
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_TopgenesforCluster.36.4074/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_TopgenesforCluster.36.4074/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/COAD-TP/3527696/COAD-TP.meth.by_max_stddev.data.txt", "-u6348", "-ooutputprefix")
Cluster size 6348 broken into 3504 2844 
Cluster size 3504 broken into 1864 1640 
Cluster size 1864 broken into 1126 738 
Done cluster 1126 
Done cluster 738 
Done cluster 1864 
Cluster size 1640 broken into 813 827 
Done cluster 813 
Done cluster 827 
Done cluster 1640 
Done cluster 3504 
Cluster size 2844 broken into 1207 1637 
Done cluster 1207 
Cluster size 1637 broken into 908 729 
Done cluster 908 
Done cluster 729 
Done cluster 1637 
Done cluster 2844 
> q(save="no")
