGA-CZ-5453-01A-01D-1501-10	900	141	759	105	8.433333e-01	2	all capture (no interval list)	65505363	36	100	5.495733e-07	1.526593e-06
TCGA-CZ-5454-01A-01D-1501-10	684	36	648	23	9.473684e-01	3	all genome (WGS)	34834024	13	21	3.731983e-07	6.028589e-07
TCGA-CZ-5456-01A-01D-1501-10	663	141	522	108	7.873303e-01	2	all capture (no interval list)	65505363	31	107	4.732437e-07	1.633454e-06
TCGA-CZ-5457-01A-01D-1501-10	967	86	881	67	9.110651e-01	3	all genome (WGS)	34834024	17	65	4.880286e-07	1.865992e-06
TCGA-CZ-5458-01A-01D-1501-10	644	75	569	55	8.835404e-01	2	all capture (no interval list)	65505363	18	52	2.747867e-07	7.938281e-07
TCGA-CZ-5459-01A-01D-1501-10	379	136	243	103	6.411609e-01	2	all capture (no interval list)	65505363	33	98	5.037755e-07	1.496061e-06
TCGA-CZ-5460-01A-01D-1501-10	273	75	198	56	7.252747e-01	2	all capture (no interval list)	65505363	17	53	2.595207e-07	8.090941e-07
TCGA-CZ-5461-01A-01D-1501-10	290	103	187	85	6.448276e-01	2	all capture (no interval list)	65505363	17	82	2.595207e-07	1.251806e-06
TCGA-CZ-5462-01A-01D-1501-10	426	88	338	67	7.934272e-01	2	all capture (no interval list)	65505363	18	66	2.747867e-07	1.007551e-06
TCGA-CZ-5463-01A-01D-1501-10	374	64	310	50	8.288770e-01	2	all capture (no interval list)	65505363	14	48	2.137230e-07	7.327644e-07
TCGA-CZ-5464-01A-01D-1501-10	415	76	339	53	8.168675e-01	2	all capture (no interval list)	65505363	21	43	3.205844e-07	6.564348e-07
TCGA-CZ-5465-01A-01D-1806-10	294	125	169	97	5.748299e-01	2	all capture (no interval list)	65505363	26	93	3.969141e-07	1.419731e-06
TCGA-CZ-5466-01A-01D-1501-10	510	105	405	70	7.941176e-01	2	all capture (no interval list)	65505363	33	69	5.037755e-07	1.053349e-06
TCGA-CZ-5467-01A-01D-1501-10	416	94	322	64	7.740385e-01	2	all capture (no interval list)	65505363	29	64	4.427118e-07	9.770192e-07
TCGA-CZ-5468-01A-01D-1501-10	516	152	364	118	7.054264e-01	2	all capture (no interval list)	65505363	32	112	4.885096e-07	1.709784e-06
TCGA-CZ-5469-01A-01D-1501-10	498	89	409	67	8.212851e-01	2	all capture (no interval list)	65505363	22	64	3.358504e-07	9.770192e-07
TCGA-CZ-5470-01A-01D-1501-10	336	119	217	98	6.458333e-01	2	all capture (no interval list)	65505363	20	94	3.053185e-07	1.434997e-06
TCGA-CZ-5982-01A-11D-1669-08	95	66	29	53	3.052632e-01	2	all capture (no interval list)	65505363	13	53	1.984570e-07	8.090941e-07
TCGA-CZ-5984-01A-11D-1669-08	81	56	25	38	3.086420e-01	2	all capture (no interval list)	65505363	18	37	2.747867e-07	5.648392e-07
TCGA-CZ-5985-01A-11D-1669-08	116	68	48	52	4.137931e-01	2	all capture (no interval list)	65505363	14	50	2.137230e-07	7.632963e-07
TCGA-CZ-5986-01A-11D-1669-08	118	59	59	44	5.000000e-01	2	all capture (no interval list)	65505363	15	42	2.289889e-07	6.411689e-07
TCGA-CZ-5987-01A-11D-1669-08	102	64	38	51	3.725490e-01	2	all capture (no interval list)	65505363	13	50	1.984570e-07	7.632963e-07
TCGA-CZ-5988-01A-11D-1669-08	87	54	33	36	3.793103e-01	2	all capture (no interval list)	65505363	18	35	2.747867e-07	5.343074e-07
TCGA-CZ-5989-01A-11D-1669-08	84	49	35	35	4.166667e-01	2	all capture (no interval list)	65505363	14	35	2.137230e-07	5.343074e-07
TCGA-EU-5904-01A-11D-1669-08	107	66	41	46	3.831776e-01	2	all capture (no interval list)	65505363	19	45	2.900526e-07	6.869667e-07
TCGA-EU-5905-01A-11D-1669-08	105	58	47	46	4.476190e-01	2	all capture (no interval list)	65505363	11	46	1.679252e-07	7.022326e-07
TCGA-EU-5906-01A-11D-1669-08	132	82	50	63	3.787879e-01	2	all capture (no interval list)	65505363	19	63	2.900526e-07	9.617533e-07
TCGA-EU-5907-01A-11D-1669-08	105	65	40	50	3.809524e-01	2	all capture (no interval list)	65505363	15	49	2.289889e-07	7.480304e-07