
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.85.4149/Clusters2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.85.4149/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering_new/BRCA-TP/3539982/BRCA-TP.mergedcluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPicker/BRCA-TP/3349242/BRCA-TP.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ALL", "-oT=", "-nV=Nozzle.R1", "-OP=AGGREGRATED_CLUSTER", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"  "-oT="
[1] "opt"                     "-OP=AGGREGRATED_CLUSTER"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"                 "AGGREGRATED_CLUSTER"
[1] "dx" ""  

nPatients in clinical file=903, in cluster file=950, common to both=901
[1]  12 901
[1] "MRNA_CNMF"
[1] 3
  1   2   3   4   5   6   7   8 
 21  39 121 101 110  74  20  40 
  1   2   3   4   5   6   7   8 
 21  39 121 101 110  74  20  40 
[1] "MRNA_CHIERARCHICAL"
[1] 3
  1   2   3 
124 131 271 
  1   2   3 
124 131 271 
[1] "CN_CNMF"
[1] 3
  1   2   3   4   5 
331 207  65 231  51 
  1   2   3   4   5 
331 207  65 231  51 
[1] "METHLYATION_CNMF"
[1] 3
  1   2   3   4   5   6 
 97 144  94 120  36  86 
  1   2   3   4   5   6 
 97 144  94 120  36  86 
[1] "RPPA_CNMF"
[1] 3
  1   2   3 
152 136 120 
  1   2   3 
152 136 120 
[1] "RPPA_CHIERARCHICAL"
[1] 3
  1   2   3 
163 115 130 
  1   2   3 
163 115 130 
[1] "MRNASEQ_CNMF"
[1] 3
  1   2   3   4   5   6   7 
153  76 221 143 220  48  16 
  1   2   3   4   5   6   7 
153  76 221 143 220  48  16 
[1] "MRNASEQ_CHIERARCHICAL"
[1] 3
  1   2   3 
218 202 457 
  1   2   3 
218 202 457 
[1] "MIRSEQ_CNMF"
[1] 3
  1   2   3 
218 399 251 
  1   2   3 
218 399 251 
[1] "MIRSEQ_CHIERARCHICAL"
[1] 3
  1   2   3 
369 269 230 
  1   2   3 
369 269 230 
[1] "MIRSEQ_MATURE_CNMF"
[1] 3
  1   2   3 
214 164 168 
  1   2   3 
214 164 168 
[1] "MIRSEQ_MATURE_CHIERARCHICAL"
[1] 3
  1   2   3   4 
106 123 132 185 
  1   2   3   4 
106 123 132 185 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "VITALSTATUS"                           
 [5] "DCCUPLOADDATE"                         
 [6] "PRIMARYSITEOFDESEASE"                  
 [7] "GENDER"                                
 [8] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
 [9] "DAYSTOLASTKNOWNALIVE"                  
[10] "RADIATIONTHERAPY"                      
[11] "HISTOLOGICALTYPE"                      
[12] "RADIATIONS.RADIATION.REGIMENINDICATION"
[13] "DISTANT.METASTASIS"                    
[14] "LYMPH.NODE.METASTASIS"                 
[15] "NUMBER.OF.LYMPH.NODES"                 
[16] "TUMOR.STAGECODE"                       
[17] "NEOPLASM.DISEASESTAGE"                 
[18] "BATCHNUMBER"                           

Input Data has 18 rows and 901 columns.

[1] "Batch" "18"   
[1] "Last Follow UP"
TCGA-A1-A0SB TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SH 
         259          437         1320         1463          433         1437 
TCGA-A1-A0SI TCGA-A1-A0SJ TCGA-A1-A0SK TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SO 
         634          426           NA          242         1196          852 
TCGA-A1-A0SP TCGA-A1-A0SQ TCGA-A2-A04N TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04R 
         583          553         3153           NA         1275         2364 
TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04V TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A04Y 
        1950          670           NA         1918         1349          763 
TCGA-A2-A0CK TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CO TCGA-A2-A0CP TCGA-A2-A0CQ 
        3819         1827           NA         3408         2495         2392 
TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU TCGA-A2-A0CV TCGA-A2-A0CW TCGA-A2-A0CX 
        2298         1917           NA         1870         1750         1303 
TCGA-A2-A0CY TCGA-A2-A0CZ TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0D3 
        1288         1338          643          786          761          736 
TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0EQ TCGA-A2-A0ER 
         496         2757         2515         2181         2053         1902 
TCGA-A2-A0ES TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX 
        1001          807          733          545          770          549 
TCGA-A2-A0EY TCGA-A2-A0ST TCGA-A2-A0SU TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0SX 
         485         1643         1351           NA           NA         1288 
TCGA-A2-A0SY TCGA-A2-A0T0 TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0T3 TCGA-A2-A0T4 
        1154          337          322           NA          456          395 
TCGA-A2-A0T5 TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YE 
         321          344          397          643          550          252 
TCGA-A2-A0YF TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YI TCGA-A2-A0YJ TCGA-A2-A0YK 
         289          404          379          358          326          334 
TCGA-A2-A0YL TCGA-A2-A0YM TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW TCGA-A2-A1FX 
         268          661           NA          460          221          935 
TCGA-A2-A1FZ TCGA-A2-A1G0 TCGA-A2-A1G1 TCGA-A2-A1G4 TCGA-A2-A1G6 TCGA-A2-A259 
         409          380          371          372          132         1285 
TCGA-A2-A25A TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25D TCGA-A2-A25E TCGA-A2-A25F 
        2968          258          285          243         2511          113 
TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A2-A3XV TCGA-A2-A3XX TCGA-A2-A3XZ TCGA-A2-A3Y0 
         363          803          428         1168          972          858 
TCGA-A2-A4RX TCGA-A2-A4S0 TCGA-A2-A4S3 TCGA-A7-A0CD TCGA-A7-A0CE TCGA-A7-A0CG 
         274          271          104          170          253          166 
TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A0DA TCGA-A7-A0DB TCGA-A7-A13D 
         161          188          159          373          140          267 
TCGA-A7-A13E TCGA-A7-A13F TCGA-A7-A13G TCGA-A7-A13H TCGA-A7-A26E TCGA-A7-A26F 
         287          196          208          551          421          257 
TCGA-A7-A26G TCGA-A7-A26H TCGA-A7-A26I TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3IY 
         209           64          122           67          181          151 
TCGA-A7-A3IZ TCGA-A7-A3J0 TCGA-A7-A3J1 TCGA-A7-A3RF TCGA-A7-A4SA TCGA-A7-A4SD 
         148           76           75           54          241          168 
TCGA-A7-A4SF TCGA-A8-A06N TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06R 
         369           NA          396          396           31          546 
TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A075 
        1249           NA           NA          791           31          517 
TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07C TCGA-A8-A07E TCGA-A8-A07F 
        1641          274         1004          580          608          576 
TCGA-A8-A07G TCGA-A8-A07I TCGA-A8-A07J TCGA-A8-A07L TCGA-A8-A07O TCGA-A8-A07P 
         576          426          365          517          304          334 
TCGA-A8-A07R TCGA-A8-A07S TCGA-A8-A07U TCGA-A8-A07W TCGA-A8-A07Z TCGA-A8-A081 
         273          242          303          304          853           NA 
TCGA-A8-A082 TCGA-A8-A083 TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A 
         549           NA          458         1124          396           30 
TCGA-A8-A08B TCGA-A8-A08C TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08H TCGA-A8-A08I 
         702          607          549          606           NA          365 
TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08O TCGA-A8-A08P TCGA-A8-A08R TCGA-A8-A08S 
          NA           NA          942          942           30          580 
TCGA-A8-A08T TCGA-A8-A08X TCGA-A8-A08Z TCGA-A8-A090 TCGA-A8-A091 TCGA-A8-A092 
        2830         1034         1217           NA          580          487 
TCGA-A8-A093 TCGA-A8-A094 TCGA-A8-A095 TCGA-A8-A096 TCGA-A8-A097 TCGA-A8-A099 
         545           NA         1276           NA          365          304 
TCGA-A8-A09A TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09D TCGA-A8-A09E TCGA-A8-A09G 
         304          365           31          396          942           NA 
TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N TCGA-A8-A09Q TCGA-A8-A09R 
        1006          911          457           31          761          273 
TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A09W TCGA-A8-A09X TCGA-A8-A09Z TCGA-A8-A0A1 
         578          457           30           NA           NA          365 
TCGA-A8-A0A2 TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-A8-A0A7 TCGA-A8-A0A9 TCGA-A8-A0AB 
         578          396          640           30          396          517 
TCGA-A8-A0AD TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A23G TCGA-AC-A23H TCGA-AC-A2B8 
        1157           29           72          329           81           44 
TCGA-AC-A2BK TCGA-AC-A2BM TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK 
        1172         1162           44         1685         1125         1180 
TCGA-AC-A2FM TCGA-AC-A2FO TCGA-AC-A2QH TCGA-AC-A2QI TCGA-AC-A2QJ TCGA-AC-A3BB 
          NA         1542           31           28           69           30 
TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AC-A3QP TCGA-AC-A3TN TCGA-AC-A3W6 TCGA-AC-A3YI 
          21           35          286           34           51           46 
TCGA-AC-A3YJ TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A046 TCGA-AN-A049 
          39           10           10            7           10           19 
TCGA-AN-A04A TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AL 
          89           54           52          243          223          197 
TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AS TCGA-AN-A0AT TCGA-AN-A0FD TCGA-AN-A0FF 
           5            9            9           10          195          140 
TCGA-AN-A0FJ TCGA-AN-A0FK TCGA-AN-A0FL TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0FT 
         241          212          230          218          191          183 
TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0FX TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0G0 
          10           11           10           10           10           16 
TCGA-AN-A0XL TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS 
          10           10          375            9           10           10 
TCGA-AN-A0XT TCGA-AN-A0XU TCGA-AN-A0XV TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03M 
          10           10          162          170         2442         1455 
TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A03U 
        1645           NA         2576         1707         1187           NA 
TCGA-AO-A03V TCGA-AO-A0J2 TCGA-AO-A0J3 TCGA-AO-A0J4 TCGA-AO-A0J5 TCGA-AO-A0J6 
         886          585          302          294          735          775 
TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JA TCGA-AO-A0JB TCGA-AO-A0JC 
         260          277         1255          346         1150         1547 
TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JI TCGA-AO-A0JJ 
        1813         1965          354          449         1172         1512 
TCGA-AO-A0JL TCGA-AO-A0JM TCGA-AO-A124 TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A128 
        1319         1826         3119         3018         2850         2877 
TCGA-AO-A129 TCGA-AO-A12A TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12D TCGA-AO-A12E 
        2923         2754         2359         1993         1948         1742 
TCGA-AO-A12F TCGA-AO-A12G TCGA-AO-A12H TCGA-AO-A1KO TCGA-AO-A1KP TCGA-AO-A1KQ 
        1471         1265          862          448         2513         1519 
TCGA-AO-A1KR TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A04J TCGA-AQ-A04L 
        2140           16          541          439          159         3359 
TCGA-AQ-A0Y5 TCGA-AQ-A1H2 TCGA-AQ-A1H3 TCGA-AR-A0TP TCGA-AR-A0TQ TCGA-AR-A0TR 
          NA          230          162         2392         1500           NA 
TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TU TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TX 
        1138         1679          360          904          739           15 
TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U2 TCGA-AR-A0U3 
          NA         1313            8          185           NA         2263 
TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AK TCGA-AR-A1AL 
        1627         2298         1881         1604         1558         1485 
TCGA-AR-A1AN TCGA-AR-A1AO TCGA-AR-A1AP TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AS 
        1329         1324         1215         1309           NA         1242 
TCGA-AR-A1AT TCGA-AR-A1AU TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A1AX TCGA-AR-A1AY 
          NA         1409         1295         1072         1103          614 
TCGA-AR-A24H TCGA-AR-A24K TCGA-AR-A24L TCGA-AR-A24M TCGA-AR-A24N TCGA-AR-A24O 
        3333         1548         2221         1990         2074         1997 
TCGA-AR-A24P TCGA-AR-A24Q TCGA-AR-A24R TCGA-AR-A24S TCGA-AR-A24T TCGA-AR-A24U 
          26         2008         1745         1888         1620         1623 
TCGA-AR-A24V TCGA-AR-A24W TCGA-AR-A24X TCGA-AR-A24Z TCGA-AR-A250 TCGA-AR-A251 
        1648         1550         1465         1574         1707         1373 
TCGA-AR-A252 TCGA-AR-A254 TCGA-AR-A255 TCGA-AR-A256 TCGA-AR-A2LE TCGA-AR-A2LH 
        1236         1212         1058           NA         3913           NA 
TCGA-AR-A2LK TCGA-AR-A2LL TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO TCGA-AR-A2LQ 
        1303          223         1217          519          633          516 
TCGA-AR-A2LR TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I5 TCGA-B6-A0I6 TCGA-B6-A0I8 
         620           NA         3826         4549           NA           NA 
TCGA-B6-A0I9 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IE TCGA-B6-A0IG 
          NA         6718           NA           NA           NA           NA 
TCGA-B6-A0IH TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IO 
          NA         5383           NA         3836           NA         3350 
TCGA-B6-A0IP TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RG TCGA-B6-A0RH TCGA-B6-A0RI 
        3374         3871         6434         2082         5748         6795 
TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0RQ 
          NA           NA         5261         4928           NA           NA 
TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0RV TCGA-B6-A0WS TCGA-B6-A0WT 
          NA         2721         3991         4788           NA         5396 
TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WX TCGA-B6-A0WY TCGA-B6-A0WZ TCGA-B6-A0X0 
          NA          546           NA           NA         3941           NA 
TCGA-B6-A0X1 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A0X7 TCGA-B6-A1KC TCGA-B6-A1KF 
        5671           NA           NA           NA         1326         3088 
TCGA-B6-A1KI TCGA-B6-A1KN TCGA-B6-A2IU TCGA-BH-A0AU TCGA-BH-A0AV TCGA-BH-A0AW 
        1463         3330         4840          746         1180          622 
TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B1 TCGA-BH-A0B3 TCGA-BH-A0B4 
         777          867         1427         1148         1203         1191 
TCGA-BH-A0B5 TCGA-BH-A0B6 TCGA-BH-A0B7 TCGA-BH-A0B8 TCGA-BH-A0B9 TCGA-BH-A0BA 
        1471         1732         1733         1569         1572         1132 
TCGA-BH-A0BC TCGA-BH-A0BD TCGA-BH-A0BF TCGA-BH-A0BG TCGA-BH-A0BJ TCGA-BH-A0BL 
         974          554          781          756          660         1339 
TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BQ TCGA-BH-A0BR TCGA-BH-A0BS 
        1117         1085         1481          826         1632         1640 
TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0BW TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0C1 
        1386         1519          355         1492         1270         1338 
TCGA-BH-A0C3 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DH 
        1464         1305         1393          948          713         1156 
TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DL TCGA-BH-A0DO TCGA-BH-A0DP TCGA-BH-A0DQ 
         673          423         1467          525          476           98 
TCGA-BH-A0DS TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX TCGA-BH-A0DZ TCGA-BH-A0E0 
          77         1170         1374         1442          495          133 
TCGA-BH-A0E1 TCGA-BH-A0E2 TCGA-BH-A0E6 TCGA-BH-A0E7 TCGA-BH-A0E9 TCGA-BH-A0EA 
         477          376          292         1362         1405           NA 
TCGA-BH-A0EB TCGA-BH-A0EE TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0GZ TCGA-BH-A0H0 
         745          943          743          917          328          461 
TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0H9 TCGA-BH-A0HA 
        1149         1080          747          701         1247          856 
TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HK TCGA-BH-A0HL TCGA-BH-A0HN 
         806          727          619          178           72          516 
TCGA-BH-A0HO TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX 
          76          414         1121          392         1560          829 
TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A0W3 TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A0W7 
         867          170          180          175          543          558 
TCGA-BH-A0WA TCGA-BH-A18F TCGA-BH-A18G TCGA-BH-A18H TCGA-BH-A18I TCGA-BH-A18J 
         372          268           61           NA          220           NA 
TCGA-BH-A18K TCGA-BH-A18L TCGA-BH-A18M TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18Q 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A18T TCGA-BH-A18U TCGA-BH-A18V TCGA-BH-A1EN 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EV TCGA-BH-A1EW 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1EX TCGA-BH-A1EY TCGA-BH-A1F0 TCGA-BH-A1F2 TCGA-BH-A1F5 TCGA-BH-A1F6 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1F8 TCGA-BH-A1FB TCGA-BH-A1FC TCGA-BH-A1FD TCGA-BH-A1FE TCGA-BH-A1FG 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1FH TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FN TCGA-BH-A1FR 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1FU TCGA-BH-A201 TCGA-BH-A202 TCGA-BH-A203 TCGA-BH-A204 TCGA-BH-A208 
          NA          209           22           NA           NA           NA 
TCGA-BH-A209 TCGA-BH-A28O TCGA-BH-A28Q TCGA-C8-A12K TCGA-C8-A12L TCGA-C8-A12M 
          NA          323          196           NA           NA           NA 
TCGA-C8-A12N TCGA-C8-A12O TCGA-C8-A12P TCGA-C8-A12Q TCGA-C8-A12T TCGA-C8-A12U 
          NA           NA           NA           NA           NA           NA 
TCGA-C8-A12V TCGA-C8-A12W TCGA-C8-A12X TCGA-C8-A12Y TCGA-C8-A12Z TCGA-C8-A130 
          NA           NA           NA           NA           NA           NA 
TCGA-C8-A131 TCGA-C8-A132 TCGA-C8-A133 TCGA-C8-A134 TCGA-C8-A135 TCGA-C8-A137 
          NA           NA           NA           NA           NA           26 
TCGA-C8-A138 TCGA-C8-A1HE TCGA-C8-A1HF TCGA-C8-A1HG TCGA-C8-A1HI TCGA-C8-A1HJ 
           7           NA           NA           NA            2            5 
TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A1HN TCGA-C8-A1HO TCGA-C8-A26V 
           7            2            6            2           NA            9 
TCGA-C8-A26W TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A274 
           7           11           13            4            6            1 
TCGA-C8-A275 TCGA-C8-A278 TCGA-C8-A27A TCGA-C8-A27B TCGA-C8-A3M7 TCGA-C8-A3M8 
           1            1          371           30            1            7 
TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A142 TCGA-D8-A143 
         264          210           27          113           61          172 
TCGA-D8-A145 TCGA-D8-A146 TCGA-D8-A147 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA 
          49          344            2          256          248           18 
TCGA-D8-A1JB TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JF TCGA-D8-A1JG 
          NA          178          273           57           96          187 
TCGA-D8-A1JH TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1JM 
         284           21          274          109          265          238 
TCGA-D8-A1JN TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1JU TCGA-D8-A1X5 
         217          167          105          123          106          171 
TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XB 
         236           85          272          380          274          201 
TCGA-D8-A1XC TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XG TCGA-D8-A1XJ TCGA-D8-A1XK 
          81          155          197          196          352          326 
TCGA-D8-A1XL TCGA-D8-A1XM TCGA-D8-A1XO TCGA-D8-A1XQ TCGA-D8-A1XR TCGA-D8-A1XS 
         319          218          242          177          168           50 
TCGA-D8-A1XT TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XW TCGA-D8-A1XY TCGA-D8-A1XZ 
         193          149          146          117           81          120 
TCGA-D8-A1Y0 TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A1Y3 TCGA-D8-A27E TCGA-D8-A27F 
         166          115           72          124          182          227 
TCGA-D8-A27G TCGA-D8-A27H TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L TCGA-D8-A27M 
         209          140          185          118          125          144 
TCGA-D8-A27N TCGA-D8-A27P TCGA-D8-A27R TCGA-D8-A27T TCGA-D8-A27V TCGA-D8-A27W 
         145           23           90          135           73           15 
TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A107 TCGA-E2-A108 TCGA-E2-A109 TCGA-E2-A10A 
        1163         1555          763          124         1172          352 
TCGA-E2-A10B TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A14N TCGA-E2-A14O 
         748          853          418          360         1350         1172 
TCGA-E2-A14P TCGA-E2-A14Q TCGA-E2-A14R TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14U 
         487          974          845          834          890          838 
TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A14Z TCGA-E2-A150 
         748          833          692          688          518          591 
TCGA-E2-A152 TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A158 
         588          586          325          553          481          450 
TCGA-E2-A159 TCGA-E2-A15A TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15F 
         515          502          496          315          517          468 
TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L 
         315           42          411          463           34          331 
TCGA-E2-A15M TCGA-E2-A15O TCGA-E2-A15P TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T 
         234          395          315          330          274          267 
TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B1 TCGA-E2-A1B4 TCGA-E2-A1B5 TCGA-E2-A1B6 
        1964         1271         1361          911          774          338 
TCGA-E2-A1BC TCGA-E2-A1BD TCGA-E2-A1IE TCGA-E2-A1IF TCGA-E2-A1IG TCGA-E2-A1IH 
         297          317          983          956          755          658 
TCGA-E2-A1II TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO 
         850          725          518           14          392          448 
TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L7 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA 
         127         1312          633         1015          388          463 
TCGA-E2-A1LB TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK 
         972           NA          350         2875         2750           NA 
TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E2-A2P5 TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E9-A1N3 
        1014          239          326          167          217           NA 
TCGA-E9-A1N4 TCGA-E9-A1N5 TCGA-E9-A1N6 TCGA-E9-A1N8 TCGA-E9-A1N9 TCGA-E9-A1NA 
          NA           NA           NA           NA           NA           NA 
TCGA-E9-A1NC TCGA-E9-A1ND TCGA-E9-A1NE TCGA-E9-A1NF TCGA-E9-A1NG TCGA-E9-A1NH 
          NA           NA           NA           NA           NA           NA 
TCGA-E9-A1NI TCGA-E9-A1QZ TCGA-E9-A1R0 TCGA-E9-A1R2 TCGA-E9-A1R3 TCGA-E9-A1R4 
          NA           NA           NA           19           64           29 
TCGA-E9-A1R5 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RA TCGA-E9-A1RB TCGA-E9-A1RC 
          42           84           34           29           21         1228 
TCGA-E9-A1RD TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A1RH TCGA-E9-A1RI 
          20           47           38           35           14           48 
TCGA-E9-A226 TCGA-E9-A227 TCGA-E9-A228 TCGA-E9-A229 TCGA-E9-A22A TCGA-E9-A22B 
          16           24           NA           NA           NA           NA 
TCGA-E9-A22D TCGA-E9-A22E TCGA-E9-A22G TCGA-E9-A22H TCGA-E9-A243 TCGA-E9-A244 
          NA           NA           NA           NA           43           20 
TCGA-E9-A245 TCGA-E9-A247 TCGA-E9-A248 TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A295 
          25           12           21           28           10           21 
TCGA-E9-A2JS TCGA-E9-A2JT TCGA-E9-A3HO TCGA-E9-A3X8 TCGA-EW-A1IW TCGA-EW-A1IX 
          13           23           19           23          252         1082 
TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1J1 TCGA-EW-A1J2 TCGA-EW-A1J3 TCGA-EW-A1J5 
         258          260          282          139          252          227 
TCGA-EW-A1J6 TCGA-EW-A1OV TCGA-EW-A1OW TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ 
         595          522          463          562          593          941 
TCGA-EW-A1P0 TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1P4 TCGA-EW-A1P5 TCGA-EW-A1P6 
        1121          919          987          501          365          312 
TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PA TCGA-EW-A1PB TCGA-EW-A1PC TCGA-EW-A1PD 
         635           NA          267          608          186          174 
TCGA-EW-A1PE TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A1PH TCGA-EW-A2FR TCGA-EW-A2FS 
         106          139          875          139         1120         1173 
TCGA-EW-A2FV TCGA-EW-A2FW TCGA-EW-A3E8 TCGA-EW-A3U0 TCGA-GI-A2C8 TCGA-GI-A2C9 
         238          190          647          229          212          703 
TCGA-GM-A2D9 TCGA-GM-A2DA TCGA-GM-A2DB TCGA-GM-A2DC TCGA-GM-A2DD TCGA-GM-A2DF 
          NA         5909         1615         1628         1309         1299 
TCGA-GM-A2DH TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DM TCGA-GM-A2DN 
        1286         1883         1896         2762         2331         2352 
TCGA-GM-A2DO TCGA-GM-A3NW TCGA-GM-A3NY TCGA-GM-A3XG TCGA-GM-A3XL TCGA-GM-A3XN 
        1622         2982          743          981         1717         1640 
TCGA-GM-A4E0 TCGA-LL-A440 TCGA-LL-A441 TCGA-LL-A442 TCGA-LL-A50Y TCGA-LQ-A4E4 
        1753           20           91          109          210          484 
TCGA-MS-A51U 
          85 
Variable 1:'AGE':	nDistinctValues=64,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=94,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=550,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=25,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=16,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 10:'RADIATION.THERAPY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'HISTOLOGICAL.TYPE':	nDistinctValues=6,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 13:'DISTANT.METASTASIS':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 14:'LYMPH.NODE.METASTASIS':	nDistinctValues=16,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 15:'NUMBER.OF.LYMPH.NODES':	nDistinctValues=28,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 16:'TUMOR.STAGECODE':	nDistinctValues=12,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 17:'NEOPLASM.DISEASESTAGE':	nDistinctValues=13,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 18:'BATCH.NUMBER':	nDistinctValues=28,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                                   
[2] "GENDER"                                
[3] "HISTOLOGICAL.TYPE"                     
[4] "RADIATIONS.RADIATION.REGIMENINDICATION"
[5] "DISTANT.METASTASIS"                    
[6] "LYMPH.NODE.METASTASIS"                 
[7] "NUMBER.OF.LYMPH.NODES"                 
[8] "TUMOR.STAGECODE"                       
[9] "NEOPLASM.DISEASESTAGE"                 
[1] "TUMOR.?STAGE" "8"           
[1] "stage2"
vv
 T1 T1A T1B T1C  T2 T2B  T3 T3A  T4 T4B T4D  TX 
 38   1  10 188 524   1 100   1   7  26   2   3 
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 901 columns, 1 survival variables, and 9 non-survival variables.
AGE, nv=64, binary=FALSE, numeric=TRUE
GENDER, nv=2, binary=FALSE, numeric=FALSE
HISTOLOGICAL.TYPE, nv=6, binary=FALSE, numeric=FALSE
RADIATIONS.RADIATION.REGIMENINDICATION, nv=2, binary=FALSE, numeric=FALSE
DISTANT.METASTASIS, nv=4, binary=FALSE, numeric=FALSE
LYMPH.NODE.METASTASIS, nv=16, binary=FALSE, numeric=FALSE
NUMBER.OF.LYMPH.NODES, nv=28, binary=FALSE, numeric=TRUE
TUMOR.STAGECODE, nv=0, binary=FALSE, numeric=TRUE
NEOPLASM.DISEASESTAGE, nv=13, binary=FALSE, numeric=FALSE

Clustering(1) Variable = MRNA_CNMF
D1V1, survival
          sevent
clus2       0  1
  subtype1 16  3
  subtype2 35  3
  subtype3 94 17
  subtype4 84 12
  subtype5 97 10
  subtype6 51 14
  subtype7 17  2
  subtype8 35  4
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
      19       38      111       96      107       65       19       39 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
       3        3       17       12       10       14        2        4 
$subtype1
TCGA-A1-A0SD TCGA-A1-A0SH TCGA-A1-A0SM TCGA-A2-A0SV TCGA-A8-A06P TCGA-A8-A07G 
       14.37        47.24         7.96        27.12        13.02        18.94 
TCGA-A8-A07I TCGA-A8-A08Z TCGA-A8-A097 TCGA-AN-A03X TCGA-AN-A0AS TCGA-AN-A0XN 
       14.01        40.01        12.00         0.33         0.30         0.33 
TCGA-AN-A0XW TCGA-BH-A0DZ TCGA-BH-A0H6 TCGA-BH-A18J TCGA-BH-A1EO TCGA-D8-A141 
        5.59        16.27        24.56        20.09        91.99         3.72 
TCGA-E2-A153 
       19.27 

$subtype2
TCGA-A1-A0SE TCGA-A2-A0CP TCGA-A2-A0CV TCGA-A2-A0CZ TCGA-A2-A0EO TCGA-A2-A0ES 
       43.40        82.03        61.48        43.99        71.70        32.91 
TCGA-A2-A0EX TCGA-A2-A0SU TCGA-A2-A0T7 TCGA-A2-A0YL TCGA-A8-A08O TCGA-A8-A09A 
       18.05        44.42        13.05         8.81        30.97         9.99 
TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A0JA TCGA-AO-A0JB 
       13.02        21.04        80.28        47.84        11.38        37.81 
TCGA-AO-A12C TCGA-AO-A12E TCGA-AR-A1AN TCGA-AR-A1AO TCGA-AR-A1AU TCGA-B6-A0IE 
       65.52        57.27        43.69        43.53        46.32        65.69 
TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-B6-A0WY TCGA-BH-A0AZ TCGA-BH-A0B1 TCGA-BH-A0DG 
      140.48       157.41       113.75        28.50        37.74        23.44 
TCGA-BH-A0DI TCGA-BH-A0E9 TCGA-BH-A0EI TCGA-C8-A1HI TCGA-E2-A14Q TCGA-E2-A15E 
       22.13        46.19        24.43         0.07        32.02        17.00 
TCGA-E2-A15H TCGA-E2-A1B1 
        1.38        44.75 

$subtype3
TCGA-A1-A0SJ TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A04Y TCGA-A2-A0CT TCGA-A2-A0CU 
       14.01        77.72        63.12        25.08        63.02         5.16 
TCGA-A2-A0CW TCGA-A2-A0D4 TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0T3 
       57.53        16.31        62.53        26.53        24.10        14.99 
TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A7-A0CD TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A13F 
       12.46        23.77         5.59         6.18         5.23         6.44 
TCGA-A8-A06O TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Z TCGA-A8-A079 TCGA-A8-A07L 
       13.02        29.00        31.00         1.02         9.01        17.00 
TCGA-A8-A07P TCGA-A8-A07W TCGA-A8-A07Z TCGA-A8-A082 TCGA-A8-A085 TCGA-A8-A086 
       10.98         9.99        28.04        18.05        36.95        13.02 
TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A091 TCGA-A8-A09D TCGA-A8-A09E TCGA-A8-A09K 
       18.05        19.92        19.07        13.02        30.97        29.95 
TCGA-A8-A09M TCGA-A8-A09Q TCGA-A8-A09R TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A 
       15.02        25.02         8.98         0.23         0.62         2.93 
TCGA-AN-A0AK TCGA-AN-A0FD TCGA-AN-A0FF TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ 
        7.33         6.41         4.60         0.36         0.33         0.33 
TCGA-AN-A0XT TCGA-AO-A03P TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A03V TCGA-AO-A0J3 
        0.33        84.69        56.12        39.02        29.13         9.93 
TCGA-AO-A0J7 TCGA-AO-A0JI TCGA-AO-A126 TCGA-AO-A12H TCGA-AQ-A04H TCGA-AR-A0TQ 
        8.55        38.53        93.70        28.34        14.43        49.32 
TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-B6-A0IM 
       29.72        24.30        55.86        43.17        83.87       126.12 
TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0RG TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0WT 
       84.59       110.14        68.45        81.17        78.02       177.40 
TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0X5 TCGA-BH-A0AU TCGA-BH-A0B4 TCGA-BH-A0B8 
       79.63        17.95        68.94        24.53        39.16        51.58 
TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0E2 TCGA-BH-A0GZ 
       42.90        45.80        38.01        13.91        12.36        10.78 
TCGA-BH-A0H0 TCGA-BH-A0H3 TCGA-BH-A0H7 TCGA-BH-A0HB TCGA-BH-A0HW TCGA-BH-A0HX 
       15.16        37.78        23.05        26.50        51.29        27.25 
TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18R TCGA-BH-A1ES TCGA-C8-A1HN TCGA-D8-A140 
       26.66        37.74        37.51       113.82         0.07         0.89 
TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A14O TCGA-E2-A14S 
       38.24        51.12        38.53        11.57        38.53        27.42 
TCGA-E2-A14T TCGA-E2-A14W TCGA-E2-A155 TCGA-E2-A15A TCGA-E2-A15F TCGA-E2-A15O 
       29.26        27.39        18.18        16.50        15.39        12.99 
TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T 
       10.85         9.01         8.78 

$subtype4
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T 
       31.79        28.01        19.17        17.98        41.92        64.11 
TCGA-A2-A04U TCGA-A2-A0CM TCGA-A2-A0CY TCGA-A2-A0D0 TCGA-A2-A0D2 TCGA-A2-A0ST 
       22.03        24.79        42.35        21.14        25.02        54.02 
TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM 
       42.35        11.08         7.96         8.28        10.72        21.73 
TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A07C TCGA-A8-A07O 
        8.32        12.26         8.78         9.44        19.07         9.99 
TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08R TCGA-A8-A08X TCGA-AN-A04D TCGA-AN-A0AL 
        8.98         9.96         0.99        33.99         1.71         6.48 
TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FX 
        0.16         0.30         0.33         7.92         7.56         0.33 
TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JL 
        0.53         0.33        59.05         9.67        25.48        43.36 
TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12F TCGA-AQ-A04J TCGA-AR-A0TP 
      102.54        94.59        96.10        48.36         5.23        78.64 
TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0U0 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI 
       37.41        11.84         0.26        53.49        75.55        61.84 
TCGA-AR-A1AJ TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-B6-A0I2 TCGA-B6-A0I6 
       52.73        43.04        17.19        20.19       125.79        32.58 
TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX 
      176.98       127.27       211.53        89.46       131.21        21.47 
TCGA-B6-A0X1 TCGA-BH-A0AV TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0BG TCGA-BH-A0BL 
      186.44        38.79        39.55        51.68        24.85        44.02 
TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0RX TCGA-BH-A0WA 
       11.67        48.23         4.37         9.60         5.59        12.23 
TCGA-BH-A18G TCGA-BH-A18K TCGA-BH-A18Q TCGA-BH-A18V TCGA-BH-A1F0 TCGA-D8-A13Y 
        2.01        90.81        55.63        51.12        25.81         8.68 
TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-E2-A14N TCGA-E2-A14R TCGA-E2-A14X 
        2.01         5.65         0.07        44.38        27.78        22.75 
TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B5 
       22.62        19.43        14.79        16.93        64.57        25.45 

$subtype5
TCGA-A2-A04N TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0D3 TCGA-A2-A0EM TCGA-A2-A0EV 
      103.66        78.64        75.55        24.20        90.64        17.92 
TCGA-A2-A0T5 TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YI TCGA-A7-A0CH 
       10.55        21.14        18.08         9.50        11.77         5.29 
TCGA-A7-A0DB TCGA-A8-A06T TCGA-A8-A06Y TCGA-A8-A07F TCGA-A8-A07S TCGA-A8-A08A 
        4.60        41.06        26.01        18.94         7.96         0.99 
TCGA-A8-A08C TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A099 
       19.96        19.07        93.04        17.92        41.95         9.99 
TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A0A1 TCGA-A8-A0A2 
       12.00         1.02        19.00        15.02        12.00        19.00 
TCGA-A8-A0A9 TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AN-A03Y TCGA-AN-A046 TCGA-AN-A0FK 
       13.02        17.00        38.04         0.33         0.33         6.97 
TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XV TCGA-AO-A0J8 TCGA-AO-A125 
       12.33         0.30         0.33         5.33         9.11        99.22 
TCGA-AO-A12A TCGA-AO-A12B TCGA-AO-A12G TCGA-AR-A0TR TCGA-AR-A1AK TCGA-AR-A1AP 
       90.54        77.56        41.59         5.26        51.22        39.95 
TCGA-AR-A1AS TCGA-AR-A1AW TCGA-B6-A0I5 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC 
       40.83        35.24       149.56       220.87       129.57        50.70 
TCGA-B6-A0IP TCGA-B6-A0RI TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0WZ 
      110.93       223.40       172.96       162.02       102.77       129.57 
TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-BH-A0B5 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BD 
      129.70        28.24        48.36        37.22        32.02        18.21 
TCGA-BH-A0BJ TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0DO 
       21.70        27.16        53.92        45.57        49.94        17.26 
TCGA-BH-A0DP TCGA-BH-A0DT TCGA-BH-A0E1 TCGA-BH-A0E7 TCGA-BH-A0EA TCGA-BH-A0EB 
       15.65        38.47        15.68        44.78        32.65        24.49 
TCGA-BH-A0HA TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HO TCGA-BH-A0HP TCGA-BH-A0HQ 
       28.14        23.90        20.35         2.50        13.61        36.85 
TCGA-BH-A0W3 TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A18I TCGA-BH-A18M TCGA-BH-A18S 
        5.92         5.75        17.85         7.23        72.56        66.05 
TCGA-BH-A1ET TCGA-D8-A146 TCGA-E2-A10B TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A154 
       82.85        11.31        24.59        13.74        11.84        10.68 
TCGA-E2-A156 TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15G TCGA-E2-A15I TCGA-E2-A15J 
       15.81        16.31        10.36        10.36        13.51        15.22 
TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15P TCGA-E2-A1B4 TCGA-E2-A1BD 
        1.12        10.88        10.36        29.95        10.42 

$subtype6
TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A0CX TCGA-A2-A0D1 TCGA-A2-A0EY TCGA-A2-A0SW 
       63.06        44.35        42.84        25.84        15.95        44.84 
TCGA-A2-A0T1 TCGA-A2-A0YG TCGA-A8-A06Q TCGA-A8-A06R TCGA-A8-A075 TCGA-A8-A076 
       10.59        13.28         1.02        17.95        17.00        53.95 
TCGA-A8-A07B TCGA-A8-A084 TCGA-A8-A08B TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A092 
       33.01        15.06        23.08        37.05         9.99        16.01 
TCGA-A8-A09I TCGA-A8-A09N TCGA-A8-A09W TCGA-A8-A09X TCGA-AN-A04C TCGA-AN-A0FT 
       33.07         1.02         0.99        14.01         1.78         6.02 
TCGA-AN-A0FV TCGA-AO-A03N TCGA-AO-A0J2 TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JM 
        0.33        54.08        19.23        59.61        64.60        60.03 
TCGA-AO-A12D TCGA-AQ-A04L TCGA-AR-A0TX TCGA-AR-A0U3 TCGA-AR-A1AT TCGA-B6-A0I8 
       64.04       110.43         0.49        74.40        41.82        24.62 
TCGA-B6-A0I9 TCGA-B6-A0IG TCGA-B6-A0IK TCGA-B6-A0RH TCGA-B6-A0RS TCGA-BH-A0AW 
       12.13       146.50        18.77       188.98       100.67        20.45 
TCGA-BH-A0B7 TCGA-BH-A0BR TCGA-BH-A0C1 TCGA-BH-A0DS TCGA-BH-A0EE TCGA-BH-A0GY 
       56.98        53.65        43.99         2.53        31.00        30.15 
TCGA-BH-A0H9 TCGA-BH-A0HU TCGA-BH-A0HY TCGA-BH-A18P TCGA-BH-A18T TCGA-BH-A18U 
       41.00        12.89        28.50        30.28         7.36        51.39 
TCGA-BH-A1EV TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HL TCGA-D8-A13Z TCGA-E2-A107 
       12.00         0.85         0.23         0.07         6.90        25.08 
TCGA-E2-A10C TCGA-E2-A14P TCGA-E2-A14V TCGA-E2-A152 TCGA-E2-A1B0 
       28.04        16.01        24.59        19.33        41.79 

$subtype7
TCGA-A2-A0CL TCGA-A2-A0EQ TCGA-A8-A08I TCGA-A8-A08P TCGA-A8-A0A7 TCGA-AN-A0AJ 
       60.07        67.50        12.00        30.97         0.99         7.99 
TCGA-AO-A03O TCGA-AO-A0JC TCGA-AR-A0TT TCGA-AR-A1AV TCGA-AR-A1AX TCGA-B6-A0WS 
       81.63        50.86        55.20        42.58        36.26        97.48 
TCGA-BH-A0BF TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0H5 TCGA-BH-A0W7 TCGA-C8-A1HM 
       25.68        49.05        41.75        35.51        18.35         0.20 
TCGA-E2-A14Z 
       17.03 

