Clinical Features Time to Death AGE PRIMARY.SITE.OF.DISEASE KARNOFSKY.PERFORMANCE.SCORE TUMOR.STAGE RADIATIONS.RADIATION.REGIMENINDICATION COMPLETENESS.OF.RESECTION nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 0 (0%) 458 0.086584 1 0.84314 1 0.15463 1 0.12641 1 0.12514 1 0.089551 1 0.078522 1 1q gain 0 (0%) 402 0.28623 1 0.035491 1 0.067972 1 0.033077 1 0.13365 1 1 1 1 1 2p gain 0 (0%) 434 0.029319 1 2.5942e-07 0.000143 1 1 0.95552 1 0.96583 1 0.54019 1 1 1 2q gain 0 (0%) 460 0.10441 1 0.00053593 0.291 1 1 0.68973 1 0.6644 1 0.086357 1 1 1 3p gain 0 (0%) 453 0.42617 1 0.035555 1 0.57493 1 0.73023 1 0.81426 1 1 1 0.44737 1 3q gain 0 (0%) 357 0.64774 1 8.5044e-07 0.000467 0.1256 1 0.6712 1 0.52555 1 0.5573 1 0.095808 1 4p gain 0 (0%) 531 0.27196 1 0.57883 1 1 1 0.9211 1 0.78177 1 1 1 1 1 4q gain 0 (0%) 546 0.22977 1 0.04472 1 1 1 0.9211 1 0.79531 1 1 1 NA NA 5p gain 0 (0%) 418 0.46467 1 0.24332 1 0.12396 1 0.79052 1 0.87874 1 1 1 0.44737 1 5q gain 0 (0%) 529 0.3145 1 0.93901 1 0.20693 1 0.13656 1 0.87389 1 1 1 0.14646 1 6p gain 0 (0%) 442 0.38895 1 0.0064727 1 0.61901 1 0.033715 1 0.053447 1 1 1 1 1 6q gain 0 (0%) 500 0.52286 1 0.052586 1 1 1 0.19537 1 0.0094211 1 1 1 0.59564 1 7p gain 0 (0%) 438 0.19314 1 0.0015884 0.861 1 1 0.29183 1 0.48517 1 1 1 1 1 7q gain 0 (0%) 412 0.17793 1 0.011094 1 0.71137 1 0.27589 1 0.18893 1 0.56842 1 0.74677 1 8p gain 0 (0%) 476 0.077519 1 0.67786 1 1 1 0.89448 1 0.4286 1 0.393 1 1 1 8q gain 0 (0%) 359 0.1799 1 0.60101 1 0.24939 1 0.88008 1 0.2652 1 1 1 0.063584 1 9p gain 0 (0%) 503 0.7543 1 0.7695 1 1 1 0.95 1 0.69389 1 1 1 0.59564 1 9q gain 0 (0%) 535 0.93684 1 0.72992 1 1 1 NA NA 0.44617 1 1 1 1 1 10p gain 0 (0%) 432 0.20463 1 1.2297e-05 0.00669 0.10731 1 0.18371 1 0.86291 1 1 1 0.48149 1 10q gain 0 (0%) 495 0.44421 1 0.016283 1 0.40495 1 0.40265 1 0.39259 1 1 1 0.38908 1 11p gain 0 (0%) 522 0.58443 1 0.84491 1 1 1 0.85189 1 0.11966 1 1 1 1 1 11q gain 0 (0%) 501 0.2854 1 0.4658 1 1 1 0.56601 1 0.26792 1 1 1 0.28023 1 12p gain 0 (0%) 355 0.26036 1 3.846e-08 2.12e-05 0.1248 1 0.030182 1 0.0044237 1 1 1 0.73374 1 12q gain 0 (0%) 440 0.10223 1 1.5691e-06 0.000858 0.61547 1 0.031174 1 0.062024 1 0.52081 1 0.49357 1 13q gain 0 (0%) 521 0.71851 1 0.019684 1 1 1 0.47649 1 0.32279 