Clinical Features MRNA_CNMF MRNA_CHIERARCHICAL MIR_CNMF MIR_CHIERARCHICAL CN_CNMF METHLYATION_CNMF RPPA_CNMF RPPA_CHIERARCHICAL MRNASEQ_CNMF MRNASEQ_CHIERARCHICAL MIRSEQ_CNMF MIRSEQ_CHIERARCHICAL nMutated (%) nWild-Type Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q TP53 276 (87%) 40 0.66728 1 0.36635 1 0.50175 1 0.36657 1 0.71561 1 0.70204 1 0.41061 1 0.31311 1 0.77943 1 0.89787 1 0.32592 1 0.18594 1 SRC 4 (1%) 312 0.83603 1 0.68321 1 0.56597 1 0.16046 1 0.12735 1 0.46157 1 NA NA NA NA NA NA NA NA 0.48287 1 0.32454 1 TBP 4 (1%) 312 1 1 1 1 0.69216 1 0.59585 1 0.035729 1 0.018381 1 0.13122 1 0.87235 1 1 1 1 1 0.68868 1 1 1 RB1 9 (3%) 307 0.75775 1 0.11782 1 0.40222 1 0.71152 1 0.77553 1 0.19878 1 0.89173 1 0.81822 1 NA NA NA NA 0.35835 1 0.5567 1 GABRA6 6 (2%) 310 0.88183 1 0.76951 1 1 1 0.71996 1 0.29046 1 0.21205 1 0.39774 1 1 1 0.79081 1 0.77976 1 1 1 1 1 BRCA1 12 (4%) 304 0.17273 1 0.81418 1 0.25589 1 0.17221 1 0.50568 1 0.29788 1 0.48824 1 0.18365 1 1 1 0.89277 1 0.71793 1 0.78378 1 CSMD3 18 (6%) 298 0.34066 1 0.71156 1 0.23982 1 0.2959 1 0.51566 1 0.05673 1 0.045728 1 0.61565 1 0.78629 1 0.70446 1 0.18326 1 0.84863 1 NF1 14 (4%) 302 0.42483 1 0.44968 1 0.83635 1 0.46781 1 0.6996 1 0.18759 1 0.11192 1 0.035051 1 0.43353 1 0.14463 1 0.73632 1 1 1