$subtype8
TCGA-A2-A0EN TCGA-A2-A0EW TCGA-A2-A0SY TCGA-A2-A0T4 TCGA-A2-A0T6 TCGA-A2-A0YK 
       82.68        25.32        37.94        12.99        11.31        10.98 
TCGA-A7-A0CG TCGA-A8-A07E TCGA-A8-A07J TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0XL 
        5.46        19.99        12.00         7.17         6.28         0.33 
TCGA-AN-A0XS TCGA-AO-A0J5 TCGA-AO-A0J9 TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JJ 
        0.33        24.16        41.26        11.64        14.76        49.71 
TCGA-AR-A1AL TCGA-B6-A0IH TCGA-B6-A0X7 TCGA-BH-A0AY TCGA-BH-A0B0 TCGA-BH-A0BM 
       48.82       112.37        58.88        25.55        46.92        36.72 
TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DQ TCGA-BH-A0DX 
       35.67        48.69        48.13        31.17         3.22        47.41 
TCGA-BH-A0HK TCGA-BH-A18F TCGA-BH-A1EU TCGA-BH-A1EW TCGA-D8-A145 TCGA-E2-A108 
        5.85         8.81        42.28        55.69         1.61         4.08 
TCGA-E2-A15M TCGA-E2-A1B6 TCGA-E2-A1BC 
        7.69        11.11         9.76 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
    0.30     0.07     0.07     0.07     0.30     0.07     0.20     0.33 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
   91.99   157.41   177.40   211.53   223.40   188.98    97.48   112.37 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
  14.370   40.605   24.530   22.325   19.070   24.620   36.260   19.990 
[1] "0.3 - 92.0 (14.4)"  "0.1 - 157.4 (40.6)" "0.1 - 177.4 (24.5)"
[4] "0.1 - 211.5 (22.3)" "0.3 - 223.4 (19.1)" "0.1 - 189.0 (24.6)"
[7] "0.2 - 97.5 (36.3)"  "0.3 - 112.4 (20.0)"
  [1] "subtype1" "subtype2" "subtype1" "subtype3" "subtype4" "subtype1"
  [7] "subtype4" "subtype4" "subtype5" "subtype4" "subtype4" "subtype3"
 [13] "subtype4" "subtype4" "subtype3" "subtype6" "subtype6" "subtype3"
 [19] "subtype7" "subtype4" "subtype2" "subtype5" "subtype5" "subtype3"
 [25] "subtype3" "subtype2" "subtype3" "subtype6" "subtype4" "subtype2"
 [31] "subtype4" "subtype6" "subtype4" "subtype5" "subtype3" "subtype5"
 [37] "subtype8" "subtype2" "subtype7" "subtype3" "subtype2" "subtype3"
 [43] "subtype3" "subtype5" "subtype8" "subtype2" "subtype6" "subtype4"
 [49] "subtype2" "subtype1" "subtype6" "subtype4" "subtype8" "subtype4"
 [55] "subtype6" "subtype4" "subtype3" "subtype8" "subtype5" "subtype8"
 [61] "subtype2" "subtype5" "subtype5" "subtype4" "subtype5" "subtype6"
 [67] "subtype3" "subtype5" "subtype4" "subtype8" "subtype2" "subtype4"
 [73] "subtype3" "subtype3" "subtype4" "subtype8" "subtype5" "subtype3"
 [79] "subtype3" "subtype4" "subtype5" "subtype4" "subtype4" "subtype3"
 [85] "subtype3" "subtype1" "subtype6" "subtype6" "subtype5" "subtype3"
 [91] "subtype3" "subtype5" "subtype3" "subtype6" "subtype6" "subtype3"
 [97] "subtype6" "subtype4" "subtype8" "subtype5" "subtype1" "subtype1"
[103] "subtype8" "subtype3" "subtype4" "subtype3" "subtype4" "subtype5"
[109] "subtype4" "subtype3" "subtype3" "subtype3" "subtype6" "subtype3"
[115] "subtype3" "subtype5" "subtype6" "subtype5" "subtype3" "subtype3"
[121] "subtype7" "subtype6" "subtype6" "subtype2" "subtype7" "subtype4"
[127] "subtype5" "subtype5" "subtype4" "subtype1" "subtype3" "subtype6"
[133] "subtype5" "subtype5" "subtype1" "subtype5" "subtype2" "subtype5"
[139] "subtype5" "subtype3" "subtype3" "subtype6" "subtype3" "subtype3"
[145] "subtype6" "subtype3" "subtype3" "subtype5" "subtype5" "subtype6"
[151] "subtype6" "subtype5" "subtype5" "subtype2" "subtype2" "subtype7"
[157] "subtype5" "subtype5" "subtype5" "subtype1" "subtype5" "subtype3"
[163] "subtype5" "subtype3" "subtype3" "subtype6" "subtype4" "subtype7"
[169] "subtype3" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
[175] "subtype3" "subtype3" "subtype4" "subtype5" "subtype4" "subtype8"
[181] "subtype8" "subtype6" "subtype6" "subtype3" "subtype4" "subtype3"
[187] "subtype3" "subtype4" "subtype8" "subtype1" "subtype5" "subtype5"
[193] "subtype5" "subtype8" "subtype3" "subtype4" "subtype5" "subtype1"
[199] "subtype2" "subtype2" "subtype6" "subtype7" "subtype3" "subtype3"
[205] "subtype3" "subtype4" "subtype3" "subtype6" "subtype3" "subtype4"
[211] "subtype8" "subtype4" "subtype3" "subtype5" "subtype8" "subtype2"
[217] "subtype2" "subtype7" "subtype6" "subtype6" "subtype8" "subtype8"
[223] "subtype3" "subtype8" "subtype4" "subtype6" "subtype4" "subtype5"
[229] "subtype3" "subtype4" "subtype4" "subtype5" "subtype5" "subtype2"
[235] "subtype6" "subtype2" "subtype4" "subtype5" "subtype3" "subtype3"
[241] "subtype4" "subtype6" "subtype4" "subtype3" "subtype5" "subtype4"
[247] "subtype7" "subtype4" "subtype3" "subtype3" "subtype6" "subtype3"
[253] "subtype3" "subtype4" "subtype3" "subtype6" "subtype4" "subtype4"
[259] "subtype4" "subtype4" "subtype5" "subtype8" "subtype2" "subtype2"
[265] "subtype5" "subtype4" "subtype4" "subtype5" "subtype6" "subtype2"
[271] "subtype7" "subtype5" "subtype7" "subtype4" "subtype4" "subtype5"
[277] "subtype4" "subtype6" "subtype6" "subtype5" "subtype5" "subtype5"
[283] "subtype2" "subtype6" "subtype8" "subtype4" "subtype6" "subtype3"
[289] "subtype3" "subtype3" "subtype5" "subtype4" "subtype4" "subtype3"
[295] "subtype6" "subtype5" "subtype3" "subtype3" "subtype5" "subtype5"
[301] "subtype5" "subtype2" "subtype6" "subtype4" "subtype4" "subtype2"
[307] "subtype7" "subtype3" "subtype3" "subtype3" "subtype4" "subtype2"
[313] "subtype5" "subtype5" "subtype4" "subtype5" "subtype3" "subtype8"
[319] "subtype3" "subtype4" "subtype6" "subtype8" "subtype2" "subtype8"
[325] "subtype2" "subtype4" "subtype3" "subtype5" "subtype6" "subtype3"
[331] "subtype4" "subtype5" "subtype5" "subtype5" "subtype7" "subtype4"
[337] "subtype5" "subtype4" "subtype8" "subtype8" "subtype8" "subtype5"
[343] "subtype6" "subtype5" "subtype5" "subtype5" "subtype4" "subtype7"
[349] "subtype7" "subtype6" "subtype8" "subtype3" "subtype3" "subtype8"
[355] "subtype2" "subtype3" "subtype2" "subtype3" "subtype4" "subtype5"
[361] "subtype5" "subtype8" "subtype6" "subtype5" "subtype8" "subtype1"
[367] "subtype4" "subtype5" "subtype3" "subtype4" "subtype5" "subtype2"
[373] "subtype5" "subtype5" "subtype6" "subtype2" "subtype6" "subtype3"
[379] "subtype3" "subtype3" "subtype7" "subtype1" "subtype3" "subtype6"
[385] "subtype5" "subtype3" "subtype5" "subtype5" "subtype8" "subtype5"
[391] "subtype5" "subtype5" "subtype6" "subtype3" "subtype3" "subtype6"
[397] "subtype4" "subtype5" "subtype5" "subtype5" "subtype7" "subtype4"
[403] "subtype8" "subtype4" "subtype5" "subtype1" "subtype4" "subtype3"
[409] "subtype5" "subtype3" "subtype6" "subtype4" "subtype3" "subtype5"
[415] "subtype6" "subtype6" "subtype4" "subtype1" "subtype3" "subtype5"
[421] "subtype8" "subtype6" "subtype8" "subtype4" "subtype6" "subtype6"
[427] "subtype2" "subtype6" "subtype7" "subtype3" "subtype4" "subtype6"
[433] "subtype3" "subtype1" "subtype4" "subtype4" "subtype8" "subtype5"
[439] "subtype4" "subtype3" "subtype3" "subtype6" "subtype8" "subtype3"
[445] "subtype3" "subtype5" "subtype6" "subtype5" "subtype5" "subtype4"
[451] "subtype3" "subtype6" "subtype2" "subtype4" "subtype3" "subtype3"
[457] "subtype6" "subtype3" "subtype4" "subtype4" "subtype7" "subtype4"
[463] "subtype6" "subtype1" "subtype5" "subtype3" "subtype5" "subtype4"
[469] "subtype4" "subtype3" "subtype5" "subtype5" "subtype2" "subtype3"
[475] "subtype5" "subtype2" "subtype5" "subtype5" "subtype5" "subtype5"
[481] "subtype8" "subtype3" "subtype5" "subtype3" "subtype3" "subtype3"
[487] "subtype4" "subtype6" "subtype2" "subtype5" "subtype4" "subtype8"
[493] "subtype8" "subtype5"
  [1] "subtype1" "subtype2" "subtype1" "subtype3" "subtype4" "subtype1"
  [7] "subtype4" "subtype4" "subtype5" "subtype4" "subtype4" "subtype3"
 [13] "subtype4" "subtype4" "subtype3" "subtype6" "subtype6" "subtype3"
 [19] "subtype7" "subtype4" "subtype2" "subtype5" "subtype5" "subtype3"
 [25] "subtype3" "subtype2" "subtype3" "subtype6" "subtype4" "subtype2"
 [31] "subtype4" "subtype6" "subtype4" "subtype5" "subtype3" "subtype5"
 [37] "subtype8" "subtype2" "subtype7" "subtype3" "subtype2" "subtype3"
 [43] "subtype3" "subtype5" "subtype8" "subtype2" "subtype6" "subtype4"
 [49] "subtype2" "subtype1" "subtype6" "subtype4" "subtype8" "subtype4"
 [55] "subtype6" "subtype4" "subtype3" "subtype8" "subtype5" "subtype8"
 [61] "subtype2" "subtype5" "subtype5" "subtype4" "subtype5" "subtype6"
 [67] "subtype3" "subtype5" "subtype4" "subtype8" "subtype2" "subtype4"
 [73] "subtype3" "subtype3" "subtype4" "subtype8" "subtype5" "subtype3"
 [79] "subtype3" "subtype4" "subtype5" "subtype4" "subtype4" "subtype3"
 [85] "subtype3" "subtype1" "subtype6" "subtype6" "subtype5" "subtype3"
 [91] "subtype3" "subtype5" "subtype3" "subtype6" "subtype6" "subtype3"
 [97] "subtype6" "subtype4" "subtype8" "subtype5" "subtype1" "subtype1"
[103] "subtype8" "subtype3" "subtype4" "subtype3" "subtype4" "subtype5"
[109] "subtype4" "subtype3" "subtype3" "subtype3" "subtype6" "subtype3"
[115] "subtype3" "subtype5" "subtype6" "subtype5" "subtype3" "subtype3"
[121] "subtype7" "subtype6" "subtype6" "subtype2" "subtype7" "subtype4"
[127] "subtype5" "subtype5" "subtype4" "subtype1" "subtype3" "subtype6"
[133] "subtype5" "subtype5" "subtype1" "subtype5" "subtype2" "subtype5"
[139] "subtype5" "subtype3" "subtype3" "subtype6" "subtype3" "subtype3"
[145] "subtype6" "subtype3" "subtype3" "subtype5" "subtype5" "subtype6"
[151] "subtype6" "subtype5" "subtype5" "subtype2" "subtype2" "subtype7"
[157] "subtype5" "subtype5" "subtype5" "subtype1" "subtype5" "subtype3"
[163] "subtype5" "subtype3" "subtype3" "subtype6" "subtype4" "subtype7"
[169] "subtype3" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
[175] "subtype3" "subtype3" "subtype4" "subtype5" "subtype4" "subtype8"
[181] "subtype8" "subtype6" "subtype6" "subtype3" "subtype4" "subtype3"
[187] "subtype3" "subtype4" "subtype8" "subtype1" "subtype5" "subtype5"
[193] "subtype5" "subtype8" "subtype3" "subtype4" "subtype5" "subtype1"
[199] "subtype2" "subtype2" "subtype6" "subtype7" "subtype3" "subtype3"
[205] "subtype3" "subtype4" "subtype3" "subtype6" "subtype3" "subtype4"
[211] "subtype8" "subtype4" "subtype3" "subtype5" "subtype8" "subtype2"
[217] "subtype2" "subtype7" "subtype6" "subtype6" "subtype8" "subtype8"
[223] "subtype3" "subtype8" "subtype4" "subtype6" "subtype4" "subtype5"
[229] "subtype3" "subtype4" "subtype4" "subtype5" "subtype5" "subtype2"
[235] "subtype6" "subtype2" "subtype4" "subtype5" "subtype3" "subtype3"
[241] "subtype4" "subtype6" "subtype4" "subtype3" "subtype5" "subtype4"
[247] "subtype7" "subtype4" "subtype3" "subtype3" "subtype6" "subtype3"
[253] "subtype3" "subtype4" "subtype3" "subtype6" "subtype4" "subtype4"
[259] "subtype4" "subtype4" "subtype5" "subtype8" "subtype2" "subtype2"
[265] "subtype5" "subtype4" "subtype4" "subtype5" "subtype6" "subtype2"
[271] "subtype7" "subtype5" "subtype7" "subtype4" "subtype4" "subtype5"
[277] "subtype4" "subtype6" "subtype6" "subtype5" "subtype5" "subtype5"
[283] "subtype2" "subtype6" "subtype8" "subtype4" "subtype6" "subtype3"
[289] "subtype3" "subtype3" "subtype5" "subtype4" "subtype4" "subtype3"
[295] "subtype6" "subtype5" "subtype3" "subtype3" "subtype5" "subtype5"
[301] "subtype5" "subtype2" "subtype6" "subtype4" "subtype4" "subtype2"
[307] "subtype7" "subtype3" "subtype3" "subtype3" "subtype4" "subtype2"
[313] "subtype5" "subtype5" "subtype4" "subtype5" "subtype3" "subtype8"
[319] "subtype3" "subtype4" "subtype6" "subtype8" "subtype2" "subtype8"
[325] "subtype2" "subtype4" "subtype3" "subtype5" "subtype6" "subtype3"
[331] "subtype4" "subtype5" "subtype5" "subtype5" "subtype7" "subtype4"
[337] "subtype5" "subtype4" "subtype8" "subtype8" "subtype8" "subtype5"
[343] "subtype6" "subtype5" "subtype5" "subtype5" "subtype4" "subtype7"
[349] "subtype7" "subtype6" "subtype8" "subtype3" "subtype3" "subtype8"
[355] "subtype2" "subtype3" "subtype2" "subtype3" "subtype4" "subtype5"
[361] "subtype5" "subtype8" "subtype6" "subtype5" "subtype8" "subtype1"
[367] "subtype4" "subtype5" "subtype3" "subtype4" "subtype5" "subtype2"
[373] "subtype5" "subtype5" "subtype6" "subtype2" "subtype6" "subtype3"
[379] "subtype3" "subtype3" "subtype7" "subtype1" "subtype3" "subtype6"
[385] "subtype5" "subtype3" "subtype5" "subtype5" "subtype8" "subtype5"
[391] "subtype5" "subtype5" "subtype6" "subtype3" "subtype3" "subtype6"
[397] "subtype4" "subtype5" "subtype5" "subtype5" "subtype7" "subtype4"
[403] "subtype8" "subtype4" "subtype5" "subtype1" "subtype4" "subtype3"
[409] "subtype5" "subtype3" "subtype6" "subtype4" "subtype3" "subtype5"
[415] "subtype6" "subtype6" "subtype4" "subtype1" "subtype3" "subtype5"
[421] "subtype8" "subtype6" "subtype8" "subtype4" "subtype6" "subtype6"
[427] "subtype2" "subtype6" "subtype7" "subtype3" "subtype4" "subtype6"
[433] "subtype3" "subtype1" "subtype4" "subtype4" "subtype8" "subtype5"
[439] "subtype4" "subtype3" "subtype3" "subtype6" "subtype8" "subtype3"
[445] "subtype3" "subtype5" "subtype6" "subtype5" "subtype5" "subtype4"
[451] "subtype3" "subtype6" "subtype2" "subtype4" "subtype3" "subtype3"
[457] "subtype6" "subtype3" "subtype4" "subtype4" "subtype7" "subtype4"
[463] "subtype6" "subtype1" "subtype5" "subtype3" "subtype5" "subtype4"
[469] "subtype4" "subtype3" "subtype5" "subtype5" "subtype2" "subtype3"
[475] "subtype5" "subtype2" "subtype5" "subtype5" "subtype5" "subtype5"
[481] "subtype8" "subtype3" "subtype5" "subtype3" "subtype3" "subtype3"
[487] "subtype4" "subtype6" "subtype2" "subtype5" "subtype4" "subtype8"
[493] "subtype8" "subtype5"
  [1] "subtype1" "subtype2" "subtype1" "subtype3" "subtype4" "subtype1"
  [7] "subtype4" "subtype4" "subtype5" "subtype4" "subtype4" "subtype3"
 [13] "subtype4" "subtype4" "subtype3" "subtype6" "subtype6" "subtype3"
 [19] "subtype7" "subtype4" "subtype2" "subtype5" "subtype5" "subtype3"
 [25] "subtype3" "subtype2" "subtype3" "subtype6" "subtype4" "subtype2"
 [31] "subtype4" "subtype6" "subtype4" "subtype5" "subtype3" "subtype5"
 [37] "subtype8" "subtype2" "subtype7" "subtype3" "subtype2" "subtype3"
 [43] "subtype3" "subtype5" "subtype8" "subtype2" "subtype6" "subtype4"
 [49] "subtype2" "subtype1" "subtype6" "subtype4" "subtype8" "subtype4"
 [55] "subtype6" "subtype4" "subtype3" "subtype8" "subtype5" "subtype8"
 [61] "subtype2" "subtype5" "subtype5" "subtype4" "subtype5" "subtype6"
 [67] "subtype3" "subtype5" "subtype4" "subtype8" "subtype2" "subtype4"
 [73] "subtype3" "subtype3" "subtype4" "subtype8" "subtype5" "subtype3"
 [79] "subtype3" "subtype4" "subtype5" "subtype4" "subtype4" "subtype3"
 [85] "subtype3" "subtype1" "subtype6" "subtype6" "subtype5" "subtype3"
 [91] "subtype3" "subtype5" "subtype3" "subtype6" "subtype6" "subtype3"
 [97] "subtype6" "subtype4" "subtype8" "subtype5" "subtype1" "subtype1"
[103] "subtype8" "subtype3" "subtype4" "subtype3" "subtype4" "subtype5"
[109] "subtype4" "subtype3" "subtype3" "subtype3" "subtype6" "subtype3"
[115] "subtype3" "subtype5" "subtype6" "subtype5" "subtype3" "subtype3"
[121] "subtype7" "subtype6" "subtype6" "subtype2" "subtype7" "subtype4"
[127] "subtype5" "subtype5" "subtype4" "subtype1" "subtype3" "subtype6"
[133] "subtype5" "subtype5" "subtype1" "subtype5" "subtype2" "subtype5"
[139] "subtype5" "subtype3" "subtype3" "subtype6" "subtype3" "subtype3"
[145] "subtype6" "subtype3" "subtype3" "subtype5" "subtype5" "subtype6"
[151] "subtype6" "subtype5" "subtype5" "subtype2" "subtype2" "subtype7"
[157] "subtype5" "subtype5" "subtype5" "subtype1" "subtype5" "subtype3"
[163] "subtype5" "subtype3" "subtype3" "subtype6" "subtype4" "subtype7"
[169] "subtype3" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
[175] "subtype3" "subtype3" "subtype4" "subtype5" "subtype4" "subtype8"
[181] "subtype8" "subtype6" "subtype6" "subtype3" "subtype4" "subtype3"
[187] "subtype3" "subtype4" "subtype8" "subtype1" "subtype5" "subtype5"
[193] "subtype5" "subtype8" "subtype3" "subtype4" "subtype5" "subtype1"
[199] "subtype2" "subtype2" "subtype6" "subtype7" "subtype3" "subtype3"
[205] "subtype3" "subtype4" "subtype3" "subtype6" "subtype3" "subtype4"
[211] "subtype8" "subtype4" "subtype3" "subtype5" "subtype8" "subtype2"
[217] "subtype2" "subtype7" "subtype6" "subtype6" "subtype8" "subtype8"
[223] "subtype3" "subtype8" "subtype4" "subtype6" "subtype4" "subtype5"
[229] "subtype3" "subtype4" "subtype4" "subtype5" "subtype5" "subtype2"
[235] "subtype6" "subtype2" "subtype4" "subtype5" "subtype3" "subtype3"
[241] "subtype4" "subtype6" "subtype4" "subtype3" "subtype5" "subtype4"
[247] "subtype7" "subtype4" "subtype3" "subtype3" "subtype6" "subtype3"
[253] "subtype3" "subtype4" "subtype3" "subtype6" "subtype4" "subtype4"
[259] "subtype4" "subtype4" "subtype5" "subtype8" "subtype2" "subtype2"
[265] "subtype5" "subtype4" "subtype4" "subtype5" "subtype6" "subtype2"
[271] "subtype7" "subtype5" "subtype7" "subtype4" "subtype4" "subtype5"
[277] "subtype4" "subtype6" "subtype6" "subtype5" "subtype5" "subtype5"
[283] "subtype2" "subtype6" "subtype8" "subtype4" "subtype6" "subtype3"
[289] "subtype3" "subtype3" "subtype5" "subtype4" "subtype4" "subtype3"
[295] "subtype6" "subtype5" "subtype3" "subtype3" "subtype5" "subtype5"
[301] "subtype5" "subtype2" "subtype6" "subtype4" "subtype4" "subtype2"
[307] "subtype7" "subtype3" "subtype3" "subtype3" "subtype4" "subtype2"
[313] "subtype5" "subtype5" "subtype4" "subtype5" "subtype3" "subtype8"
[319] "subtype3" "subtype4" "subtype6" "subtype8" "subtype2" "subtype8"
[325] "subtype2" "subtype4" "subtype3" "subtype5" "subtype6" "subtype3"
[331] "subtype4" "subtype5" "subtype5" "subtype5" "subtype7" "subtype4"
[337] "subtype5" "subtype4" "subtype8" "subtype8" "subtype8" "subtype5"
[343] "subtype6" "subtype5" "subtype5" "subtype5" "subtype4" "subtype7"
[349] "subtype7" "subtype6" "subtype8" "subtype3" "subtype3" "subtype8"
[355] "subtype2" "subtype3" "subtype2" "subtype3" "subtype4" "subtype5"
[361] "subtype5" "subtype8" "subtype6" "subtype5" "subtype8" "subtype1"
[367] "subtype4" "subtype5" "subtype3" "subtype4" "subtype5" "subtype2"
[373] "subtype5" "subtype5" "subtype6" "subtype2" "subtype6" "subtype3"
[379] "subtype3" "subtype3" "subtype7" "subtype1" "subtype3" "subtype6"
[385] "subtype5" "subtype3" "subtype5" "subtype5" "subtype8" "subtype5"
[391] "subtype5" "subtype5" "subtype6" "subtype3" "subtype3" "subtype6"
[397] "subtype4" "subtype5" "subtype5" "subtype5" "subtype7" "subtype4"
[403] "subtype8" "subtype4" "subtype5" "subtype1" "subtype4" "subtype3"
[409] "subtype5" "subtype3" "subtype6" "subtype4" "subtype3" "subtype5"
[415] "subtype6" "subtype6" "subtype4" "subtype1" "subtype3" "subtype5"
[421] "subtype8" "subtype6" "subtype8" "subtype4" "subtype6" "subtype6"
[427] "subtype2" "subtype6" "subtype7" "subtype3" "subtype4" "subtype6"
[433] "subtype3" "subtype1" "subtype4" "subtype4" "subtype8" "subtype5"
[439] "subtype4" "subtype3" "subtype3" "subtype6" "subtype8" "subtype3"
[445] "subtype3" "subtype5" "subtype6" "subtype5" "subtype5" "subtype4"
[451] "subtype3" "subtype6" "subtype2" "subtype4" "subtype3" "subtype3"
[457] "subtype6" "subtype3" "subtype4" "subtype4" "subtype7" "subtype4"
[463] "subtype6" "subtype1" "subtype5" "subtype3" "subtype5" "subtype4"
[469] "subtype4" "subtype3" "subtype5" "subtype5" "subtype2" "subtype3"
[475] "subtype5" "subtype2" "subtype5" "subtype5" "subtype5" "subtype5"
[481] "subtype8" "subtype3" "subtype5" "subtype3" "subtype3" "subtype3"
[487] "subtype4" "subtype6" "subtype2" "subtype5" "subtype4" "subtype8"
[493] "subtype8" "subtype5"
D1V2, continuous
D1V3, binary
          cls
clus         0   1
  subtype1  20   1
  subtype2  39   0
  subtype3 117   4
  subtype4 101   0
  subtype5 110   0
  subtype6  74   0
  subtype7  19   1
  subtype8  40   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   20    1
  subtype2   39    0
  subtype3  117    4
  subtype4  101    0
  subtype5  110    0
  subtype6   74    0
  subtype7   19    1
  subtype8   40    0
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                            20                              0
  subtype2                            28                              8
  subtype3                           113                              1
  subtype4                            93                              1
  subtype5                            85                             14
  subtype6                            67                              5
  subtype7                            19                              1
  subtype8                            24                             11
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   0                                0
  subtype2                   0                                3
  subtype3                   0                                0
  subtype4                   1                                0
  subtype5                   0                                5
  subtype6                   0                                0
  subtype7                   0                                0
  subtype8                   0                                3
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  0              1
  subtype2                  0              0
  subtype3                  1              6
  subtype4                  0              6
  subtype5                  1              5
  subtype6                  0              2
  subtype7                  0              0
  subtype8                  0              2
D1V4, multiclass
D1V5, binary
          cls
clus        0  1
  subtype1  3 18
  subtype2 11 28
  subtype3 32 89
  subtype4 34 67
  subtype5 31 79
  subtype6 21 53
  subtype7  5 15
  subtype8 11 29
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    3   18
  subtype2   11   28
  subtype3   32   89
  subtype4   34   67
  subtype5   31   79
  subtype6   21   53
  subtype7    5   15
  subtype8   11   29
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0  19   2   0
  subtype2        1  37   1   0
  subtype3        0 116   1   4
  subtype4        0  97   3   1
  subtype5        1 101   3   5
  subtype6        0  70   3   1
  subtype7        0  19   0   1
  subtype8        0  37   1   2
D1V6, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3C NX
  subtype1  3       0       3  3   3   0   0    0  4   3  0   1   0  1
  subtype2  3       4       7  3   9   2   0    2  4   1  1   2   0  1
  subtype3 25       1      23 17  22   5   0    6  7   7  1   3   0  4
  subtype4 35       3      26 12   6   4   1    1  5   3  1   3   1  0
  subtype5 37       7      22  5  18   5   1    2  4   3  2   3   0  1
  subtype6 14       0      10 13  10   2   0    1  6   8  4   4   0  2
  subtype7  6       0       5  1   3   0   0    1  1   2  0   0   0  1
  subtype8 15       1       5  4   6   2   0    0  1   2  1   2   0  1
D1V7, multiclass
D1V8, continuous
D1V9, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1       1        0        0         8         3          5          1
  subtype2       1        3        0        12        10          8          0
  subtype3       6        8        4        36        34         20          6
  subtype4       7       11        0        45        19          9          1
  subtype5      14       14        0        43        15         10          5
  subtype6       4        2        0        21        19         15          2
  subtype7       3        2        0         6         4          4          0
  subtype8       6        1        2        14         6          6          0
          vv
clus       STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1          0        2         0       1
  subtype2          2        1         1       1
  subtype3          3        1         0       3
  subtype4          4        3         0       2
  subtype5          2        3         0       4
  subtype6          6        3         0       2
  subtype7          0        0         0       1
  subtype8          2        1         0       2
D1V10, multiclass

Clustering(2) Variable = MRNA_CHIERARCHICAL
D2V1, survival
          sevent
clus2        0   1
  subtype1 110  12
  subtype2 102  18
  subtype3 217  35
subtype1 subtype2 subtype3 
     122      120      252 
subtype1 subtype2 subtype3 
      12       18       35 
$subtype1
TCGA-A1-A0SE TCGA-A2-A04N TCGA-A2-A0CL TCGA-A2-A0CP TCGA-A2-A0CV TCGA-A2-A0CZ 
       43.40       103.66        60.07        82.03        61.48        43.99 
TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0ES TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX 
       82.68        71.70        32.91        17.92        25.32        18.05 
TCGA-A2-A0SY TCGA-A2-A0T4 TCGA-A2-A0T6 TCGA-A2-A0YD TCGA-A2-A0YI TCGA-A2-A0YK 
       37.94        12.99        11.31        18.08        11.77        10.98 
TCGA-A2-A0YL TCGA-A7-A0CG TCGA-A7-A0DB TCGA-A8-A07E TCGA-A8-A07J TCGA-A8-A08O 
        8.81         5.46         4.60        19.99        12.00        30.97 
TCGA-A8-A08Z TCGA-A8-A09A TCGA-A8-A09D TCGA-A8-A0A1 TCGA-A8-A0A4 TCGA-A8-A0A6 
       40.01         9.99        13.02        12.00        13.02        21.04 
TCGA-AN-A046 TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0FW TCGA-AN-A0XL TCGA-AN-A0XS 
        0.33         7.17         6.28         0.36         0.33         0.33 
TCGA-AN-A0XV TCGA-AO-A03M TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A0J5 TCGA-AO-A0J9 
        5.33        47.84        56.12        39.02        24.16        41.26 
TCGA-AO-A0JA TCGA-AO-A0JB TCGA-AO-A0JC TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JJ 
       11.38        37.81        50.86        11.64        14.76        49.71 
TCGA-AO-A12A TCGA-AO-A12E TCGA-AR-A0TT TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AN 
       90.54        57.27        55.20        51.22        48.82        43.69 
TCGA-AR-A1AP TCGA-AR-A1AU TCGA-AR-A1AV TCGA-AR-A1AX TCGA-B6-A0IE TCGA-B6-A0IH 
       39.95        46.32        42.58        36.26        65.69       112.37 
TCGA-B6-A0IN TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-B6-A0WY TCGA-B6-A0X7 TCGA-BH-A0AY 
       84.59       140.48       157.41       113.75        58.88        25.55 
TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0BC TCGA-BH-A0BD 
       28.50        46.92        39.16        48.36        32.02        18.21 
TCGA-BH-A0BF TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BQ 
       25.68        21.70        36.72        35.67        48.69        27.16 
TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DO 
       48.13        31.17        23.44        22.13        13.91        17.26 
TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0DT TCGA-BH-A0DX TCGA-BH-A0E9 
       15.65         3.22         2.53        38.47        47.41        46.19 
TCGA-BH-A0EA TCGA-BH-A0EI TCGA-BH-A0H5 TCGA-BH-A0HA TCGA-BH-A0HF TCGA-BH-A0HK 
       32.65        24.43        35.51        28.14        23.90         5.85 
TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A0W7 TCGA-BH-A18F 
       13.61        36.85         5.75        17.85        18.35         8.81 
TCGA-BH-A18I TCGA-BH-A18M TCGA-BH-A1EO TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EW 
        7.23        72.56        91.99        82.85        42.28        55.69 
TCGA-D8-A141 TCGA-D8-A145 TCGA-D8-A146 TCGA-E2-A108 TCGA-E2-A10F TCGA-E2-A14Z 
        3.72         1.61        11.31         4.08        11.84        17.03 
TCGA-E2-A15C TCGA-E2-A15E TCGA-E2-A15I TCGA-E2-A15M TCGA-E2-A15P TCGA-E2-A1B1 
       16.31        17.00        13.51         7.69        10.36        44.75 
TCGA-E2-A1B6 TCGA-E2-A1BC 
       11.11         9.76 

$subtype2
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T 
       31.79        28.01        19.17        17.98        41.92        64.11 
TCGA-A2-A04U TCGA-A2-A04X TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0CY TCGA-A2-A0D0 
       22.03        44.35        24.79        42.84        42.35        21.14 
TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0ST TCGA-A2-A0SW TCGA-A2-A0SX 
       25.84        25.02        67.50        54.02        44.84        42.35 
TCGA-A2-A0T0 TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM 
       11.08        10.59         7.96         8.28        10.72        21.73 
TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A07C TCGA-A8-A07O 
        8.32        12.26         8.78         9.44        19.07         9.99 
TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08L TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A09X 
        8.98         9.96         9.99         0.99        33.99        14.01 
TCGA-A8-A0A7 TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AR TCGA-AN-A0AT 
        0.99         1.78         1.71         6.48         0.30         0.33 
TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FX TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U 
        7.92         7.56         0.33         0.53         0.33        59.05 
TCGA-AO-A0J2 TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 
       19.23         9.67        25.48        64.60        43.36       102.54 
TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F TCGA-AQ-A04J TCGA-AR-A0TP 
       94.59        96.10        64.04        48.36         5.23        78.64 
TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0TX TCGA-AR-A0U0 TCGA-AR-A0U4 TCGA-AR-A1AH 
       37.41        11.84         0.49         0.26        53.49        75.55 
TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AT 
       61.84        52.73        43.53        43.04        17.19        41.82 
TCGA-AR-A1AY TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IQ 
       20.19       125.79        32.58       176.98        18.77       127.27 
TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX TCGA-B6-A0X1 
      211.53       100.67        89.46       131.21        21.47       186.44 
TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BG 
       38.79        20.45        39.55        56.98        51.68        24.85 
TCGA-BH-A0BL TCGA-BH-A0BR TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 
       44.02        53.65        11.67        48.23         4.37         9.60 
TCGA-BH-A0EE TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18K TCGA-BH-A18Q 
       31.00         5.59        12.23         2.01        90.81        55.63 
TCGA-BH-A18V TCGA-BH-A1F0 TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 
       51.12        25.81         8.68         6.90         2.01         5.65 
TCGA-D8-A147 TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Y 
        0.07        44.38        16.01        27.78        22.75        22.62 
TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B5 
       19.43        14.79        16.93        64.57        41.79        25.45 

$subtype3
TCGA-A1-A0SD TCGA-A1-A0SH TCGA-A1-A0SJ TCGA-A1-A0SM TCGA-A2-A04R TCGA-A2-A04V 
       14.37        47.24        14.01         7.96        77.72        63.12 
TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU 
       63.06        25.08        78.64        75.55        63.02         5.16 
TCGA-A2-A0CW TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0ER TCGA-A2-A0ET 
       57.53        24.20        16.31        90.64        62.53        26.53 
TCGA-A2-A0EU TCGA-A2-A0EY TCGA-A2-A0SU TCGA-A2-A0SV TCGA-A2-A0T3 TCGA-A2-A0T5 
       24.10        15.95        44.42        27.12        14.99        10.55 
TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YF TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YT 
       13.05        21.14         9.50        13.28        12.46        23.77 
TCGA-A7-A0CD TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A13F TCGA-A8-A06O 
        5.59         5.29         6.18         5.23         6.44        13.02 
TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06R TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06X 
       13.02         1.02        17.95        41.06        29.00        31.00 
TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07B 
       26.01         1.02        17.00        53.95         9.01        33.01 
TCGA-A8-A07F TCGA-A8-A07G TCGA-A8-A07I TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S 
       18.94        18.94        14.01        17.00        10.98         7.96 
TCGA-A8-A07W TCGA-A8-A07Z TCGA-A8-A082 TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 
        9.99        28.04        18.05        15.06        36.95        13.02 
TCGA-A8-A08A TCGA-A8-A08B TCGA-A8-A08C TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08I 
        0.99        23.08        19.96        18.05        19.92        12.00 
TCGA-A8-A08J TCGA-A8-A08P TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A091 TCGA-A8-A092 
       37.05        30.97        19.07        93.04        19.07        16.01 
TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A097 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A09C 
       17.92        41.95        12.00         9.99        12.00         1.02 
TCGA-A8-A09E TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N TCGA-A8-A09Q 
       30.97        33.07        29.95        15.02         1.02        25.02 
TCGA-A8-A09R TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A09W TCGA-A8-A0A2 TCGA-A8-A0A9 
        8.98        19.00        15.02         0.99        19.00        13.02 
TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A049 
       17.00        38.04         0.33         0.33         0.23         0.62 
TCGA-AN-A04A TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0FD 
        2.93         7.99         7.33         0.16         0.30         6.41 
TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AN-A0FY TCGA-AN-A0FZ 
        4.60         6.97         6.02         0.33         0.33         0.33 
TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XT TCGA-AN-A0XW 
        0.33        12.33         0.30         0.33         0.33         5.59 
TCGA-AO-A03L TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A03V TCGA-AO-A0J3 
       80.28        54.08        81.63        84.69        29.13         9.93 
TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0JD TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A125 
        8.55         9.11        59.61        38.53        60.03        99.22 
TCGA-AO-A126 TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12G TCGA-AO-A12H TCGA-AQ-A04H 
       93.70        77.56        65.52        41.59        28.34        14.43 
TCGA-AQ-A04L TCGA-AR-A0TQ TCGA-AR-A0TR TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY 
      110.43        49.32         5.26        29.72        24.30        55.86 
TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A1AS TCGA-AR-A1AW TCGA-B6-A0I5 
       43.17        83.87        74.40        40.83        35.24       149.56 
TCGA-B6-A0I8 TCGA-B6-A0I9 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IG 
       24.62        12.13       220.87       129.57        50.70       146.50 
TCGA-B6-A0IM TCGA-B6-A0IO TCGA-B6-A0IP TCGA-B6-A0RG TCGA-B6-A0RH TCGA-B6-A0RI 
      126.12       110.14       110.93        68.45       188.98       223.40 
TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0WS 
       81.17        78.02       172.96       162.02       102.77        97.48 
TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 
      177.40        79.63        17.95       129.57       129.70        28.24 
TCGA-B6-A0X5 TCGA-BH-A0AU TCGA-BH-A0B1 TCGA-BH-A0B8 TCGA-BH-A0BA TCGA-BH-A0BS 
       68.94        24.53        37.74        51.58        37.22        53.92 
TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0C1 TCGA-BH-A0C7 
       45.57        49.94        49.05        41.75        43.99        42.90 
TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DZ TCGA-BH-A0E1 TCGA-BH-A0E2 TCGA-BH-A0E7 
       45.80        38.01        16.27        15.68        12.36        44.78 
TCGA-BH-A0EB TCGA-BH-A0GY TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H3 TCGA-BH-A0H6 
       24.49        30.15        10.78        15.16        37.78        24.56 
TCGA-BH-A0H7 TCGA-BH-A0H9 TCGA-BH-A0HB TCGA-BH-A0HI TCGA-BH-A0HO TCGA-BH-A0HU 
       23.05        41.00        26.50        20.35         2.50        12.89 
TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A18J TCGA-BH-A18L 
       51.29        27.25        28.50         5.92        20.09        26.66 
TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A18T TCGA-BH-A18U 
       37.74        30.28        37.51        66.05         7.36        51.39 
TCGA-BH-A1ES TCGA-BH-A1EV TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HI TCGA-C8-A1HL 
      113.82        12.00         0.85         0.23         0.07         0.07 
TCGA-C8-A1HM TCGA-C8-A1HN TCGA-D8-A140 TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A107 
        0.20         0.07         0.89        38.24        51.12        25.08 
TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A14O 
       38.53        11.57        24.59        28.04        13.74        38.53 
TCGA-E2-A14Q TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A152 
       32.02        27.42        29.26        24.59        27.39        19.33 
TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15D 
       19.27        10.68        18.18        15.81        16.50        10.36 
TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L 
       15.39        10.36         1.38        15.22         1.12        10.88 
TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1BD 
       12.99        10.85         9.01         8.78        29.95        10.42 

subtype1 subtype2 subtype3 
    0.33     0.07     0.07 
subtype1 subtype2 subtype3 
  157.41   211.53   223.40 
subtype1 subtype2 subtype3 
  25.615   23.770   23.065 
[1] "0.3 - 157.4 (25.6)" "0.1 - 211.5 (23.8)" "0.1 - 223.4 (23.1)"
  [1] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [19] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [25] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [49] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
 [61] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [67] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [73] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [79] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [97] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[103] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[121] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[127] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[151] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[169] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[181] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[187] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[199] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[205] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[211] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[223] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[229] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[241] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[247] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[289] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[295] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[301] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[313] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[331] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[337] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[355] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[367] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[373] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[379] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[385] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[391] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[409] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[415] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[421] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[427] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[433] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[451] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[457] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[463] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[469] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[475] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[481] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[487] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[493] "subtype1" "subtype3"
  [1] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [19] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [25] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [49] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
 [61] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [67] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [73] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [79] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [97] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[103] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[121] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[127] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[151] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[169] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[181] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[187] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[199] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[205] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[211] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[223] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[229] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[241] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[247] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[289] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[295] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[301] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[313] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[331] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[337] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[355] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[367] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[373] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[379] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[385] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[391] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[409] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[415] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[421] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[427] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[433] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[451] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[457] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[463] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[469] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[475] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[481] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[487] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[493] "subtype1" "subtype3"
  [1] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [19] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [25] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [49] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
 [61] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [67] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [73] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [79] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [97] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[103] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[121] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[127] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[151] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[169] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[181] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[187] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[199] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[205] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[211] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[223] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[229] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[241] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[247] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[289] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[295] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[301] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[313] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[331] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[337] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[355] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[367] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[373] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[379] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[385] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[391] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[409] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[415] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[421] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[427] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[433] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[451] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[457] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[463] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[469] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[475] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[481] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[487] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[493] "subtype1" "subtype3"
D2V2, continuous
D2V3, binary
          cls
clus         0   1
  subtype1 122   2
  subtype2 131   0
  subtype3 267   4
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  122    2
  subtype2  131    0
  subtype3  267    4
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      122      131      267
  MALE          2        0        4
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                            88                             26
  subtype2                           120                              4
  subtype3                           241                             11
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   0                                6
  subtype2                   1                                0
  subtype3                   0                                5
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  0              4
  subtype2                  0              6
  subtype3                  2             12
D2V4, multiclass
D2V5, binary
          cls
clus         0   1
  subtype1  36  88
  subtype2  45  86
  subtype3  67 204
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   36   88
  subtype2   45   86
  subtype3   67  204
     clus
vv    subtype1 subtype2 subtype3
  NO        36       45       67
  YES       88       86      204
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        2 116   2   4
  subtype2        0 126   4   1
  subtype3        0 254   8   9
D2V6, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3C NX
  subtype1 31       7      24 11  21   4   0    1  7   7  3   5   0  3
  subtype2 38       3      33 18  10   4   1    1  8   6  3   5   1  0
  subtype3 69       6      44 29  46  12   1   11 17  16  4   8   0  8
D2V7, multiclass
D2V8, continuous
D2V9, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1      17       10        2        38        22         21          1
  subtype2       8       12        0        56        25         13          2
  subtype3      17       19        4        91        63         43         12
          vv
clus       STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1          5        2         1       5
  subtype2          8        4         0       3
  subtype3          6        8         0       8
D2V10, multiclass

Clustering(3) Variable = CN_CNMF
D3V1, survival
          sevent
clus2        0   1
  subtype1 280  30
  subtype2 172  19
  subtype3  58   6
  subtype4 184  29
  subtype5  38  10
subtype1 subtype2 subtype3 subtype4 subtype5 
     310      191       64      213       48 
subtype1 subtype2 subtype3 subtype4 subtype5 
      30       19        6       29       10 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SH TCGA-A2-A04N TCGA-A2-A04Q 
        8.52        48.10        14.24        47.24       103.66        41.92 
TCGA-A2-A04V TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CK TCGA-A2-A0CL TCGA-A2-A0CO 
       63.12        63.06        25.08       125.56        60.07       112.04 
TCGA-A2-A0CP TCGA-A2-A0CQ TCGA-A2-A0D1 TCGA-A2-A0D3 TCGA-A2-A0EM TCGA-A2-A0EN 
       82.03        78.64        25.84        24.20        90.64        82.68 
TCGA-A2-A0EO TCGA-A2-A0ER TCGA-A2-A0ES TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0ST 
       71.70        62.53        32.91        25.32        18.05        54.02 
TCGA-A2-A0SU TCGA-A2-A0SY TCGA-A2-A0T1 TCGA-A2-A0T5 TCGA-A2-A0T6 TCGA-A2-A0YC 
       44.42        37.94        10.59        10.55        11.31        21.14 
TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YH TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL 
       18.08         9.50        12.46        11.77        10.98         8.81 
TCGA-A2-A1FZ TCGA-A2-A1G4 TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25C 
       13.45        12.23         4.34        42.25        97.58         9.37 
TCGA-A2-A25F TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A2-A3XV TCGA-A2-A3XZ TCGA-A2-A4RX 
        3.72        11.93        26.40        14.07        31.96         9.01 
TCGA-A2-A4S0 TCGA-A7-A0CG TCGA-A7-A0CH TCGA-A7-A0D9 TCGA-A7-A13G TCGA-A7-A13H 
        8.91         5.46         5.29         5.23         6.84        18.12 
TCGA-A7-A26E TCGA-A7-A26F TCGA-A7-A26H TCGA-A7-A3IY TCGA-A7-A3J0 TCGA-A7-A3J1 
       13.84         8.45         2.10         4.96         2.50         2.47 
TCGA-A7-A3RF TCGA-A8-A06P TCGA-A8-A07E TCGA-A8-A07J TCGA-A8-A07S TCGA-A8-A08A 
        1.78        13.02        19.99        12.00         7.96         0.99 
TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A095 TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A09X 
       93.04        40.01        41.95        19.00        15.02        14.01 
TCGA-A8-A0A7 TCGA-A8-A0AD TCGA-AC-A23E TCGA-AC-A23G TCGA-AC-A2B8 TCGA-AC-A2FB 
        0.99        38.04         2.37        10.82         1.45         1.45 
TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FO TCGA-AC-A2QI TCGA-AC-A2QJ 
       55.40        36.99        38.79        50.70         0.92         2.27 
TCGA-AC-A3BB TCGA-AC-A3HN TCGA-AC-A3QP TCGA-AC-A3TN TCGA-AC-A3W6 TCGA-AC-A3YI 
        0.99         0.69         9.40         1.12         1.68         1.51 
TCGA-AC-A3YJ TCGA-AN-A046 TCGA-AN-A0FF TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0XR 
        1.28         0.33         4.60         7.17         6.28         0.33 
TCGA-AN-A0XS TCGA-AN-A0XV TCGA-AO-A03U TCGA-AO-A0J5 TCGA-AO-A0J8 TCGA-AO-A0JA 
        0.33         5.33        59.05        24.16         9.11        11.38 
TCGA-AO-A0JC TCGA-AO-A0JF TCGA-AO-A0JJ TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A128 
       50.86        11.64        49.71        99.22        93.70        94.59 
TCGA-AO-A12A TCGA-AO-A12B TCGA-AO-A12H TCGA-AO-A1KO TCGA-AQ-A1H3 TCGA-AR-A0TX 
       90.54        77.56        28.34        14.73         5.33         0.49 
TCGA-AR-A1AJ TCGA-AR-A1AL TCGA-AR-A1AN TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR 
       52.73        48.82        43.69        43.53        43.04        17.19 
TCGA-AR-A1AS TCGA-AR-A1AU TCGA-AR-A1AW TCGA-AR-A1AX TCGA-AR-A24K TCGA-AR-A24M 
       40.83        46.32        35.24        36.26        50.89        65.42 
TCGA-AR-A24N TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A24X 
       68.19        65.65         0.85        53.26        50.96        48.16 
TCGA-AR-A252 TCGA-AR-A2LE TCGA-AR-A2LH TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
       40.64       128.65        20.22        40.01        17.06        20.81 
TCGA-AR-A2LQ TCGA-B6-A0I5 TCGA-B6-A0IC TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IP 
       16.96       149.56        50.70       126.12        84.59       110.93 
TCGA-B6-A0RI TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RQ TCGA-B6-A0RT TCGA-B6-A0RV 
      223.40        78.02       172.96       140.48        89.46       157.41 
TCGA-B6-A0WT TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A0X7 
      177.40       129.57       129.70        28.24        68.94        58.88 
TCGA-B6-A1KI TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B7 TCGA-BH-A0BM TCGA-BH-A0BO 
       48.10        28.50        46.92        56.98        36.72        35.67 
TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BZ TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG 
       27.16        53.92        49.05        48.13        31.17        23.44 
TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0DO TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX 
       38.01        13.91        17.26        38.47        45.17        47.41 
TCGA-BH-A0E1 TCGA-BH-A0E7 TCGA-BH-A0EA TCGA-BH-A0EB TCGA-BH-A0EE TCGA-BH-A0H3 
       15.68        44.78        32.65        24.49        31.00        37.78 
TCGA-BH-A0H5 TCGA-BH-A0H6 TCGA-BH-A0HA TCGA-BH-A0HI TCGA-BH-A0HK TCGA-BH-A0HO 
       35.51        24.56        28.14        20.35         5.85         2.50 
TCGA-BH-A0HP TCGA-BH-A0RX TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A0W7 TCGA-BH-A18F 
       13.61         5.59         5.75        17.85        18.35         8.81 
TCGA-BH-A18G TCGA-BH-A18J TCGA-BH-A18M TCGA-BH-A18P TCGA-BH-A1ES TCGA-BH-A1ET 
        2.01        20.09        72.56        30.28       113.82        82.85 
TCGA-BH-A1EU TCGA-BH-A1EX TCGA-BH-A1F0 TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FG 
       42.28        49.58        25.81       120.62        74.73       122.89 
TCGA-BH-A1FH TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FR TCGA-BH-A1FU TCGA-BH-A28O 
       36.92        63.35        55.00       144.59        72.07        10.62 
TCGA-C8-A1HI TCGA-C8-A26V TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A275 TCGA-C8-A3M7 
        0.07         0.30         0.36         0.43         0.03         0.03 
TCGA-D8-A141 TCGA-D8-A145 TCGA-D8-A146 TCGA-D8-A1J8 TCGA-D8-A1JH TCGA-D8-A1JN 
        3.72         1.61        11.31         8.42         9.34         7.13 
TCGA-D8-A1JS TCGA-D8-A1JU TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A1XC 
        3.45         3.48         2.79         8.94         6.61         2.66 
TCGA-D8-A1XG TCGA-D8-A1XM TCGA-D8-A1XV TCGA-D8-A27E TCGA-D8-A27I TCGA-D8-A27K 
        6.44         7.17         4.80         5.98         6.08         3.88 
TCGA-D8-A27L TCGA-D8-A27P TCGA-D8-A27T TCGA-E2-A108 TCGA-E2-A10A TCGA-E2-A10E 
        4.11         0.76         4.44         4.08        11.57        13.74 
TCGA-E2-A10F TCGA-E2-A14N TCGA-E2-A14Q TCGA-E2-A14U TCGA-E2-A155 TCGA-E2-A156 
       11.84        44.38        32.02        27.55        18.18        15.81 
TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L 
       16.31        10.36        13.51        15.22         1.12        10.88 
TCGA-E2-A15P TCGA-E2-A1B1 TCGA-E2-A1B4 TCGA-E2-A1B5 TCGA-E2-A1B6 TCGA-E2-A1BC 
       10.36        44.75        29.95        25.45        11.11         9.76 
TCGA-E2-A1IF TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IU TCGA-E2-A1L6 
       31.43        23.84        17.03         0.46         4.18        43.13 
TCGA-E2-A1L9 TCGA-E2-A1LB TCGA-E2-A3DX TCGA-E9-A1R3 TCGA-E9-A1R4 TCGA-E9-A1RA 
       12.76        31.96         7.13         2.10         0.95         0.95 
TCGA-E9-A1RI TCGA-E9-A227 TCGA-E9-A243 TCGA-E9-A245 TCGA-E9-A248 TCGA-E9-A24A 
        1.58         0.79         1.41         0.82         0.69         0.33 
TCGA-E9-A2JT TCGA-E9-A3X8 TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1J2 
        0.76         0.76        35.57         8.48         8.55         4.57 
TCGA-EW-A1OX TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1P6 TCGA-EW-A1P7 TCGA-EW-A1PE 
       18.48        30.21        32.45        10.26        20.88         3.48 
TCGA-EW-A1PG TCGA-EW-A2FR TCGA-EW-A3E8 TCGA-GI-A2C8 TCGA-GM-A2DA TCGA-GM-A2DB 
       28.77        36.82        21.27         6.97       194.27        53.10 
TCGA-GM-A2DD TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DM TCGA-GM-A2DN 
       43.04        61.91        62.33        90.81        76.64        77.33 
TCGA-GM-A2DO TCGA-GM-A3NY TCGA-GM-A3XG TCGA-GM-A3XN TCGA-GM-A4E0 TCGA-LL-A440 
       53.33        24.43        32.25        53.92        57.63         0.66 
TCGA-LL-A442 TCGA-LL-A50Y TCGA-LQ-A4E4 TCGA-MS-A51U 
        3.58         6.90        15.91         2.79 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SJ TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04R 
       14.37        14.01         7.96        39.32        18.18        77.72 
TCGA-A2-A04X TCGA-A2-A0CT TCGA-A2-A0D4 TCGA-A2-A0ET TCGA-A2-A0EV TCGA-A2-A0T3 
       44.35        63.02        16.31        26.53        17.92        14.99 
TCGA-A2-A0T4 TCGA-A2-A0T7 TCGA-A2-A0YG TCGA-A2-A0YT TCGA-A2-A1FW TCGA-A2-A1FX 
       12.99        13.05        13.28        23.77         7.27        30.74 
TCGA-A2-A25E TCGA-A7-A0CD TCGA-A7-A26J TCGA-A7-A3IZ TCGA-A7-A4SF TCGA-A8-A06O 
       82.55         5.59         2.20         4.87        12.13        13.02 
TCGA-A8-A06Q TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06Z TCGA-A8-A076 TCGA-A8-A079 
        1.02        41.06        29.00         1.02        53.95         9.01 
TCGA-A8-A07B TCGA-A8-A07G TCGA-A8-A07I TCGA-A8-A07P TCGA-A8-A07W TCGA-A8-A085 
       33.01        18.94        14.01        10.98         9.99        36.95 
TCGA-A8-A086 TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08I TCGA-A8-A08J TCGA-A8-A08O 
       13.02        18.05        19.92        12.00        37.05        30.97 
TCGA-A8-A08P TCGA-A8-A08S TCGA-A8-A097 TCGA-A8-A09C TCGA-A8-A09E TCGA-A8-A09I 
       30.97        19.07        12.00         1.02        30.97        33.07 
TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09R TCGA-A8-A09W TCGA-A8-A0A4 TCGA-A8-A0A6 
       29.95        15.02         8.98         0.99        13.02        21.04 
TCGA-A8-A0A9 TCGA-AC-A23H TCGA-AC-A2BM TCGA-AC-A2FM TCGA-AC-A3OD TCGA-AN-A03X 
       13.02         2.66        38.20        26.04         1.15         0.33 
TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0XL 
        0.23         0.62         2.93         0.33         0.36         0.33 
TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A03T TCGA-AO-A0J2 
        5.59        80.28        81.63        84.69        39.02        19.23 
TCGA-AO-A0J3 TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JG TCGA-AO-A0JM TCGA-AO-A12E 
        9.93        59.61        64.60        14.76        60.03        57.27 
TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A1H2 TCGA-AR-A0TQ 
       49.94         0.53        17.79        14.43         7.56        49.32 
TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A1AK TCGA-AR-A1AP TCGA-AR-A24L TCGA-AR-A24R 
       43.17        83.87        51.22        39.95        73.02        57.37 
TCGA-AR-A24V TCGA-AR-A250 TCGA-AR-A254 TCGA-AR-A255 TCGA-AR-A2LK TCGA-AR-A2LL 
       54.18        56.12        39.85        34.78        42.84         7.33 
TCGA-B6-A0I9 TCGA-B6-A0IG TCGA-B6-A0RG TCGA-B6-A0RL TCGA-B6-A0RO TCGA-B6-A0WV 
       12.13       146.50        68.45        81.17       162.02        79.63 
TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0B4 TCGA-BH-A0BC TCGA-BH-A0BD TCGA-BH-A0C7 
      109.48        24.53        39.16        32.02        18.21        42.90 
TCGA-BH-A0DD TCGA-BH-A0DI TCGA-BH-A0DQ TCGA-BH-A0DZ TCGA-BH-A0E2 TCGA-BH-A0EI 
       45.80        22.13         3.22        16.27        12.36        24.43 
TCGA-BH-A0H7 TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A18L 
       23.05        51.29        27.25        28.50         5.92        26.66 
TCGA-BH-A18N TCGA-BH-A18R TCGA-BH-A18U TCGA-BH-A1EN TCGA-BH-A1EW TCGA-BH-A1F2 
       37.74        37.51        51.39        67.46        55.69        31.53 
TCGA-BH-A1F8 TCGA-BH-A201 TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HK TCGA-C8-A1HL 
       24.62         6.87         0.85         0.23         0.23         0.07 
TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A27A TCGA-C8-A3M8 TCGA-D8-A13Y TCGA-D8-A140 
        0.13         0.20        12.20         0.23         8.68         0.89 
TCGA-D8-A1J9 TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JI TCGA-D8-A1JT 
        8.15         5.85         8.98         1.87         0.69         4.04 
TCGA-D8-A1X9 TCGA-D8-A1XF TCGA-D8-A1XS TCGA-D8-A1XY TCGA-D8-A1Y0 TCGA-D8-A27G 
       12.49         6.48         1.64         2.66         5.46         6.87 
TCGA-D8-A27N TCGA-D8-A27R TCGA-D8-A27W TCGA-E2-A105 TCGA-E2-A109 TCGA-E2-A14O 
        4.77         2.96         0.49        38.24        38.53        38.53 
TCGA-E2-A14P TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A152 
       16.01        27.42        29.26        24.59        27.39        19.33 
TCGA-E2-A15A TCGA-E2-A15E TCGA-E2-A15H TCGA-E2-A15O TCGA-E2-A15S TCGA-E2-A15T 
       16.50        17.00         1.38        12.99         9.01         8.78 
TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IH TCGA-E2-A1LA TCGA-E9-A1R2 TCGA-E9-A1R5 
       32.32        24.82        21.63        15.22         0.62         1.38 
TCGA-E9-A1R7 TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A247 TCGA-E9-A295 TCGA-E9-A2JS 
        1.12         1.25         1.15         0.39         0.69         0.43 
TCGA-EW-A1IW TCGA-EW-A1J3 TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OY TCGA-EW-A1P5 
        8.28         8.28         7.46        19.56        19.50        12.00 
TCGA-EW-A1PD TCGA-EW-A2FS TCGA-EW-A2FW TCGA-GM-A2D9 TCGA-GM-A3NW 
        5.72        38.56         6.25        59.57        98.04 

$subtype3
TCGA-A1-A0SE TCGA-A1-A0SI TCGA-A2-A0CS TCGA-A2-A0CV TCGA-A2-A0CX TCGA-A7-A0DB 
       43.40        20.84        75.55        61.48        42.84         4.60 
TCGA-A8-A06Y TCGA-A8-A07F TCGA-A8-A07Z TCGA-A8-A084 TCGA-A8-A08C TCGA-A8-A092 
       26.01        18.94        28.04        15.06        19.96        16.01 
TCGA-A8-A093 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A0A1 TCGA-A8-A0A2 TCGA-A8-A0AB 
       17.92         9.99        12.00        12.00        19.00        17.00 
TCGA-AN-A03Y TCGA-AN-A0FK TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AO-A03N TCGA-AO-A0J7 
        0.33         6.97        12.33         0.30        54.08         8.55 
TCGA-AO-A0J9 TCGA-AR-A0TR TCGA-AR-A1AV TCGA-B6-A0IB TCGA-B6-A0IH TCGA-B6-A0RH 
       41.26         5.26        42.58       129.57       112.37       188.98 
TCGA-B6-A0RP TCGA-BH-A0B5 TCGA-BH-A0BA TCGA-BH-A0BJ TCGA-BH-A0BV TCGA-BH-A0C1 
      102.77        48.36        37.22        21.70        49.94        43.99 
TCGA-BH-A0DP TCGA-BH-A0E9 TCGA-BH-A0GZ TCGA-BH-A0HQ TCGA-BH-A0HU TCGA-BH-A18K 
       15.65        46.19        10.78        36.85        12.89        90.81 
TCGA-BH-A1EV TCGA-BH-A202 TCGA-BH-A28Q TCGA-C8-A274 TCGA-D8-A1JA TCGA-D8-A1XO 
       12.00         0.72         6.44         0.03         0.59         7.96 
TCGA-D8-A1XR TCGA-D8-A27V TCGA-E2-A107 TCGA-E2-A10B TCGA-E2-A153 TCGA-E2-A154 
        5.52         2.40        25.08        24.59        19.27        10.68 
TCGA-E2-A15G TCGA-E2-A1BD TCGA-E2-A1L8 TCGA-E2-A2P5 TCGA-E2-A2P6 TCGA-E9-A1RC 
       10.36        10.42        33.37        10.72         5.49        40.37 
TCGA-E9-A1RD TCGA-E9-A249 TCGA-E9-A3HO TCGA-EW-A1PC 
        0.66         0.92         0.62         6.12 