1 0.20362 1 1 1 14q gain 0 (0%) 529 0.30235 1 0.79194 1 1 1 0.49661 1 0.53845 1 0.16629 1 0.28023 1 15q gain 0 (0%) 537 0.86532 1 0.3558 1 1 1 NA NA 0.032033 1 1 1 0.53902 1 16p gain 0 (0%) 531 0.62133 1 0.47255 1 1 1 0.23207 1 0.18914 1 1 1 0.10693 1 16q gain 0 (0%) 546 0.67245 1 0.74816 1 1 1 NA NA 0.35892 1 1 1 0.26463 1 17p gain 0 (0%) 551 0.16219 1 0.078893 1 1 1 0.76749 1 0.56437 1 1 1 NA NA 17q gain 0 (0%) 539 0.097091 1 0.17724 1 1 1 0.61433 1 0.57519 1 1 1 NA NA 18p gain 0 (0%) 488 0.15463 1 0.16708 1 1 1 0.34056 1 0.0089016 1 1 1 0.67323 1 18q gain 0 (0%) 521 0.33197 1 0.34276 1 1 1 0.25158 1 0.078287 1 0.20362 1 1 1 19p gain 0 (0%) 464 0.31752 1 0.014941 1 1 1 0.99553 1 0.26074 1 0.43785 1 0.39345 1 19q gain 0 (0%) 471 0.13944 1 0.014959 1 1 1 0.64903 1 0.28576 1 0.41196 1 0.31695 1 20p gain 0 (0%) 329 0.1419 1 3.1814e-06 0.00174 1 1 0.10467 1 0.19292 1 0.57277 1 1 1 20q gain 0 (0%) 290 0.10764 1 1.1117e-06 0.000609 1 1 0.22886 1 0.081383 1 0.61265 1 1 1 21q gain 0 (0%) 492 0.0056853 1 0.013819 1 0.40495 1 0.56601 1 0.86753 1 1 1 0.38908 1 22q gain 0 (0%) 553 0.59318 1 0.29412 1 1 1 NA NA 0.39123 1 1 1 1 1 Xq gain 0 (0%) 528 0.092719 1 0.20557 1 1 1 0.13656 1 0.9745 1 1 1 1 1 1p loss 0 (0%) 528 0.85047 1 0.41803 1 1 1 0.29569 1 0.70874 1 0.17102 1 1 1 1q loss 0 (0%) 540 0.33757 1 0.089613 1 1 1 0.21989 1 0.3609 1 0.11309 1 NA NA 2p loss 0 (0%) 536 0.5871 1 0.83541 1 1 1 0.073101 1 0.47426 1 1 1 1 1 2q loss 0 (0%) 532 0.72912 1 0.46101 1 0.2008 1 0.073101 1 0.34445 1 1 1 0.53902 1 3p loss 0 (0%) 503 0.2471 1 0.13662 1 0.36458 1 0.32052 1 0.69519 1 0.28349 1 0.26463 1 3q loss 0 (0%) 539 0.13949 1 0.83701 1 0.15694 1 0.60692 1 0.17274 1 0.11802 1 0.34146 1 4p loss 0 (0%) 303 0.24797 1 0.34413 1 0.16643 1 0.10638 1 0.36904 1 0.5973 1 1 1 4q loss 0 (0%) 262 0.39354 1 0.19534 1 0.751 1 0.95178 1 0.25573 1 1 1 1 1 5p loss 0 (0%) 479 0.27457 1 0.03048 1 0.47542 1 0.22689 1 0.33196 1 1 1 1 1 5q loss 0 (0%) 392 0.51247 1 0.13475 1 0.35263 1 0.41962 1 0.27931 1 1 1 1 1 6p loss 0 (0%) 437 0.10207 1 0.0049043 1 0.63291 1 0.64693 1 0.45321 1 0.53057 1 0.38908 1 6q loss 0 (0%) 368 0.4019 1 0.006934 1 0.11594 1 0.3094 1 0.37356 1 1 1 1 1 7p loss 0 (0%) 472 0.11435 1 0.97553 1 0.50608 1 0.033577 1 0.16607 1 1 1 0.10693 