Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	table.1.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D57V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D40V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D37V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D29V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D45V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D36V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D33V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D12V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D43V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D5V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D6V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D63V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D27V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D58V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D25V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D56V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D13V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D55V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D34V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D15V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D23V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D35V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D8V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D62V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D33V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D58V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	table.1.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D57V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D40V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D37V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D29V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D45V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D36V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D33V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D12V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D43V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D5V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D6V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D63V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D27V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D58V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D25V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D56V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D13V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D55V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D34V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D15V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D23V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D35V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D8V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D62V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D33V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	BRCA-TP.clin.merged.picked.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:19	Correlate_Clinical_vs_CopyNumber_Focal_2013052300	D58V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2013052300.0.0	yes
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