$subtype4
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U 
       31.79        28.01        19.17        17.98        64.11        22.03 
TCGA-A2-A0CM TCGA-A2-A0CW TCGA-A2-A0D0 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0EY 
       24.79        57.53        21.14        25.02        67.50        15.95 
TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YE 
       27.12        44.84        42.35        11.08         7.96         8.28 
TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A2-A25B TCGA-A2-A3XX TCGA-A2-A3Y0 
       10.72        21.73        12.20         8.48        38.40        28.21 
TCGA-A2-A4S3 TCGA-A7-A0CE TCGA-A7-A0CJ TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E 
        3.42         8.32         6.18        12.26         8.78         9.44 
TCGA-A7-A26G TCGA-A7-A26I TCGA-A7-A2KD TCGA-A7-A4SA TCGA-A7-A4SD TCGA-A8-A06R 
        6.87         4.01         5.95         7.92         5.52        17.95 
TCGA-A8-A06X TCGA-A8-A075 TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08B 
       31.00        17.00         9.99         8.98         9.96        23.08 
TCGA-A8-A08L TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A09A TCGA-A8-A09D TCGA-A8-A09N 
        9.99         0.99        33.99         9.99        13.02         1.02 
TCGA-A8-A09Q TCGA-AC-A23C TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AN-A04C TCGA-AN-A04D 
       25.02         0.95        38.53         1.02         1.78         1.71 
TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AS 
        7.99         7.33         6.48         0.16         0.30         0.30 
TCGA-AN-A0AT TCGA-AN-A0FD TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FT TCGA-AN-A0FX 
        0.33         6.41         7.92         7.56         6.02         0.33 
TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XN TCGA-AN-A0XT TCGA-AN-A0XU TCGA-AO-A03M 
        0.33         0.33         0.33         0.33         0.33        47.84 
TCGA-AO-A03V TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JB TCGA-AO-A0JL TCGA-AO-A124 
       29.13         9.67        25.48        37.81        43.36       102.54 
TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F TCGA-AO-A12G TCGA-AO-A1KR TCGA-AQ-A04J 
       96.10        64.04        48.36        41.59        70.36         5.23 
TCGA-AQ-A04L TCGA-AQ-A0Y5 TCGA-AR-A0TP TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TV 
      110.43         5.62        78.64        37.41        55.20        29.72 
TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U4 TCGA-AR-A1AH 
       24.30        55.86         0.26         6.08        53.49        75.55 
TCGA-AR-A1AI TCGA-AR-A1AY TCGA-AR-A24H TCGA-AR-A24Q TCGA-AR-A24S TCGA-AR-A24U 
       61.84        20.19       109.58        66.02        62.07        53.36 
TCGA-AR-A24Z TCGA-AR-A251 TCGA-AR-A256 TCGA-AR-A2LR TCGA-B6-A0I1 TCGA-B6-A0I2 
       51.75        45.14        93.83        20.38        77.62       125.79 
TCGA-B6-A0IE TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IO TCGA-B6-A0IQ TCGA-B6-A0RE 
       65.69       176.98        18.77       110.14       127.27       211.53 
TCGA-B6-A0RS TCGA-B6-A0RU TCGA-B6-A0WX TCGA-B6-A0WY TCGA-B6-A0X1 TCGA-B6-A1KF 
      100.67       131.21        21.47       113.75       186.44       101.52 
TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B6 TCGA-BH-A0B9 TCGA-BH-A0BF 
       38.79        20.45        39.55        56.94        51.68        25.68 
TCGA-BH-A0BG TCGA-BH-A0BL TCGA-BH-A0BP TCGA-BH-A0BR TCGA-BH-A0BW TCGA-BH-A0C0 
       24.85        44.02        48.69        53.65        11.67        41.75 
TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0GY TCGA-BH-A0H9 TCGA-BH-A0WA 
       48.23         4.37         9.60        30.15        41.00        12.23 
TCGA-BH-A18Q TCGA-BH-A18T TCGA-BH-A18V TCGA-BH-A1EY TCGA-BH-A1F6 TCGA-BH-A1FM 
       55.63         7.36        51.12        17.69        97.48        45.63 
TCGA-BH-A1FN TCGA-BH-A203 TCGA-BH-A208 TCGA-BH-A209 TCGA-C8-A1HJ TCGA-C8-A1HM 
       72.07        38.60        57.83       130.16         0.16         0.20 
TCGA-C8-A1HN TCGA-C8-A26W TCGA-C8-A278 TCGA-C8-A27B TCGA-D8-A13Z TCGA-D8-A142 
        0.07         0.23         0.03         0.99         6.90         2.01 
TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JJ TCGA-D8-A1JK 
        5.65         0.07         3.16         6.15         9.01         3.58 
TCGA-D8-A1JL TCGA-D8-A1JM TCGA-D8-A1JP TCGA-D8-A1X5 TCGA-D8-A1XA TCGA-D8-A1XJ 
        8.71         7.82         5.49         5.62         9.01        11.57 
TCGA-D8-A1XK TCGA-D8-A1XL TCGA-D8-A1XQ TCGA-D8-A1XU TCGA-D8-A1XW TCGA-D8-A1XZ 
       10.72        10.49         5.82         4.90         3.85         3.95 
TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Y 
        7.46         4.60         4.73        27.78        22.75        22.62 
TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A15M TCGA-E2-A1AZ 
       17.03        19.43        14.79        16.93         7.69        64.57 
TCGA-E2-A1II TCGA-E2-A1IO TCGA-E2-A1L7 TCGA-E2-A1LE TCGA-E2-A1LH TCGA-E2-A1LI 
       27.95        14.73        20.81        28.90        94.52        90.41 
TCGA-E2-A1LL TCGA-E9-A1RH TCGA-E9-A226 TCGA-E9-A244 TCGA-EW-A1J1 TCGA-EW-A1OV 
       33.34         0.46         0.53         0.66         9.27        17.16 
TCGA-EW-A1OW TCGA-EW-A1OZ TCGA-EW-A1P4 TCGA-EW-A1P8 TCGA-EW-A1PA TCGA-EW-A1PB 
       15.22        30.94        16.47         7.86         8.78        19.99 
TCGA-EW-A1PF TCGA-EW-A1PH TCGA-EW-A2FV TCGA-EW-A3U0 TCGA-GI-A2C9 TCGA-GM-A2DF 
        4.57         4.57         7.82         7.53        23.11        42.71 
TCGA-GM-A2DH TCGA-GM-A3XL TCGA-LL-A441 
       42.28        56.45         2.99 

$subtype5
TCGA-A2-A0CU TCGA-A2-A0EU TCGA-A2-A1FV TCGA-A2-A1G0 TCGA-A2-A25D TCGA-A7-A13F 
        5.16        24.10        15.12        12.49         7.99         6.44 
TCGA-A8-A07L TCGA-A8-A082 TCGA-A8-A091 TCGA-AO-A03R TCGA-AO-A0JI TCGA-AO-A1KP 
       17.00        18.05        19.07        56.12        38.53        82.62 
TCGA-AR-A0U3 TCGA-B6-A0IA TCGA-B6-A0WS TCGA-B6-A0WW TCGA-B6-A1KC TCGA-B6-A2IU 
       74.40       220.87        97.48        17.95        43.59       159.12 
TCGA-BH-A0AY TCGA-BH-A0BT TCGA-BH-A0DS TCGA-BH-A0H0 TCGA-BH-A0HB TCGA-BH-A18I 
       25.55        45.57         2.53        15.16        26.50         7.23 
TCGA-BH-A18S TCGA-BH-A1EO TCGA-BH-A1F5 TCGA-BH-A1FC TCGA-BH-A1FD TCGA-BH-A204 
       66.05        91.99        89.16       114.12        33.14        83.31 
TCGA-D8-A1X6 TCGA-D8-A1XD TCGA-D8-A1XT TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A1Y3 
        7.76         5.10         6.35         3.78         2.37         4.08 
TCGA-E2-A10C TCGA-E2-A15F TCGA-E2-A15R TCGA-E2-A1B0 TCGA-E2-A1IN TCGA-E2-A1LG 
       28.04        15.39        10.85        41.79        12.89        11.51 
TCGA-E2-A1LK TCGA-E9-A1R6 TCGA-E9-A1RB TCGA-E9-A1RE TCGA-EW-A1P0 TCGA-GM-A2DC 
        8.75         2.76         0.69         1.55        36.85        53.52 

subtype1 subtype2 subtype3 subtype4 subtype5 
    0.03     0.07     0.03     0.03     0.69 
subtype1 subtype2 subtype3 subtype4 subtype5 
  223.40   162.02   188.98   211.53   220.87 
subtype1 subtype2 subtype3 subtype4 subtype5 
  20.040   16.310   16.505   17.690   18.000 
[1] "0.0 - 223.4 (20.0)" "0.1 - 162.0 (16.3)" "0.0 - 189.0 (16.5)"
[4] "0.0 - 211.5 (17.7)" "0.7 - 220.9 (18.0)"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
 [13] "subtype4" "subtype2" "subtype1" "subtype4" "subtype1" "subtype2"
 [19] "subtype4" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
 [25] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype5" "subtype3" "subtype4" "subtype3"
 [37] "subtype4" "subtype1" "subtype4" "subtype1" "subtype2" "subtype1"
 [43] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype2"
 [49] "subtype5" "subtype2" "subtype1" "subtype1" "subtype4" "subtype1"
 [55] "subtype1" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
 [61] "subtype1" "subtype4" "subtype2" "subtype2" "subtype1" "subtype1"
 [67] "subtype2" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
 [73] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype4"
 [79] "subtype2" "subtype5" "subtype2" "subtype2" "subtype1" "subtype5"
 [85] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype4"
 [91] "subtype1" "subtype5" "subtype2" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype1"
[103] "subtype4" "subtype2" "subtype4" "subtype1" "subtype1" "subtype4"
[109] "subtype1" "subtype4" "subtype3" "subtype4" "subtype4" "subtype5"
[115] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
[121] "subtype4" "subtype2" "subtype4" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype2"
[133] "subtype1" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
[139] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[145] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype5"
[151] "subtype4" "subtype2" "subtype4" "subtype1" "subtype4" "subtype2"
[157] "subtype3" "subtype5" "subtype3" "subtype2" "subtype2" "subtype1"
[163] "subtype4" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype4" "subtype2" "subtype2" "subtype4" "subtype2" "subtype1"
[175] "subtype4" "subtype1" "subtype5" "subtype3" "subtype3" "subtype1"
[181] "subtype2" "subtype3" "subtype4" "subtype3" "subtype2" "subtype4"
[187] "subtype2" "subtype2" "subtype2" "subtype2" "subtype4" "subtype4"
[193] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[199] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[205] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
[211] "subtype4" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[217] "subtype2" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
[223] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[229] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[235] "subtype2" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[241] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype1"
[247] "subtype4" "subtype3" "subtype4" "subtype1" "subtype1" "subtype4"
[253] "subtype2" "subtype2" "subtype4" "subtype4" "subtype4" "subtype2"
[259] "subtype4" "subtype3" "subtype3" "subtype1" "subtype1" "subtype4"
[265] "subtype4" "subtype1" "subtype2" "subtype2" "subtype4" "subtype3"
[271] "subtype2" "subtype2" "subtype5" "subtype2" "subtype1" "subtype4"
[277] "subtype2" "subtype2" "subtype4" "subtype1" "subtype4" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype4" "subtype1" "subtype2"
[289] "subtype2" "subtype1" "subtype2" "subtype5" "subtype1" "subtype4"
[295] "subtype2" "subtype4" "subtype1" "subtype1" "subtype1" "subtype4"
[301] "subtype1" "subtype1" "subtype4" "subtype2" "subtype4" "subtype4"
[307] "subtype1" "subtype1" "subtype5" "subtype2" "subtype4" "subtype2"
[313] "subtype2" "subtype2" "subtype4" "subtype4" "subtype4" "subtype2"
[319] "subtype1" "subtype4" "subtype2" "subtype3" "subtype4" "subtype4"
[325] "subtype4" "subtype4" "subtype1" "subtype4" "subtype2" "subtype4"
[331] "subtype4" "subtype2" "subtype5" "subtype4" "subtype4" "subtype4"
[337] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[343] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[349] "subtype1" "subtype4" "subtype4" "subtype1" "subtype2" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype4" "subtype2" "subtype4"
[361] "subtype1" "subtype4" "subtype2" "subtype1" "subtype1" "subtype4"
[367] "subtype2" "subtype4" "subtype1" "subtype2" "subtype2" "subtype4"
[373] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[379] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype1"
[385] "subtype2" "subtype5" "subtype3" "subtype1" "subtype4" "subtype2"
[391] "subtype3" "subtype4" "subtype4" "subtype1" "subtype1" "subtype4"
[397] "subtype1" "subtype4" "subtype4" "subtype2" "subtype3" "subtype1"
[403] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[409] "subtype4" "subtype1" "subtype4" "subtype1" "subtype5" "subtype1"
[415] "subtype2" "subtype5" "subtype4" "subtype4" "subtype1" "subtype1"
[421] "subtype4" "subtype1" "subtype1" "subtype1" "subtype5" "subtype4"
[427] "subtype1" "subtype2" "subtype5" "subtype2" "subtype4" "subtype4"
[433] "subtype5" "subtype1" "subtype1" "subtype4" "subtype2" "subtype3"
[439] "subtype4" "subtype1" "subtype4" "subtype3" "subtype2" "subtype2"
[445] "subtype4" "subtype4" "subtype3" "subtype4" "subtype1" "subtype1"
[451] "subtype4" "subtype1" "subtype4" "subtype1" "subtype5" "subtype3"
[457] "subtype4" "subtype1" "subtype4" "subtype3" "subtype1" "subtype2"
[463] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[469] "subtype4" "subtype1" "subtype3" "subtype2" "subtype5" "subtype1"
[475] "subtype1" "subtype1" "subtype2" "subtype4" "subtype1" "subtype2"
[481] "subtype4" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[487] "subtype2" "subtype4" "subtype3" "subtype5" "subtype1" "subtype1"
[493] "subtype1" "subtype2" "subtype4" "subtype1" "subtype5" "subtype1"
[499] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[505] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[511] "subtype1" "subtype4" "subtype1" "subtype1" "subtype5" "subtype1"
[517] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype4"
[523] "subtype2" "subtype5" "subtype4" "subtype2" "subtype4" "subtype2"
[529] "subtype5" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[535] "subtype1" "subtype4" "subtype1" "subtype2" "subtype5" "subtype4"
[541] "subtype2" "subtype1" "subtype5" "subtype5" "subtype1" "subtype1"
[547] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype1"
[553] "subtype1" "subtype2" "subtype3" "subtype4" "subtype5" "subtype4"
[559] "subtype4" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[565] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype1"
[571] "subtype4" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[577] "subtype1" "subtype4" "subtype2" "subtype4" "subtype1" "subtype2"
[583] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype4"
[589] "subtype1" "subtype1" "subtype4" "subtype1" "subtype2" "subtype3"
[595] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype1"
[601] "subtype2" "subtype4" "subtype4" "subtype4" "subtype4" "subtype1"
[607] "subtype4" "subtype1" "subtype2" "subtype1" "subtype4" "subtype5"
[613] "subtype1" "subtype1" "subtype2" "subtype4" "subtype1" "subtype1"
[619] "subtype5" "subtype2" "subtype1" "subtype4" "subtype4" "subtype4"
[625] "subtype1" "subtype3" "subtype4" "subtype3" "subtype2" "subtype5"
[631] "subtype4" "subtype1" "subtype4" "subtype2" "subtype4" "subtype2"
[637] "subtype5" "subtype5" "subtype5" "subtype1" "subtype4" "subtype2"
[643] "subtype4" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[649] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[655] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype5"
[661] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[667] "subtype4" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[673] "subtype4" "subtype4" "subtype4" "subtype4" "subtype2" "subtype3"
[679] "subtype3" "subtype1" "subtype1" "subtype4" "subtype4" "subtype2"
[685] "subtype1" "subtype1" "subtype2" "subtype5" "subtype3" "subtype2"
[691] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[697] "subtype1" "subtype5" "subtype2" "subtype2" "subtype4" "subtype5"
[703] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[709] "subtype2" "subtype1" "subtype2" "subtype2" "subtype4" "subtype1"
[715] "subtype1" "subtype1" "subtype5" "subtype4" "subtype1" "subtype1"
[721] "subtype4" "subtype3" "subtype1" "subtype2" "subtype1" "subtype4"
[727] "subtype5" "subtype4" "subtype4" "subtype5" "subtype4" "subtype3"
[733] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[739] "subtype5" "subtype2" "subtype1" "subtype5" "subtype3" "subtype3"
[745] "subtype5" "subtype2" "subtype2" "subtype4" "subtype1" "subtype4"
[751] "subtype1" "subtype1" "subtype4" "subtype1" "subtype2" "subtype1"
[757] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
[763] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype4"
[769] "subtype1" "subtype2" "subtype2" "subtype2" "subtype4" "subtype4"
[775] "subtype1" "subtype2" "subtype4" "subtype5" "subtype1" "subtype1"
[781] "subtype4" "subtype2" "subtype1" "subtype1" "subtype4" "subtype4"
[787] "subtype4" "subtype3" "subtype2" "subtype1" "subtype4" "subtype1"
[793] "subtype4" "subtype1" "subtype2" "subtype4" "subtype2" "subtype1"
[799] "subtype4" "subtype1" "subtype4" "subtype2" "subtype1" "subtype1"
[805] "subtype5" "subtype1" "subtype4" "subtype4" "subtype1" "subtype1"
[811] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[817] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype4"
[823] "subtype1" "subtype1" "subtype1" "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
 [13] "subtype4" "subtype2" "subtype1" "subtype4" "subtype1" "subtype2"
 [19] "subtype4" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
 [25] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype5" "subtype3" "subtype4" "subtype3"
 [37] "subtype4" "subtype1" "subtype4" "subtype1" "subtype2" "subtype1"
 [43] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype2"
 [49] "subtype5" "subtype2" "subtype1" "subtype1" "subtype4" "subtype1"
 [55] "subtype1" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
 [61] "subtype1" "subtype4" "subtype2" "subtype2" "subtype1" "subtype1"
 [67] "subtype2" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
 [73] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype4"
 [79] "subtype2" "subtype5" "subtype2" "subtype2" "subtype1" "subtype5"
 [85] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype4"
 [91] "subtype1" "subtype5" "subtype2" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype1"
[103] "subtype4" "subtype2" "subtype4" "subtype1" "subtype1" "subtype4"
[109] "subtype1" "subtype4" "subtype3" "subtype4" "subtype4" "subtype5"
[115] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
[121] "subtype4" "subtype2" "subtype4" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype2"
[133] "subtype1" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
[139] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[145] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype5"
[151] "subtype4" "subtype2" "subtype4" "subtype1" "subtype4" "subtype2"
[157] "subtype3" "subtype5" "subtype3" "subtype2" "subtype2" "subtype1"
[163] "subtype4" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype4" "subtype2" "subtype2" "subtype4" "subtype2" "subtype1"
[175] "subtype4" "subtype1" "subtype5" "subtype3" "subtype3" "subtype1"
[181] "subtype2" "subtype3" "subtype4" "subtype3" "subtype2" "subtype4"
[187] "subtype2" "subtype2" "subtype2" "subtype2" "subtype4" "subtype4"
[193] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[199] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[205] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
[211] "subtype4" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[217] "subtype2" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
[223] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[229] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[235] "subtype2" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[241] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype1"
[247] "subtype4" "subtype3" "subtype4" "subtype1" "subtype1" "subtype4"
[253] "subtype2" "subtype2" "subtype4" "subtype4" "subtype4" "subtype2"
[259] "subtype4" "subtype3" "subtype3" "subtype1" "subtype1" "subtype4"
[265] "subtype4" "subtype1" "subtype2" "subtype2" "subtype4" "subtype3"
[271] "subtype2" "subtype2" "subtype5" "subtype2" "subtype1" "subtype4"
[277] "subtype2" "subtype2" "subtype4" "subtype1" "subtype4" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype4" "subtype1" "subtype2"
[289] "subtype2" "subtype1" "subtype2" "subtype5" "subtype1" "subtype4"
[295] "subtype2" "subtype4" "subtype1" "subtype1" "subtype1" "subtype4"
[301] "subtype1" "subtype1" "subtype4" "subtype2" "subtype4" "subtype4"
[307] "subtype1" "subtype1" "subtype5" "subtype2" "subtype4" "subtype2"
[313] "subtype2" "subtype2" "subtype4" "subtype4" "subtype4" "subtype2"
[319] "subtype1" "subtype4" "subtype2" "subtype3" "subtype4" "subtype4"
[325] "subtype4" "subtype4" "subtype1" "subtype4" "subtype2" "subtype4"
[331] "subtype4" "subtype2" "subtype5" "subtype4" "subtype4" "subtype4"
[337] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[343] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[349] "subtype1" "subtype4" "subtype4" "subtype1" "subtype2" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype4" "subtype2" "subtype4"
[361] "subtype1" "subtype4" "subtype2" "subtype1" "subtype1" "subtype4"
[367] "subtype2" "subtype4" "subtype1" "subtype2" "subtype2" "subtype4"
[373] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[379] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype1"
[385] "subtype2" "subtype5" "subtype3" "subtype1" "subtype4" "subtype2"
[391] "subtype3" "subtype4" "subtype4" "subtype1" "subtype1" "subtype4"
[397] "subtype1" "subtype4" "subtype4" "subtype2" "subtype3" "subtype1"
[403] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[409] "subtype4" "subtype1" "subtype4" "subtype1" "subtype5" "subtype1"
[415] "subtype2" "subtype5" "subtype4" "subtype4" "subtype1" "subtype1"
[421] "subtype4" "subtype1" "subtype1" "subtype1" "subtype5" "subtype4"
[427] "subtype1" "subtype2" "subtype5" "subtype2" "subtype4" "subtype4"
[433] "subtype5" "subtype1" "subtype1" "subtype4" "subtype2" "subtype3"
[439] "subtype4" "subtype1" "subtype4" "subtype3" "subtype2" "subtype2"
[445] "subtype4" "subtype4" "subtype3" "subtype4" "subtype1" "subtype1"
[451] "subtype4" "subtype1" "subtype4" "subtype1" "subtype5" "subtype3"
[457] "subtype4" "subtype1" "subtype4" "subtype3" "subtype1" "subtype2"
[463] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[469] "subtype4" "subtype1" "subtype3" "subtype2" "subtype5" "subtype1"
[475] "subtype1" "subtype1" "subtype2" "subtype4" "subtype1" "subtype2"
[481] "subtype4" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[487] "subtype2" "subtype4" "subtype3" "subtype5" "subtype1" "subtype1"
[493] "subtype1" "subtype2" "subtype4" "subtype1" "subtype5" "subtype1"
[499] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[505] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[511] "subtype1" "subtype4" "subtype1" "subtype1" "subtype5" "subtype1"
[517] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype4"
[523] "subtype2" "subtype5" "subtype4" "subtype2" "subtype4" "subtype2"
[529] "subtype5" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[535] "subtype1" "subtype4" "subtype1" "subtype2" "subtype5" "subtype4"
[541] "subtype2" "subtype1" "subtype5" "subtype5" "subtype1" "subtype1"
[547] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype1"
[553] "subtype1" "subtype2" "subtype3" "subtype4" "subtype5" "subtype4"
[559] "subtype4" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[565] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype1"
[571] "subtype4" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[577] "subtype1" "subtype4" "subtype2" "subtype4" "subtype1" "subtype2"
[583] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype4"
[589] "subtype1" "subtype1" "subtype4" "subtype1" "subtype2" "subtype3"
[595] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype1"
[601] "subtype2" "subtype4" "subtype4" "subtype4" "subtype4" "subtype1"
[607] "subtype4" "subtype1" "subtype2" "subtype1" "subtype4" "subtype5"
[613] "subtype1" "subtype1" "subtype2" "subtype4" "subtype1" "subtype1"
[619] "subtype5" "subtype2" "subtype1" "subtype4" "subtype4" "subtype4"
[625] "subtype1" "subtype3" "subtype4" "subtype3" "subtype2" "subtype5"
[631] "subtype4" "subtype1" "subtype4" "subtype2" "subtype4" "subtype2"
[637] "subtype5" "subtype5" "subtype5" "subtype1" "subtype4" "subtype2"
[643] "subtype4" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[649] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[655] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype5"
[661] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[667] "subtype4" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[673] "subtype4" "subtype4" "subtype4" "subtype4" "subtype2" "subtype3"
[679] "subtype3" "subtype1" "subtype1" "subtype4" "subtype4" "subtype2"
[685] "subtype1" "subtype1" "subtype2" "subtype5" "subtype3" "subtype2"
[691] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[697] "subtype1" "subtype5" "subtype2" "subtype2" "subtype4" "subtype5"
[703] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[709] "subtype2" "subtype1" "subtype2" "subtype2" "subtype4" "subtype1"
[715] "subtype1" "subtype1" "subtype5" "subtype4" "subtype1" "subtype1"
[721] "subtype4" "subtype3" "subtype1" "subtype2" "subtype1" "subtype4"
[727] "subtype5" "subtype4" "subtype4" "subtype5" "subtype4" "subtype3"
[733] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[739] "subtype5" "subtype2" "subtype1" "subtype5" "subtype3" "subtype3"
[745] "subtype5" "subtype2" "subtype2" "subtype4" "subtype1" "subtype4"
[751] "subtype1" "subtype1" "subtype4" "subtype1" "subtype2" "subtype1"
[757] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
[763] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype4"
[769] "subtype1" "subtype2" "subtype2" "subtype2" "subtype4" "subtype4"
[775] "subtype1" "subtype2" "subtype4" "subtype5" "subtype1" "subtype1"
[781] "subtype4" "subtype2" "subtype1" "subtype1" "subtype4" "subtype4"
[787] "subtype4" "subtype3" "subtype2" "subtype1" "subtype4" "subtype1"
[793] "subtype4" "subtype1" "subtype2" "subtype4" "subtype2" "subtype1"
[799] "subtype4" "subtype1" "subtype4" "subtype2" "subtype1" "subtype1"
[805] "subtype5" "subtype1" "subtype4" "subtype4" "subtype1" "subtype1"
[811] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[817] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype4"
[823] "subtype1" "subtype1" "subtype1" "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
 [13] "subtype4" "subtype2" "subtype1" "subtype4" "subtype1" "subtype2"
 [19] "subtype4" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
 [25] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype5" "subtype3" "subtype4" "subtype3"
 [37] "subtype4" "subtype1" "subtype4" "subtype1" "subtype2" "subtype1"
 [43] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype2"
 [49] "subtype5" "subtype2" "subtype1" "subtype1" "subtype4" "subtype1"
 [55] "subtype1" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
 [61] "subtype1" "subtype4" "subtype2" "subtype2" "subtype1" "subtype1"
 [67] "subtype2" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
 [73] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype4"
 [79] "subtype2" "subtype5" "subtype2" "subtype2" "subtype1" "subtype5"
 [85] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype4"
 [91] "subtype1" "subtype5" "subtype2" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype1"
[103] "subtype4" "subtype2" "subtype4" "subtype1" "subtype1" "subtype4"
[109] "subtype1" "subtype4" "subtype3" "subtype4" "subtype4" "subtype5"
[115] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
[121] "subtype4" "subtype2" "subtype4" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype2"
[133] "subtype1" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
[139] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[145] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype5"
[151] "subtype4" "subtype2" "subtype4" "subtype1" "subtype4" "subtype2"
[157] "subtype3" "subtype5" "subtype3" "subtype2" "subtype2" "subtype1"
[163] "subtype4" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype4" "subtype2" "subtype2" "subtype4" "subtype2" "subtype1"
[175] "subtype4" "subtype1" "subtype5" "subtype3" "subtype3" "subtype1"
[181] "subtype2" "subtype3" "subtype4" "subtype3" "subtype2" "subtype4"
[187] "subtype2" "subtype2" "subtype2" "subtype2" "subtype4" "subtype4"
[193] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[199] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[205] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
[211] "subtype4" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[217] "subtype2" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
[223] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[229] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[235] "subtype2" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[241] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype1"
[247] "subtype4" "subtype3" "subtype4" "subtype1" "subtype1" "subtype4"
[253] "subtype2" "subtype2" "subtype4" "subtype4" "subtype4" "subtype2"
[259] "subtype4" "subtype3" "subtype3" "subtype1" "subtype1" "subtype4"
[265] "subtype4" "subtype1" "subtype2" "subtype2" "subtype4" "subtype3"
[271] "subtype2" "subtype2" "subtype5" "subtype2" "subtype1" "subtype4"
[277] "subtype2" "subtype2" "subtype4" "subtype1" "subtype4" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype4" "subtype1" "subtype2"
[289] "subtype2" "subtype1" "subtype2" "subtype5" "subtype1" "subtype4"
[295] "subtype2" "subtype4" "subtype1" "subtype1" "subtype1" "subtype4"
[301] "subtype1" "subtype1" "subtype4" "subtype2" "subtype4" "subtype4"
[307] "subtype1" "subtype1" "subtype5" "subtype2" "subtype4" "subtype2"
[313] "subtype2" "subtype2" "subtype4" "subtype4" "subtype4" "subtype2"
[319] "subtype1" "subtype4" "subtype2" "subtype3" "subtype4" "subtype4"
[325] "subtype4" "subtype4" "subtype1" "subtype4" "subtype2" "subtype4"
[331] "subtype4" "subtype2" "subtype5" "subtype4" "subtype4" "subtype4"
[337] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[343] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[349] "subtype1" "subtype4" "subtype4" "subtype1" "subtype2" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype4" "subtype2" "subtype4"
[361] "subtype1" "subtype4" "subtype2" "subtype1" "subtype1" "subtype4"
[367] "subtype2" "subtype4" "subtype1" "subtype2" "subtype2" "subtype4"
[373] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[379] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype1"
[385] "subtype2" "subtype5" "subtype3" "subtype1" "subtype4" "subtype2"
[391] "subtype3" "subtype4" "subtype4" "subtype1" "subtype1" "subtype4"
[397] "subtype1" "subtype4" "subtype4" "subtype2" "subtype3" "subtype1"
[403] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[409] "subtype4" "subtype1" "subtype4" "subtype1" "subtype5" "subtype1"
[415] "subtype2" "subtype5" "subtype4" "subtype4" "subtype1" "subtype1"
[421] "subtype4" "subtype1" "subtype1" "subtype1" "subtype5" "subtype4"
[427] "subtype1" "subtype2" "subtype5" "subtype2" "subtype4" "subtype4"
[433] "subtype5" "subtype1" "subtype1" "subtype4" "subtype2" "subtype3"
[439] "subtype4" "subtype1" "subtype4" "subtype3" "subtype2" "subtype2"
[445] "subtype4" "subtype4" "subtype3" "subtype4" "subtype1" "subtype1"
[451] "subtype4" "subtype1" "subtype4" "subtype1" "subtype5" "subtype3"
[457] "subtype4" "subtype1" "subtype4" "subtype3" "subtype1" "subtype2"
[463] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[469] "subtype4" "subtype1" "subtype3" "subtype2" "subtype5" "subtype1"
[475] "subtype1" "subtype1" "subtype2" "subtype4" "subtype1" "subtype2"
[481] "subtype4" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[487] "subtype2" "subtype4" "subtype3" "subtype5" "subtype1" "subtype1"
[493] "subtype1" "subtype2" "subtype4" "subtype1" "subtype5" "subtype1"
[499] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[505] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[511] "subtype1" "subtype4" "subtype1" "subtype1" "subtype5" "subtype1"
[517] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype4"
[523] "subtype2" "subtype5" "subtype4" "subtype2" "subtype4" "subtype2"
[529] "subtype5" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[535] "subtype1" "subtype4" "subtype1" "subtype2" "subtype5" "subtype4"
[541] "subtype2" "subtype1" "subtype5" "subtype5" "subtype1" "subtype1"
[547] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype1"
[553] "subtype1" "subtype2" "subtype3" "subtype4" "subtype5" "subtype4"
[559] "subtype4" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[565] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype1"
[571] "subtype4" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[577] "subtype1" "subtype4" "subtype2" "subtype4" "subtype1" "subtype2"
[583] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype4"
[589] "subtype1" "subtype1" "subtype4" "subtype1" "subtype2" "subtype3"
[595] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype1"
[601] "subtype2" "subtype4" "subtype4" "subtype4" "subtype4" "subtype1"
[607] "subtype4" "subtype1" "subtype2" "subtype1" "subtype4" "subtype5"
[613] "subtype1" "subtype1" "subtype2" "subtype4" "subtype1" "subtype1"
[619] "subtype5" "subtype2" "subtype1" "subtype4" "subtype4" "subtype4"
[625] "subtype1" "subtype3" "subtype4" "subtype3" "subtype2" "subtype5"
[631] "subtype4" "subtype1" "subtype4" "subtype2" "subtype4" "subtype2"
[637] "subtype5" "subtype5" "subtype5" "subtype1" "subtype4" "subtype2"
[643] "subtype4" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[649] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[655] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype5"
[661] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[667] "subtype4" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[673] "subtype4" "subtype4" "subtype4" "subtype4" "subtype2" "subtype3"
[679] "subtype3" "subtype1" "subtype1" "subtype4" "subtype4" "subtype2"
[685] "subtype1" "subtype1" "subtype2" "subtype5" "subtype3" "subtype2"
[691] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[697] "subtype1" "subtype5" "subtype2" "subtype2" "subtype4" "subtype5"
[703] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[709] "subtype2" "subtype1" "subtype2" "subtype2" "subtype4" "subtype1"
[715] "subtype1" "subtype1" "subtype5" "subtype4" "subtype1" "subtype1"
[721] "subtype4" "subtype3" "subtype1" "subtype2" "subtype1" "subtype4"
[727] "subtype5" "subtype4" "subtype4" "subtype5" "subtype4" "subtype3"
[733] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[739] "subtype5" "subtype2" "subtype1" "subtype5" "subtype3" "subtype3"
[745] "subtype5" "subtype2" "subtype2" "subtype4" "subtype1" "subtype4"
[751] "subtype1" "subtype1" "subtype4" "subtype1" "subtype2" "subtype1"
[757] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
[763] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype4"
[769] "subtype1" "subtype2" "subtype2" "subtype2" "subtype4" "subtype4"
[775] "subtype1" "subtype2" "subtype4" "subtype5" "subtype1" "subtype1"
[781] "subtype4" "subtype2" "subtype1" "subtype1" "subtype4" "subtype4"
[787] "subtype4" "subtype3" "subtype2" "subtype1" "subtype4" "subtype1"
[793] "subtype4" "subtype1" "subtype2" "subtype4" "subtype2" "subtype1"
[799] "subtype4" "subtype1" "subtype4" "subtype2" "subtype1" "subtype1"
[805] "subtype5" "subtype1" "subtype4" "subtype4" "subtype1" "subtype1"
[811] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[817] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype4"
[823] "subtype1" "subtype1" "subtype1" "subtype1"
D3V2, continuous
D3V3, binary
          cls
clus         0   1
  subtype1 331   0
  subtype2 199   8
  subtype3  64   1
  subtype4 231   0
  subtype5  51   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  331    0
  subtype2  199    8
  subtype3   64    1
  subtype4  231    0
  subtype5   51    0
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                           213                             76
  subtype2                           177                             21
  subtype3                            42                             17
  subtype4                           209                              3
  subtype5                            41                              4
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   0                               13
  subtype2                   0                                2
  subtype3                   0                                5
  subtype4                   3                                5
  subtype5                   1                                1
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  8             21
  subtype2                  1              6
  subtype3                  0              1
  subtype4                  0             11
  subtype5                  2              2
D3V4, multiclass
D3V5, binary
          cls
clus         0   1
  subtype1  70 261
  subtype2  45 162
  subtype3  19  46
  subtype4  64 167
  subtype5  14  37
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   70  261
  subtype2   45  162
  subtype3   19   46
  subtype4   64  167
  subtype5   14   37
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        1 283   4  43
  subtype2        0 188   4  15
  subtype3        0  61   2   2
  subtype4        0 206   5  20
  subtype5        1  43   0   7
D3V6, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N0 (MOL+) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3B
  subtype1 97      10      60         1 36  47  11   2   11 14  16  7  12   1
  subtype2 52       3      24         0 30  31   6   0    8 16  17  7   8   0
  subtype3 17       1       9         0  5  16   3   0    0  2   4  4   3   0
  subtype4 85       6      34         0 27  26   8   0    3 17  14  1   7   1
  subtype5 11       2       5         0  7  12   4   0    1  2   4  0   2   0
          vv
clus       N3C NX
  subtype1   0  6
  subtype2   0  5
  subtype3   0  1
  subtype4   1  1
  subtype5   0  1
D3V7, multiclass
D3V8, continuous
D3V9, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      38       37        3        5        98        70         1
  subtype2      11       11        2        1        71        45         1
  subtype3       3        1        0        1        21        20         0
  subtype4      16       15        1        1        89        54         0
  subtype5       4        3        0        0        21        10         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         43          8         17        4         0       7
  subtype2         37         12         11        4         0       1
  subtype3          8          3          4        2         0       2
  subtype4         32          3          9        5         1       4
  subtype5          9          0          2        0         0       2
D3V10, multiclass

Clustering(4) Variable = METHLYATION_CNMF
D4V1, survival
          sevent
clus2        0   1
  subtype1  79  13
  subtype2 123  13
  subtype3  79  13
  subtype4 101  12
  subtype5  32   2
  subtype6  73   8
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      92      136       92      113       34       81 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      13       13       13       12        2        8 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A0SX TCGA-A2-A0T0 
        8.52        31.79        28.01        19.17        42.35        11.08 
TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A2-A3XX 
        7.96         8.28        10.72        21.73        12.20        38.40 
TCGA-A2-A3Y0 TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I 
       28.21         8.78         9.44         8.45         6.87         4.01 
TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AC-A2QJ TCGA-AN-A0XU TCGA-AO-A0JB TCGA-AO-A0JL 
       38.53         1.02         2.27         0.33        37.81        43.36 
TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A1KO TCGA-AO-A1KR TCGA-AR-A0TP TCGA-AR-A0TU 
      102.54        96.10        14.73        70.36        78.64        11.84 
TCGA-AR-A0U0 TCGA-AR-A0U4 TCGA-AR-A1AI TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY 
        0.26        53.49        61.84        43.04        17.19        20.19 
TCGA-AR-A24Q TCGA-AR-A24S TCGA-AR-A251 TCGA-AR-A256 TCGA-AR-A2LR TCGA-B6-A0I1 
       66.02        62.07        45.14        93.83        20.38        77.62 
TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RU TCGA-B6-A0WX TCGA-B6-A0X1 TCGA-B6-A1KF 
      211.53       100.67       131.21        21.47       186.44       101.52 
TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0BT TCGA-BH-A0E0 TCGA-BH-A0H9 TCGA-BH-A0WA 
       39.55        51.68        45.57         4.37        41.00        12.23 
TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FN TCGA-BH-A208 TCGA-C8-A1HJ TCGA-C8-A26Y 
       97.48       114.12        72.07        57.83         0.16         0.43 
TCGA-C8-A27B TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1JM 
        0.99         3.16         6.15         3.58         8.71         7.82 
TCGA-D8-A1XK TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW TCGA-D8-A27F TCGA-D8-A27H 
       10.72         5.82         6.35         3.85         7.46         4.60 
TCGA-E2-A14N TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI 
       44.38        64.57        41.79        11.51        94.52        90.41 
TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1RB TCGA-E9-A1RH TCGA-E9-A244 
        8.75        33.34         7.86         0.69         0.46         0.66 
TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PH TCGA-GI-A2C9 
       15.22        16.47         7.86        19.99         4.57        23.11 
TCGA-GM-A2DB TCGA-GM-A3XL 
       53.10        56.45 

$subtype2
TCGA-A1-A0SE TCGA-A1-A0SH TCGA-A1-A0SI TCGA-A2-A0CO TCGA-A2-A0EU TCGA-A2-A0T5 
       43.40        47.24        20.84       112.04        24.10        10.55 
TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YL TCGA-A2-A1G0 TCGA-A2-A25A 
       21.14        18.08         9.50         8.81        12.49        97.58 
TCGA-A2-A25C TCGA-A2-A3KD TCGA-A7-A13H TCGA-A7-A26E TCGA-A7-A3IZ TCGA-A7-A3J0 
        9.37        26.40        18.12        13.84         4.87         2.50 
TCGA-A7-A3J1 TCGA-A7-A3RF TCGA-A8-A0AD TCGA-AC-A23E TCGA-AC-A2FG TCGA-AC-A2QI 
        2.47         1.78        38.04         2.37        36.99         0.92 
TCGA-AC-A3HN TCGA-AC-A3QP TCGA-AC-A3TN TCGA-AC-A3YJ TCGA-AN-A0XL TCGA-AN-A0XP 
        0.69         9.40         1.12         1.28         0.33         0.30 
TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AO-A03N TCGA-AO-A0JF TCGA-AO-A0JJ TCGA-AO-A125 
        0.33         0.33        54.08        11.64        49.71        99.22 
TCGA-AO-A126 TCGA-AO-A12B TCGA-AQ-A1H3 TCGA-AR-A0TR TCGA-AR-A1AK TCGA-AR-A1AL 
       93.70        77.56         5.33         5.26        51.22        48.82 
TCGA-AR-A1AN TCGA-AR-A1AS TCGA-AR-A24M TCGA-AR-A24P TCGA-AR-A24X TCGA-AR-A2LE 
       43.69        40.83        65.42         0.85        48.16       128.65 
TCGA-AR-A2LM TCGA-AR-A2LN TCGA-B6-A0RI TCGA-B6-A0RM TCGA-B6-A0RP TCGA-B6-A0WZ 
       40.01        17.06       223.40        78.02       102.77       129.57 
TCGA-B6-A0X4 TCGA-B6-A0X7 TCGA-B6-A1KI TCGA-B6-A2IU TCGA-BH-A0AZ TCGA-BH-A0B5 
       28.24        58.88        48.10       159.12        28.50        48.36 
TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BS TCGA-BH-A0DP 
       37.22        32.02        21.70        36.72        53.92        15.65 
TCGA-BH-A0E1 TCGA-BH-A0H6 TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HN TCGA-BH-A0HP 
       15.68        24.56        23.90        20.35        16.96        13.61 
TCGA-BH-A0W3 TCGA-BH-A0W4 TCGA-BH-A1ET TCGA-BH-A1EX TCGA-BH-A1F5 TCGA-BH-A1FG 
        5.92         5.75        82.85        49.58        89.16       122.89 
TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FR TCGA-BH-A28Q TCGA-D8-A1JD TCGA-D8-A1JE 
       63.35        55.00       144.59         6.44         8.98         1.87 
TCGA-D8-A1JI TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1JU TCGA-D8-A1X6 TCGA-D8-A1X7 
        0.69         3.45         4.04         3.48         7.76         2.79 
TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS 
        8.94         6.61         2.66         7.96         5.52         1.64 
TCGA-D8-A1XV TCGA-D8-A27E TCGA-D8-A27K TCGA-D8-A27P TCGA-D8-A27T TCGA-D8-A27V 
        4.80         5.98         3.88         0.76         4.44         2.40 
TCGA-E2-A107 TCGA-E2-A10B TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A15I TCGA-E2-A15J 
       25.08        24.59        13.74        11.84        13.51        15.22 
TCGA-E2-A1B4 TCGA-E2-A1BC TCGA-E2-A1IF TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO 
       29.95         9.76        31.43         0.46        12.89        14.73 
TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E9-A1R3 TCGA-E9-A1RD 
        4.18        43.13        33.37        12.76         2.10         0.66 
TCGA-E9-A1RI TCGA-E9-A226 TCGA-E9-A227 TCGA-E9-A245 TCGA-E9-A249 TCGA-E9-A24A 
        1.58         0.53         0.79         0.82         0.92         0.33 
TCGA-E9-A3HO TCGA-EW-A1IX TCGA-EW-A1J2 TCGA-EW-A1J3 TCGA-EW-A1P0 TCGA-EW-A1P3 
        0.62        35.57         4.57         8.28        36.85        32.45 
TCGA-EW-A1P5 TCGA-EW-A1PE TCGA-GM-A2D9 TCGA-LL-A442 
       12.00         3.48        59.57         3.58 

$subtype3
TCGA-A1-A0SF TCGA-A1-A0SN TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0SY TCGA-A2-A0T4 
       48.10        39.32        27.12        44.84        37.94        12.99 
TCGA-A2-A0T6 TCGA-A2-A25D TCGA-A2-A3KC TCGA-A2-A3XV TCGA-A7-A13F TCGA-A7-A26H 
       11.31         7.99        11.93        14.07         6.44         2.10 
TCGA-A8-A0A6 TCGA-AC-A23C TCGA-AC-A2B8 TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XV 
       21.04         0.95         1.45         0.33        12.33         5.33 
TCGA-AO-A0JE TCGA-AO-A0JM TCGA-AO-A12E TCGA-AO-A12G TCGA-AO-A1KT TCGA-AQ-A04H 
       64.60        60.03        57.27        41.59        17.79        14.43 
TCGA-AQ-A04L TCGA-AQ-A0Y5 TCGA-AQ-A1H2 TCGA-AR-A0TV TCGA-AR-A0TZ TCGA-AR-A1AP 
      110.43         5.62         7.56        29.72        43.17        39.95 
TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A24H TCGA-AR-A24K TCGA-AR-A24N TCGA-AR-A24R 
       41.82        42.58       109.58        50.89        68.19        57.37 
TCGA-AR-A24T TCGA-AR-A250 TCGA-AR-A255 TCGA-AR-A2LK TCGA-AR-A2LL TCGA-B6-A0RL 
       53.26        56.12        34.78        42.84         7.33        81.17 
TCGA-B6-A0RN TCGA-B6-A0WW TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0DS 
      172.96        17.95        45.80        38.01        13.91         2.53 
TCGA-BH-A0HK TCGA-BH-A0HY TCGA-BH-A1EN TCGA-BH-A1EV TCGA-BH-A1EW TCGA-BH-A1EY 
        5.85        28.50        67.46        12.00        55.69        17.69 
TCGA-BH-A1FD TCGA-BH-A202 TCGA-BH-A203 TCGA-C8-A26V TCGA-C8-A274 TCGA-C8-A275 
       33.14         0.72        38.60         0.30         0.03         0.03 
TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1XA 
        8.42         8.15         0.59         9.01         7.13         9.01 
TCGA-D8-A1XJ TCGA-D8-A1XU TCGA-D8-A1XZ TCGA-D8-A1Y1 TCGA-D8-A1Y3 TCGA-D8-A27G 
       11.57         4.90         3.95         3.78         4.08         6.87 
TCGA-D8-A27N TCGA-E2-A1BD TCGA-E2-A1L7 TCGA-E2-A1LE TCGA-E2-A2P5 TCGA-E2-A2P6 
        4.77        10.42        20.81        28.90        10.72         5.49 
TCGA-E9-A1R5 TCGA-E9-A1RC TCGA-E9-A247 TCGA-E9-A2JS TCGA-EW-A1IW TCGA-EW-A1J5 
        1.38        40.37         0.39         0.43         8.28         7.46 
TCGA-EW-A1OZ TCGA-EW-A1PC TCGA-EW-A1PD TCGA-EW-A3E8 TCGA-GI-A2C8 TCGA-GM-A2DL 
       30.94         6.12         5.72        21.27         6.97        90.81 
TCGA-GM-A3NW TCGA-GM-A3NY 
       98.04        24.43 

$subtype4
TCGA-A1-A0SG TCGA-A1-A0SJ TCGA-A1-A0SQ TCGA-A2-A04R TCGA-A2-A0CT TCGA-A2-A0T7 
       14.24        14.01        18.18        77.72        63.02        13.05 
TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW TCGA-A2-A1FX 
       13.28        12.46        23.77        15.12         7.27        30.74 
TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25E TCGA-A7-A0D9 TCGA-A7-A26J TCGA-A7-A2KD 
       12.23         8.48        82.55         5.23         2.20         5.95 
TCGA-A8-A075 TCGA-A8-A08O TCGA-AC-A23H TCGA-AC-A2BM TCGA-AC-A2FM TCGA-AN-A0XT 
       17.00        30.97         2.66        38.20        26.04         0.33 
TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A0JA TCGA-AO-A0JD TCGA-AO-A0JG TCGA-AO-A0JI 
       80.28        47.84        11.38        59.61        14.76        38.53 
TCGA-AO-A12C TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AR-A0TQ TCGA-AR-A0TW 
       65.52        82.62        49.94         0.53        49.32        24.30 
TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A24L TCGA-AR-A24V TCGA-AR-A24Z TCGA-B6-A0RG 
       83.87        74.40        73.02        54.18        51.75        68.45 
TCGA-B6-A0RO TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WY TCGA-B6-A0X5 TCGA-B6-A1KC 
      162.02       177.40        79.63       113.75        68.94        43.59 
TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0AW TCGA-BH-A0B8 TCGA-BH-A0BZ TCGA-BH-A0DQ 
      109.48        24.53        20.45        51.58        49.05         3.22 
TCGA-BH-A0E2 TCGA-BH-A0GY TCGA-BH-A0H0 TCGA-BH-A0H7 TCGA-BH-A0HA TCGA-BH-A0HB 
       12.36        30.15        15.16        23.05        28.14        26.50 
TCGA-BH-A0HX TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1F2 TCGA-BH-A1F8 TCGA-BH-A1FM 
       27.25        91.99       113.82        31.53        24.62        45.63 
TCGA-BH-A204 TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A1HN TCGA-C8-A26W 
       83.31         0.23         0.07         0.20         0.07         0.23 
TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A27A TCGA-C8-A3M8 TCGA-D8-A1JC TCGA-D8-A1X5 
        0.13         0.20        12.20         0.23         5.85         5.62 
TCGA-D8-A1X9 TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XY TCGA-D8-A1Y0 TCGA-D8-A27R 
       12.49         5.10         6.48         2.66         5.46         2.96 
TCGA-D8-A27W TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10C TCGA-E2-A15K 
        0.49        38.24        51.12        38.53        28.04         1.12 
TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IH TCGA-E2-A1LA TCGA-E9-A1R6 TCGA-E9-A1R7 
       32.32        24.82        21.63        15.22         2.76         1.12 
TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A295 TCGA-EW-A1J1 TCGA-EW-A1J6 
        1.55         1.25         1.15         0.69         9.27        19.56 
TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1P6 TCGA-EW-A1PA TCGA-EW-A1PF TCGA-EW-A2FS 
       18.48        19.50        10.26         8.78         4.57        38.56 
TCGA-EW-A2FV TCGA-EW-A2FW TCGA-GM-A2DA TCGA-GM-A2DC TCGA-GM-A2DK 
        7.82         6.25       194.27        53.52        62.33 

$subtype5
TCGA-A1-A0SM TCGA-A2-A0CK TCGA-A2-A0SU TCGA-A2-A1FZ TCGA-A2-A1G6 TCGA-A2-A259 
        7.96       125.56        44.42        13.45         4.34        42.25 
TCGA-A7-A13G TCGA-AC-A2FK TCGA-AR-A1AU TCGA-AR-A24W TCGA-AR-A254 TCGA-B6-A0IK 
        6.84        38.79        46.32        50.96        39.85        18.77 
TCGA-B6-A0RV TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0GZ TCGA-BH-A0H3 TCGA-BH-A1FH 
      157.41        23.44        22.13        10.78        37.78        36.92 
TCGA-BH-A201 TCGA-BH-A28O TCGA-C8-A1HI TCGA-D8-A1JH TCGA-D8-A1JP TCGA-D8-A1XG 
        6.87        10.62         0.07         9.34         5.49         6.44 
TCGA-D8-A1XL TCGA-D8-A1XM TCGA-E2-A14U TCGA-E2-A1LB TCGA-E9-A1R2 TCGA-EW-A1IY 
       10.49         7.17        27.55        31.96         0.62         8.48 
TCGA-EW-A2FR TCGA-GM-A2DM TCGA-GM-A3XG TCGA-GM-A3XN 
       36.82        76.64        32.25        53.92 