1 7q loss 0 (0%) 514 0.036885 1 0.24403 1 0.30575 1 0.0033924 1 0.93884 1 0.23535 1 0.11098 1 8p loss 0 (0%) 330 0.30941 1 0.031776 1 0.1458 1 0.03879 1 0.4208 1 1 1 1 1 8q loss 0 (0%) 500 0.36712 1 0.026283 1 1 1 0.33113 1 0.025827 1 1 1 0.59564 1 9p loss 0 (0%) 350 0.61943 1 0.035609 1 0.13043 1 0.47871 1 0.48316 1 0.55999 1 0.30722 1 9q loss 0 (0%) 322 0.55181 1 4.0786e-06 0.00222 0.15233 1 0.77928 1 0.24503 1 0.57849 1 0.73374 1 10p loss 0 (0%) 496 0.67316 1 0.18179 1 1 1 0.75299 1 0.85351 1 0.31305 1 0.67323 1 10q loss 0 (0%) 472 0.96718 1 0.33613 1 1 1 0.80937 1 0.46008 1 0.0039923 1 1 1 11p loss 0 (0%) 418 0.63545 1 0.035768 1 1 1 0.74134 1 0.45836 1 1 1 1 1 11q loss 0 (0%) 454 0.87185 1 0.14569 1 0.57493 1 0.17046 1 0.34902 1 0.47349 1 0.64481 1 12p loss 0 (0%) 512 0.8005 1 0.11513 1 1 1 0.11311 1 0.022329 1 1 1 0.53902 1 12q loss 0 (0%) 488 0.30375 1 0.42899 1 1 1 0.69493 1 0.0058386 1 1 1 1 1 13q loss 0 (0%) 305 0.32639 1 0.86512 1 0.45804 1 0.68273 1 0.16699 1 1 1 1 1 14q loss 0 (0%) 400 0.43393 1 0.1147 1 1 1 0.70599 1 0.047413 1 0.56068 1 1 1 15q loss 0 (0%) 346 0.82593 1 0.05159 1 0.27276 1 0.64955 1 0.12828 1 0.56189 1 1 1 16p loss 0 (0%) 294 0.13189 1 0.95319 1 0.47333 1 0.2593 1 0.18132 1 0.60773 1 0.33218 1 16q loss 0 (0%) 206 0.19411 1 0.0036687 1 0.78219 1 0.053564 1 0.34384 1 1 1 1 1 17p loss 0 (0%) 138 0.94943 1 0.014744 1 0.25522 1 0.88342 1 0.1356 1 0.57132 1 0.71167 1 17q loss 0 (0%) 234 0.49108 1 0.059741 1 1 1 0.054666 1 0.66126 1 0.26968 1 1 1 18p loss 0 (0%) 379 0.48317 1 0.88288 1 0.79483 1 0.75229 1 0.10722 1 0.24863 1 1 1 18q loss 0 (0%) 329 0.50967 1 0.79795 1 0.76471 1 0.65021 1 0.41111 1 0.57277 1 0.74171 1 19p loss 0 (0%) 419 0.87992 1 0.12436 1 0.69081 1 0.48502 1 0.56731 1 1 1 0.12301 1 19q loss 0 (0%) 419 0.75767 1 0.7565 1 0.69081 1 0.40704 1 0.77092 1 0.57444 1 0.13084 1 20p loss 0 (0%) 525 0.030658 1 0.2031 1 1 1 0.0033924 1 0.80574 1 0.1851 1 0.11098 1 20q loss 0 (0%) 540 0.040559 1 0.78572 1 1 1 0.0033924 1 0.63189 1 1 1 NA NA 21q loss 0 (0%) 414 0.6797 1 0.92135 1 1 1 0.50848 1 0.51946 1 1 1 0.69245 1 22q loss 0 (0%) 177 0.24605 1 0.21135 1 0.38158 1 0.95388 1 0.17623 1 0.55537 1 0.1053 1 Xq loss 0 (0%) 462 0.24365 1 0.71205 1 0.54752 1 0.48502 1 0.88105 1 1 1 0.20475 1