$subtype6
TCGA-A2-A0EN TCGA-A2-A0ST TCGA-A2-A0T1 TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A25F 
       82.68        54.02        10.59        11.77        10.98         3.72 
TCGA-A2-A3XZ TCGA-A7-A3IY TCGA-AC-A23G TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FO 
       31.96         4.96        10.82         1.45        55.40        50.70 
TCGA-AC-A3BB TCGA-AC-A3OD TCGA-AC-A3W6 TCGA-AC-A3YI TCGA-AN-A0XW TCGA-AO-A03U 
        0.99         1.15         1.68         1.51         5.59        59.05 
TCGA-AO-A0JC TCGA-AO-A128 TCGA-AR-A0TT TCGA-AR-A0TX TCGA-AR-A1AJ TCGA-AR-A1AO 
       50.86        94.59        55.20         0.49        52.73        43.53 
TCGA-AR-A1AW TCGA-AR-A1AX TCGA-AR-A24O TCGA-AR-A24U TCGA-AR-A252 TCGA-AR-A2LH 
       35.24        36.26        65.65        53.36        40.64        20.22 
TCGA-AR-A2LO TCGA-AR-A2LQ TCGA-B6-A0RT TCGA-BH-A0B6 TCGA-BH-A0BF TCGA-BH-A0C0 
       20.81        16.96        89.46        56.94        25.68        41.75 
TCGA-BH-A0C3 TCGA-BH-A0DV TCGA-BH-A0RX TCGA-BH-A0W5 TCGA-BH-A1EU TCGA-BH-A1F0 
       48.13        45.17         5.59        17.85        42.28        25.81 
TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FU TCGA-BH-A209 TCGA-C8-A26X TCGA-C8-A278 
      120.62        74.73        72.07       130.16         0.36         0.03 
TCGA-C8-A3M7 TCGA-D8-A1Y2 TCGA-D8-A27I TCGA-D8-A27L TCGA-D8-A27M TCGA-E2-A108 
        0.03         2.37         6.08         4.11         4.73         4.08 
TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1B6 TCGA-E2-A1II TCGA-E2-A1IJ TCGA-E2-A1IK 
       44.75        25.45        11.11        27.95        23.84        17.03 
TCGA-E2-A3DX TCGA-E9-A1R4 TCGA-E9-A1RA TCGA-E9-A243 TCGA-E9-A248 TCGA-E9-A2JT 
        7.13         0.95         0.95         1.41         0.69         0.76 
TCGA-E9-A3X8 TCGA-EW-A1IZ TCGA-EW-A1OV TCGA-EW-A1P1 TCGA-EW-A1P7 TCGA-EW-A1PG 
        0.76         8.55        17.16        30.21        20.88        28.77 
TCGA-EW-A3U0 TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DH TCGA-GM-A2DI TCGA-GM-A2DN 
        7.53        43.04        42.71        42.28        61.91        77.33 
TCGA-GM-A2DO TCGA-LL-A440 TCGA-LL-A441 
       53.33         0.66         2.99 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
    0.16     0.30     0.03     0.07     0.07     0.03 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  211.53   223.40   172.96   194.27   157.41   130.16 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  20.090   13.675   13.990   19.560   22.785   20.880 
[1] "0.2 - 211.5 (20.1)" "0.3 - 223.4 (13.7)" "0.0 - 173.0 (14.0)"
[4] "0.1 - 194.3 (19.6)" "0.1 - 157.4 (22.8)" "0.0 - 130.2 (20.9)"
  [1] "subtype1" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
  [7] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype1"
 [13] "subtype4" "subtype4" "subtype5" "subtype2" "subtype4" "subtype6"
 [19] "subtype2" "subtype6" "subtype5" "subtype3" "subtype3" "subtype1"
 [25] "subtype3" "subtype1" "subtype6" "subtype1" "subtype3" "subtype2"
 [31] "subtype3" "subtype4" "subtype2" "subtype2" "subtype1" "subtype2"
 [37] "subtype4" "subtype4" "subtype6" "subtype1" "subtype6" "subtype2"
 [43] "subtype1" "subtype4" "subtype4" "subtype4" "subtype4" "subtype5"
 [49] "subtype2" "subtype1" "subtype4" "subtype5" "subtype5" "subtype2"
 [55] "subtype4" "subtype2" "subtype3" "subtype4" "subtype6" "subtype3"
 [61] "subtype2" "subtype3" "subtype1" "subtype6" "subtype1" "subtype4"
 [67] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype2"
 [73] "subtype1" "subtype1" "subtype3" "subtype1" "subtype4" "subtype4"
 [79] "subtype6" "subtype2" "subtype2" "subtype2" "subtype2" "subtype4"
 [85] "subtype4" "subtype3" "subtype2" "subtype3" "subtype2" "subtype6"
 [91] "subtype4" "subtype3" "subtype1" "subtype4" "subtype6" "subtype6"
 [97] "subtype2" "subtype5" "subtype4" "subtype6" "subtype1" "subtype2"
[103] "subtype1" "subtype6" "subtype2" "subtype6" "subtype2" "subtype2"
[109] "subtype6" "subtype6" "subtype2" "subtype2" "subtype3" "subtype3"
[115] "subtype2" "subtype2" "subtype2" "subtype4" "subtype1" "subtype3"
[121] "subtype6" "subtype4" "subtype4" "subtype2" "subtype6" "subtype4"
[127] "subtype1" "subtype6" "subtype4" "subtype3" "subtype2" "subtype4"
[133] "subtype4" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[139] "subtype2" "subtype6" "subtype1" "subtype2" "subtype4" "subtype3"
[145] "subtype3" "subtype1" "subtype4" "subtype4" "subtype1" "subtype4"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[157] "subtype1" "subtype4" "subtype2" "subtype6" "subtype1" "subtype3"
[163] "subtype4" "subtype6" "subtype3" "subtype1" "subtype4" "subtype4"
[169] "subtype1" "subtype1" "subtype6" "subtype2" "subtype2" "subtype2"
[175] "subtype6" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[181] "subtype5" "subtype3" "subtype6" "subtype6" "subtype1" "subtype3"
[187] "subtype3" "subtype4" "subtype2" "subtype3" "subtype6" "subtype2"
[193] "subtype1" "subtype3" "subtype1" "subtype3" "subtype6" "subtype4"
[199] "subtype5" "subtype2" "subtype4" "subtype3" "subtype1" "subtype6"
[205] "subtype5" "subtype3" "subtype1" "subtype2" "subtype6" "subtype3"
[211] "subtype3" "subtype2" "subtype2" "subtype6" "subtype6" "subtype1"
[217] "subtype1" "subtype5" "subtype1" "subtype4" "subtype2" "subtype3"
[223] "subtype2" "subtype3" "subtype4" "subtype2" "subtype1" "subtype6"
[229] "subtype1" "subtype5" "subtype4" "subtype4" "subtype3" "subtype1"
[235] "subtype4" "subtype2" "subtype1" "subtype2" "subtype4" "subtype2"
[241] "subtype4" "subtype1" "subtype2" "subtype4" "subtype2" "subtype4"
[247] "subtype4" "subtype2" "subtype1" "subtype2" "subtype6" "subtype4"
[253] "subtype1" "subtype2" "subtype2" "subtype6" "subtype2" "subtype2"
[259] "subtype2" "subtype1" "subtype4" "subtype6" "subtype6" "subtype3"
[265] "subtype5" "subtype3" "subtype5" "subtype3" "subtype2" "subtype4"
[271] "subtype3" "subtype6" "subtype1" "subtype2" "subtype4" "subtype4"
[277] "subtype5" "subtype4" "subtype5" "subtype2" "subtype4" "subtype1"
[283] "subtype4" "subtype4" "subtype2" "subtype2" "subtype3" "subtype2"
[289] "subtype2" "subtype4" "subtype3" "subtype6" "subtype2" "subtype2"
[295] "subtype6" "subtype1" "subtype3" "subtype4" "subtype4" "subtype2"
[301] "subtype6" "subtype3" "subtype3" "subtype2" "subtype3" "subtype6"
[307] "subtype4" "subtype2" "subtype1" "subtype4" "subtype6" "subtype1"
[313] "subtype3" "subtype6" "subtype2" "subtype5" "subtype2" "subtype2"
[319] "subtype4" "subtype1" "subtype2" "subtype6" "subtype5" "subtype3"
[325] "subtype3" "subtype4" "subtype1" "subtype6" "subtype5" "subtype2"
[331] "subtype5" "subtype1" "subtype4" "subtype4" "subtype4" "subtype4"
[337] "subtype3" "subtype4" "subtype6" "subtype1" "subtype4" "subtype4"
[343] "subtype3" "subtype3" "subtype6" "subtype4" "subtype1" "subtype6"
[349] "subtype4" "subtype3" "subtype3" "subtype3" "subtype4" "subtype2"
[355] "subtype2" "subtype1" "subtype1" "subtype5" "subtype2" "subtype3"
[361] "subtype1" "subtype1" "subtype1" "subtype3" "subtype5" "subtype2"
[367] "subtype2" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[373] "subtype4" "subtype3" "subtype2" "subtype2" "subtype4" "subtype4"
[379] "subtype5" "subtype3" "subtype1" "subtype5" "subtype5" "subtype2"
[385] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[391] "subtype1" "subtype4" "subtype3" "subtype4" "subtype3" "subtype6"
[397] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype6"
[403] "subtype2" "subtype6" "subtype6" "subtype3" "subtype2" "subtype4"
[409] "subtype2" "subtype2" "subtype4" "subtype4" "subtype4" "subtype2"
[415] "subtype6" "subtype4" "subtype2" "subtype4" "subtype2" "subtype2"
[421] "subtype1" "subtype5" "subtype2" "subtype2" "subtype4" "subtype1"
[427] "subtype1" "subtype6" "subtype2" "subtype6" "subtype6" "subtype2"
[433] "subtype3" "subtype4" "subtype2" "subtype4" "subtype4" "subtype6"
[439] "subtype6" "subtype6" "subtype2" "subtype2" "subtype2" "subtype2"
[445] "subtype2" "subtype3" "subtype2" "subtype2" "subtype4" "subtype5"
[451] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[457] "subtype1" "subtype3" "subtype3" "subtype6" "subtype5" "subtype2"
[463] "subtype6" "subtype3" "subtype4" "subtype4" "subtype6" "subtype1"
[469] "subtype3" "subtype2" "subtype4" "subtype4" "subtype4" "subtype1"
[475] "subtype2" "subtype2" "subtype2" "subtype6" "subtype1" "subtype2"
[481] "subtype3" "subtype6" "subtype2" "subtype2" "subtype4" "subtype3"
[487] "subtype6" "subtype2" "subtype6" "subtype3" "subtype2" "subtype5"
[493] "subtype6" "subtype4" "subtype2" "subtype2" "subtype3" "subtype4"
[499] "subtype6" "subtype1" "subtype4" "subtype4" "subtype3" "subtype2"
[505] "subtype6" "subtype2" "subtype1" "subtype2" "subtype4" "subtype6"
[511] "subtype1" "subtype4" "subtype1" "subtype3" "subtype3" "subtype2"
[517] "subtype4" "subtype6" "subtype1" "subtype5" "subtype4" "subtype4"
[523] "subtype4" "subtype3" "subtype6" "subtype3" "subtype1" "subtype2"
[529] "subtype4" "subtype1" "subtype4" "subtype6" "subtype6" "subtype6"
[535] "subtype6" "subtype4" "subtype3" "subtype5" "subtype6" "subtype6"
[541] "subtype3" "subtype3" "subtype5" "subtype1" "subtype5" "subtype6"
[547] "subtype6" "subtype2"
  [1] "subtype1" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
  [7] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype1"
 [13] "subtype4" "subtype4" "subtype5" "subtype2" "subtype4" "subtype6"
 [19] "subtype2" "subtype6" "subtype5" "subtype3" "subtype3" "subtype1"
 [25] "subtype3" "subtype1" "subtype6" "subtype1" "subtype3" "subtype2"
 [31] "subtype3" "subtype4" "subtype2" "subtype2" "subtype1" "subtype2"
 [37] "subtype4" "subtype4" "subtype6" "subtype1" "subtype6" "subtype2"
 [43] "subtype1" "subtype4" "subtype4" "subtype4" "subtype4" "subtype5"
 [49] "subtype2" "subtype1" "subtype4" "subtype5" "subtype5" "subtype2"
 [55] "subtype4" "subtype2" "subtype3" "subtype4" "subtype6" "subtype3"
 [61] "subtype2" "subtype3" "subtype1" "subtype6" "subtype1" "subtype4"
 [67] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype2"
 [73] "subtype1" "subtype1" "subtype3" "subtype1" "subtype4" "subtype4"
 [79] "subtype6" "subtype2" "subtype2" "subtype2" "subtype2" "subtype4"
 [85] "subtype4" "subtype3" "subtype2" "subtype3" "subtype2" "subtype6"
 [91] "subtype4" "subtype3" "subtype1" "subtype4" "subtype6" "subtype6"
 [97] "subtype2" "subtype5" "subtype4" "subtype6" "subtype1" "subtype2"
[103] "subtype1" "subtype6" "subtype2" "subtype6" "subtype2" "subtype2"
[109] "subtype6" "subtype6" "subtype2" "subtype2" "subtype3" "subtype3"
[115] "subtype2" "subtype2" "subtype2" "subtype4" "subtype1" "subtype3"
[121] "subtype6" "subtype4" "subtype4" "subtype2" "subtype6" "subtype4"
[127] "subtype1" "subtype6" "subtype4" "subtype3" "subtype2" "subtype4"
[133] "subtype4" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[139] "subtype2" "subtype6" "subtype1" "subtype2" "subtype4" "subtype3"
[145] "subtype3" "subtype1" "subtype4" "subtype4" "subtype1" "subtype4"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[157] "subtype1" "subtype4" "subtype2" "subtype6" "subtype1" "subtype3"
[163] "subtype4" "subtype6" "subtype3" "subtype1" "subtype4" "subtype4"
[169] "subtype1" "subtype1" "subtype6" "subtype2" "subtype2" "subtype2"
[175] "subtype6" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[181] "subtype5" "subtype3" "subtype6" "subtype6" "subtype1" "subtype3"
[187] "subtype3" "subtype4" "subtype2" "subtype3" "subtype6" "subtype2"
[193] "subtype1" "subtype3" "subtype1" "subtype3" "subtype6" "subtype4"
[199] "subtype5" "subtype2" "subtype4" "subtype3" "subtype1" "subtype6"
[205] "subtype5" "subtype3" "subtype1" "subtype2" "subtype6" "subtype3"
[211] "subtype3" "subtype2" "subtype2" "subtype6" "subtype6" "subtype1"
[217] "subtype1" "subtype5" "subtype1" "subtype4" "subtype2" "subtype3"
[223] "subtype2" "subtype3" "subtype4" "subtype2" "subtype1" "subtype6"
[229] "subtype1" "subtype5" "subtype4" "subtype4" "subtype3" "subtype1"
[235] "subtype4" "subtype2" "subtype1" "subtype2" "subtype4" "subtype2"
[241] "subtype4" "subtype1" "subtype2" "subtype4" "subtype2" "subtype4"
[247] "subtype4" "subtype2" "subtype1" "subtype2" "subtype6" "subtype4"
[253] "subtype1" "subtype2" "subtype2" "subtype6" "subtype2" "subtype2"
[259] "subtype2" "subtype1" "subtype4" "subtype6" "subtype6" "subtype3"
[265] "subtype5" "subtype3" "subtype5" "subtype3" "subtype2" "subtype4"
[271] "subtype3" "subtype6" "subtype1" "subtype2" "subtype4" "subtype4"
[277] "subtype5" "subtype4" "subtype5" "subtype2" "subtype4" "subtype1"
[283] "subtype4" "subtype4" "subtype2" "subtype2" "subtype3" "subtype2"
[289] "subtype2" "subtype4" "subtype3" "subtype6" "subtype2" "subtype2"
[295] "subtype6" "subtype1" "subtype3" "subtype4" "subtype4" "subtype2"
[301] "subtype6" "subtype3" "subtype3" "subtype2" "subtype3" "subtype6"
[307] "subtype4" "subtype2" "subtype1" "subtype4" "subtype6" "subtype1"
[313] "subtype3" "subtype6" "subtype2" "subtype5" "subtype2" "subtype2"
[319] "subtype4" "subtype1" "subtype2" "subtype6" "subtype5" "subtype3"
[325] "subtype3" "subtype4" "subtype1" "subtype6" "subtype5" "subtype2"
[331] "subtype5" "subtype1" "subtype4" "subtype4" "subtype4" "subtype4"
[337] "subtype3" "subtype4" "subtype6" "subtype1" "subtype4" "subtype4"
[343] "subtype3" "subtype3" "subtype6" "subtype4" "subtype1" "subtype6"
[349] "subtype4" "subtype3" "subtype3" "subtype3" "subtype4" "subtype2"
[355] "subtype2" "subtype1" "subtype1" "subtype5" "subtype2" "subtype3"
[361] "subtype1" "subtype1" "subtype1" "subtype3" "subtype5" "subtype2"
[367] "subtype2" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[373] "subtype4" "subtype3" "subtype2" "subtype2" "subtype4" "subtype4"
[379] "subtype5" "subtype3" "subtype1" "subtype5" "subtype5" "subtype2"
[385] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[391] "subtype1" "subtype4" "subtype3" "subtype4" "subtype3" "subtype6"
[397] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype6"
[403] "subtype2" "subtype6" "subtype6" "subtype3" "subtype2" "subtype4"
[409] "subtype2" "subtype2" "subtype4" "subtype4" "subtype4" "subtype2"
[415] "subtype6" "subtype4" "subtype2" "subtype4" "subtype2" "subtype2"
[421] "subtype1" "subtype5" "subtype2" "subtype2" "subtype4" "subtype1"
[427] "subtype1" "subtype6" "subtype2" "subtype6" "subtype6" "subtype2"
[433] "subtype3" "subtype4" "subtype2" "subtype4" "subtype4" "subtype6"
[439] "subtype6" "subtype6" "subtype2" "subtype2" "subtype2" "subtype2"
[445] "subtype2" "subtype3" "subtype2" "subtype2" "subtype4" "subtype5"
[451] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[457] "subtype1" "subtype3" "subtype3" "subtype6" "subtype5" "subtype2"
[463] "subtype6" "subtype3" "subtype4" "subtype4" "subtype6" "subtype1"
[469] "subtype3" "subtype2" "subtype4" "subtype4" "subtype4" "subtype1"
[475] "subtype2" "subtype2" "subtype2" "subtype6" "subtype1" "subtype2"
[481] "subtype3" "subtype6" "subtype2" "subtype2" "subtype4" "subtype3"
[487] "subtype6" "subtype2" "subtype6" "subtype3" "subtype2" "subtype5"
[493] "subtype6" "subtype4" "subtype2" "subtype2" "subtype3" "subtype4"
[499] "subtype6" "subtype1" "subtype4" "subtype4" "subtype3" "subtype2"
[505] "subtype6" "subtype2" "subtype1" "subtype2" "subtype4" "subtype6"
[511] "subtype1" "subtype4" "subtype1" "subtype3" "subtype3" "subtype2"
[517] "subtype4" "subtype6" "subtype1" "subtype5" "subtype4" "subtype4"
[523] "subtype4" "subtype3" "subtype6" "subtype3" "subtype1" "subtype2"
[529] "subtype4" "subtype1" "subtype4" "subtype6" "subtype6" "subtype6"
[535] "subtype6" "subtype4" "subtype3" "subtype5" "subtype6" "subtype6"
[541] "subtype3" "subtype3" "subtype5" "subtype1" "subtype5" "subtype6"
[547] "subtype6" "subtype2"
  [1] "subtype1" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
  [7] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype1"
 [13] "subtype4" "subtype4" "subtype5" "subtype2" "subtype4" "subtype6"
 [19] "subtype2" "subtype6" "subtype5" "subtype3" "subtype3" "subtype1"
 [25] "subtype3" "subtype1" "subtype6" "subtype1" "subtype3" "subtype2"
 [31] "subtype3" "subtype4" "subtype2" "subtype2" "subtype1" "subtype2"
 [37] "subtype4" "subtype4" "subtype6" "subtype1" "subtype6" "subtype2"
 [43] "subtype1" "subtype4" "subtype4" "subtype4" "subtype4" "subtype5"
 [49] "subtype2" "subtype1" "subtype4" "subtype5" "subtype5" "subtype2"
 [55] "subtype4" "subtype2" "subtype3" "subtype4" "subtype6" "subtype3"
 [61] "subtype2" "subtype3" "subtype1" "subtype6" "subtype1" "subtype4"
 [67] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype2"
 [73] "subtype1" "subtype1" "subtype3" "subtype1" "subtype4" "subtype4"
 [79] "subtype6" "subtype2" "subtype2" "subtype2" "subtype2" "subtype4"
 [85] "subtype4" "subtype3" "subtype2" "subtype3" "subtype2" "subtype6"
 [91] "subtype4" "subtype3" "subtype1" "subtype4" "subtype6" "subtype6"
 [97] "subtype2" "subtype5" "subtype4" "subtype6" "subtype1" "subtype2"
[103] "subtype1" "subtype6" "subtype2" "subtype6" "subtype2" "subtype2"
[109] "subtype6" "subtype6" "subtype2" "subtype2" "subtype3" "subtype3"
[115] "subtype2" "subtype2" "subtype2" "subtype4" "subtype1" "subtype3"
[121] "subtype6" "subtype4" "subtype4" "subtype2" "subtype6" "subtype4"
[127] "subtype1" "subtype6" "subtype4" "subtype3" "subtype2" "subtype4"
[133] "subtype4" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[139] "subtype2" "subtype6" "subtype1" "subtype2" "subtype4" "subtype3"
[145] "subtype3" "subtype1" "subtype4" "subtype4" "subtype1" "subtype4"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[157] "subtype1" "subtype4" "subtype2" "subtype6" "subtype1" "subtype3"
[163] "subtype4" "subtype6" "subtype3" "subtype1" "subtype4" "subtype4"
[169] "subtype1" "subtype1" "subtype6" "subtype2" "subtype2" "subtype2"
[175] "subtype6" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[181] "subtype5" "subtype3" "subtype6" "subtype6" "subtype1" "subtype3"
[187] "subtype3" "subtype4" "subtype2" "subtype3" "subtype6" "subtype2"
[193] "subtype1" "subtype3" "subtype1" "subtype3" "subtype6" "subtype4"
[199] "subtype5" "subtype2" "subtype4" "subtype3" "subtype1" "subtype6"
[205] "subtype5" "subtype3" "subtype1" "subtype2" "subtype6" "subtype3"
[211] "subtype3" "subtype2" "subtype2" "subtype6" "subtype6" "subtype1"
[217] "subtype1" "subtype5" "subtype1" "subtype4" "subtype2" "subtype3"
[223] "subtype2" "subtype3" "subtype4" "subtype2" "subtype1" "subtype6"
[229] "subtype1" "subtype5" "subtype4" "subtype4" "subtype3" "subtype1"
[235] "subtype4" "subtype2" "subtype1" "subtype2" "subtype4" "subtype2"
[241] "subtype4" "subtype1" "subtype2" "subtype4" "subtype2" "subtype4"
[247] "subtype4" "subtype2" "subtype1" "subtype2" "subtype6" "subtype4"
[253] "subtype1" "subtype2" "subtype2" "subtype6" "subtype2" "subtype2"
[259] "subtype2" "subtype1" "subtype4" "subtype6" "subtype6" "subtype3"
[265] "subtype5" "subtype3" "subtype5" "subtype3" "subtype2" "subtype4"
[271] "subtype3" "subtype6" "subtype1" "subtype2" "subtype4" "subtype4"
[277] "subtype5" "subtype4" "subtype5" "subtype2" "subtype4" "subtype1"
[283] "subtype4" "subtype4" "subtype2" "subtype2" "subtype3" "subtype2"
[289] "subtype2" "subtype4" "subtype3" "subtype6" "subtype2" "subtype2"
[295] "subtype6" "subtype1" "subtype3" "subtype4" "subtype4" "subtype2"
[301] "subtype6" "subtype3" "subtype3" "subtype2" "subtype3" "subtype6"
[307] "subtype4" "subtype2" "subtype1" "subtype4" "subtype6" "subtype1"
[313] "subtype3" "subtype6" "subtype2" "subtype5" "subtype2" "subtype2"
[319] "subtype4" "subtype1" "subtype2" "subtype6" "subtype5" "subtype3"
[325] "subtype3" "subtype4" "subtype1" "subtype6" "subtype5" "subtype2"
[331] "subtype5" "subtype1" "subtype4" "subtype4" "subtype4" "subtype4"
[337] "subtype3" "subtype4" "subtype6" "subtype1" "subtype4" "subtype4"
[343] "subtype3" "subtype3" "subtype6" "subtype4" "subtype1" "subtype6"
[349] "subtype4" "subtype3" "subtype3" "subtype3" "subtype4" "subtype2"
[355] "subtype2" "subtype1" "subtype1" "subtype5" "subtype2" "subtype3"
[361] "subtype1" "subtype1" "subtype1" "subtype3" "subtype5" "subtype2"
[367] "subtype2" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[373] "subtype4" "subtype3" "subtype2" "subtype2" "subtype4" "subtype4"
[379] "subtype5" "subtype3" "subtype1" "subtype5" "subtype5" "subtype2"
[385] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[391] "subtype1" "subtype4" "subtype3" "subtype4" "subtype3" "subtype6"
[397] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype6"
[403] "subtype2" "subtype6" "subtype6" "subtype3" "subtype2" "subtype4"
[409] "subtype2" "subtype2" "subtype4" "subtype4" "subtype4" "subtype2"
[415] "subtype6" "subtype4" "subtype2" "subtype4" "subtype2" "subtype2"
[421] "subtype1" "subtype5" "subtype2" "subtype2" "subtype4" "subtype1"
[427] "subtype1" "subtype6" "subtype2" "subtype6" "subtype6" "subtype2"
[433] "subtype3" "subtype4" "subtype2" "subtype4" "subtype4" "subtype6"
[439] "subtype6" "subtype6" "subtype2" "subtype2" "subtype2" "subtype2"
[445] "subtype2" "subtype3" "subtype2" "subtype2" "subtype4" "subtype5"
[451] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[457] "subtype1" "subtype3" "subtype3" "subtype6" "subtype5" "subtype2"
[463] "subtype6" "subtype3" "subtype4" "subtype4" "subtype6" "subtype1"
[469] "subtype3" "subtype2" "subtype4" "subtype4" "subtype4" "subtype1"
[475] "subtype2" "subtype2" "subtype2" "subtype6" "subtype1" "subtype2"
[481] "subtype3" "subtype6" "subtype2" "subtype2" "subtype4" "subtype3"
[487] "subtype6" "subtype2" "subtype6" "subtype3" "subtype2" "subtype5"
[493] "subtype6" "subtype4" "subtype2" "subtype2" "subtype3" "subtype4"
[499] "subtype6" "subtype1" "subtype4" "subtype4" "subtype3" "subtype2"
[505] "subtype6" "subtype2" "subtype1" "subtype2" "subtype4" "subtype6"
[511] "subtype1" "subtype4" "subtype1" "subtype3" "subtype3" "subtype2"
[517] "subtype4" "subtype6" "subtype1" "subtype5" "subtype4" "subtype4"
[523] "subtype4" "subtype3" "subtype6" "subtype3" "subtype1" "subtype2"
[529] "subtype4" "subtype1" "subtype4" "subtype6" "subtype6" "subtype6"
[535] "subtype6" "subtype4" "subtype3" "subtype5" "subtype6" "subtype6"
[541] "subtype3" "subtype3" "subtype5" "subtype1" "subtype5" "subtype6"
[547] "subtype6" "subtype2"
D4V2, continuous
D4V3, binary
          cls
clus         0   1
  subtype1  97   0
  subtype2 143   1
  subtype3  91   3
  subtype4 119   1
  subtype5  35   1
  subtype6  86   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   97    0
  subtype2  143    1
  subtype3   91    3
  subtype4  119    1
  subtype5   35    1
  subtype6   86    0
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                            81                              2
  subtype2                            83                             35
  subtype3                            66                             23
  subtype4                           103                              6
  subtype5                            29                              6
  subtype6                            58                             23
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   3                                1
  subtype2                   0                               12
  subtype3                   0                                3
  subtype4                   0                                3
  subtype5                   0                                1
  subtype6                   1                                2
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  0             10
  subtype2                  5              9
  subtype3                  0              2
  subtype4                  2              6
  subtype5                  0              0
  subtype6                  1              1
D4V4, multiclass
D4V5, binary
          cls
clus         0   1
  subtype1  31  66
  subtype2  35 109
  subtype3  20  74
  subtype4  37  83
  subtype5   6  30
  subtype6  18  68
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   31   66
  subtype2   35  109
  subtype3   20   74
  subtype4   37   83
  subtype5    6   30
  subtype6   18   68
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0  86   2   9
  subtype2        1 122   0  21
  subtype3        0  76   2  16
  subtype4        0 108   1  11
  subtype5        0  30   1   5
  subtype6        0  71   0  15
D4V6, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N0 (MOL+) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3B
  subtype1 39       2      16         0 10  11   3   0    1  5   6  1   2   1
  subtype2 35       3      19         1 13  33   8   1    6  8   7  2   4   0
  subtype3 27       2      13         0 10  11   4   0    0  9   9  3   4   0
  subtype4 20       2      16         0 24  20   6   0    4  8  12  2   5   0
  subtype5 11       1       4         0  3   5   1   0    0  4   3  2   2   0
  subtype6 26       4      14         0 14   7   1   1    4  4   6  3   1   1
          vv
clus       NX
  subtype1  0
  subtype2  4
  subtype3  2
  subtype4  1
  subtype5  0
  subtype6  0
D4V7, multiclass
D4V8, continuous
D4V9, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1       5        6        0        1        42        23         0
  subtype2      14       14        0        2        41        40         0
  subtype3       6        5        1        2        28        19         1
  subtype4       5        7        1        0        34        33         0
  subtype5       3        5        0        1         9         3         0
  subtype6      14        8        0        2        31        13         1
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE X
  subtype1         12          1          3        2       1
  subtype2         21          4          6        0       2
  subtype3         20          1          7        2       2
  subtype4         26          7          6        1       0
  subtype5          8          2          4        1       0
  subtype6         12          1          4        0       0
D4V10, multiclass

Clustering(5) Variable = RPPA_CNMF
D5V1, survival
          sevent
clus2        0   1
  subtype1 113  22
  subtype2 121  11
  subtype3 102  11
subtype1 subtype2 subtype3 
     135      132      113 
subtype1 subtype2 subtype3 
      22       11       11 
$subtype1
TCGA-A1-A0SH TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U 
       47.24        31.79        28.01        17.98        64.11        22.03 
TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0CY 
       63.06        25.08        60.07        24.79        42.84        42.35 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0EY TCGA-A2-A0SV 
       21.14        25.84        25.02        67.50        15.95        27.12 
TCGA-A2-A0SW TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0YE 
       44.84        42.35        11.08        10.59         7.96         8.28 
TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A7-A0CE TCGA-A7-A0CJ 
       13.28        12.46        10.72        21.73         8.32         6.18 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A06R TCGA-A8-A06U TCGA-A8-A06X 
       12.26         8.78         9.44        17.95        29.00        31.00 
TCGA-A8-A06Y TCGA-A8-A075 TCGA-A8-A07I TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07W 
       26.01        17.00        14.01         9.99         8.98         9.99 
TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A08X TCGA-A8-A09A TCGA-A8-A09I 
       37.05         9.99        30.97        33.99         9.99        33.07 
TCGA-A8-A09M TCGA-A8-A09R TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AN-A04D TCGA-AN-A0AK 
       15.02         8.98        14.01         0.99         1.71         7.33 
TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AS TCGA-AN-A0AT TCGA-AN-A0FJ 
        6.48         0.16         0.30         0.30         0.33         7.92 
TCGA-AN-A0FL TCGA-AN-A0FV TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AN-A0XW TCGA-AO-A03L 
        7.56         0.33         0.53         0.33         5.59        80.28 
TCGA-AO-A03M TCGA-AO-A03O TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J6 TCGA-AO-A0JB 
       47.84        81.63        59.05        19.23        25.48        37.81 
TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D 
       59.61        64.60        43.36       102.54        96.10        64.04 
TCGA-AO-A12F TCGA-AR-A0TP TCGA-AR-A0TQ TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TU 
       48.36        78.64        49.32        37.41        55.20        11.84 
TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U3 
       29.72        24.30        55.86         0.26         6.08        74.40 
TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AT TCGA-AR-A1AY 
       75.55        61.84        43.53        43.04        41.82        20.19 
TCGA-B6-A0I6 TCGA-B6-A0I9 TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RU TCGA-B6-A0X1 
       32.58        12.13       176.98       127.27       131.21       186.44 
TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0BF TCGA-BH-A0BW TCGA-BH-A0BZ TCGA-BH-A0C0 
       39.55        51.68        25.68        11.67        49.05        41.75 
TCGA-BH-A0C3 TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E2 TCGA-BH-A0EE TCGA-BH-A18G 
       48.13        48.23         4.37        12.36        31.00         2.01 
TCGA-BH-A18P TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18V TCGA-C8-A137 
       30.28        55.63        37.51         7.36        51.12         0.85 
TCGA-C8-A138 TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 
        0.23         8.68         6.90         2.01         5.65         0.07 
TCGA-E2-A14P TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A152 
       16.01        22.75        22.62        17.03        19.43        19.33 
TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ 
       14.79        16.93        64.57 

$subtype2
TCGA-A1-A0SJ TCGA-A2-A04V TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU 
       14.01        63.12        78.64        75.55        63.02         5.16 
TCGA-A2-A0CV TCGA-A2-A0CW TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EO TCGA-A2-A0EV 
       61.48        57.53        24.20        16.31        71.70        17.92 
TCGA-A2-A0SU TCGA-A2-A0T5 TCGA-A2-A0YD TCGA-A2-A0YI TCGA-A7-A0CD TCGA-A7-A0CH 
       44.42        10.55        18.08        11.77         5.59         5.29 
TCGA-A7-A0DB TCGA-A7-A13F TCGA-A8-A06Z TCGA-A8-A07S TCGA-A8-A07Z TCGA-A8-A082 
        4.60         6.44         1.02         7.96        28.04        18.05 
TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G TCGA-A8-A08T TCGA-A8-A08Z 
       36.95        13.02         0.99        19.92        93.04        40.01 
TCGA-A8-A091 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09E TCGA-A8-A09W 
       19.07         9.99        12.00         1.02        30.97         0.99 
TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AJ TCGA-AN-A0FD TCGA-AN-A0FF 
        0.23         0.62         2.93         7.99         6.41         4.60 
TCGA-AN-A0FK TCGA-AN-A0FT TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XO 
        6.97         6.02         0.36         0.33         0.33        12.33 
TCGA-AN-A0XP TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AO-A03N TCGA-AO-A03P TCGA-AO-A0J3 
        0.30         0.33         0.33        54.08        84.69         9.93 
TCGA-AO-A0J7 TCGA-AO-A0JC TCGA-AO-A0JG TCGA-AO-A126 TCGA-AO-A12A TCGA-AO-A12B 
        8.55        50.86        14.76        93.70        90.54        77.56 
TCGA-AO-A12C TCGA-AO-A12G TCGA-AO-A12H TCGA-AR-A0TR TCGA-AR-A1AK TCGA-AR-A1AS 
       65.52        41.59        28.34         5.26        51.22        40.83 
TCGA-AR-A1AV TCGA-B6-A0IB TCGA-B6-A0IG TCGA-B6-A0IO TCGA-B6-A0RL TCGA-B6-A0RM 
       42.58       129.57       146.50       110.14        81.17        78.02 
TCGA-B6-A0RP TCGA-B6-A0X0 TCGA-BH-A0B1 TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BQ 
      102.77       129.70        37.74        21.70        36.72        27.16 
TCGA-BH-A0BS TCGA-BH-A0BV TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK 
       53.92        49.94        42.90        45.80        38.01        13.91 
TCGA-BH-A0DT TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0H5 TCGA-BH-A0H9 TCGA-BH-A0HA 
       38.47        44.78        24.49        35.51        41.00        28.14 
TCGA-BH-A0HK TCGA-BH-A0HL TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0W4 
        5.85         2.37        12.89        51.29        27.25         5.75 
TCGA-BH-A0W5 TCGA-BH-A18F TCGA-BH-A18N TCGA-BH-A18S TCGA-D8-A140 TCGA-D8-A145 
       17.85         8.81        37.74        66.05         0.89         1.61 
TCGA-D8-A146 TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10E 
       11.31        25.08        38.53        11.57        24.59        13.74 
TCGA-E2-A14O TCGA-E2-A14Q TCGA-E2-A14S TCGA-E2-A14W TCGA-E2-A153 TCGA-E2-A154 
       38.53        32.02        27.42        27.39        19.27        10.68 
TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15G 
       18.18        15.81        16.50        10.36        17.00        10.36 
TCGA-E2-A15H TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15P 
        1.38        15.22         1.12        10.88        12.99        10.36 
TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1BC TCGA-E2-A1BD 
       10.85         9.01         8.78        29.95         9.76        10.42 

$subtype3
TCGA-A2-A04N TCGA-A2-A04Q TCGA-A2-A0CP TCGA-A2-A0CZ TCGA-A2-A0ER TCGA-A2-A0ES 
      103.66        41.92        82.03        43.99        62.53        32.91 
TCGA-A2-A0EU TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0ST TCGA-A2-A0T3 TCGA-A2-A0T4 
       24.10        25.32        18.05        54.02        14.99        12.99 
TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YF TCGA-A2-A0YK TCGA-A2-A0YL 
       11.31        13.05        21.14         9.50        10.98         8.81 
TCGA-A2-A0YT TCGA-A7-A0CG TCGA-A7-A0D9 TCGA-A8-A06P TCGA-A8-A076 TCGA-A8-A079 
       23.77         5.46         5.23        13.02        53.95         9.01 
TCGA-A8-A07E TCGA-A8-A07F TCGA-A8-A07P TCGA-A8-A084 TCGA-A8-A08O TCGA-A8-A095 
       19.99        18.94        10.98        15.06        30.97        41.95 
TCGA-A8-A09K TCGA-A8-A0A4 TCGA-AN-A0FS TCGA-AN-A0FX TCGA-AN-A0XN TCGA-AO-A0J5 
       29.95        13.02         6.28         0.33         0.33        24.16 
TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JF TCGA-AO-A0JI TCGA-AO-A0JJ TCGA-AO-A0JM 
        9.11        41.26        11.64        38.53        49.71        60.03 
TCGA-AO-A128 TCGA-AO-A12E TCGA-AQ-A04L TCGA-AR-A0TX TCGA-AR-A0TZ TCGA-AR-A0U2 
       94.59        57.27       110.43         0.49        43.17        83.87 
TCGA-AR-A0U4 TCGA-AR-A1AJ TCGA-AR-A1AL TCGA-AR-A1AP TCGA-AR-A1AU TCGA-AR-A1AW 
       53.49        52.73        48.82        39.95        46.32        35.24 
TCGA-AR-A1AX TCGA-B6-A0I2 TCGA-B6-A0I8 TCGA-B6-A0IK TCGA-B6-A0RG TCGA-B6-A0RH 
       36.26       125.79        24.62        18.77        68.45       188.98 
TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RQ TCGA-B6-A0RT TCGA-B6-A0RV TCGA-B6-A0WX 
      172.96       162.02       140.48        89.46       157.41        21.47 
TCGA-BH-A0AU TCGA-BH-A0AV TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B4 
       24.53        38.79        25.55        28.50        46.92        39.16 
TCGA-BH-A0B5 TCGA-BH-A0B7 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BO TCGA-BH-A0BP 
       48.36        56.98        37.22        32.02        35.67        48.69 
TCGA-BH-A0BR TCGA-BH-A0BT TCGA-BH-A0C1 TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DP 
       53.65        45.57        43.99        23.44        22.13        15.65 
TCGA-BH-A0DS TCGA-BH-A0DV TCGA-BH-A0E1 TCGA-BH-A0E6 TCGA-BH-A0E9 TCGA-BH-A0EA 
        2.53        45.17        15.68         9.60        46.19        32.65 
TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0HN TCGA-BH-A0HP 
       24.43        30.15        24.56        23.05        16.96        13.61 
TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A18J TCGA-BH-A18L TCGA-BH-A18M TCGA-BH-A18U 
       28.50         5.59        20.09        26.66        72.56        51.39 
TCGA-E2-A108 TCGA-E2-A10C TCGA-E2-A14T TCGA-E2-A14V TCGA-E2-A15C TCGA-E2-A15F 
        4.08        28.04        29.26        24.59        16.31        15.39 
TCGA-E2-A15M TCGA-E2-A1B0 TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1B6 
        7.69        41.79        44.75        25.45        11.11 

subtype1 subtype2 subtype3 
    0.07     0.23     0.33 
subtype1 subtype2 subtype3 
  186.44   146.50   188.98 
subtype1 subtype2 subtype3 
  22.750   17.985   28.500 
[1] "0.1 - 186.4 (22.8)" "0.2 - 146.5 (18.0)" "0.3 - 189.0 (28.5)"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
  [7] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
 [73] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [91] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[121] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[235] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[277] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[289] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[295] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[307] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[331] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[379] "subtype2" "subtype2"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
  [7] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
 [73] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [91] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[121] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[235] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[277] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[289] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[295] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[307] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[331] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[379] "subtype2" "subtype2"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
  [7] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
 [73] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [91] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[121] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[235] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[277] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[289] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[295] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[307] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[331] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[379] "subtype2" "subtype2"
D5V2, continuous
D5V3, binary
          cls
clus         0   1
  subtype1 152   0
  subtype2 132   4
  subtype3 119   1
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  152    0
  subtype2  132    4
  subtype3  119    1
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      152      132      119
  MALE          0        4        1
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                           139                              4
  subtype2                           120                              5
  subtype3                            94                             21
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   1                                1
  subtype2                   0                                3
  subtype3                   0                                3
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  0              7
  subtype2                  2              6
  subtype3                  0              2
D5V4, multiclass
D5V5, binary
          cls
clus         0   1
  subtype1  47 105
  subtype2  42  94
  subtype3  36  84
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   47  105
  subtype2   42   94
  subtype3   36   84
     clus
vv    subtype1 subtype2 subtype3
  NO        47       42       36
  YES      105       94       84
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 143   8   1
  subtype2        0 129   3   4
  subtype3        1 114   3   2
D5V6, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3C NX
  subtype1 41       2      27 24  14   3   0    4 11  11  4   7   1  3
  subtype2 31       6      28 10  35   4   1    3  7   3  2   4   0  2
  subtype3 28       5      24 14  14   1   0    5  9  11  3   4   0  2
D5V7, multiclass
D5V8, continuous
D5V9, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1       6        8        0        55        36         24          2
  subtype2      11       13        1        46        38         14          6
  subtype3      13       10        3        36        20         24          5
          vv
clus       STAGE IIIC STAGE IV STAGE X
  subtype1         10        8       3
  subtype2          1        3       3
  subtype3          4        3       2
D5V10, multiclass

Clustering(6) Variable = RPPA_CHIERARCHICAL
D6V1, survival
          sevent
clus2        0   1
  subtype1 135  17
  subtype2 102  10
  subtype3  99  17
subtype1 subtype2 subtype3 
     152      112      116 
subtype1 subtype2 subtype3 
      17       10       17 
$subtype1
TCGA-A1-A0SH TCGA-A2-A04V TCGA-A2-A04Y TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT 
       47.24        63.12        25.08        78.64        75.55        63.02 
TCGA-A2-A0CU TCGA-A2-A0CV TCGA-A2-A0CW TCGA-A2-A0CY TCGA-A2-A0D3 TCGA-A2-A0D4 
        5.16        61.48        57.53        42.35        24.20        16.31 
TCGA-A2-A0EO TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0T5 TCGA-A2-A0YD TCGA-A2-A0YH 
       71.70        27.12        44.84        10.55        18.08        12.46 
TCGA-A7-A0CD TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0DB TCGA-A7-A13F TCGA-A8-A06R 
        5.59         5.29         6.18         4.60         6.44        17.95 
TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A07S TCGA-A8-A07W 
       29.00        31.00        26.01         1.02         7.96         9.99 
TCGA-A8-A07Z TCGA-A8-A082 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G 
       28.04        18.05        36.95        13.02         0.99        19.92 
TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A091 TCGA-A8-A099 TCGA-A8-A09A TCGA-A8-A09C 
       93.04        40.01        19.07         9.99         9.99         1.02 
TCGA-A8-A09E TCGA-A8-A09M TCGA-A8-A09R TCGA-A8-A09W TCGA-A8-A0A4 TCGA-AN-A04A 
       30.97        15.02         8.98         0.99        13.02         2.93 
TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FF 
        7.99         7.33         0.16         0.30         6.41         4.60 
TCGA-AN-A0FK TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XO TCGA-AN-A0XP 
        6.97         0.36         0.33         0.33        12.33         0.30 
TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A03N 
        0.33         0.33         5.59        80.28        47.84        54.08 
TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A0J3 TCGA-AO-A0J7 TCGA-AO-A0JB TCGA-AO-A0JC 
       81.63        84.69         9.93         8.55        37.81        50.86 
TCGA-AO-A0JD TCGA-AO-A0JG TCGA-AO-A0JJ TCGA-AO-A126 TCGA-AO-A12A TCGA-AO-A12B 
       59.61        14.76        49.71        93.70        90.54        77.56 
TCGA-AO-A12E TCGA-AO-A12G TCGA-AO-A12H TCGA-AR-A0TR TCGA-AR-A0TT TCGA-AR-A0TV 
       57.27        41.59        28.34         5.26        55.20        29.72 
TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0U3 TCGA-AR-A1AP TCGA-AR-A1AS TCGA-AR-A1AV 
       24.30        55.86        74.40        39.95        40.83        42.58 
TCGA-B6-A0IB TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RP TCGA-B6-A0X0 TCGA-BH-A0BF 
      129.57        81.17        78.02       102.77       129.70        25.68 
TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BV TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0C3 
       27.16        53.92        49.94        49.05        41.75        48.13 
TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0DT TCGA-BH-A0E2 
       42.90        45.80        38.01        13.91        38.47        12.36 
TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0H5 TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HK 
       44.78        24.49        35.51        41.00        28.14         5.85 
TCGA-BH-A0HL TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0W4 TCGA-BH-A0W5 
        2.37        12.89        51.29        27.25         5.75        17.85 
TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-D8-A13Y TCGA-D8-A140 TCGA-D8-A146 
       37.74        30.28        66.05         8.68         0.89        11.31 
TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10E TCGA-E2-A14Q 
       25.08        38.53        11.57        24.59        13.74        32.02 
TCGA-E2-A14S TCGA-E2-A14W TCGA-E2-A14Z TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 
       27.42        27.39        17.03        19.27        10.68        18.18 
TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15G TCGA-E2-A15J 
       15.81        16.50        10.36        17.00        10.36        15.22 
TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T 
        1.12        10.88        12.99        10.85         9.01         8.78 
TCGA-E2-A1B4 TCGA-E2-A1BD 
       29.95        10.42 

$subtype2
TCGA-A1-A0SJ TCGA-A2-A04N TCGA-A2-A04Q TCGA-A2-A0CP TCGA-A2-A0CZ TCGA-A2-A0ER 
       14.01       103.66        41.92        82.03        43.99        62.53 
TCGA-A2-A0ES TCGA-A2-A0EU TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0SU 
       32.91        24.10        17.92        25.32        18.05        44.42 
TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YF 
       14.99        12.99        11.31        13.05        21.14         9.50 
TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A0YT TCGA-A7-A0CG TCGA-A7-A0D9 
       11.77        10.98         8.81        23.77         5.46         5.23 
TCGA-A8-A06P TCGA-A8-A079 TCGA-A8-A07E TCGA-A8-A07F TCGA-A8-A07P TCGA-A8-A084 
       13.02         9.01        19.99        18.94        10.98        15.06 
TCGA-A8-A08O TCGA-A8-A095 TCGA-A8-A09B TCGA-A8-A09K TCGA-AN-A041 TCGA-AN-A049 
       30.97        41.95        12.00        29.95         0.23         0.62 
TCGA-AN-A0FS TCGA-AN-A0XN TCGA-AO-A0J5 TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JF 
        6.28         0.33        24.16         9.11        41.26        11.64 
TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A12C TCGA-AQ-A04L TCGA-AR-A0TZ TCGA-AR-A1AK 
       38.53        60.03        65.52       110.43        43.17        51.22 
TCGA-AR-A1AL TCGA-AR-A1AU TCGA-AR-A1AW TCGA-AR-A1AX TCGA-B6-A0I2 TCGA-B6-A0I8 
       48.82        46.32        35.24        36.26       125.79        24.62 
TCGA-B6-A0IG TCGA-B6-A0IK TCGA-B6-A0IO TCGA-B6-A0RG TCGA-B6-A0RN TCGA-B6-A0RO 
      146.50        18.77       110.14        68.45       172.96       162.02 
TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-BH-A0AU TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 
      140.48       157.41        24.53        25.55        28.50        46.92 
TCGA-BH-A0B1 TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BJ 
       37.74        39.16        48.36        37.22        32.02        21.70 
TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BR TCGA-BH-A0BT TCGA-BH-A0C1 
       36.72        35.67        48.69        53.65        45.57        43.99 
TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DP TCGA-BH-A0DS TCGA-BH-A0DV TCGA-BH-A0E1 
       23.44        22.13        15.65         2.53        45.17        15.68 
TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0H6 TCGA-BH-A0H7 
       46.19        32.65        24.43        30.15        24.56        23.05 
TCGA-BH-A0HN TCGA-BH-A0HP TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A18F TCGA-BH-A18J 
       16.96        13.61        28.50         5.59         8.81        20.09 
TCGA-BH-A18L TCGA-BH-A18M TCGA-BH-A18U TCGA-D8-A145 TCGA-E2-A108 TCGA-E2-A10C 
       26.66        72.56        51.39         1.61         4.08        28.04 
TCGA-E2-A14O TCGA-E2-A14T TCGA-E2-A15C TCGA-E2-A15F TCGA-E2-A15M TCGA-E2-A15P 
       38.53        29.26        16.31        15.39         7.69        10.36 
TCGA-E2-A1B0 TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1BC 
       41.79        44.75        25.45         9.76 

$subtype3
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04W 
       31.79        28.01        17.98        64.11        22.03        63.06 
TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 
       60.07        24.79        42.84        21.14        25.84        25.02 
TCGA-A2-A0EQ TCGA-A2-A0EY TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T1 
       67.50        15.95        54.02        42.35        11.08        10.59 
TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YG TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A7-A0CE 
        7.96         8.28        13.28        10.72        21.73         8.32 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A07I 
       12.26         8.78         9.44        17.00        53.95        14.01 
TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A08X 
        9.99         8.98        37.05         9.99        30.97        33.99 
TCGA-A8-A09I TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AR 
       33.07        14.01         0.99         1.71         6.48         0.30 
TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AN-A0FX 
        0.33         7.92         7.56         6.02         0.33         0.33 
TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J6 TCGA-AO-A0JE 
        0.53         0.33        59.05        19.23        25.48        64.60 
TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F 
       43.36       102.54        94.59        96.10        64.04        48.36 
TCGA-AR-A0TP TCGA-AR-A0TQ TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0TX TCGA-AR-A0U0 
       78.64        49.32        37.41        11.84         0.49         0.26 
TCGA-AR-A0U1 TCGA-AR-A0U2 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ 
        6.08        83.87        53.49        75.55        61.84        52.73 
TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AT TCGA-AR-A1AY TCGA-B6-A0I6 TCGA-B6-A0I9 
       43.53        43.04        41.82        20.19        32.58        12.13 
TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RH TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX 
      176.98       127.27       188.98        89.46       131.21        21.47 
TCGA-B6-A0X1 TCGA-BH-A0AV TCGA-BH-A0B3 TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BW 
      186.44        38.79        39.55        56.98        51.68        11.67 
TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A18G TCGA-BH-A18Q 
       48.23         4.37         9.60        31.00         2.01        55.63 
TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18V TCGA-C8-A137 TCGA-C8-A138 TCGA-D8-A13Z 
       37.51         7.36        51.12         0.85         0.23         6.90 
TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-E2-A14P TCGA-E2-A14V TCGA-E2-A14X 
        2.01         5.65         0.07        16.01        24.59        22.75 
TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A152 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A15H 
       22.62        19.43        19.33        14.79        16.93         1.38 
TCGA-E2-A1AZ TCGA-E2-A1B6 
       64.57        11.11 

subtype1 subtype2 subtype3 
    0.16     0.23     0.07 
subtype1 subtype2 subtype3 
  129.70   172.96   188.98 
subtype1 subtype2 subtype3 
   24.25    25.50    21.88 
[1] "0.2 - 129.7 (24.2)" "0.2 - 173.0 (25.5)" "0.1 - 189.0 (21.9)"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [61] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [85] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[223] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[241] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[265] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[325] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[331] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[337] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[349] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[361] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[373] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[379] "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [61] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [85] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[223] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[241] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[265] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[325] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[331] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[337] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[349] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[361] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[373] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[379] "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [61] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [85] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[223] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[241] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[265] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[325] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[331] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[337] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[349] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[361] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[373] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[379] "subtype2" "subtype1"
D6V2, continuous
D6V3, binary
          cls
clus         0   1
  subtype1 159   4
  subtype2 114   1
  subtype3 130   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  159    4
  subtype2  114    1
  subtype3  130    0
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      159      114      130
  MALE          4        1        0
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                           143                              8
  subtype2                            91                             19
  subtype3                           119                              3
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   0                                4
  subtype2                   0                                3
  subtype3                   1                                0
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  2              6
  subtype2                  0              2
  subtype3                  0              7
D6V4, multiclass
D6V5, binary
          cls
clus         0   1
  subtype1  48 115
  subtype2  36  79
  subtype3  41  89
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   48  115
  subtype2   36   79
  subtype3   41   89
     clus
vv    subtype1 subtype2 subtype3
  NO        48       36       41
  YES      115       79       89
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 153   6   4
  subtype2        1 109   3   2
  subtype3        0 124   5   1
D6V6, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3C NX
  subtype1 42       5      31 14  33   3   1    4 13   6  2   5   0  4
  subtype2 22       6      23 11  20   1   0    5  7  11  3   4   0  2
  subtype3 36       2      25 23  10   4   0    3  7   8  4   6   1  1
D6V7, multiclass
D6V8, continuous
D6V9, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1      14       12        1        52        42         23          7
  subtype2      11       12        3        31        21         23          5
  subtype3       5        7        0        54        31         16          1
          vv
clus       STAGE IIIC STAGE IV STAGE X
  subtype1          2        6       4
  subtype2          4        3       2
  subtype3          9        5       2
D6V10, multiclass

Clustering(7) Variable = MRNASEQ_CNMF
D7V1, survival
          sevent
clus2        0   1
  subtype1 128  19
  subtype2  64   8
  subtype3 196  16
  subtype4 100  26
  subtype5 178  24
  subtype6  44   1
  subtype7  13   2
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 
     147       72      212      126      202       45       15 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 
      19        8       16       26       24        1        2 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q 
        8.52        31.79        28.01        19.17        17.98        41.92 
TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A0CM TCGA-A2-A0CY TCGA-A2-A0D0 TCGA-A2-A0D2 
       64.11        22.03        24.79        42.35        21.14        25.02 
TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ 
       54.02        42.35        11.08         7.96         8.28        10.72 
TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A2-A25F TCGA-A2-A3XX TCGA-A2-A3Y0 TCGA-A7-A0CE 
       21.73        12.20         3.72        38.40        28.21         8.32 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26G TCGA-A7-A26I TCGA-A7-A3IY 
       12.26         8.78         9.44         6.87         4.01         4.96 
TCGA-A7-A3J0 TCGA-A8-A06Y TCGA-A8-A07C TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U 
        2.50        26.01        19.07         9.99         8.98         9.96 
TCGA-A8-A08R TCGA-A8-A08X TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AC-A2QJ TCGA-AN-A04D 
        0.99        33.99        38.53         1.02         2.27         1.71 
TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FX 
        6.48         0.16         0.33         7.92         7.56         0.33 
TCGA-AN-A0G0 TCGA-AN-A0XN TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J4 TCGA-AO-A0J6 
        0.53         0.33         0.33        59.05         9.67        25.48 
TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12F TCGA-AO-A1KR 
       43.36       102.54        94.59        96.10        48.36        70.36 
TCGA-AQ-A04J TCGA-AR-A0TP TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0U0 TCGA-AR-A0U4 
        5.23        78.64        37.41        11.84         0.26        53.49 
TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY 
       75.55        61.84        52.73        43.04        17.19        20.19 
TCGA-AR-A24Q TCGA-AR-A251 TCGA-AR-A256 TCGA-AR-A2LR TCGA-B6-A0I1 TCGA-B6-A0I2 
       66.02        45.14        93.83        20.38        77.62       125.79 
TCGA-B6-A0I6 TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RT TCGA-B6-A0RU 
       32.58       176.98       127.27       211.53        89.46       131.21 
TCGA-B6-A0WX TCGA-B6-A0X1 TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0B3 TCGA-BH-A0B9 
       21.47       186.44       101.52        38.79        39.55        51.68 
TCGA-BH-A0BG TCGA-BH-A0BL TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 
       24.85        44.02        11.67        48.23         4.37         9.60 
TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18Q TCGA-BH-A18T TCGA-BH-A18V 
        5.59        12.23         2.01        55.63         7.36        51.12 
TCGA-BH-A1F0 TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FN TCGA-C8-A1HJ TCGA-C8-A27B 
       25.81        97.48       114.12        72.07         0.16         0.99 
TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1JL TCGA-D8-A1JM TCGA-D8-A1XK 
        2.01         5.65         0.07         8.71         7.82        10.72 
TCGA-D8-A1XQ TCGA-D8-A1XW TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M TCGA-E2-A14N 
        5.82         3.85         7.46         4.60         4.73        44.38 
TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 
       27.78        22.75        22.62        19.43        14.79        16.93 
TCGA-E2-A1AZ TCGA-E2-A1II TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK 
       64.57        27.95        11.51        94.52        90.41         8.75 
TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A243 TCGA-E9-A244 TCGA-EW-A1OW TCGA-EW-A1P4 
       33.34         7.86         1.41         0.66        15.22        16.47 
TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PH TCGA-EW-A3U0 TCGA-GI-A2C9 
       20.88         7.86        19.99         4.57         7.53        23.11 
TCGA-GM-A2DF TCGA-GM-A3XL TCGA-LL-A441 
       42.71        56.45         2.99 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SH TCGA-A2-A0CP TCGA-A2-A0CV TCGA-A2-A0CZ 
       14.37        43.40        47.24        82.03        61.48        43.99 
TCGA-A2-A0EO TCGA-A2-A0ES TCGA-A2-A0EX TCGA-A2-A0SU TCGA-A2-A0T7 TCGA-A2-A0YK 
       71.70        32.91        18.05        44.42        13.05        10.98 
TCGA-A2-A0YL TCGA-A2-A1G0 TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A3KC 
        8.81        12.49         4.34        42.25        97.58        11.93 
TCGA-A2-A3KD TCGA-A7-A13H TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-AC-A23G TCGA-AC-A2FB 
       26.40        18.12        13.02        21.04        10.82         1.45 
TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A3OD TCGA-AC-A3QP TCGA-AC-A3YI 
       55.40        36.99        38.79         1.15         9.40         1.51 
TCGA-AO-A03R TCGA-AO-A1KO TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AO TCGA-AR-A1AX 
       56.12        14.73        51.22        48.82        43.53        36.26 
TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A2LH TCGA-AR-A2LO TCGA-B6-A0IE TCGA-B6-A0IH 
       53.26        50.96        20.22        20.81        65.69       112.37 
TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-B6-A0WY TCGA-BH-A0AZ TCGA-BH-A0B1 TCGA-BH-A0DI 
      140.48       157.41       113.75        28.50        37.74        22.13 
TCGA-BH-A0DO TCGA-BH-A0E9 TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A1FB TCGA-BH-A1FE 
       17.26        46.19        37.78        35.51       120.62        74.73 
TCGA-BH-A1FH TCGA-BH-A201 TCGA-BH-A28O TCGA-C8-A1HI TCGA-D8-A27I TCGA-D8-A27V 
       36.92         6.87        10.62         0.07         6.08         2.40 
TCGA-E2-A14Q TCGA-E2-A14U TCGA-E2-A15E TCGA-E2-A15H TCGA-E2-A1B1 TCGA-E2-A1IF 
       32.02        27.55        17.00         1.38        44.75        31.43 
TCGA-E2-A1IO TCGA-EW-A1IW TCGA-EW-A1PG TCGA-EW-A2FV TCGA-GM-A2DI TCGA-GM-A3XG 
       14.73         8.28        28.77         7.82        61.91        32.25 

$subtype3
TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A2-A04N TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0D3 
       48.10        14.24       103.66        78.64        75.55        24.20 
TCGA-A2-A0EM TCGA-A2-A0EN TCGA-A2-A0EV TCGA-A2-A0T5 TCGA-A2-A0T6 TCGA-A2-A0YC 
       90.64        82.68        17.92        10.55        11.31        21.14 
TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YI TCGA-A2-A1FZ TCGA-A7-A0CH TCGA-A7-A0CJ 
       18.08         9.50        11.77        13.45         5.29         6.18 
TCGA-A7-A0DB TCGA-A7-A13G TCGA-A7-A26E TCGA-A7-A26H TCGA-A7-A2KD TCGA-A7-A3J1 
        4.60         6.84        13.84         2.10         5.95         2.47 
TCGA-A8-A06P TCGA-A8-A06T TCGA-A8-A07F TCGA-A8-A07G TCGA-A8-A07S TCGA-A8-A08C 
       13.02        41.06        18.94        18.94         7.96        19.96 
TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A099 
       19.07        93.04        40.01        17.92        41.95         9.99 
TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09N TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A0A1 
       12.00         1.02         1.02        19.00        15.02        12.00 
TCGA-A8-A0A2 TCGA-A8-A0A9 TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AC-A23E TCGA-AC-A2B8 
       19.00        13.02        17.00        38.04         2.37         1.45 
TCGA-AC-A2QI TCGA-AC-A3TN TCGA-AC-A3YJ TCGA-AN-A03Y TCGA-AN-A046 TCGA-AN-A0FF 
        0.92         1.12         1.28         0.33         0.33         4.60 
TCGA-AN-A0FK TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AN-A0XV 
        6.97        12.33         0.30         0.33         0.33         5.33 
TCGA-AO-A0J8 TCGA-AO-A0JF TCGA-AO-A125 TCGA-AO-A12A TCGA-AO-A12B TCGA-AO-A12G 
        9.11        11.64        99.22        90.54        77.56        41.59 
TCGA-AQ-A1H2 TCGA-AQ-A1H3 TCGA-AR-A0TR TCGA-AR-A1AP TCGA-AR-A1AS TCGA-AR-A1AV 
        7.56         5.33         5.26        39.95        40.83        42.58 
TCGA-AR-A24K TCGA-AR-A24M TCGA-AR-A24N TCGA-AR-A24P TCGA-AR-A24S TCGA-AR-A24X 
       50.89        65.42        68.19         0.85        62.07        48.16 
TCGA-AR-A255 TCGA-AR-A2LE TCGA-AR-A2LL TCGA-AR-A2LM TCGA-B6-A0I5 TCGA-B6-A0IA 
       34.78       128.65         7.33        40.01       149.56       220.87 
TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IP TCGA-B6-A0RI TCGA-B6-A0RN TCGA-B6-A0RP 
      129.57        50.70       110.93       223.40       172.96       102.77 
TCGA-B6-A0WS TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X7 TCGA-B6-A1KI TCGA-B6-A2IU 
       97.48       129.57       129.70        58.88        48.10       159.12 
TCGA-BH-A0B5 TCGA-BH-A0BD TCGA-BH-A0BJ TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BT 
       48.36        18.21        21.70        27.16        53.92        45.57 
TCGA-BH-A0BV TCGA-BH-A0C1 TCGA-BH-A0DH TCGA-BH-A0DP TCGA-BH-A0DS TCGA-BH-A0DT 
       49.94        43.99        38.01        15.65         2.53        38.47 
TCGA-BH-A0E1 TCGA-BH-A0E7 TCGA-BH-A0EA TCGA-BH-A0EB TCGA-BH-A0H6 TCGA-BH-A0HF 
       15.68        44.78        32.65        24.49        24.56        23.90 
TCGA-BH-A0HI TCGA-BH-A0HN TCGA-BH-A0HO TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0HU 
       20.35        16.96         2.50        13.61        36.85        12.89 
TCGA-BH-A0W3 TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A0W7 TCGA-BH-A18I TCGA-BH-A18M 
        5.92         5.75        17.85        18.35         7.23        72.56 
TCGA-BH-A18S TCGA-BH-A1EO TCGA-BH-A1ET TCGA-BH-A1FD TCGA-BH-A1FJ TCGA-BH-A1FL 
       66.05        91.99        82.85        33.14        63.35        55.00 
TCGA-BH-A28Q TCGA-C8-A26V TCGA-C8-A26W TCGA-D8-A141 TCGA-D8-A146 TCGA-D8-A1JD 
        6.44         0.30         0.23         3.72        11.31         8.98 
TCGA-D8-A1JE TCGA-D8-A1JH TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1X6 
        1.87         9.34         5.49         3.45         4.04         7.76 
TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XO TCGA-D8-A1XR 
        2.79         8.94         6.61         2.66         7.96         5.52 
TCGA-D8-A1XS TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XY TCGA-D8-A1Y1 TCGA-D8-A27E 
        1.64         4.90         4.80         2.66         3.78         5.98 
TCGA-D8-A27K TCGA-D8-A27L TCGA-D8-A27P TCGA-D8-A27T TCGA-E2-A10B TCGA-E2-A10E 
        3.88         4.11         0.76         4.44        24.59        13.74 
TCGA-E2-A10F TCGA-E2-A14O TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A156 TCGA-E2-A15C 
       11.84        38.53        19.27        10.68        15.81        16.31 
TCGA-E2-A15D TCGA-E2-A15G TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L 
       10.36        10.36        13.51        15.22         1.12        10.88 
TCGA-E2-A15P TCGA-E2-A1B4 TCGA-E2-A1BD TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL 
       10.36        29.95        10.42        23.84        17.03         0.46 
TCGA-E2-A1IN TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A2P5 
       12.89         4.18        43.13        33.37        12.76        10.72 
TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E9-A1R3 TCGA-E9-A1RB TCGA-E9-A1RC TCGA-E9-A1RD 
        5.49         7.13         2.10         0.69        40.37         0.66 
TCGA-E9-A1RI TCGA-E9-A227 TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A3HO TCGA-E9-A3X8 
        1.58         0.79         0.92         0.33         0.62         0.76 
TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1J2 TCGA-EW-A1J3 TCGA-EW-A1J5 TCGA-EW-A1P3 
       35.57         8.48         4.57         8.28         7.46        32.45 
TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PE TCGA-GM-A2D9 TCGA-GM-A2DM TCGA-GM-A2DN 
       12.00        10.26         3.48        59.57        76.64        77.33 
TCGA-GM-A3NY TCGA-GM-A3XN 
       24.43        53.92 

$subtype4
TCGA-A1-A0SI TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A0CX 
       20.84         7.96        39.32        63.06        44.35        42.84 
TCGA-A2-A0D1 TCGA-A2-A0EY TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0T1 TCGA-A2-A0YG 
       25.84        15.95        27.12        44.84        10.59        13.28 
TCGA-A2-A3XV TCGA-A2-A3XZ TCGA-A7-A26F TCGA-A8-A06Q TCGA-A8-A06R TCGA-A8-A06U 
       14.07        31.96         8.45         1.02        17.95        29.00 
TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A07B TCGA-A8-A07E TCGA-A8-A07I TCGA-A8-A084 
       17.00        53.95        33.01        19.99        14.01        15.06 
TCGA-A8-A08B TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A092 TCGA-A8-A097 
       23.08        37.05         9.99        30.97        16.01        12.00 
TCGA-A8-A09I TCGA-A8-A09W TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AC-A23C TCGA-AC-A23H 
       33.07         0.99        14.01         0.99         0.95         2.66 
TCGA-AN-A04C TCGA-AN-A0AJ TCGA-AN-A0AS TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AO-A03L 
        1.78         7.99         0.30         6.02         0.33        80.28 
TCGA-AO-A03N TCGA-AO-A0J2 TCGA-AO-A0JA TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JM 
       54.08        19.23        11.38        59.61        64.60        60.03 
TCGA-AO-A12D TCGA-AQ-A04L TCGA-AQ-A0Y5 TCGA-AR-A0TX TCGA-AR-A24U TCGA-AR-A250 
       64.04       110.43         5.62         0.49        53.36        56.12 
TCGA-AR-A254 TCGA-B6-A0I8 TCGA-B6-A0I9 TCGA-B6-A0IG TCGA-B6-A0IK TCGA-B6-A0RH 
       39.85        24.62        12.13       146.50        18.77       188.98 
TCGA-B6-A0RO TCGA-B6-A0RS TCGA-B6-A1KN TCGA-BH-A0AW TCGA-BH-A0B7 TCGA-BH-A0BA 
      162.02       100.67       109.48        20.45        56.98        37.22 
TCGA-BH-A0BR TCGA-BH-A0C0 TCGA-BH-A0DG TCGA-BH-A0DX TCGA-BH-A0DZ TCGA-BH-A0EE 
       53.65        41.75        23.44        47.41        16.27        31.00 
TCGA-BH-A0GY TCGA-BH-A0HY TCGA-BH-A18J TCGA-BH-A18K TCGA-BH-A18P TCGA-BH-A18R 
       30.15        28.50        20.09        90.81        30.28        37.51 
TCGA-BH-A18U TCGA-BH-A1EN TCGA-BH-A1EV TCGA-BH-A1EX TCGA-BH-A1EY TCGA-BH-A1F2 
       51.39        67.46        12.00        49.58        17.69        31.53 
TCGA-BH-A1FU TCGA-BH-A202 TCGA-BH-A203 TCGA-BH-A208 TCGA-C8-A137 TCGA-C8-A138 
       72.07         0.72        38.60        57.83         0.85         0.23 
TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A274 TCGA-C8-A275 
        0.23         0.07         0.36         0.43         0.03         0.03 
TCGA-C8-A278 TCGA-C8-A3M7 TCGA-D8-A13Z TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA 
        0.03         0.03         6.90         8.42         8.15         0.59 
TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JJ TCGA-D8-A1JK TCGA-D8-A1JN TCGA-D8-A1XJ 
        3.16         6.15         9.01         3.58         7.13        11.57 
TCGA-D8-A1XT TCGA-D8-A27N TCGA-E2-A107 TCGA-E2-A10C TCGA-E2-A14P TCGA-E2-A14V 
        6.35         4.77        25.08        28.04        16.01        24.59 
TCGA-E2-A152 TCGA-E2-A1B0 TCGA-E2-A1LB TCGA-E2-A1LE TCGA-E9-A1RH TCGA-E9-A226 
       19.33        41.79        31.96        28.90         0.46         0.53 
TCGA-E9-A248 TCGA-EW-A1PC TCGA-EW-A2FR TCGA-GM-A2DB TCGA-GM-A2DD TCGA-GM-A2DH 
        0.69         6.12        36.82        53.10        43.04        42.28 

$subtype5
TCGA-A1-A0SJ TCGA-A1-A0SQ TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A04Y TCGA-A2-A0CT 
       14.01        18.18        77.72        63.12        25.08        63.02 
TCGA-A2-A0CU TCGA-A2-A0CW TCGA-A2-A0D4 TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU 
        5.16        57.53        16.31        62.53        26.53        24.10 
TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW 
       14.99        12.99        12.46        23.77        15.12         7.27 
TCGA-A2-A1FX TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25E TCGA-A7-A0CD 
       30.74        12.23         8.48         9.37        82.55         5.59 
TCGA-A7-A0D9 TCGA-A7-A13F TCGA-A7-A26J TCGA-A7-A3IZ TCGA-A7-A3RF TCGA-A8-A06O 
        5.23         6.44         2.20         4.87         1.78        13.02 
TCGA-A8-A06X TCGA-A8-A06Z TCGA-A8-A079 TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07W 
       31.00         1.02         9.01        17.00        10.98         9.99 
TCGA-A8-A082 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08I 
       18.05        36.95        13.02        18.05        19.92        12.00 
TCGA-A8-A08O TCGA-A8-A091 TCGA-A8-A09A TCGA-A8-A09D TCGA-A8-A09K TCGA-A8-A09M 
       30.97        19.07         9.99        13.02        29.95        15.02 
TCGA-A8-A09Q TCGA-A8-A09R TCGA-AC-A2BM TCGA-AC-A2FM TCGA-AN-A03X TCGA-AN-A041 
       25.02         8.98        38.20        26.04         0.33         0.23 
TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AK TCGA-AN-A0FD TCGA-AN-A0FW TCGA-AN-A0FY 
        0.62         2.93         7.33         6.41         0.36         0.33 
TCGA-AN-A0FZ TCGA-AN-A0XT TCGA-AN-A0XW TCGA-AO-A03M TCGA-AO-A03P TCGA-AO-A03T 
        0.33         0.33         5.59        47.84        84.69        39.02 
TCGA-AO-A03V TCGA-AO-A0J3 TCGA-AO-A0J7 TCGA-AO-A0JG TCGA-AO-A0JI TCGA-AO-A126 
       29.13         9.93         8.55        14.76        38.53        93.70 
TCGA-AO-A12C TCGA-AO-A12H TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AO-A1KT 
       65.52        28.34        82.62        49.94         0.53        17.79 
TCGA-AQ-A04H TCGA-AR-A0TQ TCGA-AR-A0TT TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY 
       14.43        49.32        55.20        29.72        24.30        55.86 
TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A1AU TCGA-AR-A24H TCGA-AR-A24L 
       43.17        83.87        74.40        46.32       109.58        73.02 
TCGA-AR-A24R TCGA-AR-A24V TCGA-AR-A24Z TCGA-AR-A252 TCGA-AR-A2LK TCGA-B6-A0IM 
       57.37        54.18        51.75        40.64        42.84       126.12 
TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0RG TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0WT 
       84.59       110.14        68.45        81.17        78.02       177.40 
TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A1KC TCGA-BH-A0AU 
       79.63        17.95        28.24        68.94        43.59        24.53 
TCGA-BH-A0B4 TCGA-BH-A0B8 TCGA-BH-A0BC TCGA-BH-A0BZ TCGA-BH-A0C7 TCGA-BH-A0DD 
       39.16        51.58        32.02        49.05        42.90        45.80 
TCGA-BH-A0DE TCGA-BH-A0DK TCGA-BH-A0E2 TCGA-BH-A0EI TCGA-BH-A0GZ TCGA-BH-A0H0 
       31.17        13.91        12.36        24.43        10.78        15.16 
TCGA-BH-A0H7 TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HL TCGA-BH-A0HW 
       23.05        41.00        28.14        26.50         2.37        51.29 
TCGA-BH-A0HX TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A1ES TCGA-BH-A1EW TCGA-BH-A1F5 
       27.25        26.66        37.74       113.82        55.69        89.16 
TCGA-BH-A1F8 TCGA-BH-A1FG TCGA-BH-A1FM TCGA-BH-A1FR TCGA-BH-A204 TCGA-C8-A1HN 
       24.62       122.89        45.63       144.59        83.31         0.07 
TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A27A TCGA-C8-A3M8 TCGA-D8-A13Y TCGA-D8-A140 
        0.13         0.20        12.20         0.23         8.68         0.89 
TCGA-D8-A1JC TCGA-D8-A1JI TCGA-D8-A1X5 TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XD 
        5.85         0.69         5.62        12.49         9.01         5.10 
TCGA-D8-A1XF TCGA-D8-A1XG TCGA-D8-A1XZ TCGA-D8-A1Y0 TCGA-D8-A1Y3 TCGA-D8-A27R 
        6.48         6.44         3.95         5.46         4.08         2.96 
TCGA-D8-A27W TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A14S 
        0.49        38.24        51.12        38.53        11.57        27.42 
TCGA-E2-A14T TCGA-E2-A14W TCGA-E2-A155 TCGA-E2-A15A TCGA-E2-A15F TCGA-E2-A15O 
       29.26        27.39        18.18        16.50        15.39        12.99 
TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1L7 
       10.85         9.01         8.78        32.32        24.82        20.81 
TCGA-E2-A1LA TCGA-E9-A1R2 TCGA-E9-A1R4 TCGA-E9-A1R5 TCGA-E9-A1R6 TCGA-E9-A1R7 
       15.22         0.62         0.95         1.38         2.76         1.12 
TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A245 TCGA-E9-A247 TCGA-E9-A295 TCGA-E9-A2JS 
        1.55         1.25         0.82         0.39         0.69         0.43 
TCGA-EW-A1J1 TCGA-EW-A1J6 TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ TCGA-EW-A1P0 
        9.27        19.56        18.48        19.50        30.94        36.85 
TCGA-EW-A1PA TCGA-EW-A1PD TCGA-EW-A1PF TCGA-EW-A2FS TCGA-EW-A2FW TCGA-GI-A2C8 
        8.78         5.72         4.57        38.56         6.25         6.97 
TCGA-GM-A2DC TCGA-GM-A2DK TCGA-GM-A2DO TCGA-GM-A3NW 
       53.52        62.33        53.33        98.04 

$subtype6
TCGA-A2-A0CK TCGA-A2-A0CO TCGA-A2-A0EW TCGA-A2-A0SY TCGA-A7-A0CG TCGA-A8-A07J 
      125.56       112.04        25.32        37.94         5.46        12.00 
TCGA-AC-A2FO TCGA-AC-A3BB TCGA-AC-A3HN TCGA-AC-A3W6 TCGA-AN-A0FN TCGA-AN-A0FS 
       50.70         0.99         0.69         1.68         7.17         6.28 
TCGA-AN-A0XL TCGA-AO-A0J5 TCGA-AO-A0J9 TCGA-AO-A0JJ TCGA-AO-A12E TCGA-AR-A1AN 
        0.33        24.16        41.26        49.71        57.27        43.69 
TCGA-AR-A24O TCGA-AR-A2LN TCGA-AR-A2LQ TCGA-BH-A0AY TCGA-BH-A0B0 TCGA-BH-A0BM 
       65.65        17.06        16.96        25.55        46.92        36.72 
TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0C3 TCGA-BH-A0DQ TCGA-BH-A0DV TCGA-BH-A0HK 
       35.67        48.69        48.13         3.22        45.17         5.85 
TCGA-BH-A18F TCGA-BH-A1EU TCGA-D8-A145 TCGA-D8-A1JU TCGA-D8-A1XM TCGA-D8-A27G 
        8.81        42.28         1.61         3.48         7.17         6.87 
TCGA-E2-A108 TCGA-E2-A15M TCGA-E2-A1B5 TCGA-E2-A1BC TCGA-E9-A2JT TCGA-EW-A3E8 
        4.08         7.69        25.45         9.76         0.76        21.27 
TCGA-GM-A2DA TCGA-GM-A2DL TCGA-LL-A440 
      194.27        90.81         0.66 

$subtype7
TCGA-A2-A0CL TCGA-A2-A0EQ TCGA-A2-A25D TCGA-AO-A03O TCGA-AO-A0JC TCGA-AR-A1AW 
       60.07        67.50         7.99        81.63        50.86        35.24 
TCGA-BH-A0B6 TCGA-BH-A0BF TCGA-BH-A209 TCGA-C8-A1HM TCGA-D8-A1XL TCGA-D8-A1Y2 
       56.94        25.68       130.16         0.20        10.49         2.37 
TCGA-E2-A14Z TCGA-E2-A1IH TCGA-EW-A1OV 
       17.03        21.63        17.16 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 
    0.07     0.07     0.23     0.03     0.07     0.33     0.20 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 
  211.53   157.41   223.40   188.98   177.40   194.27   130.16 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 
  19.990   31.725   13.480   20.040   18.330   21.270   25.680 
[1] "0.1 - 211.5 (20.0)" "0.1 - 157.4 (31.7)" "0.2 - 223.4 (13.5)"
[4] "0.0 - 189.0 (20.0)" "0.1 - 177.4 (18.3)" "0.3 - 194.3 (21.3)"
[7] "0.2 - 130.2 (25.7)"
  [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
  [7] "subtype4" "subtype5" "subtype1" "subtype4" "subtype4" "subtype1"
 [13] "subtype1" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
 [19] "subtype1" "subtype1" "subtype5" "subtype4" "subtype4" "subtype5"
 [25] "subtype6" "subtype7" "subtype1" "subtype6" "subtype2" "subtype3"
 [31] "subtype3" "subtype5" "subtype5" "subtype2" "subtype5" "subtype4"
 [37] "subtype1" "subtype2" "subtype1" "subtype4" "subtype1" "subtype3"
 [43] "subtype5" "subtype3" "subtype3" "subtype2" "subtype7" "subtype5"
 [49] "subtype2" "subtype5" "subtype5" "subtype3" "subtype6" "subtype2"
 [55] "subtype4" "subtype1" "subtype2" "subtype4" "subtype4" "subtype1"
 [61] "subtype6" "subtype1" "subtype4" "subtype1" "subtype5" "subtype5"
 [67] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
 [73] "subtype3" "subtype4" "subtype5" "subtype3" "subtype1" "subtype2"
 [79] "subtype2" "subtype1" "subtype5" "subtype5" "subtype5" "subtype5"
 [85] "subtype3" "subtype2" "subtype1" "subtype5" "subtype2" "subtype2"
 [91] "subtype2" "subtype5" "subtype5" "subtype7" "subtype5" "subtype1"
 [97] "subtype2" "subtype2" "subtype4" "subtype1" "subtype4" "subtype1"
[103] "subtype5" "subtype1" "subtype6" "subtype3" "subtype3" "subtype5"
[109] "subtype1" "subtype3" "subtype1" "subtype1" "subtype5" "subtype3"
[115] "subtype2" "subtype3" "subtype4" "subtype1" "subtype3" "subtype1"
[121] "subtype5" "subtype3" "subtype1" "subtype5" "subtype1" "subtype3"
[127] "subtype5" "subtype5" "subtype3" "subtype4" "subtype4" "subtype3"
[133] "subtype4" "subtype5" "subtype1" "subtype5" "subtype4" "subtype4"
[139] "subtype5" "subtype4" "subtype1" "subtype4" "subtype3" "subtype3"
[145] "subtype4" "subtype6" "subtype5" "subtype1" "subtype5" "subtype1"
[151] "subtype3" "subtype1" "subtype5" "subtype5" "subtype4" "subtype5"
[157] "subtype5" "subtype4" "subtype3" "subtype5" "subtype5" "subtype5"
[163] "subtype4" "subtype4" "subtype5" "subtype4" "subtype1" "subtype3"
[169] "subtype3" "subtype1" "subtype3" "subtype5" "subtype4" "subtype3"
[175] "subtype3" "subtype4" "subtype3" "subtype5" "subtype3" "subtype3"
[181] "subtype5" "subtype4" "subtype5" "subtype5" "subtype3" "subtype5"
[187] "subtype5" "subtype3" "subtype3" "subtype4" "subtype4" "subtype3"
[193] "subtype3" "subtype2" "subtype2" "subtype4" "subtype3" "subtype3"
[199] "subtype3" "subtype4" "subtype3" "subtype2" "subtype4" "subtype3"
[205] "subtype1" "subtype5" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype5" "subtype6" "subtype1" "subtype3" "subtype1" "subtype6"
[217] "subtype6" "subtype2" "subtype2" "subtype3" "subtype6" "subtype2"
[223] "subtype3" "subtype5" "subtype3" "subtype5" "subtype3" "subtype5"
[229] "subtype5" "subtype4" "subtype1" "subtype4" "subtype5" "subtype1"
[235] "subtype1" "subtype4" "subtype1" "subtype5" "subtype3" "subtype1"
[241] "subtype3" "subtype1" "subtype6" "subtype6" "subtype4" "subtype4"
[247] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype6"
[253] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype5"
[259] "subtype1" "subtype3" "subtype5" "subtype4" "subtype5" "subtype4"
[265] "subtype7" "subtype5" "subtype2" "subtype5" "subtype1" "subtype5"
[271] "subtype4" "subtype5" "subtype1" "subtype6" "subtype1" "subtype5"
[277] "subtype3" "subtype6" "subtype4" "subtype7" "subtype4" "subtype4"
[283] "subtype3" "subtype5" "subtype5" "subtype6" "subtype1" "subtype4"
[289] "subtype1" "subtype3" "subtype5" "subtype1" "subtype1" "subtype3"
[295] "subtype3" "subtype5" "subtype4" "subtype6" "subtype1" "subtype3"
[301] "subtype5" "subtype2" "subtype5" "subtype5" "subtype1" "subtype5"
[307] "subtype5" "subtype5" "subtype1" "subtype4" "subtype4" "subtype3"
[313] "subtype3" "subtype1" "subtype5" "subtype3" "subtype1" "subtype5"
[319] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
[325] "subtype1" "subtype5" "subtype5" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype2" "subtype2" "subtype6" "subtype2" "subtype3"
[337] "subtype1" "subtype1" "subtype3" "subtype5" "subtype3" "subtype7"
[343] "subtype2" "subtype1" "subtype5" "subtype3" "subtype5" "subtype3"
[349] "subtype3" "subtype6" "subtype3" "subtype1" "subtype5" "subtype3"
[355] "subtype2" "subtype4" "subtype5" "subtype2" "subtype3" "subtype5"
[361] "subtype4" "subtype1" "subtype5" "subtype4" "subtype3" "subtype1"
[367] "subtype3" "subtype2" "subtype5" "subtype3" "subtype3" "subtype6"
[373] "subtype2" "subtype6" "subtype1" "subtype1" "subtype1" "subtype3"
[379] "subtype1" "subtype4" "subtype4" "subtype3" "subtype3" "subtype3"
[385] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype5"
[391] "subtype5" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
[397] "subtype4" "subtype3" "subtype5" "subtype5" "subtype3" "subtype4"
[403] "subtype3" "subtype2" "subtype4" "subtype1" "subtype1" "subtype2"
[409] "subtype3" "subtype5" "subtype5" "subtype5" "subtype1" "subtype2"
[415] "subtype3" "subtype3" "subtype1" "subtype5" "subtype5" "subtype3"
[421] "subtype5" "subtype1" "subtype3" "subtype4" "subtype3" "subtype5"
[427] "subtype1" "subtype4" "subtype6" "subtype2" "subtype6" "subtype2"
[433] "subtype1" "subtype5" "subtype3" "subtype7" "subtype4" "subtype5"
[439] "subtype1" "subtype4" "subtype5" "subtype3" "subtype7" "subtype1"
[445] "subtype3" "subtype1" "subtype6" "subtype6" "subtype6" "subtype3"
[451] "subtype4" "subtype3" "subtype3" "subtype3" "subtype1" "subtype5"
[457] "subtype4" "subtype3" "subtype6" "subtype5" "subtype5" "subtype5"
[463] "subtype4" "subtype3" "subtype2" "subtype5" "subtype1" "subtype2"
[469] "subtype3" "subtype6" "subtype3" "subtype3" "subtype6" "subtype4"
[475] "subtype4" "subtype1" "subtype3" "subtype5" "subtype1" "subtype3"
[481] "subtype2" "subtype3" "subtype3" "subtype4" "subtype5" "subtype4"
[487] "subtype5" "subtype5" "subtype2" "subtype2" "subtype3" "subtype5"
[493] "subtype5" "subtype5" "subtype5" "subtype3" "subtype3" "subtype6"
[499] "subtype5" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[505] "subtype5" "subtype5" "subtype4" "subtype1" "subtype3" "subtype3"
[511] "subtype3" "subtype3" "subtype1" "subtype6" "subtype1" "subtype3"
[517] "subtype4" "subtype4" "subtype5" "subtype3" "subtype5" "subtype4"
[523] "subtype1" "subtype4" "subtype3" "subtype1" "subtype4" "subtype1"
[529] "subtype4" "subtype3" "subtype5" "subtype3" "subtype6" "subtype4"
[535] "subtype5" "subtype4" "subtype4" "subtype1" "subtype4" "subtype5"
[541] "subtype1" "subtype5" "subtype2" "subtype1" "subtype3" "subtype2"
[547] "subtype5" "subtype2" "subtype3" "subtype3" "subtype5" "subtype1"
[553] "subtype5" "subtype4" "subtype2" "subtype4" "subtype4" "subtype5"
[559] "subtype4" "subtype7" "subtype2" "subtype3" "subtype4" "subtype4"
[565] "subtype2" "subtype1" "subtype4" "subtype4" "subtype7" "subtype5"
[571] "subtype3" "subtype3" "subtype4" "subtype4" "subtype5" "subtype5"
[577] "subtype4" "subtype4" "subtype4" "subtype5" "subtype1" "subtype4"
[583] "subtype5" "subtype5" "subtype4" "subtype5" "subtype3" "subtype1"
[589] "subtype1" "subtype6" "subtype3" "subtype1" "subtype4" "subtype4"
[595] "subtype4" "subtype5" "subtype3" "subtype3" "subtype4" "subtype4"
[601] "subtype3" "subtype5" "subtype4" "subtype4" "subtype1" "subtype1"
[607] "subtype4" "subtype3" "subtype3" "subtype3" "subtype6" "subtype5"
[613] "subtype3" "subtype3" "subtype3" "subtype5" "subtype5" "subtype3"
[619] "subtype3" "subtype5" "subtype5" "subtype5" "subtype4" "subtype1"
[625] "subtype7" "subtype6" "subtype3" "subtype1" "subtype3" "subtype3"
[631] "subtype4" "subtype3" "subtype3" "subtype1" "subtype3" "subtype5"
[637] "subtype5" "subtype3" "subtype7" "subtype5" "subtype3" "subtype1"
[643] "subtype6" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[649] "subtype4" "subtype3" "subtype5" "subtype3" "subtype2" "subtype5"
[655] "subtype5" "subtype5" "subtype4" "subtype6" "subtype5" "subtype5"
[661] "subtype3" "subtype4" "subtype3" "subtype3" "subtype1" "subtype3"
[667] "subtype4" "subtype2" "subtype1" "subtype5" "subtype5" "subtype2"
[673] "subtype4" "subtype5" "subtype1" "subtype1" "subtype7" "subtype1"
[679] "subtype4" "subtype3" "subtype3" "subtype5" "subtype3" "subtype1"
[685] "subtype1" "subtype5" "subtype3" "subtype3" "subtype2" "subtype5"
[691] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[697] "subtype6" "subtype5" "subtype3" "subtype5" "subtype5" "subtype5"
[703] "subtype1" "subtype4" "subtype2" "subtype3" "subtype6" "subtype6"
[709] "subtype3" "subtype5" "subtype2" "subtype5" "subtype7" "subtype1"
[715] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[721] "subtype3" "subtype5" "subtype3" "subtype3" "subtype5" "subtype4"
[727] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[733] "subtype1" "subtype3" "subtype3" "subtype3" "subtype5" "subtype3"
[739] "subtype5" "subtype5" "subtype5" "subtype5" "subtype3" "subtype3"
[745] "subtype3" "subtype5" "subtype5" "subtype4" "subtype3" "subtype4"
[751] "subtype3" "subtype1" "subtype1" "subtype5" "subtype5" "subtype4"
[757] "subtype3" "subtype3" "subtype5" "subtype5" "subtype6" "subtype3"
[763] "subtype3" "subtype2" "subtype3" "subtype3" "subtype5" "subtype3"
[769] "subtype3" "subtype3" "subtype5" "subtype7" "subtype1" "subtype5"
[775] "subtype5" "subtype5" "subtype5" "subtype3" "subtype1" "subtype3"
[781] "subtype3" "subtype1" "subtype1" "subtype5" "subtype1" "subtype4"
[787] "subtype5" "subtype3" "subtype5" "subtype2" "subtype1" "subtype4"
[793] "subtype5" "subtype2" "subtype5" "subtype6" "subtype1" "subtype5"
[799] "subtype1" "subtype3" "subtype6" "subtype4" "subtype5" "subtype4"
[805] "subtype1" "subtype4" "subtype2" "subtype5" "subtype6" "subtype3"
[811] "subtype3" "subtype5" "subtype5" "subtype3" "subtype2" "subtype1"
[817] "subtype3" "subtype6" "subtype1"
  [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
  [7] "subtype4" "subtype5" "subtype1" "subtype4" "subtype4" "subtype1"
 [13] "subtype1" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
 [19] "subtype1" "subtype1" "subtype5" "subtype4" "subtype4" "subtype5"
 [25] "subtype6" "subtype7" "subtype1" "subtype6" "subtype2" "subtype3"
 [31] "subtype3" "subtype5" "subtype5" "subtype2" "subtype5" "subtype4"
 [37] "subtype1" "subtype2" "subtype1" "subtype4" "subtype1" "subtype3"
 [43] "subtype5" "subtype3" "subtype3" "subtype2" "subtype7" "subtype5"
 [49] "subtype2" "subtype5" "subtype5" "subtype3" "subtype6" "subtype2"
 [55] "subtype4" "subtype1" "subtype2" "subtype4" "subtype4" "subtype1"
 [61] "subtype6" "subtype1" "subtype4" "subtype1" "subtype5" "subtype5"
 [67] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
 [73] "subtype3" "subtype4" "subtype5" "subtype3" "subtype1" "subtype2"
 [79] "subtype2" "subtype1" "subtype5" "subtype5" "subtype5" "subtype5"
 [85] "subtype3" "subtype2" "subtype1" "subtype5" "subtype2" "subtype2"
 [91] "subtype2" "subtype5" "subtype5" "subtype7" "subtype5" "subtype1"
 [97] "subtype2" "subtype2" "subtype4" "subtype1" "subtype4" "subtype1"
[103] "subtype5" "subtype1" "subtype6" "subtype3" "subtype3" "subtype5"
[109] "subtype1" "subtype3" "subtype1" "subtype1" "subtype5" "subtype3"
[115] "subtype2" "subtype3" "subtype4" "subtype1" "subtype3" "subtype1"
[121] "subtype5" "subtype3" "subtype1" "subtype5" "subtype1" "subtype3"
[127] "subtype5" "subtype5" "subtype3" "subtype4" "subtype4" "subtype3"
[133] "subtype4" "subtype5" "subtype1" "subtype5" "subtype4" "subtype4"
[139] "subtype5" "subtype4" "subtype1" "subtype4" "subtype3" "subtype3"
[145] "subtype4" "subtype6" "subtype5" "subtype1" "subtype5" "subtype1"
[151] "subtype3" "subtype1" "subtype5" "subtype5" "subtype4" "subtype5"
[157] "subtype5" "subtype4" "subtype3" "subtype5" "subtype5" "subtype5"
[163] "subtype4" "subtype4" "subtype5" "subtype4" "subtype1" "subtype3"
[169] "subtype3" "subtype1" "subtype3" "subtype5" "subtype4" "subtype3"
[175] "subtype3" "subtype4" "subtype3" "subtype5" "subtype3" "subtype3"
[181] "subtype5" "subtype4" "subtype5" "subtype5" "subtype3" "subtype5"
[187] "subtype5" "subtype3" "subtype3" "subtype4" "subtype4" "subtype3"
[193] "subtype3" "subtype2" "subtype2" "subtype4" "subtype3" "subtype3"
[199] "subtype3" "subtype4" "subtype3" "subtype2" "subtype4" "subtype3"
[205] "subtype1" "subtype5" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype5" "subtype6" "subtype1" "subtype3" "subtype1" "subtype6"
[217] "subtype6" "subtype2" "subtype2" "subtype3" "subtype6" "subtype2"
[223] "subtype3" "subtype5" "subtype3" "subtype5" "subtype3" "subtype5"
[229] "subtype5" "subtype4" "subtype1" "subtype4" "subtype5" "subtype1"
[235] "subtype1" "subtype4" "subtype1" "subtype5" "subtype3" "subtype1"
[241] "subtype3" "subtype1" "subtype6" "subtype6" "subtype4" "subtype4"
[247] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype6"
[253] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype5"
[259] "subtype1" "subtype3" "subtype5" "subtype4" "subtype5" "subtype4"
[265] "subtype7" "subtype5" "subtype2" "subtype5" "subtype1" "subtype5"
[271] "subtype4" "subtype5" "subtype1" "subtype6" "subtype1" "subtype5"
[277] "subtype3" "subtype6" "subtype4" "subtype7" "subtype4" "subtype4"
[283] "subtype3" "subtype5" "subtype5" "subtype6" "subtype1" "subtype4"
[289] "subtype1" "subtype3" "subtype5" "subtype1" "subtype1" "subtype3"
[295] "subtype3" "subtype5" "subtype4" "subtype6" "subtype1" "subtype3"
[301] "subtype5" "subtype2" "subtype5" "subtype5" "subtype1" "subtype5"
[307] "subtype5" "subtype5" "subtype1" "subtype4" "subtype4" "subtype3"
[313] "subtype3" "subtype1" "subtype5" "subtype3" "subtype1" "subtype5"
[319] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
[325] "subtype1" "subtype5" "subtype5" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype2" "subtype2" "subtype6" "subtype2" "subtype3"
[337] "subtype1" "subtype1" "subtype3" "subtype5" "subtype3" "subtype7"
[343] "subtype2" "subtype1" "subtype5" "subtype3" "subtype5" "subtype3"
[349] "subtype3" "subtype6" "subtype3" "subtype1" "subtype5" "subtype3"
[355] "subtype2" "subtype4" "subtype5" "subtype2" "subtype3" "subtype5"
[361] "subtype4" "subtype1" "subtype5" "subtype4" "subtype3" "subtype1"
[367] "subtype3" "subtype2" "subtype5" "subtype3" "subtype3" "subtype6"
[373] "subtype2" "subtype6" "subtype1" "subtype1" "subtype1" "subtype3"
[379] "subtype1" "subtype4" "subtype4" "subtype3" "subtype3" "subtype3"
[385] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype5"
[391] "subtype5" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
[397] "subtype4" "subtype3" "subtype5" "subtype5" "subtype3" "subtype4"
[403] "subtype3" "subtype2" "subtype4" "subtype1" "subtype1" "subtype2"
[409] "subtype3" "subtype5" "subtype5" "subtype5" "subtype1" "subtype2"
[415] "subtype3" "subtype3" "subtype1" "subtype5" "subtype5" "subtype3"
[421] "subtype5" "subtype1" "subtype3" "subtype4" "subtype3" "subtype5"
[427] "subtype1" "subtype4" "subtype6" "subtype2" "subtype6" "subtype2"
[433] "subtype1" "subtype5" "subtype3" "subtype7" "subtype4" "subtype5"
[439] "subtype1" "subtype4" "subtype5" "subtype3" "subtype7" "subtype1"
[445] "subtype3" "subtype1" "subtype6" "subtype6" "subtype6" "subtype3"
[451] "subtype4" "subtype3" "subtype3" "subtype3" "subtype1" "subtype5"
[457] "subtype4" "subtype3" "subtype6" "subtype5" "subtype5" "subtype5"
[463] "subtype4" "subtype3" "subtype2" "subtype5" "subtype1" "subtype2"
[469] "subtype3" "subtype6" "subtype3" "subtype3" "subtype6" "subtype4"
[475] "subtype4" "subtype1" "subtype3" "subtype5" "subtype1" "subtype3"
[481] "subtype2" "subtype3" "subtype3" "subtype4" "subtype5" "subtype4"
[487] "subtype5" "subtype5" "subtype2" "subtype2" "subtype3" "subtype5"
[493] "subtype5" "subtype5" "subtype5" "subtype3" "subtype3" "subtype6"
[499] "subtype5" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[505] "subtype5" "subtype5" "subtype4" "subtype1" "subtype3" "subtype3"
[511] "subtype3" "subtype3" "subtype1" "subtype6" "subtype1" "subtype3"
[517] "subtype4" "subtype4" "subtype5" "subtype3" "subtype5" "subtype4"
[523] "subtype1" "subtype4" "subtype3" "subtype1" "subtype4" "subtype1"
[529] "subtype4" "subtype3" "subtype5" "subtype3" "subtype6" "subtype4"
[535] "subtype5" "subtype4" "subtype4" "subtype1" "subtype4" "subtype5"
[541] "subtype1" "subtype5" "subtype2" "subtype1" "subtype3" "subtype2"
[547] "subtype5" "subtype2" "subtype3" "subtype3" "subtype5" "subtype1"
[553] "subtype5" "subtype4" "subtype2" "subtype4" "subtype4" "subtype5"
[559] "subtype4" "subtype7" "subtype2" "subtype3" "subtype4" "subtype4"
[565] "subtype2" "subtype1" "subtype4" "subtype4" "subtype7" "subtype5"
[571] "subtype3" "subtype3" "subtype4" "subtype4" "subtype5" "subtype5"
[577] "subtype4" "subtype4" "subtype4" "subtype5" "subtype1" "subtype4"
[583] "subtype5" "subtype5" "subtype4" "subtype5" "subtype3" "subtype1"
[589] "subtype1" "subtype6" "subtype3" "subtype1" "subtype4" "subtype4"
[595] "subtype4" "subtype5" "subtype3" "subtype3" "subtype4" "subtype4"
[601] "subtype3" "subtype5" "subtype4" "subtype4" "subtype1" "subtype1"
[607] "subtype4" "subtype3" "subtype3" "subtype3" "subtype6" "subtype5"
[613] "subtype3" "subtype3" "subtype3" "subtype5" "subtype5" "subtype3"
[619] "subtype3" "subtype5" "subtype5" "subtype5" "subtype4" "subtype1"
[625] "subtype7" "subtype6" "subtype3" "subtype1" "subtype3" "subtype3"
[631] "subtype4" "subtype3" "subtype3" "subtype1" "subtype3" "subtype5"
[637] "subtype5" "subtype3" "subtype7" "subtype5" "subtype3" "subtype1"
[643] "subtype6" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[649] "subtype4" "subtype3" "subtype5" "subtype3" "subtype2" "subtype5"
[655] "subtype5" "subtype5" "subtype4" "subtype6" "subtype5" "subtype5"
[661] "subtype3" "subtype4" "subtype3" "subtype3" "subtype1" "subtype3"
[667] "subtype4" "subtype2" "subtype1" "subtype5" "subtype5" "subtype2"
[673] "subtype4" "subtype5" "subtype1" "subtype1" "subtype7" "subtype1"
[679] "subtype4" "subtype3" "subtype3" "subtype5" "subtype3" "subtype1"
[685] "subtype1" "subtype5" "subtype3" "subtype3" "subtype2" "subtype5"
[691] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[697] "subtype6" "subtype5" "subtype3" "subtype5" "subtype5" "subtype5"
[703] "subtype1" "subtype4" "subtype2" "subtype3" "subtype6" "subtype6"
[709] "subtype3" "subtype5" "subtype2" "subtype5" "subtype7" "subtype1"
[715] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[721] "subtype3" "subtype5" "subtype3" "subtype3" "subtype5" "subtype4"
[727] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[733] "subtype1" "subtype3" "subtype3" "subtype3" "subtype5" "subtype3"
[739] "subtype5" "subtype5" "subtype5" "subtype5" "subtype3" "subtype3"
[745] "subtype3" "subtype5" "subtype5" "subtype4" "subtype3" "subtype4"
[751] "subtype3" "subtype1" "subtype1" "subtype5" "subtype5" "subtype4"
[757] "subtype3" "subtype3" "subtype5" "subtype5" "subtype6" "subtype3"
[763] "subtype3" "subtype2" "subtype3" "subtype3" "subtype5" "subtype3"
[769] "subtype3" "subtype3" "subtype5" "subtype7" "subtype1" "subtype5"
[775] "subtype5" "subtype5" "subtype5" "subtype3" "subtype1" "subtype3"
[781] "subtype3" "subtype1" "subtype1" "subtype5" "subtype1" "subtype4"
[787] "subtype5" "subtype3" "subtype5" "subtype2" "subtype1" "subtype4"
[793] "subtype5" "subtype2" "subtype5" "subtype6" "subtype1" "subtype5"
[799] "subtype1" "subtype3" "subtype6" "subtype4" "subtype5" "subtype4"
[805] "subtype1" "subtype4" "subtype2" "subtype5" "subtype6" "subtype3"
[811] "subtype3" "subtype5" "subtype5" "subtype3" "subtype2" "subtype1"
[817] "subtype3" "subtype6" "subtype1"
  [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
  [7] "subtype4" "subtype5" "subtype1" "subtype4" "subtype4" "subtype1"
 [13] "subtype1" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
 [19] "subtype1" "subtype1" "subtype5" "subtype4" "subtype4" "subtype5"
 [25] "subtype6" "subtype7" "subtype1" "subtype6" "subtype2" "subtype3"
 [31] "subtype3" "subtype5" "subtype5" "subtype2" "subtype5" "subtype4"
 [37] "subtype1" "subtype2" "subtype1" "subtype4" "subtype1" "subtype3"
 [43] "subtype5" "subtype3" "subtype3" "subtype2" "subtype7" "subtype5"
 [49] "subtype2" "subtype5" "subtype5" "subtype3" "subtype6" "subtype2"
 [55] "subtype4" "subtype1" "subtype2" "subtype4" "subtype4" "subtype1"
 [61] "subtype6" "subtype1" "subtype4" "subtype1" "subtype5" "subtype5"
 [67] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
 [73] "subtype3" "subtype4" "subtype5" "subtype3" "subtype1" "subtype2"
 [79] "subtype2" "subtype1" "subtype5" "subtype5" "subtype5" "subtype5"
 [85] "subtype3" "subtype2" "subtype1" "subtype5" "subtype2" "subtype2"
 [91] "subtype2" "subtype5" "subtype5" "subtype7" "subtype5" "subtype1"
 [97] "subtype2" "subtype2" "subtype4" "subtype1" "subtype4" "subtype1"
[103] "subtype5" "subtype1" "subtype6" "subtype3" "subtype3" "subtype5"
[109] "subtype1" "subtype3" "subtype1" "subtype1" "subtype5" "subtype3"
[115] "subtype2" "subtype3" "subtype4" "subtype1" "subtype3" "subtype1"
[121] "subtype5" "subtype3" "subtype1" "subtype5" "subtype1" "subtype3"
[127] "subtype5" "subtype5" "subtype3" "subtype4" "subtype4" "subtype3"
[133] "subtype4" "subtype5" "subtype1" "subtype5" "subtype4" "subtype4"
[139] "subtype5" "subtype4" "subtype1" "subtype4" "subtype3" "subtype3"
[145] "subtype4" "subtype6" "subtype5" "subtype1" "subtype5" "subtype1"
[151] "subtype3" "subtype1" "subtype5" "subtype5" "subtype4" "subtype5"
[157] "subtype5" "subtype4" "subtype3" "subtype5" "subtype5" "subtype5"
[163] "subtype4" "subtype4" "subtype5" "subtype4" "subtype1" "subtype3"
[169] "subtype3" "subtype1" "subtype3" "subtype5" "subtype4" "subtype3"
[175] "subtype3" "subtype4" "subtype3" "subtype5" "subtype3" "subtype3"
[181] "subtype5" "subtype4" "subtype5" "subtype5" "subtype3" "subtype5"
[187] "subtype5" "subtype3" "subtype3" "subtype4" "subtype4" "subtype3"
[193] "subtype3" "subtype2" "subtype2" "subtype4" "subtype3" "subtype3"
[199] "subtype3" "subtype4" "subtype3" "subtype2" "subtype4" "subtype3"
[205] "subtype1" "subtype5" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype5" "subtype6" "subtype1" "subtype3" "subtype1" "subtype6"
[217] "subtype6" "subtype2" "subtype2" "subtype3" "subtype6" "subtype2"
[223] "subtype3" "subtype5" "subtype3" "subtype5" "subtype3" "subtype5"
[229] "subtype5" "subtype4" "subtype1" "subtype4" "subtype5" "subtype1"
[235] "subtype1" "subtype4" "subtype1" "subtype5" "subtype3" "subtype1"
[241] "subtype3" "subtype1" "subtype6" "subtype6" "subtype4" "subtype4"
[247] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype6"
[253] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype5"
[259] "subtype1" "subtype3" "subtype5" "subtype4" "subtype5" "subtype4"
[265] "subtype7" "subtype5" "subtype2" "subtype5" "subtype1" "subtype5"
[271] "subtype4" "subtype5" "subtype1" "subtype6" "subtype1" "subtype5"
[277] "subtype3" "subtype6" "subtype4" "subtype7" "subtype4" "subtype4"
[283] "subtype3" "subtype5" "subtype5" "subtype6" "subtype1" "subtype4"
[289] "subtype1" "subtype3" "subtype5" "subtype1" "subtype1" "subtype3"
[295] "subtype3" "subtype5" "subtype4" "subtype6" "subtype1" "subtype3"
[301] "subtype5" "subtype2" "subtype5" "subtype5" "subtype1" "subtype5"
[307] "subtype5" "subtype5" "subtype1" "subtype4" "subtype4" "subtype3"
[313] "subtype3" "subtype1" "subtype5" "subtype3" "subtype1" "subtype5"
[319] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
[325] "subtype1" "subtype5" "subtype5" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype2" "subtype2" "subtype6" "subtype2" "subtype3"
[337] "subtype1" "subtype1" "subtype3" "subtype5" "subtype3" "subtype7"
[343] "subtype2" "subtype1" "subtype5" "subtype3" "subtype5" "subtype3"
[349] "subtype3" "subtype6" "subtype3" "subtype1" "subtype5" "subtype3"
[355] "subtype2" "subtype4" "subtype5" "subtype2" "subtype3" "subtype5"
[361] "subtype4" "subtype1" "subtype5" "subtype4" "subtype3" "subtype1"
[367] "subtype3" "subtype2" "subtype5" "subtype3" "subtype3" "subtype6"
[373] "subtype2" "subtype6" "subtype1" "subtype1" "subtype1" "subtype3"
[379] "subtype1" "subtype4" "subtype4" "subtype3" "subtype3" "subtype3"
[385] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype5"
[391] "subtype5" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
[397] "subtype4" "subtype3" "subtype5" "subtype5" "subtype3" "subtype4"
[403] "subtype3" "subtype2" "subtype4" "subtype1" "subtype1" "subtype2"
[409] "subtype3" "subtype5" "subtype5" "subtype5" "subtype1" "subtype2"
[415] "subtype3" "subtype3" "subtype1" "subtype5" "subtype5" "subtype3"
[421] "subtype5" "subtype1" "subtype3" "subtype4" "subtype3" "subtype5"
[427] "subtype1" "subtype4" "subtype6" "subtype2" "subtype6" "subtype2"
[433] "subtype1" "subtype5" "subtype3" "subtype7" "subtype4" "subtype5"
[439] "subtype1" "subtype4" "subtype5" "subtype3" "subtype7" "subtype1"
[445] "subtype3" "subtype1" "subtype6" "subtype6" "subtype6" "subtype3"
[451] "subtype4" "subtype3" "subtype3" "subtype3" "subtype1" "subtype5"
[457] "subtype4" "subtype3" "subtype6" "subtype5" "subtype5" "subtype5"
[463] "subtype4" "subtype3" "subtype2" "subtype5" "subtype1" "subtype2"
[469] "subtype3" "subtype6" "subtype3" "subtype3" "subtype6" "subtype4"
[475] "subtype4" "subtype1" "subtype3" "subtype5" "subtype1" "subtype3"
[481] "subtype2" "subtype3" "subtype3" "subtype4" "subtype5" "subtype4"
[487] "subtype5" "subtype5" "subtype2" "subtype2" "subtype3" "subtype5"
[493] "subtype5" "subtype5" "subtype5" "subtype3" "subtype3" "subtype6"
[499] "subtype5" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[505] "subtype5" "subtype5" "subtype4" "subtype1" "subtype3" "subtype3"
[511] "subtype3" "subtype3" "subtype1" "subtype6" "subtype1" "subtype3"
[517] "subtype4" "subtype4" "subtype5" "subtype3" "subtype5" "subtype4"
[523] "subtype1" "subtype4" "subtype3" "subtype1" "subtype4" "subtype1"
[529] "subtype4" "subtype3" "subtype5" "subtype3" "subtype6" "subtype4"
[535] "subtype5" "subtype4" "subtype4" "subtype1" "subtype4" "subtype5"
[541] "subtype1" "subtype5" "subtype2" "subtype1" "subtype3" "subtype2"
[547] "subtype5" "subtype2" "subtype3" "subtype3" "subtype5" "subtype1"
[553] "subtype5" "subtype4" "subtype2" "subtype4" "subtype4" "subtype5"
[559] "subtype4" "subtype7" "subtype2" "subtype3" "subtype4" "subtype4"
[565] "subtype2" "subtype1" "subtype4" "subtype4" "subtype7" "subtype5"
[571] "subtype3" "subtype3" "subtype4" "subtype4" "subtype5" "subtype5"
[577] "subtype4" "subtype4" "subtype4" "subtype5" "subtype1" "subtype4"
[583] "subtype5" "subtype5" "subtype4" "subtype5" "subtype3" "subtype1"
[589] "subtype1" "subtype6" "subtype3" "subtype1" "subtype4" "subtype4"
[595] "subtype4" "subtype5" "subtype3" "subtype3" "subtype4" "subtype4"
[601] "subtype3" "subtype5" "subtype4" "subtype4" "subtype1" "subtype1"
[607] "subtype4" "subtype3" "subtype3" "subtype3" "subtype6" "subtype5"
[613] "subtype3" "subtype3" "subtype3" "subtype5" "subtype5" "subtype3"
[619] "subtype3" "subtype5" "subtype5" "subtype5" "subtype4" "subtype1"
[625] "subtype7" "subtype6" "subtype3" "subtype1" "subtype3" "subtype3"
[631] "subtype4" "subtype3" "subtype3" "subtype1" "subtype3" "subtype5"
[637] "subtype5" "subtype3" "subtype7" "subtype5" "subtype3" "subtype1"
[643] "subtype6" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[649] "subtype4" "subtype3" "subtype5" "subtype3" "subtype2" "subtype5"
[655] "subtype5" "subtype5" "subtype4" "subtype6" "subtype5" "subtype5"
[661] "subtype3" "subtype4" "subtype3" "subtype3" "subtype1" "subtype3"
[667] "subtype4" "subtype2" "subtype1" "subtype5" "subtype5" "subtype2"
[673] "subtype4" "subtype5" "subtype1" "subtype1" "subtype7" "subtype1"
[679] "subtype4" "subtype3" "subtype3" "subtype5" "subtype3" "subtype1"
[685] "subtype1" "subtype5" "subtype3" "subtype3" "subtype2" "subtype5"
[691] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[697] "subtype6" "subtype5" "subtype3" "subtype5" "subtype5" "subtype5"
[703] "subtype1" "subtype4" "subtype2" "subtype3" "subtype6" "subtype6"
[709] "subtype3" "subtype5" "subtype2" "subtype5" "subtype7" "subtype1"
[715] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[721] "subtype3" "subtype5" "subtype3" "subtype3" "subtype5" "subtype4"
[727] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[733] "subtype1" "subtype3" "subtype3" "subtype3" "subtype5" "subtype3"
[739] "subtype5" "subtype5" "subtype5" "subtype5" "subtype3" "subtype3"
[745] "subtype3" "subtype5" "subtype5" "subtype4" "subtype3" "subtype4"
[751] "subtype3" "subtype1" "subtype1" "subtype5" "subtype5" "subtype4"
[757] "subtype3" "subtype3" "subtype5" "subtype5" "subtype6" "subtype3"
[763] "subtype3" "subtype2" "subtype3" "subtype3" "subtype5" "subtype3"
[769] "subtype3" "subtype3" "subtype5" "subtype7" "subtype1" "subtype5"
[775] "subtype5" "subtype5" "subtype5" "subtype3" "subtype1" "subtype3"
[781] "subtype3" "subtype1" "subtype1" "subtype5" "subtype1" "subtype4"
[787] "subtype5" "subtype3" "subtype5" "subtype2" "subtype1" "subtype4"
[793] "subtype5" "subtype2" "subtype5" "subtype6" "subtype1" "subtype5"
[799] "subtype1" "subtype3" "subtype6" "subtype4" "subtype5" "subtype4"
[805] "subtype1" "subtype4" "subtype2" "subtype5" "subtype6" "subtype3"
[811] "subtype3" "subtype5" "subtype5" "subtype3" "subtype2" "subtype1"
[817] "subtype3" "subtype6" "subtype1"
D7V2, continuous
D7V3, binary
          cls
clus         0   1
  subtype1 153   0
  subtype2  76   0
  subtype3 219   2
  subtype4 142   1
  subtype5 214   6
  subtype6  48   0
  subtype7  16   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  153    0
  subtype2   76    0
  subtype3  219    2
  subtype4  142    1
  subtype5  214    6
  subtype6   48    0
  subtype7   16    0
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                           136                              1
  subtype2                            37                             33
  subtype3                           151                             42
  subtype4                           131                              6
  subtype5                           189                             13
  subtype6                            25                             19
  subtype7                            13                              2
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   3                                0
  subtype2                   0                                4
  subtype3                   0                               11
  subtype4                   0                                2
  subtype5                   0                                5
  subtype6                   0                                3
  subtype7                   1                                0
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  2             11
  subtype2                  1              1
  subtype3                  3             14
  subtype4                  0              4
  subtype5                  4              9
  subtype6                  0              1
  subtype7                  0              0
D7V4, multiclass
D7V5, binary
          cls
clus         0   1
  subtype1  46 107
  subtype2  17  59
  subtype3  54 167
  subtype4  29 114
  subtype5  52 168
  subtype6  10  38
  subtype7   5  11
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   46  107
  subtype2   17   59
  subtype3   54  167
  subtype4   29  114
  subtype5   52  168
  subtype6   10   38
  subtype7    5   11
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 140   3  10
  subtype2        1  63   1  11
  subtype3        1 192   3  25
  subtype4        0 129   5   9
  subtype5        0 200   2  18
  subtype6        0  41   1   6
  subtype7        0  13   0   3
D7V6, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N0 (MOL+) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3B
  subtype1 63       4      31         0 16  13   5   1    1  6   6  1   4   1
  subtype2 13       5      11         0 10  15   5   0    5  2   3  3   4   0
  subtype3 68       8      35         1 17  42   6   1    6  9  12  5   7   0
  subtype4 34       1      15         0 23  19   6   0    1 14  12  5   8   0
  subtype5 48       3      35         0 32  34   9   0    9 18  16  4   6   0
  subtype6 22       1       5         0  6   6   1   0    0  1   4  1   1   0
  subtype7  8       0       3         0  0   1   0   0    2  0   1  0   1   0
          vv
clus       N3C NX
  subtype1   1  0
  subtype2   0  0
  subtype3   0  4
  subtype4   0  5
  subtype5   0  6
  subtype6   0  0
  subtype7   0  0
D7V7, multiclass
D7V8, continuous
D7V9, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      11       12        0        1        71        30         0
  subtype2      10        4        0        2        17        23         1
  subtype3      22       28        0        2        76        42         0
  subtype4       8        5        0        1        45        33         0
  subtype5      11       15        5        0        68        56         1
  subtype6       6        4        2        2        13        11         0
  subtype7       4        1        0        0         6         3         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         14          2          6        3         0       2
  subtype2         11          0          6        1         1       0
  subtype3         27          6          8        3         0       7
  subtype4         26          6         10        5         0       4
  subtype5         39         11          8        2         0       4
  subtype6          7          0          2        1         0       0
  subtype7          1          0          1        0         0       0
D7V10, multiclass

Clustering(8) Variable = MRNASEQ_CHIERARCHICAL
D8V1, survival
          sevent
clus2        0   1
  subtype1 172  31
  subtype2 182  14
  subtype3 369  51
subtype1 subtype2 subtype3 
     203      196      420 
subtype1 subtype2 subtype3 
      31       14       51 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SI TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P 
        8.52        20.84        31.79        28.01        19.17        17.98 
TCGA-A2-A04Q TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04W TCGA-A2-A0CM TCGA-A2-A0CX 
       41.92        64.11        22.03        63.06        24.79        42.84 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EY TCGA-A2-A0ST TCGA-A2-A0SX 
       21.14        25.84        25.02        15.95        54.02        42.35 
TCGA-A2-A0T0 TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM 
       11.08        10.59         7.96         8.28        10.72        21.73 
TCGA-A2-A1G1 TCGA-A2-A25F TCGA-A2-A3XV TCGA-A2-A3XX TCGA-A2-A3Y0 TCGA-A7-A0CE 
       12.20         3.72        14.07        38.40        28.21         8.32 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I 
       12.26         8.78         9.44         8.45         6.87         4.01 
TCGA-A8-A07C TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08L TCGA-A8-A08R 
       19.07         9.99         8.98         9.96         9.99         0.99 
TCGA-A8-A08X TCGA-A8-A09W TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AC-A23H TCGA-AC-A2BK 
       33.99         0.99        14.01         0.99         2.66        38.53 
TCGA-AC-A2QH TCGA-AC-A2QJ TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AT 
        1.02         2.27         1.78         1.71         6.48         0.33 
TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FV TCGA-AN-A0FX TCGA-AN-A0G0 TCGA-AN-A0XU 
        7.92         7.56         0.33         0.33         0.53         0.33 
TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JE TCGA-AO-A0JL 
       59.05        19.23         9.67        25.48        64.60        43.36 
TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F TCGA-AO-A1KR 
      102.54        94.59        96.10        64.04        48.36        70.36 
TCGA-AQ-A04J TCGA-AQ-A04L TCGA-AQ-A0Y5 TCGA-AR-A0TP TCGA-AR-A0TS TCGA-AR-A0TU 
        5.23       110.43         5.62        78.64        37.41        11.84 
TCGA-AR-A0TX TCGA-AR-A0U0 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ 
        0.49         0.26        53.49        75.55        61.84        52.73 
TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-AR-A24Q TCGA-AR-A24U 
       43.53        43.04        17.19        20.19        66.02        53.36 
TCGA-AR-A251 TCGA-AR-A254 TCGA-AR-A256 TCGA-AR-A2LH TCGA-AR-A2LR TCGA-B6-A0I1 
       45.14        39.85        93.83        20.22        20.38        77.62 
TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IQ TCGA-B6-A0RE 
      125.79        32.58       176.98        18.77       127.27       211.53 
TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX TCGA-B6-A0X1 TCGA-B6-A1KF 
      100.67        89.46       131.21        21.47       186.44       101.52 
TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BG 
       38.79        20.45        39.55        56.98        51.68        24.85 
TCGA-BH-A0BL TCGA-BH-A0BR TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A0DZ TCGA-BH-A0E0 
       44.02        53.65        11.67        48.23        16.27         4.37 
TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18Q 
        9.60        31.00         5.59        12.23         2.01        55.63 
TCGA-BH-A18T TCGA-BH-A18V TCGA-BH-A1EN TCGA-BH-A1EX TCGA-BH-A1F0 TCGA-BH-A1F2 
        7.36        51.12        67.46        49.58        25.81        31.53 
TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FU TCGA-BH-A203 TCGA-BH-A208 TCGA-C8-A137 
       97.48       114.12        72.07        38.60        57.83         0.85 
TCGA-C8-A1HJ TCGA-C8-A1HK TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A275 TCGA-C8-A278 
        0.16         0.23         0.36         0.43         0.03         0.03 
TCGA-C8-A27B TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 
        0.99         8.68         6.90         2.01         5.65         0.07 
TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL 
        8.15         0.59         3.16         6.15         3.58         8.71 
TCGA-D8-A1JM TCGA-D8-A1XK TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW TCGA-D8-A27F 
        7.82        10.72         5.82         6.35         3.85         7.46 
TCGA-D8-A27H TCGA-D8-A27M TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14X 
        4.60         4.73        44.38        16.01        27.78        22.75 
TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A152 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ 
       22.62        19.43        19.33        14.79        16.93        64.57 
TCGA-E2-A1B0 TCGA-E2-A1II TCGA-E2-A1LB TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH 
       41.79        27.95        31.96        28.90        11.51        94.52 
TCGA-E2-A1LI TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1RH TCGA-E9-A243 
       90.41         8.75        33.34         7.86         0.46         1.41 
TCGA-E9-A244 TCGA-E9-A248 TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P7 TCGA-EW-A1P8 
        0.66         0.69        15.22        16.47        20.88         7.86 
TCGA-EW-A1PB TCGA-EW-A1PH TCGA-EW-A2FR TCGA-EW-A3U0 TCGA-GI-A2C9 TCGA-GM-A2DB 
       19.99         4.57        36.82         7.53        23.11        53.10 
TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DH TCGA-GM-A3XL TCGA-LL-A441 
       43.04        42.71        42.28        56.45         2.99 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SH TCGA-A1-A0SJ TCGA-A2-A04Y 
       14.37        43.40        48.10        47.24        14.01        25.08 
TCGA-A2-A0CK TCGA-A2-A0CL TCGA-A2-A0CO TCGA-A2-A0CP TCGA-A2-A0CZ TCGA-A2-A0EN 
      125.56        60.07       112.04        82.03        43.99        82.68 
TCGA-A2-A0EO TCGA-A2-A0EQ TCGA-A2-A0ES TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX 
       71.70        67.50        32.91        17.92        25.32        18.05 
TCGA-A2-A0SU TCGA-A2-A0SY TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T6 TCGA-A2-A0T7 
       44.42        37.94        14.99        12.99        11.31        13.05 
TCGA-A2-A0YD TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1FW TCGA-A2-A1FZ TCGA-A2-A1G0 
       18.08        10.98         8.81         7.27        13.45        12.49 
TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25D TCGA-A2-A3KC TCGA-A2-A3KD 
        4.34        42.25        97.58         7.99        11.93        26.40 
TCGA-A2-A3XZ TCGA-A7-A0CG TCGA-A7-A0D9 TCGA-A7-A0DB TCGA-A7-A13H TCGA-A7-A3J1 
       31.96         5.46         5.23         4.60        18.12         2.47 
TCGA-A8-A07E TCGA-A8-A07J TCGA-A8-A08O TCGA-A8-A09A TCGA-A8-A09D TCGA-A8-A0A1 
       19.99        12.00        30.97         9.99        13.02        12.00 
TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-AC-A23G TCGA-AC-A2B8 TCGA-AC-A2FB TCGA-AC-A2FF 
       13.02        21.04        10.82         1.45         1.45        55.40 
TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FO TCGA-AC-A3BB TCGA-AC-A3HN TCGA-AC-A3OD 
       36.99        38.79        50.70         0.99         0.69         1.15 
TCGA-AC-A3QP TCGA-AC-A3W6 TCGA-AC-A3YI TCGA-AN-A046 TCGA-AN-A0FN TCGA-AN-A0FS 
        9.40         1.68         1.51         0.33         7.17         6.28 
TCGA-AN-A0FW TCGA-AN-A0XL TCGA-AO-A03M TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A03V 
        0.36         0.33        47.84        56.12        39.02        29.13 
TCGA-AO-A0J5 TCGA-AO-A0J9 TCGA-AO-A0JC TCGA-AO-A0JG TCGA-AO-A0JJ TCGA-AO-A12A 
       24.16        41.26        50.86        14.76        49.71        90.54 
TCGA-AO-A12E TCGA-AO-A1KO TCGA-AR-A0TQ TCGA-AR-A0TT TCGA-AR-A1AK TCGA-AR-A1AL 
       57.27        14.73        49.32        55.20        51.22        48.82 
TCGA-AR-A1AN TCGA-AR-A1AU TCGA-AR-A1AW TCGA-AR-A1AX TCGA-AR-A24O TCGA-AR-A24S 
       43.69        46.32        35.24        36.26        65.65        62.07 
TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A252 TCGA-AR-A255 TCGA-AR-A2LM TCGA-AR-A2LN 
       53.26        50.96        40.64        34.78        40.01        17.06 
TCGA-AR-A2LO TCGA-AR-A2LQ TCGA-B6-A0IE TCGA-B6-A0IH TCGA-B6-A0IN TCGA-B6-A0RQ 
       20.81        16.96        65.69       112.37        84.59       140.48 
TCGA-B6-A0RV TCGA-B6-A0WY TCGA-B6-A0X7 TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 
      157.41       113.75        58.88        25.55        28.50        46.92 
TCGA-BH-A0B6 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BD TCGA-BH-A0BF TCGA-BH-A0BJ 
       56.94        37.22        32.02        18.21        25.68        21.70 
TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG 
       36.72        35.67        48.69        48.13        31.17        23.44 
TCGA-BH-A0DI TCGA-BH-A0DO TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DV TCGA-BH-A0DX 
       22.13        17.26        15.65         3.22        45.17        47.41 
TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A0H9 TCGA-BH-A0HP 
       46.19        32.65        37.78        35.51        41.00        13.61 
TCGA-BH-A0W4 TCGA-BH-A18F TCGA-BH-A18M TCGA-BH-A18R TCGA-BH-A1EU TCGA-BH-A1FB 
        5.75         8.81        72.56        37.51        42.28       120.62 
TCGA-BH-A1FE TCGA-BH-A1FH TCGA-BH-A201 TCGA-BH-A209 TCGA-BH-A28O TCGA-C8-A1HI 
       74.73        36.92         6.87       130.16        10.62         0.07 
TCGA-C8-A26W TCGA-C8-A3M7 TCGA-D8-A141 TCGA-D8-A145 TCGA-D8-A146 TCGA-D8-A1JH 
        0.23         0.03         3.72         1.61        11.31         9.34 
TCGA-D8-A1JU TCGA-D8-A1XM TCGA-D8-A1Y0 TCGA-D8-A27I TCGA-D8-A27T TCGA-D8-A27V 
        3.48         7.17         5.46         6.08         4.44         2.40 
TCGA-E2-A108 TCGA-E2-A10F TCGA-E2-A14Q TCGA-E2-A14U TCGA-E2-A14Z TCGA-E2-A15E 
        4.08        11.84        32.02        27.55        17.03        17.00 
TCGA-E2-A15I TCGA-E2-A15M TCGA-E2-A15P TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1BC 
       13.51         7.69        10.36        44.75        25.45         9.76 
TCGA-E2-A1IF TCGA-E2-A1IJ TCGA-E2-A1IL TCGA-E2-A1IO TCGA-E2-A1L6 TCGA-E2-A3DX 
       31.43        23.84         0.46        14.73        43.13         7.13 
TCGA-E9-A2JT TCGA-E9-A3X8 TCGA-EW-A1IW TCGA-EW-A1IX TCGA-EW-A1J2 TCGA-EW-A1J5 
        0.76         0.76         8.28        35.57         4.57         7.46 
TCGA-EW-A1OV TCGA-EW-A1PD TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A2FS TCGA-EW-A2FV 
       17.16         5.72         4.57        28.77        38.56         7.82 
TCGA-EW-A3E8 TCGA-GM-A2DA TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DO 
       21.27       194.27        61.91        62.33        90.81        53.33 
TCGA-GM-A3NY TCGA-GM-A3XG TCGA-GM-A3XN TCGA-LL-A440 
       24.43        32.25        53.92         0.66 

$subtype3
TCGA-A1-A0SG TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04N TCGA-A2-A04R 
       14.24         7.96        39.32        18.18       103.66        77.72 
TCGA-A2-A04V TCGA-A2-A04X TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU 
       63.12        44.35        78.64        75.55        63.02         5.16 
TCGA-A2-A0CV TCGA-A2-A0CW TCGA-A2-A0CY TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM 
       61.48        57.53        42.35        24.20        16.31        90.64 
TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0T5 
       62.53        26.53        24.10        27.12        44.84        10.55 
TCGA-A2-A0YC TCGA-A2-A0YF TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YI TCGA-A2-A0YT 
       21.14         9.50        13.28        12.46        11.77        23.77 
TCGA-A2-A1FV TCGA-A2-A1FX TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25E 
       15.12        30.74        12.23         8.48         9.37        82.55 
TCGA-A7-A0CD TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A13F TCGA-A7-A13G TCGA-A7-A26E 
        5.59         5.29         6.18         6.44         6.84        13.84 
TCGA-A7-A26H TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3IY TCGA-A7-A3IZ TCGA-A7-A3J0 
        2.10         2.20         5.95         4.96         4.87         2.50 
TCGA-A7-A3RF TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06R TCGA-A8-A06T 
        1.78        13.02        13.02         1.02        17.95        41.06 
TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A075 TCGA-A8-A076 
       29.00        31.00        26.01         1.02        17.00        53.95 
TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07F TCGA-A8-A07G TCGA-A8-A07I TCGA-A8-A07L 
        9.01        33.01        18.94        18.94        14.01        17.00 
TCGA-A8-A07P TCGA-A8-A07S TCGA-A8-A07W TCGA-A8-A082 TCGA-A8-A084 TCGA-A8-A085 
       10.98         7.96         9.99        18.05        15.06        36.95 
TCGA-A8-A086 TCGA-A8-A08B TCGA-A8-A08C TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08I 
       13.02        23.08        19.96        18.05        19.92        12.00 
TCGA-A8-A08J TCGA-A8-A08P TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A091 
       37.05        30.97        19.07        93.04        40.01        19.07 
TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A097 TCGA-A8-A099 TCGA-A8-A09B 
       16.01        17.92        41.95        12.00         9.99        12.00 
TCGA-A8-A09C TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N TCGA-A8-A09Q 
        1.02        33.07        29.95        15.02         1.02        25.02 
TCGA-A8-A09R TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A0A2 TCGA-A8-A0A9 TCGA-A8-A0AB 
        8.98        19.00        15.02        19.00        13.02        17.00 
TCGA-A8-A0AD TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A2BM TCGA-AC-A2FM TCGA-AC-A2QI 
       38.04         0.95         2.37        38.20        26.04         0.92 
TCGA-AC-A3TN TCGA-AC-A3YJ TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A049 
        1.12         1.28         0.33         0.33         0.23         0.62 
TCGA-AN-A04A TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0FD 
        2.93         7.99         7.33         0.16         0.30         6.41 
TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0FT TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XN 
        4.60         6.97         6.02         0.33         0.33         0.33 
TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AN-A0XV 
       12.33         0.30         0.33         0.33         0.33         5.33 
TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A0J3 
        5.59        80.28        54.08        81.63        84.69         9.93 
TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0JA TCGA-AO-A0JD TCGA-AO-A0JF TCGA-AO-A0JI 
        8.55         9.11        11.38        59.61        11.64        38.53 
TCGA-AO-A0JM TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12G 
       60.03        99.22        93.70        77.56        65.52        41.59 
TCGA-AO-A12H TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H 
       28.34        82.62        49.94         0.53        17.79        14.43 
TCGA-AQ-A1H2 TCGA-AQ-A1H3 TCGA-AR-A0TR TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY 
        7.56         5.33         5.26        29.72        24.30        55.86 
TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A1AP TCGA-AR-A1AS TCGA-AR-A1AV 
       43.17        83.87        74.40        39.95        40.83        42.58 
TCGA-AR-A24H TCGA-AR-A24K TCGA-AR-A24L TCGA-AR-A24M TCGA-AR-A24N TCGA-AR-A24P 
      109.58        50.89        73.02        65.42        68.19         0.85 
TCGA-AR-A24R TCGA-AR-A24V TCGA-AR-A24X TCGA-AR-A24Z TCGA-AR-A250 TCGA-AR-A2LE 
       57.37        54.18        48.16        51.75        56.12       128.65 
TCGA-AR-A2LK TCGA-AR-A2LL TCGA-B6-A0I5 TCGA-B6-A0I8 TCGA-B6-A0I9 TCGA-B6-A0IA 
       42.84         7.33       149.56        24.62        12.13       220.87 
TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IG TCGA-B6-A0IM TCGA-B6-A0IO TCGA-B6-A0IP 
      129.57        50.70       146.50       126.12       110.14       110.93 
TCGA-B6-A0RG TCGA-B6-A0RH TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN 
       68.45       188.98       223.40        81.17        78.02       172.96 
TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0WS TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW 
      162.02       102.77        97.48       177.40        79.63        17.95 
TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A1KC TCGA-B6-A1KI 
      129.57       129.70        28.24        68.94        43.59        48.10 
TCGA-B6-A1KN TCGA-B6-A2IU TCGA-BH-A0AU TCGA-BH-A0B1 TCGA-BH-A0B4 TCGA-BH-A0B5 
      109.48       159.12        24.53        37.74        39.16        48.36 
TCGA-BH-A0B8 TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0BZ 
       51.58        27.16        53.92        45.57        49.94        49.05 
TCGA-BH-A0C0 TCGA-BH-A0C1 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK 
       41.75        43.99        42.90        45.80        38.01        13.91 
TCGA-BH-A0DS TCGA-BH-A0DT TCGA-BH-A0E1 TCGA-BH-A0E2 TCGA-BH-A0E7 TCGA-BH-A0EB 
        2.53        38.47        15.68        12.36        44.78        24.49 
TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H6 TCGA-BH-A0H7 
       24.43        30.15        10.78        15.16        24.56        23.05 
TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HK TCGA-BH-A0HL 
       28.14        26.50        23.90        20.35         5.85         2.37 
TCGA-BH-A0HN TCGA-BH-A0HO TCGA-BH-A0HQ TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX 
       16.96         2.50        36.85        12.89        51.29        27.25 
TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A0W5 TCGA-BH-A0W7 TCGA-BH-A18I TCGA-BH-A18J 
       28.50         5.92        17.85        18.35         7.23        20.09 
TCGA-BH-A18K TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-BH-A18U 
       90.81        26.66        37.74        30.28        66.05        51.39 
TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EV TCGA-BH-A1EW TCGA-BH-A1EY 
       91.99       113.82        82.85        12.00        55.69        17.69 
TCGA-BH-A1F5 TCGA-BH-A1F8 TCGA-BH-A1FD TCGA-BH-A1FG TCGA-BH-A1FJ TCGA-BH-A1FL 
       89.16        24.62        33.14       122.89        63.35        55.00 
TCGA-BH-A1FM TCGA-BH-A1FN TCGA-BH-A1FR TCGA-BH-A202 TCGA-BH-A204 TCGA-BH-A28Q 
       45.63        72.07       144.59         0.72        83.31         6.44 
TCGA-C8-A138 TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A1HN TCGA-C8-A26V TCGA-C8-A26Z 
        0.23         0.07         0.20         0.07         0.30         0.13 
TCGA-C8-A273 TCGA-C8-A274 TCGA-C8-A27A TCGA-C8-A3M8 TCGA-D8-A140 TCGA-D8-A1J8 
        0.20         0.03        12.20         0.23         0.89         8.42 
TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JN 
        5.85         8.98         1.87         0.69         9.01         7.13 
TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1X5 TCGA-D8-A1X6 TCGA-D8-A1X7 
        5.49         3.45         4.04         5.62         7.76         2.79 
TCGA-D8-A1X8 TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XD 
        8.94        12.49         9.01         6.61         2.66         5.10 
TCGA-D8-A1XF TCGA-D8-A1XG TCGA-D8-A1XJ TCGA-D8-A1XL TCGA-D8-A1XO TCGA-D8-A1XR 
        6.48         6.44        11.57        10.49         7.96         5.52 
TCGA-D8-A1XS TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XY TCGA-D8-A1XZ TCGA-D8-A1Y1 
        1.64         4.90         4.80         2.66         3.95         3.78 
TCGA-D8-A1Y2 TCGA-D8-A1Y3 TCGA-D8-A27E TCGA-D8-A27G TCGA-D8-A27K TCGA-D8-A27L 
        2.37         4.08         5.98         6.87         3.88         4.11 
TCGA-D8-A27N TCGA-D8-A27P TCGA-D8-A27R TCGA-D8-A27W TCGA-E2-A105 TCGA-E2-A106 
        4.77         0.76         2.96         0.49        38.24        51.12 
TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10C TCGA-E2-A10E 
       25.08        38.53        11.57        24.59        28.04        13.74 
TCGA-E2-A14O TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A153 
       38.53        27.42        29.26        24.59        27.39        19.27 
TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15C TCGA-E2-A15D 
       10.68        18.18        15.81        16.50        16.31        10.36 
TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L 
       15.39        10.36         1.38        15.22         1.12        10.88 
TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1BD 
       12.99        10.85         9.01         8.78        29.95        10.42 
TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IH TCGA-E2-A1IK TCGA-E2-A1IN TCGA-E2-A1IU 
       32.32        24.82        21.63        17.03        12.89         4.18 
TCGA-E2-A1L7 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E2-A2P5 TCGA-E2-A2P6 
       20.81        33.37        12.76        15.22        10.72         5.49 
TCGA-E9-A1R2 TCGA-E9-A1R3 TCGA-E9-A1R4 TCGA-E9-A1R5 TCGA-E9-A1R6 TCGA-E9-A1R7 
        0.62         2.10         0.95         1.38         2.76         1.12 
TCGA-E9-A1RB TCGA-E9-A1RC TCGA-E9-A1RD TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RI 
        0.69        40.37         0.66         1.55         1.25         1.58 
TCGA-E9-A226 TCGA-E9-A227 TCGA-E9-A245 TCGA-E9-A247 TCGA-E9-A249 TCGA-E9-A24A 
        0.53         0.79         0.82         0.39         0.92         0.33 
TCGA-E9-A295 TCGA-E9-A2JS TCGA-E9-A3HO TCGA-EW-A1IY TCGA-EW-A1J1 TCGA-EW-A1J3 
        0.69         0.43         0.62         8.48         9.27         8.28 
TCGA-EW-A1J6 TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ TCGA-EW-A1P0 TCGA-EW-A1P3 
       19.56        18.48        19.50        30.94        36.85        32.45 
TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PA TCGA-EW-A1PC TCGA-EW-A1PE TCGA-EW-A2FW 
       12.00        10.26         8.78         6.12         3.48         6.25 
TCGA-GI-A2C8 TCGA-GM-A2D9 TCGA-GM-A2DC TCGA-GM-A2DM TCGA-GM-A2DN TCGA-GM-A3NW 
        6.97        59.57        53.52        76.64        77.33        98.04 

subtype1 subtype2 subtype3 
    0.03     0.03     0.03 
subtype1 subtype2 subtype3 
  211.53   194.27   223.40 
subtype1 subtype2 subtype3 
  19.330   24.755   16.730 
[1] "0.0 - 211.5 (19.3)" "0.0 - 194.3 (24.8)" "0.0 - 223.4 (16.7)"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [13] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
 [19] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
 [25] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [31] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
 [37] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
 [55] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
 [61] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
 [67] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
 [73] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
 [79] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
 [85] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
 [91] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[103] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[115] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[121] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[139] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[145] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[151] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[169] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[175] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[187] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[193] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[199] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[205] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[217] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[223] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[229] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[235] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[241] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[247] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[253] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[259] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[265] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[277] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[289] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[295] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[301] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[307] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[313] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[325] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[337] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[343] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[349] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[355] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[361] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[367] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[373] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[379] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[385] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[391] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[397] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[403] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[409] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[415] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[421] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[427] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[433] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[439] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[445] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[451] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[457] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[463] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[469] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[475] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[481] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[487] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[493] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[499] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[505] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[511] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[517] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[523] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[529] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[535] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[541] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[547] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[553] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[559] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[565] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[571] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[577] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[583] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[589] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[595] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[601] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[607] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[613] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[619] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[625] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[631] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[637] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[643] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[649] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[655] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[661] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[667] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[673] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[679] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[685] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[691] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[697] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[703] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[709] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[715] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[721] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[727] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[733] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[739] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[745] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[751] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[757] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[763] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[769] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[775] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[781] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[787] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[793] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[799] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[805] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[811] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[817] "subtype2" "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [13] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
 [19] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
 [25] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [31] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
 [37] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
 [55] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
 [61] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
 [67] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
 [73] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
 [79] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
 [85] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
 [91] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[103] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[115] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[121] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[139] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[145] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[151] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[169] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[175] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[187] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[193] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[199] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[205] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[217] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[223] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[229] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[235] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[241] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[247] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[253] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[259] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[265] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[277] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[289] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[295] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[301] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[307] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[313] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[325] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[337] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[343] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[349] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[355] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[361] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[367] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[373] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[379] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[385] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[391] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[397] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[403] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[409] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[415] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[421] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[427] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[433] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[439] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[445] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[451] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[457] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[463] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[469] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[475] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[481] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[487] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[493] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[499] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[505] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[511] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[517] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[523] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[529] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[535] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[541] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[547] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[553] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[559] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[565] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[571] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[577] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[583] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[589] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[595] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[601] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[607] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[613] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[619] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[625] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[631] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[637] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[643] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[649] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[655] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[661] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[667] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[673] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[679] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[685] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[691] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[697] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[703] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[709] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[715] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[721] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[727] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[733] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[739] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[745] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[751] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[757] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[763] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[769] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[775] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[781] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[787] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[793] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[799] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[805] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[811] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[817] "subtype2" "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [13] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
 [19] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
 [25] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [31] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
 [37] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
 [55] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
 [61] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
 [67] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
 [73] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
 [79] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
 [85] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
 [91] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[103] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[115] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[121] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[139] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[145] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[151] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[169] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[175] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[187] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[193] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[199] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[205] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[217] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[223] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[229] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[235] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[241] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[247] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[253] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[259] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[265] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[277] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[289] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[295] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[301] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[307] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[313] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[325] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[337] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[343] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[349] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[355] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[361] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[367] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[373] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[379] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[385] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[391] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[397] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[403] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[409] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[415] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[421] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[427] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[433] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[439] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[445] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[451] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[457] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[463] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[469] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[475] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[481] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[487] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[493] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[499] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[505] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[511] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[517] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[523] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[529] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[535] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[541] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[547] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[553] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[559] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[565] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[571] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[577] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[583] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[589] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[595] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[601] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[607] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[613] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[619] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[625] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[631] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[637] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[643] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[649] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[655] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[661] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[667] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[673] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[679] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[685] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[691] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[697] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[703] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[709] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[715] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[721] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[727] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[733] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[739] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[745] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[751] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[757] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[763] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[769] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[775] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[781] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[787] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[793] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[799] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[805] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[811] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[817] "subtype2" "subtype2" "subtype1"
D8V2, continuous
D8V3, binary
          cls
clus         0   1
  subtype1 218   0
  subtype2 201   1
  subtype3 449   8
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  218    0
  subtype2  201    1
  subtype3  449    8
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      218      201      449
  MALE          0        1        8
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                           196                              5
  subtype2                           114                             73
  subtype3                           372                             38
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   3                                1
  subtype2                   1                                8
  subtype3                   0                               16
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  0             13
  subtype2                  1              5
  subtype3                  9             22
D8V4, multiclass
D8V5, binary
          cls
clus         0   1
  subtype1  59 159
  subtype2  50 152
  subtype3 104 353
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   59  159
  subtype2   50  152
  subtype3  104  353
     clus
vv    subtype1 subtype2 subtype3
  NO        59       50      104
  YES      159      152      353
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 202   3  13
  subtype2        1 171   3  27
  subtype3        1 405   9  42
D8V6, multiclass
          vv
clus        N0 N0 (I+) N0 (I-) N0 (MOL+)  N1 N1A N1B N1C N1MI  N2 N2A  N3 N3A
  subtype1  73       5      41         0  27  21   9   1    2  10  11   5   8
  subtype2  55       9      34         0  22  28   6   0   11   6  13   5  10
  subtype3 128       8      60         1  55  81  17   1   11  34  30   9  13
          vv
clus       N3B N3C  NX
  subtype1   1   1   3
  subtype2   0   0   3
  subtype3   0   0   9
D8V7, multiclass
D8V8, continuous
D8V9, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      14       17        0        1        93        45         1
  subtype2      26       16        3        5        52        47         0
  subtype3      32       36        4        2       151       106         1
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         22          5         12        3         0       4
  subtype2         30          1         13        3         1       5
  subtype3         73         19         16        9         0       8
D8V10, multiclass

Clustering(9) Variable = MIRSEQ_CNMF
D9V1, survival
          sevent
clus2        0   1
  subtype1 187  23
  subtype2 334  37
  subtype3 193  35
subtype1 subtype2 subtype3 
     210      371      228 
subtype1 subtype2 subtype3 
      23       37       35 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SD TCGA-A1-A0SF TCGA-A2-A0CK TCGA-A2-A0CO TCGA-A2-A0CP 
        8.52        14.37        48.10       125.56       112.04        82.03 
TCGA-A2-A0CU TCGA-A2-A0CV TCGA-A2-A0CZ TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0ES 
        5.16        61.48        43.99        82.68        71.70        32.91 
TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0SU TCGA-A2-A0T1 TCGA-A2-A0T4 
       17.92        25.32        18.05        44.42        10.59        12.99 
TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1FX TCGA-A2-A1FZ 
       11.31        13.05        10.98         8.81        30.74        13.45 
TCGA-A2-A1G0 TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25D TCGA-A2-A3KC 
       12.49         4.34        42.25        97.58         7.99        11.93 
TCGA-A2-A3KD TCGA-A2-A3XZ TCGA-A7-A0CG TCGA-A7-A13H TCGA-A7-A26G TCGA-A7-A26H 
       26.40        31.96         5.46        18.12         6.87         2.10 
TCGA-A7-A3IY TCGA-A7-A3IZ TCGA-A7-A3J1 TCGA-A8-A097 TCGA-A8-A0A6 TCGA-AC-A23G 
        4.96         4.87         2.47        12.00        21.04        10.82 
TCGA-AC-A2B8 TCGA-AC-A2BM TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK 
        1.45        38.20         1.45        55.40        36.99        38.79 
TCGA-AC-A2FM TCGA-AC-A2FO TCGA-AC-A2QI TCGA-AC-A2QJ TCGA-AC-A3BB TCGA-AC-A3HN 
       26.04        50.70         0.92         2.27         0.99         0.69 
TCGA-AC-A3OD TCGA-AC-A3QP TCGA-AC-A3W6 TCGA-AC-A3YI TCGA-AN-A0XT TCGA-AN-A0XV 
        1.15         9.40         1.68         1.51         0.33         5.33 
TCGA-AO-A03V TCGA-AO-A0J9 TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A12A TCGA-AO-A12E 
       29.13        41.26        11.64        14.76        90.54        57.27 
TCGA-AO-A1KO TCGA-AQ-A1H3 TCGA-AR-A0TR TCGA-AR-A0TY TCGA-AR-A0U1 TCGA-AR-A1AJ 
       14.73         5.33         5.26        55.86         6.08        52.73 
TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AO TCGA-AR-A1AU TCGA-AR-A1AX TCGA-AR-A24O 
       51.22        48.82        43.53        46.32        36.26        65.65 
TCGA-AR-A24P TCGA-AR-A24S TCGA-AR-A24T TCGA-AR-A24U TCGA-AR-A24W TCGA-AR-A252 
        0.85        62.07        53.26        53.36        50.96        40.64 
TCGA-AR-A2LE TCGA-AR-A2LH TCGA-AR-A2LL TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
      128.65        20.22         7.33        40.01        17.06        20.81 
TCGA-AR-A2LQ TCGA-AR-A2LR TCGA-B6-A0IH TCGA-B6-A0IK TCGA-B6-A0RQ TCGA-B6-A0RU 
       16.96        20.38       112.37        18.77       140.48       131.21 
TCGA-B6-A0WS TCGA-B6-A0WX TCGA-B6-A2IU TCGA-BH-A0AZ TCGA-BH-A0B5 TCGA-BH-A0B6 
       97.48        21.47       159.12        28.50        48.36        56.94 
TCGA-BH-A0B7 TCGA-BH-A0BA TCGA-BH-A0BD TCGA-BH-A0BF TCGA-BH-A0BL TCGA-BH-A0BO 
       56.98        37.22        18.21        25.68        44.02        35.67 
TCGA-BH-A0BQ TCGA-BH-A0BZ TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DI TCGA-BH-A0DO 
       27.16        49.05        48.13        31.17        22.13        17.26 
TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0H3 
       38.47        45.17        47.41        46.19        32.65        37.78 
TCGA-BH-A0H5 TCGA-BH-A0HP TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A18F TCGA-BH-A18M 
       35.51        13.61         5.75        17.85         8.81        72.56 
TCGA-BH-A1EO TCGA-BH-A1EU TCGA-BH-A1EW TCGA-BH-A1EX TCGA-BH-A1F0 TCGA-BH-A1FB 
       91.99        42.28        55.69        49.58        25.81       120.62 
TCGA-BH-A1FE TCGA-BH-A1FH TCGA-BH-A1FU TCGA-BH-A201 TCGA-BH-A208 TCGA-BH-A28O 
       74.73        36.92        72.07         6.87        57.83        10.62 
TCGA-BH-A28Q TCGA-C8-A137 TCGA-C8-A26W TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A3M7 
        6.44         0.85         0.23         0.36         0.43         0.03 
TCGA-D8-A145 TCGA-D8-A146 TCGA-D8-A1JH TCGA-D8-A1JU TCGA-D8-A1X8 TCGA-D8-A1XB 
        1.61        11.31         9.34         3.48         8.94         6.61 
TCGA-D8-A1XM TCGA-D8-A1Y2 TCGA-D8-A27G TCGA-D8-A27H TCGA-D8-A27I TCGA-D8-A27K 
        7.17         2.37         6.87         4.60         6.08         3.88 
TCGA-D8-A27L TCGA-D8-A27M TCGA-D8-A27N TCGA-D8-A27P TCGA-D8-A27R TCGA-D8-A27T 
        4.11         4.73         4.77         0.76         2.96         4.44 
TCGA-D8-A27W TCGA-E2-A108 TCGA-E2-A10F TCGA-E2-A14N TCGA-E2-A14Q TCGA-E2-A14U 
        0.49         4.08        11.84        44.38        32.02        27.55 
TCGA-E2-A14Z TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15F TCGA-E2-A15M TCGA-E2-A1B1 
       17.03        10.36        17.00        15.39         7.69        44.75 
TCGA-E2-A1BC TCGA-E2-A1BD TCGA-E2-A1IF TCGA-E2-A1IH TCGA-E2-A1IJ TCGA-E2-A1IK 
        9.76        10.42        31.43        21.63        23.84        17.03 
TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1LE TCGA-E2-A2P5 TCGA-E2-A3DX TCGA-E9-A1R3 
        4.18        43.13        28.90        10.72         7.13         2.10 
TCGA-E9-A227 TCGA-E9-A295 TCGA-E9-A2JT TCGA-E9-A3X8 TCGA-EW-A1IW TCGA-EW-A1J2 
        0.79         0.69         0.76         0.76         8.28         4.57 
TCGA-EW-A1P1 TCGA-EW-A1P7 TCGA-EW-A1PA TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A2FS 
       30.21        20.88         8.78         4.57        28.77        38.56 
TCGA-EW-A2FV TCGA-GI-A2C8 TCGA-GM-A2DA TCGA-GM-A2DC TCGA-GM-A2DD TCGA-GM-A2DF 
        7.82         6.97       194.27        53.52        43.04        42.71 
TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DN TCGA-GM-A3NW TCGA-GM-A3XN 
       61.91        62.33        90.81        77.33        98.04        53.92 

$subtype2
TCGA-A1-A0SE TCGA-A1-A0SG TCGA-A1-A0SH TCGA-A1-A0SI TCGA-A1-A0SJ TCGA-A1-A0SM 
       43.40        14.24        47.24        20.84        14.01         7.96 
TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04N TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A04W 
       39.32        18.18       103.66        77.72        63.12        63.06 
TCGA-A2-A04Y TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0D3 TCGA-A2-A0D4 
       25.08        78.64        75.55        63.02        24.20        16.31 
TCGA-A2-A0EM TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0EY TCGA-A2-A0SV 
       90.64        62.53        26.53        24.10        15.95        27.12 
TCGA-A2-A0SY TCGA-A2-A0T3 TCGA-A2-A0T5 TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YF 
       37.94        14.99        10.55        21.14        18.08         9.50 
TCGA-A2-A0YH TCGA-A2-A0YI TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW TCGA-A2-A1G4 
       12.46        11.77        23.77        15.12         7.27        12.23 
TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25E TCGA-A7-A0CD TCGA-A7-A0CH TCGA-A7-A0CJ 
        8.48         9.37        82.55         5.59         5.29         6.18 
TCGA-A7-A0D9 TCGA-A7-A0DB TCGA-A7-A13F TCGA-A7-A13G TCGA-A7-A26E TCGA-A7-A26J 
        5.23         4.60         6.44         6.84        13.84         2.20 
TCGA-A7-A3J0 TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06Y 
        2.50        13.02         1.02        41.06        29.00        26.01 
TCGA-A8-A06Z TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A07B TCGA-A8-A07E TCGA-A8-A07F 
        1.02        17.00        53.95        33.01        19.99        18.94 
TCGA-A8-A07G TCGA-A8-A07I TCGA-A8-A07J TCGA-A8-A07P TCGA-A8-A07S TCGA-A8-A07Z 
       18.94        14.01        12.00        10.98         7.96        28.04 
TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G TCGA-A8-A08I 
       15.06        36.95        13.02         0.99        19.92        12.00 
TCGA-A8-A08J TCGA-A8-A08O TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A091 
       37.05        30.97        19.07        93.04        40.01        19.07 
TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A099 TCGA-A8-A09A TCGA-A8-A09B 
       16.01        17.92        41.95         9.99         9.99        12.00 
TCGA-A8-A09C TCGA-A8-A09D TCGA-A8-A09E TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N 
        1.02        13.02        30.97        29.95        15.02         1.02 
TCGA-A8-A09R TCGA-A8-A09T TCGA-A8-A09X TCGA-A8-A0A1 TCGA-A8-A0A2 TCGA-A8-A0A4 
        8.98        19.00        14.01        12.00        19.00        13.02 
TCGA-A8-A0A9 TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A23H 
       13.02        17.00        38.04         0.95         2.37         2.66 
TCGA-AC-A3TN TCGA-AC-A3YJ TCGA-AN-A03X TCGA-AN-A041 TCGA-AN-A046 TCGA-AN-A049 
        1.12         1.28         0.33         0.23         0.33         0.62 
TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0FN TCGA-AN-A0FS 
        0.30         6.41         4.60         6.97         7.17         6.28 
TCGA-AN-A0XL TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS 
        0.33         0.33        12.33         0.30         0.33         0.33 
TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A0J5 TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0JA 
       54.08        81.63        24.16         8.55         9.11        11.38 
TCGA-AO-A0JB TCGA-AO-A0JI TCGA-AO-A0JJ TCGA-AO-A0JM TCGA-AO-A125 TCGA-AO-A126 
       37.81        38.53        49.71        60.03        99.22        93.70 
TCGA-AO-A128 TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12G TCGA-AO-A12H TCGA-AO-A1KP 
       94.59        77.56        65.52        41.59        28.34        82.62 
TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A04L TCGA-AQ-A1H2 TCGA-AR-A0TQ 
        0.53        17.79        14.43       110.43         7.56        49.32 
TCGA-AR-A0TV TCGA-AR-A0TX TCGA-AR-A0TZ TCGA-AR-A0U3 TCGA-AR-A1AN TCGA-AR-A1AP 
       29.72         0.49        43.17        74.40        43.69        39.95 
TCGA-AR-A1AS TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A24H TCGA-AR-A24L 
       40.83        41.82        42.58        35.24       109.58        73.02 
TCGA-AR-A24M TCGA-AR-A24N TCGA-AR-A24R TCGA-AR-A24V TCGA-AR-A24X TCGA-AR-A24Z 
       65.42        68.19        57.37        54.18        48.16        51.75 
TCGA-AR-A250 TCGA-AR-A255 TCGA-AR-A2LK TCGA-B6-A0I5 TCGA-B6-A0I8 TCGA-B6-A0IA 
       56.12        34.78        42.84       149.56        24.62       220.87 
TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0IP 
      129.57        50.70       126.12        84.59       110.14       110.93 
TCGA-B6-A0RG TCGA-B6-A0RH TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN 
       68.45       188.98       223.40        81.17        78.02       172.96 
TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0RV TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW 
      162.02       102.77       157.41       177.40        79.63        17.95 
TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A1KI TCGA-B6-A1KN 
      129.57       129.70        28.24        68.94        48.10       109.48 
TCGA-BH-A0AU TCGA-BH-A0AY TCGA-BH-A0B0 TCGA-BH-A0B1 TCGA-BH-A0B4 TCGA-BH-A0B8 
       24.53        25.55        46.92        37.74        39.16        51.58 
TCGA-BH-A0BC TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BP TCGA-BH-A0BR TCGA-BH-A0BS 
       32.02        21.70        36.72        48.69        53.65        53.92 
TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0C1 TCGA-BH-A0C7 TCGA-BH-A0DG TCGA-BH-A0DH 
       45.57        49.94        43.99        42.90        23.44        38.01 
TCGA-BH-A0DK TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0E1 TCGA-BH-A0E2 
       13.91        15.65         3.22         2.53        15.68        12.36 
TCGA-BH-A0E7 TCGA-BH-A0EI TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H6 TCGA-BH-A0H7 
       44.78        24.43        10.78        15.16        24.56        23.05 
TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HK 
       41.00        28.14        26.50        23.90        20.35         5.85 
TCGA-BH-A0HL TCGA-BH-A0HN TCGA-BH-A0HO TCGA-BH-A0HQ TCGA-BH-A0HU TCGA-BH-A0HW 
        2.37        16.96         2.50        36.85        12.89        51.29 
TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A0W7 TCGA-BH-A18I TCGA-BH-A18J 
       27.25        28.50         5.92        18.35         7.23        20.09 
TCGA-BH-A18K TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-BH-A1EN TCGA-BH-A1ES 
       90.81        37.74        30.28        66.05        67.46       113.82 
TCGA-BH-A1ET TCGA-BH-A1EV TCGA-BH-A1EY TCGA-BH-A1F5 TCGA-BH-A1F8 TCGA-BH-A1FG 
       82.85        12.00        17.69        89.16        24.62       122.89 
TCGA-BH-A1FL TCGA-BH-A1FR TCGA-BH-A202 TCGA-BH-A204 TCGA-C8-A138 TCGA-C8-A1HI 
       55.00       144.59         0.72        83.31         0.23         0.07 
TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HN TCGA-C8-A26V TCGA-C8-A26Z TCGA-C8-A273 
        0.23         0.07         0.07         0.30         0.13         0.20 
TCGA-C8-A274 TCGA-C8-A3M8 TCGA-D8-A13Y TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A1J8 
        0.03         0.23         8.68         0.89         3.72         8.42 
TCGA-D8-A1J9 TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JN 
        8.15         8.98         1.87         0.69         9.01         7.13 
TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1X9 
        5.49         3.45         4.04         7.76         2.79        12.49 
TCGA-D8-A1XA TCGA-D8-A1XC TCGA-D8-A1XD TCGA-D8-A1XG TCGA-D8-A1XO TCGA-D8-A1XR 
        9.01         2.66         5.10         6.44         7.96         5.52 
TCGA-D8-A1XS TCGA-D8-A1XU TCGA-D8-A1XY TCGA-D8-A1Y0 TCGA-D8-A1Y1 TCGA-D8-A27E 
        1.64         4.90         2.66         5.46         3.78         5.98 
TCGA-D8-A27V TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A 
        2.40        38.24        51.12        25.08        38.53        11.57 
TCGA-E2-A10B TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A14O TCGA-E2-A14S TCGA-E2-A14T 
       24.59        28.04        13.74        38.53        27.42        29.26 
TCGA-E2-A152 TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15C 
       19.33        19.27        10.68        18.18        15.81        16.31 
TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L 
       10.36         1.38        13.51        15.22         1.12        10.88 
TCGA-E2-A15O TCGA-E2-A15P TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 
       12.99        10.36        10.85         9.01         8.78        29.95 
TCGA-E2-A1B5 TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO 
       25.45        32.32        24.82         0.46        12.89        14.73 
TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E2-A1LB TCGA-E2-A2P6 TCGA-E9-A1R2 
       33.37        12.76        15.22        31.96         5.49         0.62 
TCGA-E9-A1R4 TCGA-E9-A1R5 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RA TCGA-E9-A1RC 
        0.95         1.38         2.76         1.12         0.95        40.37 
TCGA-E9-A1RD TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A1RI TCGA-E9-A226 
        0.66         1.55         1.25         1.15         1.58         0.53 
TCGA-E9-A245 TCGA-E9-A247 TCGA-E9-A249 TCGA-E9-A24A TCGA-EW-A1IX TCGA-EW-A1IY 
        0.82         0.39         0.92         0.33        35.57         8.48 
TCGA-EW-A1J1 TCGA-EW-A1J3 TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OX TCGA-EW-A1OY 
        9.27         8.28         7.46        19.56        18.48        19.50 
TCGA-EW-A1OZ TCGA-EW-A1P0 TCGA-EW-A1P3 TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PD 
       30.94        36.85        32.45        12.00        10.26         5.72 
TCGA-EW-A1PE TCGA-EW-A2FW TCGA-GM-A2D9 TCGA-GM-A2DM TCGA-GM-A3NY 
        3.48         6.25        59.57        76.64        24.43 

$subtype3
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T 
       31.79        28.01        19.17        17.98        41.92        64.11 
TCGA-A2-A04U TCGA-A2-A04X TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CW TCGA-A2-A0CY 
       22.03        44.35        60.07        24.79        57.53        42.35 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0ST TCGA-A2-A0SW 
       21.14        25.84        25.02        67.50        54.02        44.84 
TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YG TCGA-A2-A0YM TCGA-A2-A1G1 
       42.35        11.08         7.96        13.28        21.73        12.20 
TCGA-A2-A25F TCGA-A2-A3XV TCGA-A2-A3XX TCGA-A2-A3Y0 TCGA-A7-A0CE TCGA-A7-A0DA 
        3.72        14.07        38.40        28.21         8.32        12.26 
TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26I TCGA-A7-A2KD TCGA-A7-A3RF 
        8.78         9.44         8.45         4.01         5.95         1.78 
TCGA-A8-A06O TCGA-A8-A06R TCGA-A8-A079 TCGA-A8-A07C TCGA-A8-A07L TCGA-A8-A07O 
       13.02        17.95         9.01        19.07        17.00         9.99 
TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A07W TCGA-A8-A082 TCGA-A8-A08B TCGA-A8-A08L 
        8.98         9.96         9.99        18.05        23.08         9.99 
TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A09I TCGA-A8-A09Q TCGA-A8-A0A7 TCGA-AC-A2BK 
        0.99        33.99        33.07        25.02         0.99        38.53 
TCGA-AC-A2QH TCGA-AN-A03Y TCGA-AN-A04A TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AJ 
        1.02         0.33         2.93         1.78         1.71         7.99 
TCGA-AN-A0AK TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AT TCGA-AN-A0FJ 
        7.33         6.48         0.16         0.30         0.33         7.92 
TCGA-AN-A0FL TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0FX TCGA-AN-A0FY 
        7.56         6.02         0.33         0.36         0.33         0.33 
TCGA-AN-A0FZ TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03M 
        0.33         0.53         0.33         5.59        80.28        47.84 
TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J3 TCGA-AO-A0J4 
       56.12        39.02        59.05        19.23         9.93         9.67 
TCGA-AO-A0J6 TCGA-AO-A0JC TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 
       25.48        50.86        59.61        64.60        43.36       102.54 
TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F TCGA-AO-A1KQ TCGA-AO-A1KR TCGA-AQ-A04J 
       96.10        64.04        48.36        49.94        70.36         5.23 
TCGA-AQ-A0Y5 TCGA-AR-A0TP TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0U2 TCGA-AR-A0U4 
        5.62        78.64        37.41        55.20        83.87        53.49 
TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-AR-A24K 
       75.55        61.84        43.04        17.19        20.19        50.89 
TCGA-AR-A24Q TCGA-AR-A251 TCGA-AR-A254 TCGA-AR-A256 TCGA-B6-A0I1 TCGA-B6-A0I2 
       66.02        45.14        39.85        93.83        77.62       125.79 
TCGA-B6-A0I6 TCGA-B6-A0I9 TCGA-B6-A0IE TCGA-B6-A0IG TCGA-B6-A0IJ TCGA-B6-A0IQ 
       32.58        12.13        65.69       146.50       176.98       127.27 
TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0WY TCGA-B6-A0X7 TCGA-B6-A1KC 
      211.53       100.67        89.46       113.75        58.88        43.59 
TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0BG 
      101.52        38.79        20.45        39.55        51.68        24.85 
TCGA-BH-A0BW TCGA-BH-A0C0 TCGA-BH-A0DD TCGA-BH-A0DL TCGA-BH-A0DZ TCGA-BH-A0E0 
       11.67        41.75        45.80        48.23        16.27         4.37 
TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A0GY TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G 
        9.60        31.00        30.15         5.59        12.23         2.01 
TCGA-BH-A18L TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18U TCGA-BH-A18V 
       26.66        55.63        37.51         7.36        51.39        51.12 
TCGA-BH-A1F2 TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FJ TCGA-BH-A1FM TCGA-BH-A1FN 
       31.53        97.48       114.12        63.35        45.63        72.07 
TCGA-BH-A203 TCGA-BH-A209 TCGA-C8-A1HJ TCGA-C8-A1HM TCGA-C8-A275 TCGA-C8-A278 
       38.60       130.16         0.16         0.20         0.03         0.03 
TCGA-C8-A27A TCGA-C8-A27B TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 
       12.20         0.99         6.90         2.01         5.65         0.07 
TCGA-D8-A1JA TCGA-D8-A1JC TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL 
        0.59         5.85         3.16         6.15         3.58         8.71 
TCGA-D8-A1X5 TCGA-D8-A1XF TCGA-D8-A1XJ TCGA-D8-A1XK TCGA-D8-A1XL TCGA-D8-A1XQ 
        5.62         6.48        11.57        10.72        10.49         5.82 
TCGA-D8-A1XT TCGA-D8-A1XV TCGA-D8-A1XW TCGA-D8-A1XZ TCGA-D8-A1Y3 TCGA-D8-A27F 
        6.35         4.80         3.85         3.95         4.08         7.46 
TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A14X TCGA-E2-A14Y 
       16.01        27.78        24.59        27.39        22.75        22.62 
TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A15A TCGA-E2-A1AZ TCGA-E2-A1B0 
       19.43        14.79        16.93        16.50        64.57        41.79 
TCGA-E2-A1B6 TCGA-E2-A1II TCGA-E2-A1L7 TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI 
       11.11        27.95        20.81        11.51        94.52        90.41 
TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1RB TCGA-E9-A1RH TCGA-E9-A243 
        8.75        33.34         7.86         0.69         0.46         1.41 
TCGA-E9-A244 TCGA-E9-A248 TCGA-E9-A2JS TCGA-EW-A1IZ TCGA-EW-A1OV TCGA-EW-A1OW 
        0.66         0.69         0.43         8.55        17.16        15.22 
TCGA-EW-A1P4 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PC TCGA-EW-A1PH TCGA-EW-A2FR 
       16.47         7.86        19.99         6.12         4.57        36.82 
TCGA-EW-A3U0 TCGA-GI-A2C9 TCGA-GM-A2DB TCGA-GM-A2DH TCGA-GM-A2DO TCGA-GM-A3XL 
        7.53        23.11        53.10        42.28        53.33        56.45 

subtype1 subtype2 subtype3 
    0.03     0.03     0.03 
subtype1 subtype2 subtype3 
  194.27   223.40   211.53 
subtype1 subtype2 subtype3 
  19.495   17.950   19.120 
[1] "0.0 - 194.3 (19.5)" "0.0 - 223.4 (17.9)" "0.0 - 211.5 (19.1)"
  [1] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [19] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
 [25] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
 [37] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [43] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [49] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [55] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
 [73] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
 [79] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
 [85] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
 [91] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [97] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[103] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[115] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[121] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[127] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[145] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[151] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[157] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[163] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[181] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[187] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[193] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[199] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[205] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[217] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[223] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[229] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[235] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[241] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[253] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[259] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[265] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[271] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[277] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[283] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[289] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[295] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[301] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[307] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[313] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[325] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[331] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[337] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[343] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[349] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[355] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[361] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[367] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[373] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[379] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[385] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[397] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[409] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[415] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[421] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[427] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[433] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[439] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[445] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[451] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[457] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[463] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[469] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[475] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[481] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[487] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[493] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[499] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
[505] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[511] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[517] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[523] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[529] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[535] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[541] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[547] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[553] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[559] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[565] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[571] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[577] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[583] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[589] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[595] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[601] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[607] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[613] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[619] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[625] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[631] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[637] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[643] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[649] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[655] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[661] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[667] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[673] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[679] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[685] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[697] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[703] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[709] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[715] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[721] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[727] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[733] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[739] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[745] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[751] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[757] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[763] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[769] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[775] "subtype2" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[781] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[787] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[793] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[799] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[805] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
  [1] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [19] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
 [25] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
 [37] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [43] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [49] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [55] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
 [73] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
 [79] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
 [85] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
 [91] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [97] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[103] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[115] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[121] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[127] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[145] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[151] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[157] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[163] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[181] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[187] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[193] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[199] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[205] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[217] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[223] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[229] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[235] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[241] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[253] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[259] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[265] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[271] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[277] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[283] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[289] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[295] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[301] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[307] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[313] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[325] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[331] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[337] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[343] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[349] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[355] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[361] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[367] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[373] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[379] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[385] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[397] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[409] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[415] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[421] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[427] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[433] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[439] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[445] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[451] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[457] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[463] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[469] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[475] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[481] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[487] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[493] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[499] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
[505] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[511] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[517] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[523] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[529] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[535] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[541] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[547] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[553] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[559] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[565] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[571] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[577] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[583] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[589] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[595] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[601] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[607] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[613] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[619] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[625] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[631] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[637] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[643] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[649] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[655] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[661] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[667] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[673] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[679] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[685] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[697] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[703] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[709] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[715] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[721] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[727] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[733] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[739] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[745] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[751] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[757] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[763] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[769] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[775] "subtype2" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[781] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[787] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[793] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[799] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[805] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
  [1] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [19] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
 [25] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
 [37] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [43] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [49] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [55] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
 [73] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
 [79] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
 [85] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
 [91] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [97] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[103] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[115] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[121] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[127] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[145] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[151] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[157] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[163] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[181] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[187] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[193] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[199] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[205] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[217] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[223] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[229] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[235] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[241] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[253] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[259] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[265] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[271] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[277] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[283] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[289] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[295] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[301] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[307] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[313] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[325] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[331] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[337] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[343] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[349] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[355] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[361] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[367] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[373] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[379] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[385] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[397] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[409] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[415] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[421] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[427] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[433] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[439] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[445] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[451] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[457] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[463] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[469] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[475] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[481] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[487] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[493] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[499] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
[505] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[511] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[517] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[523] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[529] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[535] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[541] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[547] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[553] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[559] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[565] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[571] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[577] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[583] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[589] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[595] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[601] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[607] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[613] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[619] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[625] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[631] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[637] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[643] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[649] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[655] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[661] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[667] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[673] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[679] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[685] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[697] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[703] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[709] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[715] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[721] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[727] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[733] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[739] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[745] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[751] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[757] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[763] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[769] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[775] "subtype2" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[781] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[787] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[793] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[799] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[805] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
D9V2, continuous
D9V3, binary
          cls
clus         0   1
  subtype1 218   0
  subtype2 393   6
  subtype3 248   3
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  218    0
  subtype2  393    6
  subtype3  248    3
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      218      393      248
  MALE          0        6        3
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                           127                             73
  subtype2                           322                             33
  subtype3                           228                              5
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   0                                6
  subtype2                   0                               16
  subtype3                   4                                4
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  3              9
  subtype2                  5             23
  subtype3                  2              8
D9V4, multiclass
D9V5, binary
          cls
clus         0   1
  subtype1  44 174
  subtype2 100 299
  subtype3  66 185
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   44  174
  subtype2  100  299
  subtype3   66  185
     clus
vv    subtype1 subtype2 subtype3
  NO        44      100       66
  YES      174      299      185
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        1 190   1  26
  subtype2        1 356   8  34
  subtype3        0 225   5  21
D9V6, multiclass
          vv
clus        N0 N0 (I+) N0 (I-) N0 (MOL+)  N1 N1A N1B N1C N1MI  N2 N2A  N3 N3A
  subtype1  61      11      27         1  27  30   8   1   10   6  15   8  11
  subtype2 110       7      63         0  47  73  13   1   11  26  20   7  11
  subtype3  84       4      41         0  29  26  11   0    3  18  18   3   8
          vv
clus       N3B N3C  NX
  subtype1   1   0   1
  subtype2   0   0  10
  subtype3   1   1   4
D9V7, multiclass
D9V8, continuous
D9V9, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      30       17        0        6        60        50         1
  subtype2      32       36        6        1       131        93         1
  subtype3      10       14        1        1       103        52         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         28          5         19        1         0       1
  subtype2         55         14         11        8         0      11
  subtype3         41          6         11        5         1       5
D9V10, multiclass

Clustering(10) Variable = MIRSEQ_CHIERARCHICAL
D10V1, survival
          sevent
clus2        0   1
  subtype1 295  37
  subtype2 240  20
  subtype3 179  38
subtype1 subtype2 subtype3 
     332      260      217 
subtype1 subtype2 subtype3 
      37       20       38 
$subtype1
TCGA-A1-A0SG TCGA-A1-A0SJ TCGA-A1-A0SQ TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A04W 
       14.24        14.01        18.18        77.72        63.12        63.06 
TCGA-A2-A04X TCGA-A2-A04Y TCGA-A2-A0CK TCGA-A2-A0CQ TCGA-A2-A0CT TCGA-A2-A0CU 
       44.35        25.08       125.56        78.64        63.02         5.16 
TCGA-A2-A0CW TCGA-A2-A0D1 TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0EO TCGA-A2-A0ER 
       57.53        25.84        16.31        90.64        71.70        62.53 
TCGA-A2-A0ET TCGA-A2-A0EY TCGA-A2-A0SU TCGA-A2-A0SW TCGA-A2-A0T1 TCGA-A2-A0T3 
       26.53        15.95        44.42        44.84        10.59        14.99 
TCGA-A2-A0YC TCGA-A2-A0YF TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A2-A1FV 
       21.14         9.50        13.28        12.46        23.77        15.12 
TCGA-A2-A1FW TCGA-A2-A1FX TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25E 
        7.27        30.74        12.23         8.48         9.37        82.55 
TCGA-A7-A0CD TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A13F TCGA-A7-A3IY 
        5.59         5.29         6.18         5.23         6.44         4.96 
TCGA-A7-A3J0 TCGA-A7-A3RF TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06T 
        2.50         1.78        13.02        13.02         1.02        41.06 
TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07F TCGA-A8-A07G 
       26.01         1.02        53.95         9.01        18.94        18.94 
TCGA-A8-A07I TCGA-A8-A07J TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S TCGA-A8-A07Z 
       14.01        12.00        17.00        10.98         7.96        28.04 
TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G TCGA-A8-A08I 
       15.06        36.95        13.02         0.99        19.92        12.00 
TCGA-A8-A08L TCGA-A8-A08O TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A091 TCGA-A8-A092 
        9.99        30.97        19.07        93.04        19.07        16.01 
TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A099 TCGA-A8-A09A TCGA-A8-A09C TCGA-A8-A09D 
       17.92        41.95         9.99         9.99         1.02        13.02 
TCGA-A8-A09E TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09Q TCGA-A8-A09R 
       30.97        33.07        29.95        15.02        25.02         8.98 
TCGA-A8-A09T TCGA-A8-A0A1 TCGA-A8-A0A2 TCGA-A8-A0A4 TCGA-A8-A0A7 TCGA-A8-A0A9 
       19.00        12.00        19.00        13.02         0.99        13.02 
TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AC-A23C TCGA-AC-A23H TCGA-AC-A2QH TCGA-AC-A3YJ 
       17.00        38.04         0.95         2.66         1.02         1.28 
TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A046 TCGA-AN-A04A TCGA-AN-A04D 
        0.33         0.33         0.23         0.33         2.93         1.71 
TCGA-AN-A0AK TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FF TCGA-AN-A0FK 
        7.33         0.16         0.30         6.41         4.60         6.97 
TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0FT TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR 
        7.17         6.28         6.02        12.33         0.30         0.33 
TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A03R 
        0.33         0.33         5.59        80.28        47.84        56.12 
TCGA-AO-A03T TCGA-AO-A03V TCGA-AO-A0J3 TCGA-AO-A0J5 TCGA-AO-A0J7 TCGA-AO-A0J8 
       39.02        29.13         9.93        24.16         8.55         9.11 
TCGA-AO-A0JA TCGA-AO-A0JB TCGA-AO-A0JC TCGA-AO-A0JD TCGA-AO-A0JG TCGA-AO-A0JM 
       11.38        37.81        50.86        59.61        14.76        60.03 
TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12H TCGA-AO-A1KP 
       99.22        93.70        77.56        65.52        28.34        82.62 
TCGA-AO-A1KQ TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A1H2 TCGA-AR-A0TQ TCGA-AR-A0TR 
       49.94        17.79        14.43         7.56        49.32         5.26 
TCGA-AR-A0TV TCGA-AR-A0TX TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A1AS 
       29.72         0.49        43.17        83.87        74.40        40.83 
TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A24H TCGA-AR-A24L TCGA-AR-A24M 
       41.82        42.58        35.24       109.58        73.02        65.42 
TCGA-AR-A24R TCGA-AR-A24U TCGA-AR-A24V TCGA-AR-A24X TCGA-AR-A24Z TCGA-AR-A250 
       57.37        53.36        54.18        48.16        51.75        56.12 
TCGA-AR-A252 TCGA-AR-A255 TCGA-B6-A0I8 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC 
       40.64        34.78        24.62       220.87       129.57        50.70 
TCGA-B6-A0IE TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0RG TCGA-B6-A0RH 
       65.69       126.12        84.59       110.14        68.45       188.98 
TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RV TCGA-B6-A0WT 
      223.40        81.17        78.02       172.96       157.41       177.40 
TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 
       79.63        17.95       129.57       129.70        28.24        68.94 
TCGA-B6-A1KC TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0AW TCGA-BH-A0AY TCGA-BH-A0AZ 
       43.59       109.48        24.53        20.45        25.55        28.50 
TCGA-BH-A0B1 TCGA-BH-A0B4 TCGA-BH-A0B8 TCGA-BH-A0BD TCGA-BH-A0BP TCGA-BH-A0BS 
       37.74        39.16        51.58        18.21        48.69        53.92 
TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0C0 TCGA-BH-A0C3 TCGA-BH-A0DH TCGA-BH-A0DK 
       45.57        49.94        41.75        48.13        38.01        13.91 
TCGA-BH-A0DQ TCGA-BH-A0E1 TCGA-BH-A0E7 TCGA-BH-A0EI TCGA-BH-A0H0 TCGA-BH-A0H5 
        3.22        15.68        44.78        24.43        15.16        35.51 
TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HK 
       24.56        23.05        41.00        28.14        26.50         5.85 
TCGA-BH-A0HL TCGA-BH-A0HN TCGA-BH-A0HO TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HY 
        2.37        16.96         2.50        12.89        51.29        28.50 
TCGA-BH-A0W3 TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18R TCGA-BH-A18S 
        5.92        26.66        37.74        30.28        37.51        66.05 
TCGA-BH-A1EN TCGA-BH-A1ES TCGA-BH-A1EV TCGA-BH-A1F2 TCGA-BH-A1F5 TCGA-BH-A1F8 
       67.46       113.82        12.00        31.53        89.16        24.62 
TCGA-BH-A1FG TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FR TCGA-BH-A204 
      122.89        63.35        55.00        45.63       144.59        83.31 
TCGA-C8-A1HI TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A26Z TCGA-C8-A27A 
        0.07         0.23         0.07         0.20         0.13        12.20 
TCGA-C8-A3M8 TCGA-D8-A13Y TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A1J8 TCGA-D8-A1J9 
        0.23         8.68         0.89         3.72         8.42         8.15 
TCGA-D8-A1JA TCGA-D8-A1JE TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1JS 
        0.59         1.87         0.69         9.01         7.13         3.45 
TCGA-D8-A1JT TCGA-D8-A1X5 TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1XA TCGA-D8-A1XC 
        4.04         5.62         7.76         2.79         9.01         2.66 
TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XG TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XT 
        5.10         6.48         6.44         7.96         5.52         6.35 
TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XY TCGA-D8-A1Y1 TCGA-D8-A1Y3 TCGA-D8-A27E 
        4.90         4.80         2.66         3.78         4.08         5.98 
TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10C TCGA-E2-A10E 
       38.24        51.12        38.53        11.57        28.04        13.74 
TCGA-E2-A14O TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14Z TCGA-E2-A152 TCGA-E2-A155 
       38.53        27.42        29.26        17.03        19.33        18.18 
TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15G TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K 
       15.81        16.50        10.36        13.51        15.22         1.12 
TCGA-E2-A15M TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1BC 
        7.69        12.99        10.85         9.01         8.78         9.76 
TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IN TCGA-E2-A1IO TCGA-E2-A1L7 TCGA-E2-A1L8 
       32.32        24.82        12.89        14.73        20.81        33.37 
TCGA-E2-A1L9 TCGA-E9-A1R2 TCGA-E9-A1R4 TCGA-E9-A1R5 TCGA-E9-A1R6 TCGA-E9-A1R7 
       12.76         0.62         0.95         1.38         2.76         1.12 
TCGA-E9-A1RC TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A1RI TCGA-E9-A245 
       40.37         1.55         1.25         1.15         1.58         0.82 
TCGA-E9-A247 TCGA-E9-A24A TCGA-EW-A1IZ TCGA-EW-A1J1 TCGA-EW-A1J6 TCGA-EW-A1OV 
        0.39         0.33         8.55         9.27        19.56        17.16 
TCGA-EW-A1OX TCGA-EW-A1OZ TCGA-EW-A1P0 TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PE 
       18.48        30.94        36.85        12.00        10.26         3.48 
TCGA-EW-A2FW TCGA-GM-A2DM 
        6.25        76.64 

$subtype2
TCGA-A1-A0SB TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SH TCGA-A1-A0SN 
        8.52        14.37        43.40        48.10        47.24        39.32 
TCGA-A2-A04N TCGA-A2-A0CO TCGA-A2-A0CP TCGA-A2-A0CV TCGA-A2-A0CZ TCGA-A2-A0D3 
      103.66       112.04        82.03        61.48        43.99        24.20 
TCGA-A2-A0EN TCGA-A2-A0ES TCGA-A2-A0EU TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0SY 
       82.68        32.91        24.10        25.32        18.05        37.94 
TCGA-A2-A0T4 TCGA-A2-A0T5 TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YD TCGA-A2-A0YI 
       12.99        10.55        11.31        13.05        18.08        11.77 
TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1FZ TCGA-A2-A1G0 TCGA-A2-A1G6 TCGA-A2-A259 
       10.98         8.81        13.45        12.49         4.34        42.25 
TCGA-A2-A25A TCGA-A2-A25D TCGA-A2-A25F TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A2-A3XZ 
       97.58         7.99         3.72        11.93        26.40        31.96 
TCGA-A7-A0CG TCGA-A7-A13G TCGA-A7-A13H TCGA-A7-A26E TCGA-A7-A26H TCGA-A7-A26J 
        5.46         6.84        18.12        13.84         2.10         2.20 
TCGA-A7-A2KD TCGA-A7-A3IZ TCGA-A7-A3J1 TCGA-A8-A07E TCGA-A8-A08Z TCGA-A8-A09B 
        5.95         4.87         2.47        19.99        40.01        12.00 
TCGA-A8-A09N TCGA-A8-A0A6 TCGA-AC-A23E TCGA-AC-A23G TCGA-AC-A2B8 TCGA-AC-A2BM 
        1.02        21.04         2.37        10.82         1.45        38.20 
TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FM TCGA-AC-A2FO 
        1.45        55.40        36.99        38.79        26.04        50.70 
TCGA-AC-A2QI TCGA-AC-A3BB TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AC-A3QP TCGA-AC-A3TN 
        0.92         0.99         0.69         1.15         9.40         1.12 
TCGA-AC-A3W6 TCGA-AC-A3YI TCGA-AN-A049 TCGA-AN-A0XL TCGA-AN-A0XV TCGA-AO-A03N 
        1.68         1.51         0.62         0.33         5.33        54.08 
TCGA-AO-A0J9 TCGA-AO-A0JF TCGA-AO-A0JI TCGA-AO-A0JJ TCGA-AO-A128 TCGA-AO-A12A 
       41.26        11.64        38.53        49.71        94.59        90.54 
TCGA-AO-A12E TCGA-AO-A12G TCGA-AO-A1KO TCGA-AQ-A1H3 TCGA-AR-A1AK TCGA-AR-A1AL 
       57.27        41.59        14.73         5.33        51.22        48.82 
TCGA-AR-A1AN TCGA-AR-A1AP TCGA-AR-A1AU TCGA-AR-A1AX TCGA-AR-A24K TCGA-AR-A24N 
       43.69        39.95        46.32        36.26        50.89        68.19 
TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A254 TCGA-AR-A2LE 
       65.65         0.85        53.26        50.96        39.85       128.65 
TCGA-AR-A2LH TCGA-AR-A2LK TCGA-AR-A2LL TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
       20.22        42.84         7.33        40.01        17.06        20.81 
TCGA-AR-A2LQ TCGA-B6-A0I5 TCGA-B6-A0IH TCGA-B6-A0IK TCGA-B6-A0IP TCGA-B6-A0RO 
       16.96       149.56       112.37        18.77       110.93       162.02 
TCGA-B6-A0RP TCGA-B6-A0RQ TCGA-B6-A0WS TCGA-B6-A1KI TCGA-B6-A2IU TCGA-BH-A0B0 
      102.77       140.48        97.48        48.10       159.12        46.92 
TCGA-BH-A0B5 TCGA-BH-A0B6 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BF TCGA-BH-A0BJ 
       48.36        56.94        37.22        32.02        25.68        21.70 
TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BQ TCGA-BH-A0BZ TCGA-BH-A0C1 TCGA-BH-A0C7 
       36.72        35.67        27.16        49.05        43.99        42.90 
TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DO TCGA-BH-A0DP TCGA-BH-A0DS 
       31.17        23.44        22.13        17.26        15.65         2.53 
TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0E2 TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0GZ 
       38.47        45.17        12.36        46.19        32.65        10.78 
TCGA-BH-A0H3 TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0HX 
       37.78        23.90        20.35        13.61        36.85        27.25 
TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A0W7 TCGA-BH-A18F TCGA-BH-A18I TCGA-BH-A18J 
        5.75        17.85        18.35         8.81         7.23        20.09 
TCGA-BH-A18K TCGA-BH-A18M TCGA-BH-A1EO TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EW 
       90.81        72.56        91.99        82.85        42.28        55.69 
TCGA-BH-A1EX TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FH TCGA-BH-A201 TCGA-BH-A28O 
       49.58       120.62        74.73        36.92         6.87        10.62 
TCGA-BH-A28Q TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A26V TCGA-C8-A26W TCGA-C8-A273 
        6.44         0.85         0.23         0.30         0.23         0.20 
TCGA-C8-A274 TCGA-C8-A3M7 TCGA-D8-A145 TCGA-D8-A146 TCGA-D8-A1JD TCGA-D8-A1JH 
        0.03         0.03         1.61        11.31         8.98         9.34 
TCGA-D8-A1JP TCGA-D8-A1JU TCGA-D8-A1X8 TCGA-D8-A1X9 TCGA-D8-A1XB TCGA-D8-A1XJ 
        5.49         3.48         8.94        12.49         6.61        11.57 
TCGA-D8-A1XL TCGA-D8-A1XM TCGA-D8-A1XS TCGA-D8-A1Y0 TCGA-D8-A1Y2 TCGA-D8-A27G 
       10.49         7.17         1.64         5.46         2.37         6.87 
TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L TCGA-D8-A27N TCGA-D8-A27P TCGA-D8-A27T 
        6.08         3.88         4.11         4.77         0.76         4.44 
TCGA-D8-A27V TCGA-D8-A27W TCGA-E2-A107 TCGA-E2-A108 TCGA-E2-A10B TCGA-E2-A10F 
        2.40         0.49        25.08         4.08        24.59        11.84 
TCGA-E2-A14Q TCGA-E2-A14U TCGA-E2-A14V TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A15C 
       32.02        27.55        24.59        19.27        10.68        16.31 
TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15F TCGA-E2-A15H TCGA-E2-A15L TCGA-E2-A15P 
       10.36        17.00        15.39         1.38        10.88        10.36 
TCGA-E2-A1B1 TCGA-E2-A1B4 TCGA-E2-A1B5 TCGA-E2-A1BD TCGA-E2-A1IF TCGA-E2-A1IH 
       44.75        29.95        25.45        10.42        31.43        21.63 
TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A2P5 
       23.84        17.03         0.46         4.18        43.13        10.72 
TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E9-A1R3 TCGA-E9-A1RA TCGA-E9-A1RB TCGA-E9-A1RD 
        5.49         7.13         2.10         0.95         0.69         0.66 
TCGA-E9-A226 TCGA-E9-A227 TCGA-E9-A249 TCGA-E9-A295 TCGA-E9-A2JS TCGA-E9-A2JT 
        0.53         0.79         0.92         0.69         0.43         0.76 
TCGA-E9-A3X8 TCGA-EW-A1IW TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1J2 TCGA-EW-A1J3 
        0.76         8.28        35.57         8.48         4.57         8.28 
TCGA-EW-A1J5 TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1PA TCGA-EW-A1PD TCGA-EW-A1PF 
        7.46        30.21        32.45         8.78         5.72         4.57 
TCGA-EW-A1PG TCGA-EW-A2FS TCGA-EW-A2FV TCGA-GI-A2C8 TCGA-GM-A2D9 TCGA-GM-A2DC 
       28.77        38.56         7.82         6.97        59.57        53.52 
TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NW 
       61.91        62.33        90.81        77.33        53.33        98.04 
TCGA-GM-A3NY TCGA-GM-A3XN 
       24.43        53.92 

$subtype3
TCGA-A1-A0SI TCGA-A1-A0SK TCGA-A1-A0SM TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P 
       20.84        31.79         7.96        28.01        19.17        17.98 
TCGA-A2-A04Q TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CS 
       41.92        64.11        22.03        60.07        24.79        75.55 
TCGA-A2-A0CY TCGA-A2-A0D0 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0EV TCGA-A2-A0ST 
       42.35        21.14        25.02        67.50        17.92        54.02 
TCGA-A2-A0SV TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YM TCGA-A2-A1G1 
       27.12        42.35        11.08         7.96        21.73        12.20 
TCGA-A2-A3XV TCGA-A2-A3XX TCGA-A2-A3Y0 TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A0DB 
       14.07        38.40        28.21         8.32        12.26         4.60 
TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I TCGA-A8-A06R 
        8.78         9.44         8.45         6.87         4.01        17.95 
TCGA-A8-A06U TCGA-A8-A075 TCGA-A8-A07B TCGA-A8-A07C TCGA-A8-A07O TCGA-A8-A07R 
       29.00        17.00        33.01        19.07         9.99         8.98 
TCGA-A8-A07U TCGA-A8-A07W TCGA-A8-A082 TCGA-A8-A08B TCGA-A8-A08J TCGA-A8-A08R 
        9.96         9.99        18.05        23.08        37.05         0.99 
TCGA-A8-A08X TCGA-A8-A097 TCGA-A8-A09X TCGA-AC-A2BK TCGA-AC-A2QJ TCGA-AN-A04C 
       33.99        12.00        14.01        38.53         2.27         1.78 
TCGA-AN-A0AJ TCGA-AN-A0AL TCGA-AN-A0AR TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL 
        7.99         6.48         0.30         0.33         7.92         7.56 
TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0FX TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0G0 
        0.33         0.36         0.33         0.33         0.33         0.53 
TCGA-AN-A0XN TCGA-AN-A0XU TCGA-AO-A03O TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J4 
        0.33         0.33        81.63        59.05        19.23         9.67 
TCGA-AO-A0J6 TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D 
       25.48        64.60        43.36       102.54        96.10        64.04 
TCGA-AO-A12F TCGA-AO-A1KR TCGA-AO-A1KS TCGA-AQ-A04J TCGA-AQ-A04L TCGA-AQ-A0Y5 
       48.36        70.36         0.53         5.23       110.43         5.62 
TCGA-AR-A0TP TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TY TCGA-AR-A0U1 TCGA-AR-A0U4 
       78.64        37.41        55.20        55.86         6.08        53.49 
TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR 
       75.55        61.84        52.73        43.53        43.04        17.19 
TCGA-AR-A1AY TCGA-AR-A24Q TCGA-AR-A24S TCGA-AR-A251 TCGA-AR-A256 TCGA-AR-A2LR 
       20.19        66.02        62.07        45.14        93.83        20.38 
TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0I9 TCGA-B6-A0IG TCGA-B6-A0IJ 
       77.62       125.79        32.58        12.13       146.50       176.98 
TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX 
      127.27       211.53       100.67        89.46       131.21        21.47 
TCGA-B6-A0WY TCGA-B6-A0X7 TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0B3 TCGA-BH-A0B7 
      113.75        58.88       101.52        38.79        39.55        56.98 
TCGA-BH-A0B9 TCGA-BH-A0BG TCGA-BH-A0BL TCGA-BH-A0BR TCGA-BH-A0BW TCGA-BH-A0DD 
       51.68        24.85        44.02        53.65        11.67        45.80 
TCGA-BH-A0DL TCGA-BH-A0DX TCGA-BH-A0DZ TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0EE 
       48.23        47.41        16.27         4.37         9.60        31.00 
TCGA-BH-A0GY TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18Q TCGA-BH-A18T 
       30.15         5.59        12.23         2.01        55.63         7.36 
TCGA-BH-A18U TCGA-BH-A18V TCGA-BH-A1EY TCGA-BH-A1F0 TCGA-BH-A1F6 TCGA-BH-A1FC 
       51.39        51.12        17.69        25.81        97.48       114.12 
TCGA-BH-A1FN TCGA-BH-A1FU TCGA-BH-A202 TCGA-BH-A203 TCGA-BH-A208 TCGA-BH-A209 
       72.07        72.07         0.72        38.60        57.83       130.16 
TCGA-C8-A1HJ TCGA-C8-A1HN TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A275 TCGA-C8-A278 
        0.16         0.07         0.36         0.43         0.03         0.03 
TCGA-C8-A27B TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1JC 
        0.99         6.90         2.01         5.65         0.07         5.85 
TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1XK TCGA-D8-A1XQ 
        3.16         6.15         3.58         8.71        10.72         5.82 
TCGA-D8-A1XW TCGA-D8-A1XZ TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M TCGA-D8-A27R 
        3.85         3.95         7.46         4.60         4.73         2.96 
TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14W TCGA-E2-A14X TCGA-E2-A14Y 
       44.38        16.01        27.78        27.39        22.75        22.62 
TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B6 
       19.43        14.79        16.93        64.57        41.79        11.11 
TCGA-E2-A1II TCGA-E2-A1LA TCGA-E2-A1LB TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH 
       27.95        15.22        31.96        28.90        11.51        94.52 
TCGA-E2-A1LI TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1RH TCGA-E9-A243 
       90.41         8.75        33.34         7.86         0.46         1.41 
TCGA-E9-A244 TCGA-E9-A248 TCGA-EW-A1OW TCGA-EW-A1OY TCGA-EW-A1P4 TCGA-EW-A1P7 
        0.66         0.69        15.22        19.50        16.47        20.88 
TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PC TCGA-EW-A1PH TCGA-EW-A2FR TCGA-EW-A3U0 
        7.86        19.99         6.12         4.57        36.82         7.53 
TCGA-GI-A2C9 TCGA-GM-A2DA TCGA-GM-A2DB TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DH 
       23.11       194.27        53.10        43.04        42.71        42.28 
TCGA-GM-A3XL 
       56.45 

subtype1 subtype2 subtype3 
    0.07     0.03     0.03 
subtype1 subtype2 subtype3 
  223.40   162.02   211.53 
subtype1 subtype2 subtype3 
  17.015   18.065   20.840 
[1] "0.1 - 223.4 (17.0)" "0.0 - 162.0 (18.1)" "0.0 - 211.5 (20.8)"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
  [7] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
 [13] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
 [19] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [25] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
 [31] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [37] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
 [43] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
 [49] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
 [61] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
 [67] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [73] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
 [79] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
 [97] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[103] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[109] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[115] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[121] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[127] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[133] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[139] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[145] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[151] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[157] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[163] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[169] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[175] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[181] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[187] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[199] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[205] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[211] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[217] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[223] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[229] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[235] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[241] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[253] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[259] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[265] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[271] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[277] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[289] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
[295] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[301] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[307] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[313] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[319] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[325] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[331] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[337] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[343] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[349] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[355] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[361] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[373] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[379] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[385] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[391] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[397] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[403] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[409] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[415] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[421] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[427] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[433] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[439] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[445] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[451] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[457] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[463] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[469] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[475] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[481] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[487] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[493] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[499] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[505] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[511] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[517] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[523] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[529] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[535] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[541] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[547] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[553] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[559] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[565] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[571] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[577] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[583] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[589] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[595] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[601] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[607] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[613] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[619] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[625] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[631] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[637] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[643] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[649] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[655] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[661] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[667] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[673] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[679] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[685] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[691] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[697] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[703] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[709] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[715] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[721] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[727] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[733] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[739] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[745] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[751] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[757] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[763] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[769] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[775] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[781] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[787] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[793] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[799] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[805] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
  [7] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
 [13] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
 [19] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [25] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
 [31] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [37] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
 [43] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
 [49] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
 [61] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
 [67] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [73] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
 [79] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
 [97] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[103] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[109] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[115] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[121] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[127] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[133] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[139] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[145] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[151] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[157] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[163] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[169] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[175] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[181] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[187] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[199] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[205] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[211] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[217] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[223] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[229] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[235] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[241] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[253] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[259] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[265] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[271] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[277] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[289] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
[295] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[301] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[307] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[313] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[319] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[325] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[331] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[337] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[343] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[349] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[355] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[361] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[373] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[379] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[385] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[391] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[397] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[403] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[409] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[415] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[421] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[427] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[433] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[439] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[445] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[451] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[457] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[463] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[469] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[475] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[481] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[487] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[493] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[499] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[505] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[511] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[517] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[523] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[529] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[535] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[541] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[547] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[553] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[559] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[565] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[571] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[577] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[583] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[589] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[595] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[601] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[607] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[613] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[619] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[625] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[631] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[637] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[643] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[649] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[655] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[661] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[667] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[673] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[679] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[685] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[691] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[697] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[703] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[709] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[715] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[721] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[727] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[733] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[739] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[745] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[751] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[757] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[763] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[769] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[775] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[781] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[787] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[793] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[799] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[805] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
  [7] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
 [13] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
 [19] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [25] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
 [31] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [37] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
 [43] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
 [49] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
 [61] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
 [67] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [73] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
 [79] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
 [97] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[103] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[109] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[115] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[121] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[127] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[133] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[139] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[145] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[151] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[157] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[163] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[169] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[175] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[181] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[187] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[199] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[205] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[211] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[217] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[223] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[229] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[235] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[241] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[253] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[259] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[265] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[271] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[277] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[289] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
[295] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[301] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[307] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[313] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[319] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[325] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[331] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[337] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[343] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[349] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[355] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[361] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[373] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[379] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[385] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[391] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[397] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[403] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[409] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[415] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[421] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[427] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[433] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[439] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[445] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[451] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[457] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[463] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[469] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[475] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[481] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[487] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[493] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[499] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[505] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[511] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[517] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[523] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[529] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[535] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[541] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[547] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[553] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[559] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[565] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[571] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[577] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[583] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[589] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[595] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[601] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[607] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[613] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[619] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[625] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[631] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[637] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[643] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[649] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[655] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[661] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[667] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[673] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[679] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[685] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[691] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[697] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[703] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[709] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[715] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[721] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[727] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[733] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[739] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[745] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[751] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[757] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[763] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[769] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[775] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[781] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[787] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[793] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[799] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[805] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
D10V2, continuous
D10V3, binary
          cls
clus         0   1
  subtype1 365   4
  subtype2 267   2
  subtype3 227   3
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  365    4
  subtype2  267    2
  subtype3  227    3
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      365      267      227
  MALE          4        2        3
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                           303                             17
  subtype2                           163                             91
  subtype3                           211                              3
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   0                               18
  subtype2                   0                                6
  subtype3                   4                                2
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  8             23
  subtype2                  2              7
  subtype3                  0             10
D10V4, multiclass
D10V5, binary
          cls
clus         0   1
  subtype1  88 281
  subtype2  64 205
  subtype3  58 172
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   88  281
  subtype2   64  205
  subtype3   58  172
     clus
vv    subtype1 subtype2 subtype3
  NO        88       64       58
  YES      281      205      172
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        1 336   5  27
  subtype2        1 227   2  39
  subtype3        0 208   7  15
D10V6, multiclass
          vv
clus        N0 N0 (I+) N0 (I-) N0 (MOL+)  N1 N1A N1B N1C N1MI  N2 N2A  N3 N3A
  subtype1 103       5      50         0  48  62  15   1   11  28  20   7   8
  subtype2  72      12      37         1  30  46   7   0   12  10  19   8  13
  subtype3  80       5      44         0  25  21  10   1    1  12  14   3   9
          vv
clus       N3B N3C  NX
  subtype1   0   0  11
  subtype2   1   0   1
  subtype3   1   1   3
D10V7, multiclass
D10V8, continuous
D10V9, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      26       29        6        0       123        83         0
  subtype2      31       23        0        6        74        66         2
  subtype3      15       15        1        2        97        46         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         61         13         11        5         1      11
  subtype2         35          9         19        2         0       2
  subtype3         28          3         11        7         0       4
D10V10, multiclass

Clustering(11) Variable = MIRSEQ_MATURE_CNMF
D11V1, survival
          sevent
clus2        0   1
  subtype1 169  23
  subtype2 144  15
  subtype3 125  20
subtype1 subtype2 subtype3 
     192      159      145 
subtype1 subtype2 subtype3 
      23       15       20 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SG TCGA-A1-A0SI TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04W 
        8.52        14.24        20.84        39.32        18.18        63.06 
TCGA-A2-A0CS TCGA-A2-A0D3 TCGA-A2-A0T3 TCGA-A2-A1FW TCGA-A2-A1FZ TCGA-A2-A1G4 
       75.55        24.20        14.99         7.27        13.45        12.23 
TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25E TCGA-A7-A13F TCGA-A7-A26E TCGA-A7-A26J 
        8.48         9.37        82.55         6.44        13.84         2.20 
TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A23H TCGA-AO-A03V TCGA-AO-A12A TCGA-AO-A12B 
        0.95         2.37         2.66        29.13        90.54        77.56 
TCGA-AO-A12H TCGA-AO-A1KP TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A1H2 TCGA-AR-A0TY 
       28.34        82.62         0.53        17.79         7.56        55.86 
TCGA-AR-A1AN TCGA-AR-A1AP TCGA-AR-A1AS TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A1AW 
       43.69        39.95        40.83        41.82        42.58        35.24 
TCGA-AR-A24L TCGA-AR-A24M TCGA-AR-A24N TCGA-AR-A24R TCGA-AR-A24V TCGA-AR-A24X 
       73.02        65.42        68.19        57.37        54.18        48.16 
TCGA-AR-A24Z TCGA-AR-A250 TCGA-AR-A252 TCGA-AR-A255 TCGA-B6-A0RH TCGA-B6-A0WS 
       51.75        56.12        40.64        34.78       188.98        97.48 
TCGA-B6-A0X0 TCGA-B6-A1KI TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0B0 TCGA-BH-A0B5 
      129.70        48.10       109.48        24.53        46.92        48.36 
TCGA-BH-A0B7 TCGA-BH-A0BP TCGA-BH-A0BR TCGA-BH-A0BS TCGA-BH-A0C1 TCGA-BH-A0C7 
       56.98        48.69        53.65        53.92        43.99        42.90 
TCGA-BH-A0DX TCGA-BH-A0EI TCGA-BH-A0HA TCGA-BH-A0HN TCGA-BH-A18F TCGA-BH-A18I 
       47.41        24.43        28.14        16.96         8.81         7.23 
TCGA-BH-A18J TCGA-BH-A18K TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-BH-A1EN 
       20.09        90.81        37.74        30.28        66.05        67.46 
TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EV TCGA-BH-A1EY TCGA-BH-A1F2 TCGA-BH-A1F5 
      113.82        82.85        12.00        17.69        31.53        89.16 
TCGA-BH-A1F8 TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FR TCGA-BH-A201 
       24.62        63.35        55.00        45.63       144.59         6.87 
TCGA-BH-A202 TCGA-BH-A204 TCGA-BH-A208 TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HI 
        0.72        83.31        57.83         0.85         0.23         0.07 
TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HN TCGA-D8-A13Y TCGA-D8-A140 TCGA-D8-A141 
        0.23         0.07         0.07         8.68         0.89         3.72 
TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JI 
        8.42         8.15         5.85         8.98         1.87         0.69 
TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1X5 
        9.01         7.13         5.49         3.45         4.04         5.62 
TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XD 
        7.76         2.79         9.01         6.61         2.66         5.10 
TCGA-D8-A1XG TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XU TCGA-D8-A1XV 
        6.44         7.96         5.52         1.64         4.90         4.80 
TCGA-D8-A1XY TCGA-D8-A1Y0 TCGA-D8-A1Y1 TCGA-D8-A27V TCGA-E2-A10A TCGA-E2-A14O 
        2.66         5.46         3.78         2.40        11.57        38.53 
TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A152 TCGA-E2-A153 
       27.42        29.26        24.59        27.39        19.33        19.27 
TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15G 
       10.68        18.18        15.81        16.31        10.36        10.36 
TCGA-E2-A15H TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15R 
        1.38        13.51        15.22        10.88        12.99        10.85 
TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1BC TCGA-E2-A1BD TCGA-E2-A1IE 
        9.01         8.78        29.95         9.76        10.42        32.32 
TCGA-E2-A1IF TCGA-E2-A1IG TCGA-E2-A1IJ TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO 
       31.43        24.82        23.84         0.46        12.89        14.73 
TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E2-A1LB 
        4.18        43.13        33.37        12.76        15.22        31.96 
TCGA-E9-A1R4 TCGA-E9-A1R5 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RA TCGA-E9-A1RC 
        0.95         1.38         2.76         1.12         0.95        40.37 
TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A1RI TCGA-E9-A247 TCGA-E9-A249 
        1.55         1.25         1.15         1.58         0.39         0.92 
TCGA-E9-A24A TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1J1 TCGA-EW-A1J3 TCGA-EW-A1J5 
        0.33        35.57         8.48         9.27         8.28         7.46 
TCGA-EW-A1J6 TCGA-EW-A1OV TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ TCGA-EW-A1P0 
       19.56        17.16        18.48        19.50        30.94        36.85 
TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PD TCGA-EW-A1PE TCGA-EW-A1PF TCGA-EW-A2FW 
       12.00        10.26         5.72         3.48         4.57         6.25 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SF TCGA-A2-A04N TCGA-A2-A0CK TCGA-A2-A0CO TCGA-A2-A0CV 
       14.37        48.10       103.66       125.56       112.04        61.48 
TCGA-A2-A0ES TCGA-A2-A0EW TCGA-A2-A1FV TCGA-A2-A1FX TCGA-A2-A1G0 TCGA-A2-A1G6 
       32.91        25.32        15.12        30.74        12.49         4.34 
TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25D TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A2-A3XZ 
       42.25        97.58         7.99        11.93        26.40        31.96 
TCGA-A7-A13G TCGA-A7-A13H TCGA-A7-A26H TCGA-A7-A3IY TCGA-A7-A3IZ TCGA-A7-A3J1 
        6.84        18.12         2.10         4.96         4.87         2.47 
TCGA-AC-A23G TCGA-AC-A2B8 TCGA-AC-A2BM TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG 
       10.82         1.45        38.20         1.45        55.40        36.99 
TCGA-AC-A2FK TCGA-AC-A2FM TCGA-AC-A2FO TCGA-AC-A2QI TCGA-AC-A3BB TCGA-AC-A3HN 
       38.79        26.04        50.70         0.92         0.99         0.69 
TCGA-AC-A3OD TCGA-AC-A3QP TCGA-AC-A3TN TCGA-AC-A3W6 TCGA-AC-A3YI TCGA-AC-A3YJ 
        1.15         9.40         1.12         1.68         1.51         1.28 
TCGA-AO-A1KO TCGA-AQ-A1H3 TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AU TCGA-AR-A1AX 
       14.73         5.33        51.22        48.82        46.32        36.26 
TCGA-AR-A24K TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A2LE 
       50.89        65.65         0.85        53.26        50.96       128.65 
TCGA-AR-A2LH TCGA-AR-A2LK TCGA-AR-A2LL TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
       20.22        42.84         7.33        40.01        17.06        20.81 
TCGA-AR-A2LQ TCGA-B6-A0IH TCGA-B6-A0RQ TCGA-B6-A2IU TCGA-BH-A0AZ TCGA-BH-A0B6 
       16.96       112.37       140.48       159.12        28.50        56.94 
TCGA-BH-A0BO TCGA-BH-A0BQ TCGA-BH-A0BZ TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG 
       35.67        27.16        49.05        48.13        31.17        23.44 
TCGA-BH-A0DI TCGA-BH-A0DO TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0E2 TCGA-BH-A0E9 
       22.13        17.26        38.47        45.17        12.36        46.19 
TCGA-BH-A0EA TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A0HL TCGA-BH-A0W7 TCGA-BH-A18M 
       32.65        37.78        35.51         2.37        18.35        72.56 
TCGA-BH-A1EO TCGA-BH-A1EU TCGA-BH-A1EW TCGA-BH-A1EX TCGA-BH-A1FB TCGA-BH-A1FE 
       91.99        42.28        55.69        49.58       120.62        74.73 
TCGA-BH-A1FG TCGA-BH-A1FH TCGA-BH-A28O TCGA-BH-A28Q TCGA-C8-A26W TCGA-C8-A26Z 
      122.89        36.92        10.62         6.44         0.23         0.13 
TCGA-C8-A273 TCGA-C8-A274 TCGA-C8-A3M7 TCGA-C8-A3M8 TCGA-D8-A145 TCGA-D8-A146 
        0.20         0.03         0.03         0.23         1.61        11.31 
TCGA-D8-A1JH TCGA-D8-A1JU TCGA-D8-A1X8 TCGA-D8-A1X9 TCGA-D8-A1XM TCGA-D8-A1Y2 
        9.34         3.48         8.94        12.49         7.17         2.37 
TCGA-D8-A27E TCGA-D8-A27G TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L TCGA-D8-A27N 
        5.98         6.87         6.08         3.88         4.11         4.77 
TCGA-D8-A27P TCGA-D8-A27R TCGA-D8-A27T TCGA-D8-A27W TCGA-E2-A14Q TCGA-E2-A14U 
        0.76         2.96         4.44         0.49        32.02        27.55 
TCGA-E2-A15E TCGA-E2-A15F TCGA-E2-A15M TCGA-E2-A15P TCGA-E2-A1B1 TCGA-E2-A1B5 
       17.00        15.39         7.69        10.36        44.75        25.45 
TCGA-E2-A1IH TCGA-E2-A1IK TCGA-E2-A2P5 TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E9-A1R3 
       21.63        17.03        10.72         5.49         7.13         2.10 
TCGA-E9-A1RD TCGA-E9-A226 TCGA-E9-A227 TCGA-E9-A245 TCGA-E9-A295 TCGA-E9-A2JT 
        0.66         0.53         0.79         0.82         0.69         0.76 
TCGA-E9-A3X8 TCGA-EW-A1IW TCGA-EW-A1J2 TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1PA 
        0.76         8.28         4.57        30.21        32.45         8.78 
TCGA-EW-A1PG TCGA-EW-A2FS TCGA-EW-A2FV TCGA-GI-A2C8 TCGA-GM-A2D9 TCGA-GM-A2DA 
       28.77        38.56         7.82         6.97        59.57       194.27 
TCGA-GM-A2DC TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DM TCGA-GM-A2DN 
       53.52        61.91        62.33        90.81        76.64        77.33 
TCGA-GM-A3NW TCGA-GM-A3NY TCGA-GM-A3XN 
       98.04        24.43        53.92 

$subtype3
TCGA-A2-A04U TCGA-A2-A0CL TCGA-A2-A0CW TCGA-A2-A1G1 TCGA-A2-A25F TCGA-A2-A3XV 
       22.03        60.07        57.53        12.20         3.72        14.07 
TCGA-A2-A3XX TCGA-A2-A3Y0 TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F 
       38.40        28.21        12.26         8.78         9.44         8.45 
TCGA-A7-A26G TCGA-A7-A26I TCGA-A7-A2KD TCGA-A7-A3J0 TCGA-A7-A3RF TCGA-AC-A2BK 
        6.87         4.01         5.95         2.50         1.78        38.53 
TCGA-AC-A2QH TCGA-AC-A2QJ TCGA-AN-A0AT TCGA-AO-A12D TCGA-AO-A12F TCGA-AO-A1KQ 
        1.02         2.27         0.33        64.04        48.36        49.94 
TCGA-AO-A1KR TCGA-AQ-A0Y5 TCGA-AR-A0TS TCGA-AR-A0U1 TCGA-AR-A1AH TCGA-AR-A1AI 
       70.36         5.62        37.41         6.08        75.55        61.84 
TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-AR-A24H 
       52.73        43.53        43.04        17.19        20.19       109.58 
TCGA-AR-A24Q TCGA-AR-A24S TCGA-AR-A24U TCGA-AR-A251 TCGA-AR-A254 TCGA-AR-A256 
       66.02        62.07        53.36        45.14        39.85        93.83 
TCGA-AR-A2LR TCGA-B6-A0I1 TCGA-B6-A1KC TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0BF 
       20.38        77.62        43.59       101.52        38.79        25.68 
TCGA-BH-A0BG TCGA-BH-A0BL TCGA-BH-A0BT TCGA-BH-A0BW TCGA-BH-A0DD TCGA-BH-A0DL 
       24.85        44.02        45.57        11.67        45.80        48.23 
TCGA-BH-A18G TCGA-BH-A18L TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18U 
        2.01        26.66        55.63        37.51         7.36        51.39 
TCGA-BH-A18V TCGA-BH-A1F0 TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FN TCGA-BH-A1FU 
       51.12        25.81        97.48       114.12        72.07        72.07 
TCGA-BH-A203 TCGA-BH-A209 TCGA-C8-A1HJ TCGA-C8-A1HM TCGA-C8-A26V TCGA-C8-A26X 
       38.60       130.16         0.16         0.20         0.30         0.36 
TCGA-C8-A26Y TCGA-C8-A275 TCGA-C8-A278 TCGA-C8-A27A TCGA-C8-A27B TCGA-D8-A13Z 
        0.43         0.03         0.03        12.20         0.99         6.90 
TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1JA TCGA-D8-A1JF TCGA-D8-A1JG 
        2.01         5.65         0.07         0.59         3.16         6.15 
TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1XF TCGA-D8-A1XJ TCGA-D8-A1XK TCGA-D8-A1XL 
        3.58         8.71         6.48        11.57        10.72        10.49 
TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW TCGA-D8-A1XZ TCGA-D8-A1Y3 TCGA-D8-A27F 
        5.82         6.35         3.85         3.95         4.08         7.46 
TCGA-D8-A27H TCGA-D8-A27M TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14X 
        4.60         4.73        44.38        16.01        27.78        22.75 
TCGA-E2-A14Y TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A15A 
       22.62        17.03        19.43        14.79        16.93        16.50 
TCGA-E2-A15K TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B6 TCGA-E2-A1II TCGA-E2-A1L7 
        1.12        64.57        41.79        11.11        27.95        20.81 
TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK TCGA-E2-A1LL 
       28.90        11.51        94.52        90.41         8.75        33.34 
TCGA-E2-A1LS TCGA-E9-A1R2 TCGA-E9-A1RB TCGA-E9-A1RH TCGA-E9-A243 TCGA-E9-A244 
        7.86         0.62         0.69         0.46         1.41         0.66 
TCGA-E9-A248 TCGA-E9-A2JS TCGA-EW-A1IZ TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P7 
        0.69         0.43         8.55        15.22        16.47        20.88 
TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PC TCGA-EW-A1PH TCGA-EW-A2FR TCGA-EW-A3U0 
        7.86        19.99         6.12         4.57        36.82         7.53 
TCGA-GI-A2C9 TCGA-GM-A2DB TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DH TCGA-GM-A2DO 
       23.11        53.10        43.04        42.71        42.28        53.33 
TCGA-GM-A3XL 
       56.45 

subtype1 subtype2 subtype3 
    0.07     0.03     0.03 
subtype1 subtype2 subtype3 
  188.98   194.27   130.16 
subtype1 subtype2 subtype3 
  14.485   18.120   16.930 
[1] "0.1 - 189.0 (14.5)" "0.0 - 194.3 (18.1)" "0.0 - 130.2 (16.9)"
  [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
 [13] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
 [19] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
 [25] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
 [43] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
 [49] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
 [55] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
 [61] "subtype1" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [85] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [91] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
 [97] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[103] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[109] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[115] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[121] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[127] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[133] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[139] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[151] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[163] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[169] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[175] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[181] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[193] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[199] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[211] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[217] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[229] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[235] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[241] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[247] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[253] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[259] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[265] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[271] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[277] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[283] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[289] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[295] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[301] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[307] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[313] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[319] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[325] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[331] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[337] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[343] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[349] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[355] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[361] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[367] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[373] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[379] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[385] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[391] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[397] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[403] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[409] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[415] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[421] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[427] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[433] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[445] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[451] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[457] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[463] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[469] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[475] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[481] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[487] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[493] "subtype2" "subtype2" "subtype3" "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
 [13] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
 [19] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
 [25] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
 [43] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
 [49] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
 [55] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
 [61] "subtype1" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [85] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [91] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
 [97] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[103] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[109] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[115] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[121] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[127] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[133] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[139] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[151] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[163] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[169] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[175] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[181] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[193] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[199] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[211] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[217] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[229] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[235] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[241] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[247] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[253] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[259] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[265] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[271] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[277] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[283] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[289] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[295] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[301] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[307] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[313] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[319] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[325] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[331] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[337] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[343] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[349] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[355] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[361] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[367] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[373] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[379] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[385] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[391] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[397] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[403] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[409] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[415] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[421] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[427] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[433] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[445] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[451] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[457] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[463] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[469] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[475] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[481] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[487] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[493] "subtype2" "subtype2" "subtype3" "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
 [13] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
 [19] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
 [25] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
 [43] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
 [49] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
 [55] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
 [61] "subtype1" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [85] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [91] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
 [97] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[103] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[109] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[115] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[121] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[127] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[133] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[139] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[151] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[163] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[169] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[175] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[181] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[193] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[199] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[211] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[217] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[229] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[235] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[241] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[247] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[253] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[259] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[265] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[271] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[277] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[283] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[289] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[295] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[301] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[307] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[313] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[319] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[325] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[331] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[337] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[343] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[349] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[355] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[361] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[367] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[373] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[379] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[385] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[391] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[397] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[403] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[409] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[415] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[421] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[427] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[433] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[445] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[451] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[457] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[463] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[469] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[475] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[481] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[487] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[493] "subtype2" "subtype2" "subtype3" "subtype2"
D11V2, continuous
D11V3, binary
          cls
clus         0   1
  subtype1 210   4
  subtype2 164   0
  subtype3 166   2
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  210    4
  subtype2  164    0
  subtype3  166    2
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      210      164      166
  MALE          4        0        2
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                           171                             14
  subtype2                            86                             67
  subtype3                           148                              4
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   0                               10
  subtype2                   0                                4
  subtype3                   4                                3
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  5             14
  subtype2                  3              4
  subtype3                  2              7
D11V4, multiclass
D11V5, binary
          cls
clus         0   1
  subtype1  47 167
  subtype2  27 137
  subtype3  37 131
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   47  167
  subtype2   27  137
  subtype3   37  131
     clus
vv    subtype1 subtype2 subtype3
  NO        47       27       37
  YES      167      137      131
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        1 189   2  22
  subtype2        1 133   1  29
  subtype3        0 149   0  19
D11V6, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N0 (MOL+) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3B
  subtype1 75       1      20         1 31  36   8   1    8 13  10  2   4   0
  subtype2 51       4      17         0 19  27   6   0    8  5  11  6   8   1
  subtype3 71       3      15         0 25  14   4   1    4 11  12  2   4   1
          vv
clus       NX
  subtype1  4
  subtype2  1
  subtype3  1
D11V7, multiclass
D11V8, continuous
D11V9, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      28       19        2        1        69        49         0
  subtype2      21       13        0        6        40        43         2
  subtype3      15        5        0        1        75        33         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE X
  subtype1         31          6          5        2       2
  subtype2         21          3         14        1       0
  subtype3         25          3          7        0       3
D11V10, multiclass

Clustering(12) Variable = MIRSEQ_MATURE_CHIERARCHICAL
D12V1, survival
          sevent
clus2        0   1
  subtype1  96   7
  subtype2  91  11
  subtype3 101  19
  subtype4 150  21
subtype1 subtype2 subtype3 subtype4 
     103      102      120      171 
subtype1 subtype2 subtype3 subtype4 
       7       11       19       21 
$subtype1
TCGA-A2-A0CK TCGA-A2-A0CO TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25D TCGA-A2-A3KC 
      125.56       112.04        42.25        97.58         7.99        11.93 
TCGA-A2-A3KD TCGA-A7-A13G TCGA-A7-A13H TCGA-A7-A26H TCGA-A7-A3IZ TCGA-A7-A3J1 
       26.40         6.84        18.12         2.10         4.87         2.47 
TCGA-AC-A23G TCGA-AC-A2BM TCGA-AC-A2FB TCGA-AC-A2FK TCGA-AC-A2FM TCGA-AC-A2FO 
       10.82        38.20         1.45        38.79        26.04        50.70 
TCGA-AC-A2QI TCGA-AC-A3BB TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AC-A3QP TCGA-AC-A3TN 
        0.92         0.99         0.69         1.15         9.40         1.12 
TCGA-AC-A3W6 TCGA-AC-A3YI TCGA-AR-A1AX TCGA-AR-A24K TCGA-AR-A2LE TCGA-AR-A2LH 
        1.68         1.51        36.26        50.89       128.65        20.22 
TCGA-AR-A2LK TCGA-AR-A2LL TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO TCGA-AR-A2LQ 
       42.84         7.33        40.01        17.06        20.81        16.96 
TCGA-B6-A0RQ TCGA-B6-A2IU TCGA-BH-A0B6 TCGA-BH-A0DV TCGA-BH-A1EW TCGA-BH-A203 
      140.48       159.12        56.94        45.17        55.69        38.60 
TCGA-BH-A28O TCGA-BH-A28Q TCGA-C8-A26V TCGA-C8-A26W TCGA-C8-A26X TCGA-C8-A26Y 
       10.62         6.44         0.30         0.23         0.36         0.43 
TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A274 TCGA-C8-A275 TCGA-C8-A3M7 TCGA-D8-A145 
        0.13         0.20         0.03         0.03         0.03         1.61 
TCGA-D8-A1X8 TCGA-D8-A1X9 TCGA-D8-A1XJ TCGA-D8-A1XL TCGA-D8-A1XM TCGA-D8-A1Y2 
        8.94        12.49        11.57        10.49         7.17         2.37 
TCGA-D8-A27G TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L TCGA-D8-A27N TCGA-D8-A27R 
        6.87         6.08         3.88         4.11         4.77         2.96 
TCGA-D8-A27T TCGA-D8-A27V TCGA-D8-A27W TCGA-E2-A14U TCGA-E2-A14Z TCGA-E2-A15E 
        4.44         2.40         0.49        27.55        17.03        17.00 
TCGA-E2-A15F TCGA-E2-A1LE TCGA-E2-A2P5 TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E9-A1R2 
       15.39        28.90        10.72         5.49         7.13         0.62 
TCGA-E9-A1R3 TCGA-E9-A1RB TCGA-E9-A1RD TCGA-E9-A226 TCGA-E9-A295 TCGA-E9-A2JS 
        2.10         0.69         0.66         0.53         0.69         0.43 
TCGA-E9-A2JT TCGA-E9-A3X8 TCGA-EW-A1PA TCGA-EW-A2FV TCGA-GI-A2C8 TCGA-GM-A2D9 
        0.76         0.76         8.78         7.82         6.97        59.57 
TCGA-GM-A2DA TCGA-GM-A2DB TCGA-GM-A2DC TCGA-GM-A2DD TCGA-GM-A2DH TCGA-GM-A2DI 
      194.27        53.10        53.52        43.04        42.28        61.91 
TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NW TCGA-GM-A3NY 
       62.33        90.81        77.33        53.33        98.04        24.43 
TCGA-GM-A3XN 
       53.92 

$subtype2
TCGA-A1-A0SG TCGA-A1-A0SQ TCGA-A2-A04N TCGA-A2-A0CW TCGA-A2-A1FV TCGA-A2-A1FW 
       14.24        18.18       103.66        57.53        15.12         7.27 
TCGA-A2-A1FX TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25E TCGA-A2-A25F 
       30.74        12.23         8.48         9.37        82.55         3.72 
TCGA-A7-A13F TCGA-A7-A3IY TCGA-A7-A3J0 TCGA-A7-A3RF TCGA-AC-A23C TCGA-AC-A23H 
        6.44         4.96         2.50         1.78         0.95         2.66 
TCGA-AC-A3YJ TCGA-AO-A03V TCGA-AO-A12B TCGA-AO-A12H TCGA-AO-A1KQ TCGA-AQ-A1H2 
        1.28        29.13        77.56        28.34        49.94         7.56 
TCGA-AR-A1AS TCGA-AR-A24H TCGA-AR-A24Z TCGA-AR-A250 TCGA-B6-A1KC TCGA-BH-A0AU 
       40.83       109.58        51.75        56.12        43.59        24.53 
TCGA-BH-A0BP TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0HA TCGA-BH-A0HL TCGA-BH-A18L 
       48.69        42.90        45.80        28.14         2.37        26.66 
TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A1EN TCGA-BH-A1ES TCGA-BH-A1F5 TCGA-BH-A1F8 
       37.74        30.28        67.46       113.82        89.16        24.62 
TCGA-BH-A1FG TCGA-BH-A1FM TCGA-BH-A1FR TCGA-BH-A204 TCGA-C8-A1HK TCGA-C8-A1HL 
      122.89        45.63       144.59        83.31         0.23         0.07 
TCGA-C8-A1HM TCGA-C8-A1HN TCGA-C8-A278 TCGA-C8-A27A TCGA-C8-A3M8 TCGA-D8-A13Y 
        0.20         0.07         0.03        12.20         0.23         8.68 
TCGA-D8-A140 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JI TCGA-D8-A1JJ 
        0.89         8.42         8.15         0.59         0.69         9.01 
TCGA-D8-A1JN TCGA-D8-A1JT TCGA-D8-A1X6 TCGA-D8-A1XA TCGA-D8-A1XC TCGA-D8-A1XD 
        7.13         4.04         7.76         9.01         2.66         5.10 
TCGA-D8-A1XF TCGA-D8-A1XT TCGA-D8-A1XV TCGA-D8-A1Y3 TCGA-D8-A27E TCGA-E2-A10A 
        6.48         6.35         4.80         4.08         5.98        11.57 
TCGA-E2-A14O TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A152 TCGA-E2-A155 TCGA-E2-A156 
       38.53        27.42        29.26        19.33        18.18        15.81 
TCGA-E2-A15A TCGA-E2-A15K TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A1IE TCGA-E2-A1L7 
       16.50         1.12        10.85         9.01        32.32        20.81 
TCGA-E2-A1LS TCGA-E9-A1R4 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RE TCGA-E9-A1RF 
        7.86         0.95         2.76         1.12         1.55         1.25 
TCGA-E9-A1RG TCGA-E9-A245 TCGA-E9-A24A TCGA-EW-A1J1 TCGA-EW-A1J6 TCGA-EW-A1OX 
        1.15         0.82         0.33         9.27        19.56        18.48 
TCGA-EW-A1P0 TCGA-EW-A1P5 TCGA-EW-A1PC TCGA-EW-A2FS TCGA-EW-A2FW TCGA-GM-A2DM 
       36.85        12.00         6.12        38.56         6.25        76.64 

$subtype3
TCGA-A1-A0SB TCGA-A2-A04U TCGA-A2-A0CL TCGA-A2-A1G1 TCGA-A2-A3XV TCGA-A2-A3XX 
        8.52        22.03        60.07        12.20        14.07        38.40 
TCGA-A2-A3Y0 TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26G 
       28.21        12.26         8.78         9.44         8.45         6.87 
TCGA-A7-A26I TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AC-A2QJ TCGA-AN-A0AT TCGA-AO-A12D 
        4.01        38.53         1.02         2.27         0.33        64.04 
TCGA-AO-A12F TCGA-AO-A1KR TCGA-AO-A1KS TCGA-AQ-A0Y5 TCGA-AR-A0TS TCGA-AR-A0TY 
       48.36        70.36         0.53         5.62        37.41        55.86 
TCGA-AR-A0U1 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ 
        6.08        75.55        61.84        52.73        43.53        43.04 
TCGA-AR-A1AR TCGA-AR-A1AU TCGA-AR-A1AY TCGA-AR-A24L TCGA-AR-A24Q TCGA-AR-A24S 
       17.19        46.32        20.19        73.02        66.02        62.07 
TCGA-AR-A24U TCGA-AR-A251 TCGA-AR-A254 TCGA-AR-A256 TCGA-AR-A2LR TCGA-B6-A0I1 
       53.36        45.14        39.85        93.83        20.38        77.62 
TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0B7 TCGA-BH-A0BF TCGA-BH-A0BG TCGA-BH-A0BL 
      101.52        38.79        56.98        25.68        24.85        44.02 
TCGA-BH-A0BT TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A18G TCGA-BH-A18Q TCGA-BH-A18T 
       45.57        11.67        48.23         2.01        55.63         7.36 
TCGA-BH-A18U TCGA-BH-A18V TCGA-BH-A1EX TCGA-BH-A1F0 TCGA-BH-A1F6 TCGA-BH-A1FC 
       51.39        51.12        49.58        25.81        97.48       114.12 
TCGA-BH-A1FN TCGA-BH-A1FU TCGA-BH-A202 TCGA-BH-A208 TCGA-BH-A209 TCGA-C8-A1HJ 
       72.07        72.07         0.72        57.83       130.16         0.16 
TCGA-C8-A27B TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1JC 
        0.99         6.90         2.01         5.65         0.07         5.85 
TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1X5 TCGA-D8-A1XK 
        3.16         6.15         3.58         8.71         5.62        10.72 
TCGA-D8-A1XQ TCGA-D8-A1XW TCGA-D8-A1XZ TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M 
        5.82         3.85         3.95         7.46         4.60         4.73 
TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14W TCGA-E2-A14X TCGA-E2-A14Y 
       44.38        16.01        27.78        27.39        22.75        22.62 
TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B6 
       19.43        14.79        16.93        64.57        41.79        11.11 
TCGA-E2-A1II TCGA-E2-A1LA TCGA-E2-A1LB TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI 
       27.95        15.22        31.96        11.51        94.52        90.41 
TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E9-A1RH TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A248 
        8.75        33.34         0.46         1.41         0.66         0.69 
TCGA-EW-A1OW TCGA-EW-A1OY TCGA-EW-A1P4 TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PB 
       15.22        19.50        16.47        20.88         7.86        19.99 
TCGA-EW-A1PH TCGA-EW-A2FR TCGA-EW-A3U0 TCGA-GI-A2C9 TCGA-GM-A2DF TCGA-GM-A3XL 
        4.57        36.82         7.53        23.11        42.71        56.45 

$subtype4
TCGA-A1-A0SD TCGA-A1-A0SF TCGA-A1-A0SI TCGA-A1-A0SN TCGA-A2-A04W TCGA-A2-A0CS 
       14.37        48.10        20.84        39.32        63.06        75.55 
TCGA-A2-A0CV TCGA-A2-A0D3 TCGA-A2-A0ES TCGA-A2-A0EW TCGA-A2-A0T3 TCGA-A2-A1FZ 
       61.48        24.20        32.91        25.32        14.99        13.45 
TCGA-A2-A1G0 TCGA-A2-A1G6 TCGA-A2-A3XZ TCGA-A7-A26E TCGA-A7-A26J TCGA-A7-A2KD 
       12.49         4.34        31.96        13.84         2.20         5.95 
TCGA-AC-A23E TCGA-AC-A2B8 TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AO-A12A TCGA-AO-A1KO 
        2.37         1.45        55.40        36.99        90.54        14.73 
TCGA-AO-A1KP TCGA-AO-A1KT TCGA-AQ-A1H3 TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AN 
       82.62        17.79         5.33        51.22        48.82        43.69 
TCGA-AR-A1AP TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A24M TCGA-AR-A24N 
       39.95        41.82        42.58        35.24        65.42        68.19 
TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24R TCGA-AR-A24T TCGA-AR-A24V TCGA-AR-A24W 
       65.65         0.85        57.37        53.26        54.18        50.96 
TCGA-AR-A24X TCGA-AR-A252 TCGA-AR-A255 TCGA-B6-A0IH TCGA-B6-A0RH TCGA-B6-A0WS 
       48.16        40.64        34.78       112.37       188.98        97.48 
TCGA-B6-A0X0 TCGA-B6-A1KI TCGA-B6-A1KN TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B5 
      129.70        48.10       109.48        28.50        46.92        48.36 
TCGA-BH-A0BO TCGA-BH-A0BQ TCGA-BH-A0BR TCGA-BH-A0BS TCGA-BH-A0BZ TCGA-BH-A0C1 
       35.67        27.16        53.65        53.92        49.05        43.99 
TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DO TCGA-BH-A0DT 
       48.13        31.17        23.44        22.13        17.26        38.47 
TCGA-BH-A0DX TCGA-BH-A0E2 TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0EI TCGA-BH-A0H3 
       47.41        12.36        46.19        32.65        24.43        37.78 
TCGA-BH-A0H5 TCGA-BH-A0HN TCGA-BH-A0W7 TCGA-BH-A18F TCGA-BH-A18I TCGA-BH-A18J 
       35.51        16.96        18.35         8.81         7.23        20.09 
TCGA-BH-A18K TCGA-BH-A18M TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A1EO TCGA-BH-A1ET 
       90.81        72.56        37.51        66.05        91.99        82.85 
TCGA-BH-A1EU TCGA-BH-A1EV TCGA-BH-A1EY TCGA-BH-A1F2 TCGA-BH-A1FB TCGA-BH-A1FE 
       42.28        12.00        17.69        31.53       120.62        74.73 
TCGA-BH-A1FH TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A201 TCGA-C8-A137 TCGA-C8-A138 
       36.92        63.35        55.00         6.87         0.85         0.23 
TCGA-C8-A1HI TCGA-D8-A141 TCGA-D8-A146 TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JH 
        0.07         3.72        11.31         8.98         1.87         9.34 
TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JU TCGA-D8-A1X7 TCGA-D8-A1XB TCGA-D8-A1XG 
        5.49         3.45         3.48         2.79         6.61         6.44 
TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XU TCGA-D8-A1XY TCGA-D8-A1Y0 
        7.96         5.52         1.64         4.90         2.66         5.46 
TCGA-D8-A1Y1 TCGA-D8-A27P TCGA-E2-A14Q TCGA-E2-A14V TCGA-E2-A153 TCGA-E2-A154 
        3.78         0.76        32.02        24.59        19.27        10.68 
TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15I TCGA-E2-A15J 
       16.31        10.36        10.36         1.38        13.51        15.22 
TCGA-E2-A15L TCGA-E2-A15M TCGA-E2-A15O TCGA-E2-A15P TCGA-E2-A15T TCGA-E2-A1B1 
       10.88         7.69        12.99        10.36         8.78        44.75 
TCGA-E2-A1B4 TCGA-E2-A1B5 TCGA-E2-A1BC TCGA-E2-A1BD TCGA-E2-A1IF TCGA-E2-A1IG 
       29.95        25.45         9.76        10.42        31.43        24.82 
TCGA-E2-A1IH TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO 
       21.63        23.84        17.03         0.46        12.89        14.73 
TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E9-A1R5 TCGA-E9-A1RA 
        4.18        43.13        33.37        12.76         1.38         0.95 
TCGA-E9-A1RC TCGA-E9-A1RI TCGA-E9-A227 TCGA-E9-A247 TCGA-E9-A249 TCGA-EW-A1IW 
       40.37         1.58         0.79         0.39         0.92         8.28 
TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1J2 TCGA-EW-A1J3 TCGA-EW-A1J5 
       35.57         8.48         8.55         4.57         8.28         7.46 
TCGA-EW-A1OV TCGA-EW-A1OZ TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1P6 TCGA-EW-A1PD 
       17.16        30.94        30.21        32.45        10.26         5.72 
TCGA-EW-A1PE TCGA-EW-A1PF TCGA-EW-A1PG 
        3.48         4.57        28.77 

subtype1 subtype2 subtype3 subtype4 
    0.03     0.03     0.07     0.07 
subtype1 subtype2 subtype3 subtype4 
  194.27   144.59   130.16   188.98 
subtype1 subtype2 subtype3 subtype4 
    9.40    10.11    20.63    21.63 
[1] "0.0 - 194.3 (9.4)"  "0.0 - 144.6 (10.1)" "0.1 - 130.2 (20.6)"
[4] "0.1 - 189.0 (21.6)"
  [1] "subtype3" "subtype4" "subtype4" "subtype2" "subtype4" "subtype4"
  [7] "subtype2" "subtype2" "subtype3" "subtype4" "subtype1" "subtype3"
 [13] "subtype1" "subtype4" "subtype4" "subtype2" "subtype4" "subtype4"
 [19] "subtype4" "subtype4" "subtype2" "subtype2" "subtype2" "subtype4"
 [25] "subtype4" "subtype3" "subtype2" "subtype4" "subtype1" "subtype1"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
 [37] "subtype1" "subtype3" "subtype3" "subtype4" "subtype3" "subtype3"
 [43] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype4"
 [49] "subtype3" "subtype3" "subtype1" "subtype3" "subtype4" "subtype4"
 [55] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
 [61] "subtype4" "subtype1" "subtype2" "subtype4" "subtype3" "subtype1"
 [67] "subtype1" "subtype4" "subtype4" "subtype1" "subtype1" "subtype1"
 [73] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
 [85] "subtype2" "subtype4" "subtype2" "subtype3" "subtype3" "subtype2"
 [91] "subtype4" "subtype4" "subtype2" "subtype3" "subtype3" "subtype4"
 [97] "subtype3" "subtype2" "subtype4" "subtype3" "subtype3" "subtype3"
[103] "subtype3" "subtype3" "subtype3" "subtype4" "subtype4" "subtype4"
[109] "subtype3" "subtype4" "subtype3" "subtype3" "subtype2" "subtype4"
[115] "subtype3" "subtype4" "subtype4" "subtype1" "subtype3" "subtype2"
[121] "subtype1" "subtype3" "subtype4" "subtype4" "subtype4" "subtype4"
[127] "subtype3" "subtype4" "subtype3" "subtype4" "subtype3" "subtype4"
[133] "subtype4" "subtype4" "subtype2" "subtype2" "subtype3" "subtype4"
[139] "subtype3" "subtype4" "subtype3" "subtype1" "subtype1" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype3" "subtype4" "subtype4" "subtype1" "subtype4" "subtype4"
[157] "subtype2" "subtype3" "subtype4" "subtype4" "subtype1" "subtype2"
[163] "subtype3" "subtype4" "subtype4" "subtype4" "subtype1" "subtype3"
[169] "subtype3" "subtype3" "subtype3" "subtype4" "subtype2" "subtype4"
[175] "subtype4" "subtype4" "subtype3" "subtype3" "subtype4" "subtype4"
[181] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[187] "subtype3" "subtype4" "subtype4" "subtype1" "subtype4" "subtype4"
[193] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype2"
[199] "subtype2" "subtype4" "subtype4" "subtype4" "subtype3" "subtype4"
[205] "subtype4" "subtype4" "subtype2" "subtype4" "subtype2" "subtype2"
[211] "subtype3" "subtype4" "subtype4" "subtype3" "subtype3" "subtype3"
[217] "subtype2" "subtype4" "subtype2" "subtype4" "subtype4" "subtype4"
[223] "subtype1" "subtype3" "subtype4" "subtype3" "subtype4" "subtype2"
[229] "subtype3" "subtype2" "subtype4" "subtype3" "subtype4" "subtype2"
[235] "subtype4" "subtype4" "subtype4" "subtype2" "subtype3" "subtype2"
[241] "subtype3" "subtype4" "subtype3" "subtype1" "subtype2" "subtype3"
[247] "subtype3" "subtype1" "subtype1" "subtype4" "subtype4" "subtype4"
[253] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[259] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[265] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[271] "subtype2" "subtype3" "subtype2" "subtype4" "subtype3" "subtype3"
[277] "subtype1" "subtype4" "subtype3" "subtype2" "subtype2" "subtype2"
[283] "subtype3" "subtype4" "subtype4" "subtype3" "subtype3" "subtype4"
[289] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype4"
[295] "subtype4" "subtype2" "subtype4" "subtype3" "subtype2" "subtype4"
[301] "subtype1" "subtype1" "subtype2" "subtype4" "subtype2" "subtype2"
[307] "subtype2" "subtype4" "subtype1" "subtype3" "subtype1" "subtype1"
[313] "subtype4" "subtype3" "subtype4" "subtype4" "subtype2" "subtype4"
[319] "subtype2" "subtype3" "subtype4" "subtype3" "subtype4" "subtype4"
[325] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[331] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
[337] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[343] "subtype2" "subtype3" "subtype4" "subtype3" "subtype2" "subtype2"
[349] "subtype1" "subtype4" "subtype3" "subtype3" "subtype3" "subtype1"
[355] "subtype3" "subtype2" "subtype4" "subtype4" "subtype2" "subtype2"
[361] "subtype3" "subtype3" "subtype2" "subtype4" "subtype4" "subtype1"
[367] "subtype1" "subtype4" "subtype4" "subtype4" "subtype4" "subtype2"
[373] "subtype4" "subtype4" "subtype4" "subtype4" "subtype2" "subtype2"
[379] "subtype4" "subtype3" "subtype3" "subtype4" "subtype4" "subtype4"
[385] "subtype3" "subtype4" "subtype4" "subtype2" "subtype4" "subtype4"
[391] "subtype4" "subtype3" "subtype4" "subtype4" "subtype4" "subtype4"
[397] "subtype4" "subtype4" "subtype4" "subtype2" "subtype4" "subtype4"
[403] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[409] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[415] "subtype1" "subtype1" "subtype2" "subtype4" "subtype2" "subtype2"
[421] "subtype4" "subtype1" "subtype4" "subtype1" "subtype2" "subtype2"
[427] "subtype2" "subtype3" "subtype4" "subtype1" "subtype4" "subtype3"
[433] "subtype3" "subtype2" "subtype4" "subtype3" "subtype4" "subtype2"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype4"
[445] "subtype4" "subtype4" "subtype2" "subtype4" "subtype4" "subtype4"
[451] "subtype2" "subtype4" "subtype3" "subtype2" "subtype3" "subtype4"
[457] "subtype2" "subtype4" "subtype4" "subtype3" "subtype2" "subtype4"
[463] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype4"
[469] "subtype4" "subtype4" "subtype4" "subtype3" "subtype3" "subtype2"
[475] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[481] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[487] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[493] "subtype1" "subtype1" "subtype3" "subtype1"
  [1] "subtype3" "subtype4" "subtype4" "subtype2" "subtype4" "subtype4"
  [7] "subtype2" "subtype2" "subtype3" "subtype4" "subtype1" "subtype3"
 [13] "subtype1" "subtype4" "subtype4" "subtype2" "subtype4" "subtype4"
 [19] "subtype4" "subtype4" "subtype2" "subtype2" "subtype2" "subtype4"
 [25] "subtype4" "subtype3" "subtype2" "subtype4" "subtype1" "subtype1"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
 [37] "subtype1" "subtype3" "subtype3" "subtype4" "subtype3" "subtype3"
 [43] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype4"
 [49] "subtype3" "subtype3" "subtype1" "subtype3" "subtype4" "subtype4"
 [55] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
 [61] "subtype4" "subtype1" "subtype2" "subtype4" "subtype3" "subtype1"
 [67] "subtype1" "subtype4" "subtype4" "subtype1" "subtype1" "subtype1"
 [73] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
 [85] "subtype2" "subtype4" "subtype2" "subtype3" "subtype3" "subtype2"
 [91] "subtype4" "subtype4" "subtype2" "subtype3" "subtype3" "subtype4"
 [97] "subtype3" "subtype2" "subtype4" "subtype3" "subtype3" "subtype3"
[103] "subtype3" "subtype3" "subtype3" "subtype4" "subtype4" "subtype4"
[109] "subtype3" "subtype4" "subtype3" "subtype3" "subtype2" "subtype4"
[115] "subtype3" "subtype4" "subtype4" "subtype1" "subtype3" "subtype2"
[121] "subtype1" "subtype3" "subtype4" "subtype4" "subtype4" "subtype4"
[127] "subtype3" "subtype4" "subtype3" "subtype4" "subtype3" "subtype4"
[133] "subtype4" "subtype4" "subtype2" "subtype2" "subtype3" "subtype4"
[139] "subtype3" "subtype4" "subtype3" "subtype1" "subtype1" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype3" "subtype4" "subtype4" "subtype1" "subtype4" "subtype4"
[157] "subtype2" "subtype3" "subtype4" "subtype4" "subtype1" "subtype2"
[163] "subtype3" "subtype4" "subtype4" "subtype4" "subtype1" "subtype3"
[169] "subtype3" "subtype3" "subtype3" "subtype4" "subtype2" "subtype4"
[175] "subtype4" "subtype4" "subtype3" "subtype3" "subtype4" "subtype4"
[181] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[187] "subtype3" "subtype4" "subtype4" "subtype1" "subtype4" "subtype4"
[193] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype2"
[199] "subtype2" "subtype4" "subtype4" "subtype4" "subtype3" "subtype4"
[205] "subtype4" "subtype4" "subtype2" "subtype4" "subtype2" "subtype2"
[211] "subtype3" "subtype4" "subtype4" "subtype3" "subtype3" "subtype3"
[217] "subtype2" "subtype4" "subtype2" "subtype4" "subtype4" "subtype4"
[223] "subtype1" "subtype3" "subtype4" "subtype3" "subtype4" "subtype2"
[229] "subtype3" "subtype2" "subtype4" "subtype3" "subtype4" "subtype2"
[235] "subtype4" "subtype4" "subtype4" "subtype2" "subtype3" "subtype2"
[241] "subtype3" "subtype4" "subtype3" "subtype1" "subtype2" "subtype3"
[247] "subtype3" "subtype1" "subtype1" "subtype4" "subtype4" "subtype4"
[253] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[259] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[265] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[271] "subtype2" "subtype3" "subtype2" "subtype4" "subtype3" "subtype3"
[277] "subtype1" "subtype4" "subtype3" "subtype2" "subtype2" "subtype2"
[283] "subtype3" "subtype4" "subtype4" "subtype3" "subtype3" "subtype4"
[289] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype4"
[295] "subtype4" "subtype2" "subtype4" "subtype3" "subtype2" "subtype4"
[301] "subtype1" "subtype1" "subtype2" "subtype4" "subtype2" "subtype2"
[307] "subtype2" "subtype4" "subtype1" "subtype3" "subtype1" "subtype1"
[313] "subtype4" "subtype3" "subtype4" "subtype4" "subtype2" "subtype4"
[319] "subtype2" "subtype3" "subtype4" "subtype3" "subtype4" "subtype4"
[325] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[331] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
[337] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[343] "subtype2" "subtype3" "subtype4" "subtype3" "subtype2" "subtype2"
[349] "subtype1" "subtype4" "subtype3" "subtype3" "subtype3" "subtype1"
[355] "subtype3" "subtype2" "subtype4" "subtype4" "subtype2" "subtype2"
[361] "subtype3" "subtype3" "subtype2" "subtype4" "subtype4" "subtype1"
[367] "subtype1" "subtype4" "subtype4" "subtype4" "subtype4" "subtype2"
[373] "subtype4" "subtype4" "subtype4" "subtype4" "subtype2" "subtype2"
[379] "subtype4" "subtype3" "subtype3" "subtype4" "subtype4" "subtype4"
[385] "subtype3" "subtype4" "subtype4" "subtype2" "subtype4" "subtype4"
[391] "subtype4" "subtype3" "subtype4" "subtype4" "subtype4" "subtype4"
[397] "subtype4" "subtype4" "subtype4" "subtype2" "subtype4" "subtype4"
[403] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[409] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[415] "subtype1" "subtype1" "subtype2" "subtype4" "subtype2" "subtype2"
[421] "subtype4" "subtype1" "subtype4" "subtype1" "subtype2" "subtype2"
[427] "subtype2" "subtype3" "subtype4" "subtype1" "subtype4" "subtype3"
[433] "subtype3" "subtype2" "subtype4" "subtype3" "subtype4" "subtype2"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype4"
[445] "subtype4" "subtype4" "subtype2" "subtype4" "subtype4" "subtype4"
[451] "subtype2" "subtype4" "subtype3" "subtype2" "subtype3" "subtype4"
[457] "subtype2" "subtype4" "subtype4" "subtype3" "subtype2" "subtype4"
[463] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype4"
[469] "subtype4" "subtype4" "subtype4" "subtype3" "subtype3" "subtype2"
[475] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[481] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[487] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[493] "subtype1" "subtype1" "subtype3" "subtype1"
  [1] "subtype3" "subtype4" "subtype4" "subtype2" "subtype4" "subtype4"
  [7] "subtype2" "subtype2" "subtype3" "subtype4" "subtype1" "subtype3"
 [13] "subtype1" "subtype4" "subtype4" "subtype2" "subtype4" "subtype4"
 [19] "subtype4" "subtype4" "subtype2" "subtype2" "subtype2" "subtype4"
 [25] "subtype4" "subtype3" "subtype2" "subtype4" "subtype1" "subtype1"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
 [37] "subtype1" "subtype3" "subtype3" "subtype4" "subtype3" "subtype3"
 [43] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype4"
 [49] "subtype3" "subtype3" "subtype1" "subtype3" "subtype4" "subtype4"
 [55] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
 [61] "subtype4" "subtype1" "subtype2" "subtype4" "subtype3" "subtype1"
 [67] "subtype1" "subtype4" "subtype4" "subtype1" "subtype1" "subtype1"
 [73] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
 [85] "subtype2" "subtype4" "subtype2" "subtype3" "subtype3" "subtype2"
 [91] "subtype4" "subtype4" "subtype2" "subtype3" "subtype3" "subtype4"
 [97] "subtype3" "subtype2" "subtype4" "subtype3" "subtype3" "subtype3"
[103] "subtype3" "subtype3" "subtype3" "subtype4" "subtype4" "subtype4"
[109] "subtype3" "subtype4" "subtype3" "subtype3" "subtype2" "subtype4"
[115] "subtype3" "subtype4" "subtype4" "subtype1" "subtype3" "subtype2"
[121] "subtype1" "subtype3" "subtype4" "subtype4" "subtype4" "subtype4"
[127] "subtype3" "subtype4" "subtype3" "subtype4" "subtype3" "subtype4"
[133] "subtype4" "subtype4" "subtype2" "subtype2" "subtype3" "subtype4"
[139] "subtype3" "subtype4" "subtype3" "subtype1" "subtype1" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype3" "subtype4" "subtype4" "subtype1" "subtype4" "subtype4"
[157] "subtype2" "subtype3" "subtype4" "subtype4" "subtype1" "subtype2"
[163] "subtype3" "subtype4" "subtype4" "subtype4" "subtype1" "subtype3"
[169] "subtype3" "subtype3" "subtype3" "subtype4" "subtype2" "subtype4"
[175] "subtype4" "subtype4" "subtype3" "subtype3" "subtype4" "subtype4"
[181] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[187] "subtype3" "subtype4" "subtype4" "subtype1" "subtype4" "subtype4"
[193] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype2"
[199] "subtype2" "subtype4" "subtype4" "subtype4" "subtype3" "subtype4"
[205] "subtype4" "subtype4" "subtype2" "subtype4" "subtype2" "subtype2"
[211] "subtype3" "subtype4" "subtype4" "subtype3" "subtype3" "subtype3"
[217] "subtype2" "subtype4" "subtype2" "subtype4" "subtype4" "subtype4"
[223] "subtype1" "subtype3" "subtype4" "subtype3" "subtype4" "subtype2"
[229] "subtype3" "subtype2" "subtype4" "subtype3" "subtype4" "subtype2"
[235] "subtype4" "subtype4" "subtype4" "subtype2" "subtype3" "subtype2"
[241] "subtype3" "subtype4" "subtype3" "subtype1" "subtype2" "subtype3"
[247] "subtype3" "subtype1" "subtype1" "subtype4" "subtype4" "subtype4"
[253] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[259] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[265] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[271] "subtype2" "subtype3" "subtype2" "subtype4" "subtype3" "subtype3"
[277] "subtype1" "subtype4" "subtype3" "subtype2" "subtype2" "subtype2"
[283] "subtype3" "subtype4" "subtype4" "subtype3" "subtype3" "subtype4"
[289] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype4"
[295] "subtype4" "subtype2" "subtype4" "subtype3" "subtype2" "subtype4"
[301] "subtype1" "subtype1" "subtype2" "subtype4" "subtype2" "subtype2"
[307] "subtype2" "subtype4" "subtype1" "subtype3" "subtype1" "subtype1"
[313] "subtype4" "subtype3" "subtype4" "subtype4" "subtype2" "subtype4"
[319] "subtype2" "subtype3" "subtype4" "subtype3" "subtype4" "subtype4"
[325] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[331] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
[337] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[343] "subtype2" "subtype3" "subtype4" "subtype3" "subtype2" "subtype2"
[349] "subtype1" "subtype4" "subtype3" "subtype3" "subtype3" "subtype1"
[355] "subtype3" "subtype2" "subtype4" "subtype4" "subtype2" "subtype2"
[361] "subtype3" "subtype3" "subtype2" "subtype4" "subtype4" "subtype1"
[367] "subtype1" "subtype4" "subtype4" "subtype4" "subtype4" "subtype2"
[373] "subtype4" "subtype4" "subtype4" "subtype4" "subtype2" "subtype2"
[379] "subtype4" "subtype3" "subtype3" "subtype4" "subtype4" "subtype4"
[385] "subtype3" "subtype4" "subtype4" "subtype2" "subtype4" "subtype4"
[391] "subtype4" "subtype3" "subtype4" "subtype4" "subtype4" "subtype4"
[397] "subtype4" "subtype4" "subtype4" "subtype2" "subtype4" "subtype4"
[403] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[409] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[415] "subtype1" "subtype1" "subtype2" "subtype4" "subtype2" "subtype2"
[421] "subtype4" "subtype1" "subtype4" "subtype1" "subtype2" "subtype2"
[427] "subtype2" "subtype3" "subtype4" "subtype1" "subtype4" "subtype3"
[433] "subtype3" "subtype2" "subtype4" "subtype3" "subtype4" "subtype2"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype4"
[445] "subtype4" "subtype4" "subtype2" "subtype4" "subtype4" "subtype4"
[451] "subtype2" "subtype4" "subtype3" "subtype2" "subtype3" "subtype4"
[457] "subtype2" "subtype4" "subtype4" "subtype3" "subtype2" "subtype4"
[463] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype4"
[469] "subtype4" "subtype4" "subtype4" "subtype3" "subtype3" "subtype2"
[475] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[481] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[487] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[493] "subtype1" "subtype1" "subtype3" "subtype1"
D12V2, continuous
D12V3, binary
          cls
clus         0   1
  subtype1 106   0
  subtype2 121   2
  subtype3 131   1
  subtype4 182   3
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  106    0
  subtype2  121    2
  subtype3  131    1
  subtype4  182    3
        clus
vv       subtype1 subtype2 subtype3 subtype4
  FEMALE      106      121      131      182
  MALE          0        2        1        3
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                            50                             51
  subtype2                            96                              4
  subtype3                           118                              2
  subtype4                           141                             28
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   0                                1
  subtype2                   0                                7
  subtype3                   4                                1
  subtype4                   0                                8
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  2              2
  subtype2                  7              9
  subtype3                  0              7
  subtype4                  1              7
D12V4, multiclass
D12V5, binary
          cls
clus         0   1
  subtype1  13  93
  subtype2  30  93
  subtype3  32 100
  subtype4  36 149
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   13   93
  subtype2   30   93
  subtype3   32  100
  subtype4   36  149
     clus
vv    subtype1 subtype2 subtype3 subtype4
  NO        13       30       32       36
  YES       93       93      100      149
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0  85   0  21
  subtype2        0 110   0  13
  subtype3        0 118   0  14
  subtype4        2 158   3  22
D12V6, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N0 (MOL+) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3B
  subtype1 29       3      13         0 13  16   3   0    4  4   8  6   7   0
  subtype2 38       1      13         0 21  21   3   0    3  9   7  1   2   0
  subtype3 60       2      11         0 17  10   5   1    3  8  10  1   3   1
  subtype4 70       2      15         1 24  30   7   1   10  8   8  2   4   1
          vv
clus       NX
  subtype1  0
  subtype2  4
  subtype3  0
  subtype4  2
D12V7, multiclass
D12V8, continuous
D12V9, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      13        3        0        5        30        25         2
  subtype2       9       11        0        0        40        34         0
  subtype3      12        3        0        2        59        28         0
  subtype4      30       20        2        1        55        38         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE X
  subtype1         13          3         12        0       0
  subtype2         21          4          3        0       1
  subtype3         18          2          5        0       2
  subtype4         25          3          6        3       2
D12V10, multiclass
                                    V1.D 
                         "Time to Death" 
                                      V2 
                                   "AGE" 
                                      V3 
                                "GENDER" 
                                      V4 
                     "HISTOLOGICAL.TYPE" 
                                      V5 
"RADIATIONS.RADIATION.REGIMENINDICATION" 
                                      V6 
                    "DISTANT.METASTASIS" 
                                      V7 
                 "LYMPH.NODE.METASTASIS" 
                                      V8 
                 "NUMBER.OF.LYMPH.NODES" 
                                      V9 
                       "TUMOR.STAGECODE" 
                                     V10 
                 "NEOPLASM.DISEASESTAGE" 
> q(save="no")
